Arabidopsis thaliana assemblies
Here we provide the genome sequences of four Arabidopsis thaliana accessions. The sequences are assembled from Illumina sequence reads only accounting for ~50 to 200x genome coverage. We used two to three different sequencing libraries per genome at varying insert size lengths (200bp to 5kb).
The assembly process followed a homology-guided strategy in order to make use of the Col-0 reference sequence, though excluding the centromeres (as defined by Clark et al, Science, 2007).
Please read our data usage policy carefully.
Downloads
| Institute | Sample | Min Contig Len | Download Links |
|---|---|---|---|
| MPI | C24 | 500 | Assemblies | SNP Marker |
| MPI | Bur-0 | 500 | Assemblies | SNP Marker |
| MPI | Kro-0 | 500 | Assemblies | SNP Marker |
| MPI | Ler-1 | 500 | Assemblies | SNP Marker |
Contact
For any questions concerning the data contact Korbinian Schneeberger, for any problems downloading/accessing the data contact Joffrey Fitz.