1001 Genomes
A Catalog of Arabidopsis thaliana Genetic Variation
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MPICWang2013 - 343 Arabidopsis thaliana accessions

To discover sequence differences responsible for adaptation to diverse environments across the native range of Arabidopsis thaliana, the Max Planck Institute for Developmental Biology (MPI) and Monsanto Company sequenced 343 wild inbred accessions from 22 countries, with 9- to 112-fold genome coverage using Illumina's sequencing-by-synthesis (SBS) technology.

Paired-end short reads (100 bp) were analyzed using our software pipeline SHORE to identify the SNPS and 1-3bp deletions.

Regional distribution


We collected strains from 22 countries:

Number of Strains Region
87ESP
46GER
35FRA
29UK
31RUS
21USA
23ITA
17CZE
14BUL
6POR
6ROU
3GEO
6ARM
4SRB
3SVK
3GRC
2CRO
2AUT
1UZB
1SWE
1SUI
1MAR
1#N/A

For more information please see here.

Contact

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