1001 Genomes
A Catalog of Arabidopsis thaliana Genetic Variation
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Arabidopsis thaliana assemblies

Here we provide the genome sequences of four Arabidopsis thaliana accessions. The sequences are assembled from Illumina sequence reads only accounting for ~50 to 200x genome coverage. We used two to three different sequencing libraries per genome at varying insert size lengths (200bp to 5kb).

The assembly process followed a homology-guided strategy in order to make use of the Col-0 reference sequence, though excluding the centromeres (as defined by Clark et al, Science, 2007).

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Downloads

Institute Sample Min Contig Len Download Links
MPI C24 500 Assemblies | SNP Marker
MPI Bur-0 500 Assemblies | SNP Marker
MPI Kro-0 500 Assemblies | SNP Marker
MPI Ler-1 500 Assemblies | SNP Marker


Contact

For any questions concerning the data contact Korbinian Schneeberger, for any problems downloading/accessing the data contact Joffrey Fitz.