Rue3-1-31	1	2569	2570	1	A	core_nonrep	4	1	1
Rue3-1-31	1	6324	6325	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	9214	9215	1	A	core_nonrep	3	1	1
Rue3-1-31	1	10403	10404	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20081	20082	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	21891	21892	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	1	22550	22551	1	A	core_nonrep	11	0.75	1
Rue3-1-31	1	39316	39317	1	A	nonrep	4	0.8	1
Rue3-1-31	1	41458	41459	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	49817	49818	1	T	core_nonrep	3	1	1
Rue3-1-31	1	50030	50031	1	C	nonrep	4	0.8	1
Rue3-1-31	1	56064	56065	1	C	core_nonrep	3	1	1.75
Rue3-1-31	1	66026	66027	1	C	core_nonrep	4	1	1
Rue3-1-31	1	107660	107661	2	AA	core_nonrep	8	0.777778	1
Rue3-1-31	1	108201	108202	1	A	nonrep	9	0.75	1
Rue3-1-31	1	114108	114109	1	T	nonrep	3	1	1.25
Rue3-1-31	1	128368	128369	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	1	146457	146458	1	A	core_nonrep	6	1	1
Rue3-1-31	1	156382	156383	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	1	168199	168200	1	G	core_nonrep	6	1	1
Rue3-1-31	1	170257	170258	1	C	core_nonrep	8	1	1
Rue3-1-31	1	174864	174865	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	175451	175452	1	T	core_nonrep	9	0.8	1
Rue3-1-31	1	187068	187069	2	TT	core_nonrep	6	0.833333	1
Rue3-1-31	1	195520	195521	1	C	core_nonrep	4	1	1
Rue3-1-31	1	214644	214645	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	221065	221066	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	223343	223344	2	AT	core_nonrep	6	1	1
Rue3-1-31	1	228732	228733	1	C	core_nonrep	9	0.75	1
Rue3-1-31	1	230220	230221	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	237183	237184	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	247342	247343	2	AT	core_nonrep	13	1	1
Rue3-1-31	1	247906	247907	1	C	core_nonrep	6	1	1
Rue3-1-31	1	249431	249432	1	T	core_nonrep	13	1	1
Rue3-1-31	1	251829	251830	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	1	252651	252652	1	T	core_nonrep	6	1	1
Rue3-1-31	1	267235	267236	1	C	core_nonrep	11	1	1
Rue3-1-31	1	268358	268359	2	AA	core_nonrep	11	0.714286	1
Rue3-1-31	1	270149	270150	1	C	core_nonrep	10	1	1
Rue3-1-31	1	276294	276295	1	T	core_nonrep	16	1	1
Rue3-1-31	1	281694	281695	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	1	288072	288073	1	A	core_nonrep	17	1	1
Rue3-1-31	1	291636	291637	1	G	nonrep	4	1	1
Rue3-1-31	1	298459	298460	1	T	nonrep	4	0.8	1
Rue3-1-31	1	304333	304334	1	A	core_nonrep	26	1	1
Rue3-1-31	1	309588	309589	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	349533	349534	1	T	core_nonrep	10	1	1
Rue3-1-31	1	349534	349535	1	C	core_nonrep	10	1	1
Rue3-1-31	1	352239	352240	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	352241	352242	1	G	core_nonrep	7	1	1
Rue3-1-31	1	367417	367418	2	AA	core_nonrep	9	0.727273	1
Rue3-1-31	1	370360	370361	2	GG	nonrep	6	0.75	1
Rue3-1-31	1	376320	376321	1	T	core_nonrep	3	1	1
Rue3-1-31	1	377871	377872	1	G	core_nonrep	9	1	1
Rue3-1-31	1	381725	381726	1	A	core_nonrep	12	1	1
Rue3-1-31	1	388643	388644	1	G	core_nonrep	6	1	1
Rue3-1-31	1	389396	389397	1	A	core_nonrep	14	0.75	1
Rue3-1-31	1	389398	389399	2	GT	core_nonrep	14	0.823529	1
Rue3-1-31	1	403352	403353	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	425625	425626	1	C	core_nonrep	10	1	1
Rue3-1-31	1	430012	430013	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	430048	430049	1	A	core_nonrep	5	1	1
Rue3-1-31	1	430695	430696	1	T	nonrep	3	1	1
Rue3-1-31	1	432537	432538	1	C	core_nonrep	3	1	1
Rue3-1-31	1	439001	439002	1	C	core_nonrep	12	1	1
Rue3-1-31	1	442981	442982	1	A	core_nonrep	5	1	1
Rue3-1-31	1	446507	446508	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	460940	460941	1	A	nonrep	3	0.75	1
Rue3-1-31	1	461738	461739	1	A	core_nonrep	5	1	1
Rue3-1-31	1	469288	469289	2	GT	core_nonrep	9	0.888889	1
Rue3-1-31	1	469290	469291	1	C	core_nonrep	11	0.818182	1
Rue3-1-31	1	477560	477561	1	G	core_nonrep	3	1	1
Rue3-1-31	1	478508	478509	1	T	core_nonrep	13	0.857143	1
Rue3-1-31	1	479409	479410	1	G	nonrep	3	1	1
Rue3-1-31	1	479470	479471	1	A	core_nonrep	5	1	1
Rue3-1-31	1	479604	479605	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	484084	484085	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	484601	484602	1	T	core_nonrep	19	0.944444	1
Rue3-1-31	1	492533	492534	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	1	507324	507325	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	515979	515980	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	604387	604388	1	C	core_nonrep	12	1	1
Rue3-1-31	1	634731	634732	1	T	nonrep	3	0.75	1
Rue3-1-31	1	729810	729811	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	812027	812028	1	C	core_nonrep	10	1	1
Rue3-1-31	1	813476	813477	1	T	core_nonrep	15	1	1
Rue3-1-31	1	822524	822525	1	T	core_nonrep	4	1	1
Rue3-1-31	1	827128	827129	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	838261	838262	1	G	core_nonrep	6	1	1
Rue3-1-31	1	844178	844179	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	848084	848085	1	T	core_nonrep	14	0.866667	1
Rue3-1-31	1	850583	850584	2	AC	core_nonrep	16	1	1
Rue3-1-31	1	851441	851442	1	A	core_nonrep	4	1	1
Rue3-1-31	1	851524	851525	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	853937	853938	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	853938	853939	1	C	core_nonrep	5	1	1
Rue3-1-31	1	854092	854093	1	T	core_nonrep	10	1	1
Rue3-1-31	1	860983	860984	1	G	core_nonrep	12	0.909091	1
Rue3-1-31	1	862659	862660	1	A	core_nonrep	13	1	1
Rue3-1-31	1	862883	862884	1	T	core_nonrep	16	0.714286	1
Rue3-1-31	1	863646	863647	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	864333	864334	1	G	core_nonrep	5	1	1
Rue3-1-31	1	864373	864374	1	T	core_nonrep	8	1	1
Rue3-1-31	1	864414	864415	1	T	core_nonrep	9	1	1
Rue3-1-31	1	869554	869555	1	T	core_nonrep	16	0.857143	1
Rue3-1-31	1	871305	871306	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	874462	874463	1	A	core_nonrep	14	0.923077	1.08333
Rue3-1-31	1	880238	880239	1	T	core_nonrep	8	1	1
Rue3-1-31	1	882442	882443	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	1	886544	886545	1	T	core_nonrep	7	1	1
Rue3-1-31	1	895475	895476	1	A	core_nonrep	10	1	1
Rue3-1-31	1	896232	896233	1	A	core_nonrep	19	1	1
Rue3-1-31	1	920604	920605	1	G	core_nonrep	6	1	1
Rue3-1-31	1	923015	923016	1	A	core_nonrep	6	1	1
Rue3-1-31	1	923272	923273	1	T	core_nonrep	5	1	1
Rue3-1-31	1	923285	923286	1	T	core_nonrep	8	1	1
Rue3-1-31	1	925876	925877	1	A	core_nonrep	5	1	1
Rue3-1-31	1	928051	928052	1	A	core_nonrep	11	0.777778	1
Rue3-1-31	1	929594	929595	1	A	core_nonrep	7	1	1
Rue3-1-31	1	931654	931655	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	936008	936009	1	A	core_nonrep	10	1	1
Rue3-1-31	1	956198	956199	1	T	core_nonrep	3	1	1
Rue3-1-31	1	984291	984292	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	1004588	1004589	3	TTT	core_nonrep	7	1	1
Rue3-1-31	1	1007269	1007270	1	T	core_nonrep	6	1	1
Rue3-1-31	1	1012980	1012981	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	1	1044485	1044486	1	T	core_nonrep	10	1	1
Rue3-1-31	1	1046012	1046013	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1066198	1066199	2	TT	core_nonrep	7	0.75	1
Rue3-1-31	1	1088359	1088360	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	1121543	1121544	1	A	core_nonrep	3	1	1
Rue3-1-31	1	1140517	1140518	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	1144866	1144867	1	A	core_nonrep	7	1	1
Rue3-1-31	1	1159161	1159162	1	T	core_nonrep	6	1	1
Rue3-1-31	1	1161485	1161486	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1163765	1163766	1	A	core_nonrep	10	1	1
Rue3-1-31	1	1168660	1168661	1	G	core_nonrep	8	1	1
Rue3-1-31	1	1180425	1180426	1	C	core_nonrep	5	1	1
Rue3-1-31	1	1186351	1186352	1	A	core_nonrep	9	0.9	1
Rue3-1-31	1	1195274	1195275	1	G	core_nonrep	8	1	1.1
Rue3-1-31	1	1195366	1195367	3	ATC	core_nonrep	6	1	1
Rue3-1-31	1	1195422	1195423	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1196118	1196119	1	A	core_nonrep	7	1	1
Rue3-1-31	1	1196256	1196257	1	T	core_nonrep	9	1	1
Rue3-1-31	1	1196334	1196335	1	T	core_nonrep	7	1	1
Rue3-1-31	1	1196335	1196336	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	1196533	1196534	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1206323	1206324	2	TG	core_nonrep	3	1	1
Rue3-1-31	1	1217717	1217718	1	C	core_nonrep	6	1	1
Rue3-1-31	1	1228191	1228192	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	1228192	1228193	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	1246318	1246319	1	A	core_nonrep	14	0.909091	1
Rue3-1-31	1	1246704	1246705	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	1251040	1251041	1	A	core_nonrep	8	1	1
Rue3-1-31	1	1258063	1258064	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	1258736	1258737	1	T	core_nonrep	15	0.909091	1
Rue3-1-31	1	1261828	1261829	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	1266751	1266752	1	T	core_nonrep	12	1	1
Rue3-1-31	1	1272196	1272197	1	C	core_nonrep	11	0.875	1
Rue3-1-31	1	1279215	1279216	1	A	core_nonrep	3	1	1
Rue3-1-31	1	1279222	1279223	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1308527	1308528	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1309869	1309870	1	A	core_nonrep	5	1	1
Rue3-1-31	1	1310496	1310497	1	T	core_nonrep	9	1	1
Rue3-1-31	1	1363746	1363747	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	1389087	1389088	1	A	core_nonrep	7	1	1
Rue3-1-31	1	1417928	1417929	2	TA	core_nonrep	8	1	1
Rue3-1-31	1	1418974	1418975	1	A	core_nonrep	8	1	1
Rue3-1-31	1	1425011	1425012	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1432985	1432986	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	1432986	1432987	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	1432988	1432989	1	G	core_nonrep	7	1	1
Rue3-1-31	1	1445643	1445644	1	G	nonrep	4	1	1
Rue3-1-31	1	1458882	1458883	2	TT	core_nonrep	10	1	1
Rue3-1-31	1	1468740	1468741	2	AG	core_nonrep	4	1	1
Rue3-1-31	1	1481659	1481660	1	G	core_nonrep	7	1	1
Rue3-1-31	1	1495848	1495849	1	T	core_nonrep	6	1	1
Rue3-1-31	1	1496444	1496445	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	1503887	1503888	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1504572	1504573	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	1509555	1509556	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	1517885	1517886	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	1520158	1520159	1	A	core_nonrep	8	0.7	1
Rue3-1-31	1	1520619	1520620	3	GGG	core_nonrep	5	0.8	1
Rue3-1-31	1	1525015	1525016	1	A	core_nonrep	7	1	1.2
Rue3-1-31	1	1528478	1528479	3	AAA	core_nonrep	4	0.8	1
Rue3-1-31	1	1529064	1529065	1	A	core_nonrep	5	1	1
Rue3-1-31	1	1535434	1535435	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	1539300	1539301	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	1540558	1540559	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	1541113	1541114	1	T	core_nonrep	10	1	1
Rue3-1-31	1	1543440	1543441	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1545973	1545974	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	1548102	1548103	1	G	core_nonrep	6	1	1
Rue3-1-31	1	1549255	1549256	1	T	core_nonrep	6	1	1
Rue3-1-31	1	1549269	1549270	1	T	core_nonrep	4	1	1
Rue3-1-31	1	1549674	1549675	1	T	core_nonrep	7	1	1
Rue3-1-31	1	1549675	1549676	1	A	core_nonrep	7	1	1
Rue3-1-31	1	1559710	1559711	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	1570513	1570514	1	A	core_nonrep	6	1	1.36364
Rue3-1-31	1	1592654	1592655	1	T	core_nonrep	4	1	1
Rue3-1-31	1	1593018	1593019	1	A	core_nonrep	5	1	1
Rue3-1-31	1	1597878	1597879	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1601343	1601344	1	T	nonrep	5	0.714286	1
Rue3-1-31	1	1606519	1606520	1	A	core_nonrep	6	1	1
Rue3-1-31	1	1611951	1611952	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1612045	1612046	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1612182	1612183	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	1612712	1612713	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1636001	1636002	1	A	nonrep	3	0.75	1
Rue3-1-31	1	1644349	1644350	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1661379	1661380	2	GG	core_nonrep	16	1	1
Rue3-1-31	1	1667907	1667908	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	1674441	1674442	1	C	core_nonrep	10	0.9	1
Rue3-1-31	1	1680889	1680890	1	C	core_nonrep	7	0.75	1
Rue3-1-31	1	1691302	1691303	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	1692817	1692818	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1693144	1693145	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1696514	1696515	1	T	core_nonrep	4	1	1
Rue3-1-31	1	1697297	1697298	1	A	core_nonrep	5	1	1
Rue3-1-31	1	1697755	1697756	1	C	core_nonrep	13	1	1
Rue3-1-31	1	1705198	1705199	1	G	core_nonrep	3	1	1
Rue3-1-31	1	1705201	1705202	1	A	core_nonrep	3	1	1
Rue3-1-31	1	1729018	1729019	1	A	core_nonrep	6	1	1
Rue3-1-31	1	1752953	1752954	1	A	core_nonrep	7	1	1
Rue3-1-31	1	1772660	1772661	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	1772661	1772662	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	1	1775592	1775593	1	C	core_nonrep	5	1	1
Rue3-1-31	1	1775629	1775630	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1775891	1775892	1	T	core_nonrep	3	1	1
Rue3-1-31	1	1775893	1775894	1	T	nonrep	3	0.75	1
Rue3-1-31	1	1808317	1808318	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	1822385	1822386	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	1823228	1823229	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	1823319	1823320	1	G	core_nonrep	7	1	1
Rue3-1-31	1	1823327	1823328	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1823984	1823985	1	G	core_nonrep	5	1	1
Rue3-1-31	1	1824012	1824013	1	T	core_nonrep	4	1	1
Rue3-1-31	1	1862195	1862196	1	A	core_nonrep	10	0.75	1
Rue3-1-31	1	1875378	1875379	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	1875382	1875383	1	G	core_nonrep	4	1	1
Rue3-1-31	1	1884040	1884041	1	A	core_nonrep	5	1	1
Rue3-1-31	1	1888398	1888399	1	T	core_nonrep	9	1	1
Rue3-1-31	1	1890247	1890248	1	T	core_nonrep	5	1	1
Rue3-1-31	1	1934090	1934091	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	1939001	1939002	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	1941219	1941220	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1946191	1946192	2	TG	core_nonrep	5	1	1
Rue3-1-31	1	1950888	1950889	1	C	core_nonrep	14	1	1
Rue3-1-31	1	1950906	1950907	1	A	core_nonrep	11	1	1
Rue3-1-31	1	1952821	1952822	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	1953243	1953244	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	1954234	1954235	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	1958794	1958795	1	A	core_nonrep	4	1	1
Rue3-1-31	1	1960945	1960946	1	G	core_nonrep	15	1	1
Rue3-1-31	1	1969636	1969637	1	T	core_nonrep	4	1	1
Rue3-1-31	1	1977508	1977509	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	1977867	1977868	1	A	core_nonrep	11	1	1
Rue3-1-31	1	2001043	2001044	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2001469	2001470	1	T	core_nonrep	9	1	1
Rue3-1-31	1	2002726	2002727	1	T	core_nonrep	4	1	1
Rue3-1-31	1	2002776	2002777	1	G	core_nonrep	5	0.714286	1
Rue3-1-31	1	2048802	2048803	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	1	2057224	2057225	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2079708	2079709	1	C	core_nonrep	8	1	1
Rue3-1-31	1	2086564	2086565	1	T	core_nonrep	10	0.75	1
Rue3-1-31	1	2091504	2091505	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2103605	2103606	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2103809	2103810	2	GT	core_nonrep	7	0.8	1
Rue3-1-31	1	2130236	2130237	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2134812	2134813	1	A	core_nonrep	10	1	1
Rue3-1-31	1	2134882	2134883	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	1	2141998	2141999	1	A	core_nonrep	3	1	1
Rue3-1-31	1	2143148	2143149	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	2146373	2146374	1	C	core_nonrep	15	0.928571	1
Rue3-1-31	1	2147843	2147844	2	AT	nonrep	3	0.75	1
Rue3-1-31	1	2167029	2167030	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2168190	2168191	1	A	core_nonrep	14	0.857143	1
Rue3-1-31	1	2173779	2173780	2	CT	core_nonrep	4	1	1
Rue3-1-31	1	2174840	2174841	1	C	nonrep	3	1	1
Rue3-1-31	1	2174844	2174845	1	T	core_nonrep	3	1	1
Rue3-1-31	1	2187643	2187644	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	2187644	2187645	1	G	core_nonrep	6	1	1
Rue3-1-31	1	2191458	2191459	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	2194041	2194042	1	T	core_nonrep	10	1	1
Rue3-1-31	1	2199757	2199758	1	T	core_nonrep	9	1	1
Rue3-1-31	1	2204338	2204339	1	T	core_nonrep	4	1	1
Rue3-1-31	1	2219751	2219752	1	T	core_nonrep	8	1	1
Rue3-1-31	1	2235856	2235857	1	G	nonrep	3	0.75	1
Rue3-1-31	1	2236118	2236119	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2241063	2241064	1	T	core_nonrep	10	0.833333	1
Rue3-1-31	1	2243385	2243386	1	G	core_nonrep	27	1	1
Rue3-1-31	1	2243954	2243955	1	A	core_nonrep	3	1	1
Rue3-1-31	1	2245439	2245440	1	T	core_nonrep	13	0.888889	1
Rue3-1-31	1	2250152	2250153	2	AC	core_nonrep	9	1	1
Rue3-1-31	1	2250530	2250531	1	T	core_nonrep	5	1	1
Rue3-1-31	1	2256360	2256361	1	C	core_nonrep	28	0.884615	1
Rue3-1-31	1	2264546	2264547	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	1	2265421	2265422	1	A	core_nonrep	5	1	1
Rue3-1-31	1	2269590	2269591	1	T	core_nonrep	10	1	1
Rue3-1-31	1	2269737	2269738	1	A	core_nonrep	7	0.7	1
Rue3-1-31	1	2270756	2270757	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	2270956	2270957	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	2273165	2273166	1	T	core_nonrep	13	1	1
Rue3-1-31	1	2277344	2277345	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2278221	2278222	1	T	core_nonrep	16	0.933333	1
Rue3-1-31	1	2280513	2280514	1	A	core_nonrep	7	1	1
Rue3-1-31	1	2284019	2284020	1	A	core_nonrep	11	1	1
Rue3-1-31	1	2293288	2293289	1	T	core_nonrep	8	1	1
Rue3-1-31	1	2295524	2295525	1	A	core_nonrep	3	1	1
Rue3-1-31	1	2302290	2302291	1	A	nonrep	3	0.75	1
Rue3-1-31	1	2318417	2318418	1	T	core_nonrep	12	0.8	1
Rue3-1-31	1	2318834	2318835	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	2319514	2319515	1	T	core_nonrep	13	1	1
Rue3-1-31	1	2625864	2625865	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2632661	2632662	1	A	core_nonrep	24	0.904762	1
Rue3-1-31	1	2632840	2632841	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	1	2646053	2646054	1	C	core_nonrep	11	1	1
Rue3-1-31	1	2646249	2646250	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2658007	2658008	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	2664658	2664659	1	G	core_nonrep	4	1	1
Rue3-1-31	1	2665625	2665626	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	2665964	2665965	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2666298	2666299	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	2681233	2681234	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	2681762	2681763	1	G	core_nonrep	4	1	1
Rue3-1-31	1	2692221	2692222	1	T	core_nonrep	4	1	1
Rue3-1-31	1	2693805	2693806	1	G	core_nonrep	10	1	1
Rue3-1-31	1	2693985	2693986	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	2693986	2693987	1	G	core_nonrep	5	1	1
Rue3-1-31	1	2696895	2696896	1	T	nonrep	3	0.75	1
Rue3-1-31	1	2696896	2696897	2	CA	nonrep	3	0.75	1
Rue3-1-31	1	2697212	2697213	1	C	core_nonrep	9	1	1
Rue3-1-31	1	2700006	2700007	1	A	core_nonrep	13	0.857143	1
Rue3-1-31	1	2701252	2701253	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	2701946	2701947	1	A	core_nonrep	15	1	1
Rue3-1-31	1	2702757	2702758	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	2702951	2702952	1	T	core_nonrep	10	1	1
Rue3-1-31	1	2703984	2703985	1	T	core_nonrep	7	1	1
Rue3-1-31	1	2708293	2708294	1	T	core_nonrep	8	1	1
Rue3-1-31	1	2708345	2708346	1	A	core_nonrep	9	1	1
Rue3-1-31	1	2708361	2708362	1	T	core_nonrep	7	1	1
Rue3-1-31	1	2710714	2710715	1	T	core_nonrep	15	1	1
Rue3-1-31	1	2710908	2710909	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	2711305	2711306	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	2712088	2712089	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	2715021	2715022	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2715201	2715202	1	A	core_nonrep	9	1	1
Rue3-1-31	1	2755362	2755363	1	A	core_nonrep	4	1	1
Rue3-1-31	1	2769733	2769734	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	2773907	2773908	1	T	core_nonrep	5	1	1
Rue3-1-31	1	2777163	2777164	2	CT	core_nonrep	13	1	1
Rue3-1-31	1	2804500	2804501	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2812796	2812797	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2817849	2817850	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	2818232	2818233	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	2818277	2818278	1	T	nonrep	3	0.75	1
Rue3-1-31	1	2821525	2821526	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	2821536	2821537	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	2821634	2821635	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	2821635	2821636	1	G	core_nonrep	11	1	1
Rue3-1-31	1	2825651	2825652	2	TC	core_nonrep	5	1	1
Rue3-1-31	1	2825657	2825658	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2847777	2847778	2	GA	core_nonrep	6	1	1
Rue3-1-31	1	2850748	2850749	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2853417	2853418	1	T	core_nonrep	4	1	1
Rue3-1-31	1	2859039	2859040	1	C	core_nonrep	12	1	1
Rue3-1-31	1	2865308	2865309	1	T	core_nonrep	5	1	1
Rue3-1-31	1	2872218	2872219	1	A	core_nonrep	5	1	1
Rue3-1-31	1	2874281	2874282	1	T	core_nonrep	6	1	1
Rue3-1-31	1	2874374	2874375	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	2877636	2877637	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	2890954	2890955	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	2905258	2905259	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2906064	2906065	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	2908273	2908274	1	A	core_nonrep	10	1	1
Rue3-1-31	1	2911719	2911720	1	G	core_nonrep	7	0.75	1
Rue3-1-31	1	2929299	2929300	1	C	core_nonrep	16	0.928571	1
Rue3-1-31	1	2943037	2943038	1	C	core_nonrep	12	1	1
Rue3-1-31	1	2955967	2955968	1	T	core_nonrep	4	1	1
Rue3-1-31	1	2961981	2961982	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	2962033	2962034	1	A	core_nonrep	9	0.75	1
Rue3-1-31	1	2962297	2962298	1	A	core_nonrep	6	1	1
Rue3-1-31	1	2962351	2962352	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	2962726	2962727	1	C	core_nonrep	7	1	1
Rue3-1-31	1	2963244	2963245	1	T	core_nonrep	9	1	1
Rue3-1-31	1	2986191	2986192	1	A	core_nonrep	8	1	1
Rue3-1-31	1	2990956	2990957	1	T	core_nonrep	8	1	1
Rue3-1-31	1	2991627	2991628	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	2992866	2992867	1	A	core_nonrep	6	1	1
Rue3-1-31	1	3006718	3006719	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3008065	3008066	1	G	core_nonrep	18	1	1
Rue3-1-31	1	3034268	3034269	1	T	core_nonrep	12	0.857143	1
Rue3-1-31	1	3042470	3042471	1	T	core_nonrep	13	1	1
Rue3-1-31	1	3046804	3046805	1	C	core_nonrep	5	1	1
Rue3-1-31	1	3051872	3051873	1	A	core_nonrep	6	1	1
Rue3-1-31	1	3059785	3059786	1	G	core_nonrep	7	0.875	1
Rue3-1-31	1	3072279	3072280	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	3079724	3079725	2	AC	core_nonrep	4	1	1
Rue3-1-31	1	3082395	3082396	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	3082519	3082520	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	3083055	3083056	2	AA	core_nonrep	9	0.833333	1
Rue3-1-31	1	3083290	3083291	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3088535	3088536	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	3093178	3093179	1	T	core_nonrep	7	0.8	1
Rue3-1-31	1	3100042	3100043	1	A	core_nonrep	8	0.714286	1
Rue3-1-31	1	3100386	3100387	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3100733	3100734	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	3100736	3100737	1	T	core_nonrep	3	1	1
Rue3-1-31	1	3101014	3101015	1	A	nonrep	4	1	1
Rue3-1-31	1	3102920	3102921	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3103027	3103028	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	1	3103161	3103162	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3103336	3103337	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3103553	3103554	1	A	core_nonrep	6	1	1
Rue3-1-31	1	3103857	3103858	3	TTT	core_nonrep	4	1	1
Rue3-1-31	1	3103909	3103910	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3104102	3104103	1	A	core_nonrep	8	1	1
Rue3-1-31	1	3122334	3122335	1	T	core_nonrep	10	1	1
Rue3-1-31	1	3125256	3125257	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	3130214	3130215	1	T	core_nonrep	8	1	1
Rue3-1-31	1	3131903	3131904	1	G	core_nonrep	5	1	1
Rue3-1-31	1	3132217	3132218	1	A	nonrep	3	0.75	1
Rue3-1-31	1	3133716	3133717	1	G	core_nonrep	12	0.833333	1
Rue3-1-31	1	3140493	3140494	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	3140495	3140496	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3170218	3170219	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	3170285	3170286	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3170456	3170457	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	3171979	3171980	1	A	core_nonrep	7	1	1
Rue3-1-31	1	3173964	3173965	1	T	core_nonrep	7	0.7	1
Rue3-1-31	1	3184427	3184428	1	C	core_nonrep	5	1	1
Rue3-1-31	1	3201081	3201082	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3201440	3201441	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	3215681	3215682	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	3215682	3215683	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3250352	3250353	2	CC	core_nonrep	4	1	1
Rue3-1-31	1	3251649	3251650	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3251800	3251801	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3251802	3251803	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3256309	3256310	1	T	core_nonrep	3	1	1
Rue3-1-31	1	3261177	3261178	1	A	core_nonrep	7	1	1
Rue3-1-31	1	3269765	3269766	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	3271037	3271038	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3272492	3272493	1	C	nonrep	3	0.75	1
Rue3-1-31	1	3273051	3273052	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3274114	3274115	1	T	core_nonrep	7	1	1
Rue3-1-31	1	3278170	3278171	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3278969	3278970	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	3284105	3284106	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	3284240	3284241	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3284397	3284398	1	A	core_nonrep	7	1	1
Rue3-1-31	1	3296595	3296596	1	T	core_nonrep	3	1	1
Rue3-1-31	1	3304095	3304096	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	3304646	3304647	1	A	core_nonrep	10	1	1
Rue3-1-31	1	3307926	3307927	1	G	core_nonrep	5	1	1
Rue3-1-31	1	3308214	3308215	1	A	core_nonrep	3	1	1
Rue3-1-31	1	3324787	3324788	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3338323	3338324	2	AG	core_nonrep	5	1	1
Rue3-1-31	1	3338324	3338325	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3346110	3346111	1	G	core_nonrep	8	1	1
Rue3-1-31	1	3356368	3356369	3	TTC	core_nonrep	5	1	1
Rue3-1-31	1	3359467	3359468	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3362322	3362323	1	C	core_nonrep	15	1	1
Rue3-1-31	1	3366452	3366453	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3368118	3368119	1	C	core_nonrep	9	0.9	1
Rue3-1-31	1	3370460	3370461	1	T	core_nonrep	3	1	1
Rue3-1-31	1	3377486	3377487	1	C	core_nonrep	9	1	1
Rue3-1-31	1	3378166	3378167	1	T	core_nonrep	19	0.882353	1
Rue3-1-31	1	3383110	3383111	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3383557	3383558	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	3384125	3384126	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	1	3397095	3397096	1	C	core_nonrep	3	1	1
Rue3-1-31	1	3397481	3397482	1	G	core_nonrep	26	0.904762	1
Rue3-1-31	1	3397910	3397911	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3413374	3413375	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3419615	3419616	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3419657	3419658	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	3419659	3419660	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	3420290	3420291	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	1	3422532	3422533	2	TT	nonrep	3	0.75	1
Rue3-1-31	1	3423698	3423699	2	GA	core_nonrep	5	1	1
Rue3-1-31	1	3441927	3441928	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3446250	3446251	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	3446800	3446801	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3453378	3453379	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	3458398	3458399	2	AC	core_nonrep	7	1	1
Rue3-1-31	1	3458592	3458593	1	T	core_nonrep	10	1	1
Rue3-1-31	1	3463717	3463718	1	T	core_nonrep	8	0.7	1
Rue3-1-31	1	3470883	3470884	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	3471393	3471394	1	A	core_nonrep	13	1	1
Rue3-1-31	1	3477832	3477833	1	T	core_nonrep	7	1	1
Rue3-1-31	1	3483941	3483942	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3498782	3498783	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	3499999	3500000	1	A	core_nonrep	8	1	1
Rue3-1-31	1	3522322	3522323	1	A	nonrep	3	0.75	1
Rue3-1-31	1	3523828	3523829	1	G	core_nonrep	5	1	1
Rue3-1-31	1	3544344	3544345	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3546395	3546396	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3553125	3553126	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	3562605	3562606	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3567648	3567649	1	A	core_nonrep	13	1	1
Rue3-1-31	1	3573353	3573354	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	3579260	3579261	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3582956	3582957	1	C	core_nonrep	7	1	1
Rue3-1-31	1	3586093	3586094	1	A	core_nonrep	8	1	1
Rue3-1-31	1	3590342	3590343	1	C	core_nonrep	8	1	1
Rue3-1-31	1	3604381	3604382	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	3612992	3612993	1	G	core_nonrep	13	1	1
Rue3-1-31	1	3614876	3614877	1	G	core_nonrep	11	1	1
Rue3-1-31	1	3616302	3616303	1	C	core_nonrep	9	1	1
Rue3-1-31	1	3617174	3617175	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3619733	3619734	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	3621841	3621842	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	3637610	3637611	1	A	core_nonrep	7	0.8	1
Rue3-1-31	1	3644610	3644611	1	A	core_nonrep	10	1	1
Rue3-1-31	1	3650983	3650984	1	T	core_nonrep	12	0.833333	1
Rue3-1-31	1	3655612	3655613	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3670915	3670916	1	C	core_nonrep	11	1	1
Rue3-1-31	1	3688690	3688691	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3689248	3689249	1	C	core_nonrep	11	0.9	1
Rue3-1-31	1	3696738	3696739	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3702637	3702638	1	G	core_nonrep	8	0.7	1
Rue3-1-31	1	3709723	3709724	1	A	core_nonrep	6	1	1
Rue3-1-31	1	3731837	3731838	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	3740055	3740056	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3745681	3745682	1	A	core_nonrep	5	1	1.5
Rue3-1-31	1	3749976	3749977	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	3749977	3749978	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	3759618	3759619	2	AT	core_nonrep	4	0.8	1
Rue3-1-31	1	3761839	3761840	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	3763059	3763060	1	G	core_nonrep	5	1	1
Rue3-1-31	1	3763091	3763092	1	A	core_nonrep	5	1	1
Rue3-1-31	1	3763201	3763202	1	C	core_nonrep	11	0.916667	1
Rue3-1-31	1	3763202	3763203	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	1	3765112	3765113	1	A	core_nonrep	11	1	1
Rue3-1-31	1	3765858	3765859	2	TC	core_nonrep	8	0.875	1
Rue3-1-31	1	3765860	3765861	1	A	core_nonrep	11	1	1
Rue3-1-31	1	3766008	3766009	2	AC	core_nonrep	9	1	1
Rue3-1-31	1	3766636	3766637	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	3767216	3767217	1	A	core_nonrep	20	1	1
Rue3-1-31	1	3769992	3769993	1	G	core_nonrep	6	1	1
Rue3-1-31	1	3772564	3772565	1	A	core_nonrep	7	1	1
Rue3-1-31	1	3773232	3773233	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3773422	3773423	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	1	3773607	3773608	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3775348	3775349	1	C	core_nonrep	4	1	1
Rue3-1-31	1	3776768	3776769	2	GC	core_nonrep	6	1	1
Rue3-1-31	1	3778531	3778532	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3779637	3779638	1	T	core_nonrep	7	1	1
Rue3-1-31	1	3788982	3788983	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3801335	3801336	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	3825325	3825326	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3827812	3827813	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	3829324	3829325	1	A	core_nonrep	17	1	1
Rue3-1-31	1	3829325	3829326	1	T	core_nonrep	17	0.882353	1
Rue3-1-31	1	3830778	3830779	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	3831214	3831215	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3833518	3833519	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	1	3855462	3855463	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3856122	3856123	1	A	core_nonrep	8	1	1
Rue3-1-31	1	3860258	3860259	1	G	core_nonrep	19	0.944444	1
Rue3-1-31	1	3862207	3862208	1	A	core_nonrep	9	1	1
Rue3-1-31	1	3863075	3863076	1	G	core_nonrep	6	1	1
Rue3-1-31	1	3863277	3863278	1	C	core_nonrep	8	1	1
Rue3-1-31	1	3863390	3863391	1	T	core_nonrep	6	1	1
Rue3-1-31	1	3878293	3878294	2	AT	core_nonrep	13	0.916667	1
Rue3-1-31	1	3885293	3885294	1	T	core_nonrep	7	1	1
Rue3-1-31	1	3885474	3885475	1	A	core_nonrep	3	1	1
Rue3-1-31	1	3892272	3892273	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	3909937	3909938	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	3920516	3920517	1	T	core_nonrep	8	1	1
Rue3-1-31	1	3920518	3920519	1	A	core_nonrep	7	1	1
Rue3-1-31	1	3925387	3925388	1	G	nonrep	3	1	1
Rue3-1-31	1	3926022	3926023	1	A	nonrep	3	1	1
Rue3-1-31	1	3926264	3926265	1	T	core_nonrep	4	1	1
Rue3-1-31	1	3927397	3927398	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3929806	3929807	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	3931481	3931482	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	3936550	3936551	1	A	nonrep	3	1	1
Rue3-1-31	1	3937070	3937071	1	A	core_nonrep	8	1	1
Rue3-1-31	1	3938917	3938918	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	3961849	3961850	1	T	core_nonrep	7	1	1
Rue3-1-31	1	3971815	3971816	1	T	core_nonrep	12	1	1
Rue3-1-31	1	3972288	3972289	1	C	core_nonrep	12	1	1
Rue3-1-31	1	3973827	3973828	1	T	nonrep	4	1	1
Rue3-1-31	1	3974328	3974329	1	G	core_nonrep	7	1	1
Rue3-1-31	1	3979341	3979342	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	3985511	3985512	1	T	core_nonrep	19	0.933333	1
Rue3-1-31	1	3989496	3989497	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	3989498	3989499	1	C	core_nonrep	7	1	1
Rue3-1-31	1	3991477	3991478	1	A	core_nonrep	4	1	1
Rue3-1-31	1	3993241	3993242	1	G	core_nonrep	8	1	1
Rue3-1-31	1	3993797	3993798	1	A	core_nonrep	3	1	1
Rue3-1-31	1	3994424	3994425	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	3997997	3997998	1	A	core_nonrep	3	1	1
Rue3-1-31	1	3998471	3998472	1	T	core_nonrep	5	1	1
Rue3-1-31	1	3999132	3999133	2	AT	core_nonrep	6	1	1
Rue3-1-31	1	3999713	3999714	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	4003414	4003415	1	G	core_nonrep	8	1	1
Rue3-1-31	1	4003723	4003724	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4003844	4003845	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4007628	4007629	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	4010489	4010490	1	C	core_nonrep	13	0.9	1
Rue3-1-31	1	4016006	4016007	1	C	core_nonrep	13	0.833333	1
Rue3-1-31	1	4017396	4017397	1	C	core_nonrep	16	1	1
Rue3-1-31	1	4019043	4019044	1	A	core_nonrep	17	0.875	1
Rue3-1-31	1	4019939	4019940	2	AA	core_nonrep	7	1	1
Rue3-1-31	1	4042737	4042738	1	A	core_nonrep	8	0.7	1
Rue3-1-31	1	4049340	4049341	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4050102	4050103	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	4052252	4052253	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	4055877	4055878	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	4057784	4057785	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4062003	4062004	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4063834	4063835	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	4070021	4070022	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	4081921	4081922	1	C	core_nonrep	8	1	1
Rue3-1-31	1	4082579	4082580	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	4085892	4085893	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4095436	4095437	1	T	core_nonrep	12	1	1
Rue3-1-31	1	4096716	4096717	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	4118256	4118257	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	4131792	4131793	2	TC	core_nonrep	4	1	1
Rue3-1-31	1	4131852	4131853	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4132303	4132304	2	AA	core_nonrep	8	0.777778	1
Rue3-1-31	1	4132307	4132308	1	G	core_nonrep	8	1	1
Rue3-1-31	1	4134736	4134737	1	A	nonrep	3	1	1
Rue3-1-31	1	4135325	4135326	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4135329	4135330	1	C	core_nonrep	5	1	1
Rue3-1-31	1	4135780	4135781	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	4152392	4152393	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4152708	4152709	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4153106	4153107	1	T	nonrep	4	1	1
Rue3-1-31	1	4157884	4157885	1	T	core_nonrep	11	1	1
Rue3-1-31	1	4157885	4157886	2	GA	core_nonrep	7	1	1
Rue3-1-31	1	4160838	4160839	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	4160839	4160840	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	4171062	4171063	1	T	nonrep	4	0.8	1
Rue3-1-31	1	4178337	4178338	1	A	core_nonrep	11	0.75	1
Rue3-1-31	1	4186692	4186693	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	4188744	4188745	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4193856	4193857	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4207202	4207203	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	4211799	4211800	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4218052	4218053	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	4222631	4222632	1	C	core_nonrep	7	1	1
Rue3-1-31	1	4222663	4222664	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4222814	4222815	1	G	core_nonrep	8	1	1
Rue3-1-31	1	4222954	4222955	1	T	core_nonrep	9	1	1
Rue3-1-31	1	4223058	4223059	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	4223155	4223156	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4223597	4223598	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	4224727	4224728	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4232813	4232814	1	G	nonrep	3	0.75	1
Rue3-1-31	1	4232969	4232970	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	4234544	4234545	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	1	4240008	4240009	1	C	core_nonrep	7	1	1
Rue3-1-31	1	4241521	4241522	2	AT	core_nonrep	8	0.75	1
Rue3-1-31	1	4242857	4242858	1	T	core_nonrep	15	1	1
Rue3-1-31	1	4243324	4243325	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	1	4243875	4243876	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4245215	4245216	1	T	core_nonrep	11	1	1
Rue3-1-31	1	4253232	4253233	1	G	nonrep	3	0.75	1
Rue3-1-31	1	4263266	4263267	1	T	nonrep	3	0.75	1
Rue3-1-31	1	4274273	4274274	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4285803	4285804	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4289373	4289374	1	A	core_nonrep	10	1	1
Rue3-1-31	1	4290202	4290203	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4290934	4290935	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4292135	4292136	1	C	core_nonrep	12	1	1
Rue3-1-31	1	4292546	4292547	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	4297061	4297062	1	A	core_nonrep	18	1	1
Rue3-1-31	1	4301941	4301942	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	1	4302207	4302208	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	4302211	4302212	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	1	4303564	4303565	1	G	core_nonrep	3	1	1
Rue3-1-31	1	4305678	4305679	1	G	core_nonrep	12	0.8	1
Rue3-1-31	1	4305912	4305913	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	1	4307993	4307994	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4308092	4308093	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	4308692	4308693	1	G	core_nonrep	3	1	1
Rue3-1-31	1	4309246	4309247	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4309267	4309268	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	4310892	4310893	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4312693	4312694	2	TA	core_nonrep	6	0.75	1
Rue3-1-31	1	4312872	4312873	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	4316091	4316092	1	C	core_nonrep	4	1	1
Rue3-1-31	1	4316184	4316185	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4316501	4316502	1	G	core_nonrep	5	1	1
Rue3-1-31	1	4316503	4316504	1	G	core_nonrep	5	1	1
Rue3-1-31	1	4317991	4317992	1	T	core_nonrep	3	1	1
Rue3-1-31	1	4318508	4318509	1	C	core_nonrep	15	0.916667	1
Rue3-1-31	1	4323056	4323057	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	4323350	4323351	2	CA	core_nonrep	9	0.727273	1
Rue3-1-31	1	4326283	4326284	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	1	4327728	4327729	1	A	core_nonrep	8	0.8	1
Rue3-1-31	1	4332089	4332090	1	C	core_nonrep	16	1	1
Rue3-1-31	1	4339050	4339051	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4343077	4343078	1	A	core_nonrep	10	1	1
Rue3-1-31	1	4347682	4347683	1	A	core_nonrep	9	1	1
Rue3-1-31	1	4348496	4348497	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4349487	4349488	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	4351190	4351191	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4358222	4358223	1	G	core_nonrep	13	0.916667	1
Rue3-1-31	1	4358224	4358225	1	A	core_nonrep	13	0.857143	1
Rue3-1-31	1	4367420	4367421	1	C	core_nonrep	9	1	1
Rue3-1-31	1	4367421	4367422	1	T	core_nonrep	10	1	1
Rue3-1-31	1	4374136	4374137	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	4377198	4377199	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4379628	4379629	1	C	core_nonrep	11	1	1
Rue3-1-31	1	4379630	4379631	1	A	core_nonrep	10	1	1
Rue3-1-31	1	4391155	4391156	2	TT	core_nonrep	9	1	1
Rue3-1-31	1	4402068	4402069	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	4402341	4402342	1	A	core_nonrep	9	1	1
Rue3-1-31	1	4403631	4403632	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	4412135	4412136	3	TAC	core_nonrep	4	1	1
Rue3-1-31	1	4412778	4412779	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4421944	4421945	1	T	core_nonrep	9	1	1
Rue3-1-31	1	4428869	4428870	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4431045	4431046	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4432197	4432198	1	A	core_nonrep	14	1	1
Rue3-1-31	1	4440289	4440290	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	4453491	4453492	1	T	core_nonrep	6	1	1
Rue3-1-31	1	4458381	4458382	1	T	nonrep	3	1	1
Rue3-1-31	1	4463397	4463398	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4463398	4463399	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4471160	4471161	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4479485	4479486	1	C	core_nonrep	23	1	1
Rue3-1-31	1	4493448	4493449	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	4494472	4494473	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	1	4497331	4497332	1	G	core_nonrep	7	1	1
Rue3-1-31	1	4507143	4507144	1	A	nonrep	3	0.75	1
Rue3-1-31	1	4507284	4507285	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	4508325	4508326	2	GA	core_nonrep	13	0.705882	1
Rue3-1-31	1	4524321	4524322	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	4536538	4536539	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4546998	4546999	1	C	core_nonrep	13	1	1
Rue3-1-31	1	4547480	4547481	1	C	core_nonrep	9	1	1
Rue3-1-31	1	4547487	4547488	1	C	core_nonrep	12	0.888889	1
Rue3-1-31	1	4550256	4550257	1	T	core_nonrep	3	1	1
Rue3-1-31	1	4580428	4580429	1	A	nonrep	3	1	1
Rue3-1-31	1	4581208	4581209	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4586629	4586630	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	4591143	4591144	1	C	core_nonrep	5	0.75	1
Rue3-1-31	1	4591695	4591696	1	T	nonrep	3	1	1
Rue3-1-31	1	4593309	4593310	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4595561	4595562	1	T	nonrep	3	1	1
Rue3-1-31	1	4610508	4610509	2	AA	nonrep	6	0.857143	1
Rue3-1-31	1	4610539	4610540	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	1	4610881	4610882	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4611336	4611337	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4615194	4615195	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4617725	4617726	1	C	core_nonrep	4	1	1
Rue3-1-31	1	4625639	4625640	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4625640	4625641	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	4644407	4644408	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4651569	4651570	1	T	nonrep	3	0.75	1
Rue3-1-31	1	4651680	4651681	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4657061	4657062	1	G	core_nonrep	3	1	1
Rue3-1-31	1	4664187	4664188	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	4665446	4665447	1	G	core_nonrep	3	1	1
Rue3-1-31	1	4673070	4673071	1	A	core_nonrep	8	0.714286	1
Rue3-1-31	1	4691224	4691225	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4692757	4692758	1	T	core_nonrep	3	1	1
Rue3-1-31	1	4695755	4695756	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4697122	4697123	1	A	nonrep	3	0.75	1
Rue3-1-31	1	4699922	4699923	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	4701491	4701492	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4709354	4709355	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4713391	4713392	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	4717904	4717905	1	T	core_nonrep	10	1	1
Rue3-1-31	1	4734268	4734269	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4762179	4762180	1	C	core_nonrep	10	1	1
Rue3-1-31	1	4773758	4773759	1	A	core_nonrep	14	0.866667	1
Rue3-1-31	1	4774180	4774181	1	C	core_nonrep	18	1	1
Rue3-1-31	1	4775748	4775749	1	A	core_nonrep	11	1	1
Rue3-1-31	1	4777619	4777620	1	T	core_nonrep	6	1	1
Rue3-1-31	1	4784711	4784712	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	4795199	4795200	1	A	core_nonrep	10	1	1
Rue3-1-31	1	4798988	4798989	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4810469	4810470	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4811541	4811542	1	T	core_nonrep	3	1	1
Rue3-1-31	1	4815145	4815146	1	G	nonrep	18	0.947368	1
Rue3-1-31	1	4818374	4818375	1	T	core_nonrep	6	1	1
Rue3-1-31	1	4822477	4822478	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4824303	4824304	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4824854	4824855	1	A	core_nonrep	13	1	1
Rue3-1-31	1	4825492	4825493	1	A	core_nonrep	8	1	1
Rue3-1-31	1	4826316	4826317	1	T	core_nonrep	7	1	1
Rue3-1-31	1	4830082	4830083	2	TG	core_nonrep	5	0.833333	1
Rue3-1-31	1	4830213	4830214	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4830214	4830215	2	CC	core_nonrep	5	1	1
Rue3-1-31	1	4830419	4830420	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	4847915	4847916	1	G	core_nonrep	21	1	1
Rue3-1-31	1	4848548	4848549	1	T	core_nonrep	22	0.894737	1
Rue3-1-31	1	4849576	4849577	1	T	core_nonrep	12	0.8	1
Rue3-1-31	1	4864236	4864237	2	GA	core_nonrep	6	1	1
Rue3-1-31	1	4870085	4870086	1	G	core_nonrep	4	1	1
Rue3-1-31	1	4871704	4871705	1	G	core_nonrep	5	1	1
Rue3-1-31	1	4875850	4875851	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	4881800	4881801	1	C	core_nonrep	5	0.75	1
Rue3-1-31	1	4881804	4881805	1	G	core_nonrep	5	1	1
Rue3-1-31	1	4882052	4882053	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	4884902	4884903	1	T	core_nonrep	4	1	1
Rue3-1-31	1	4893492	4893493	2	AG	core_nonrep	5	1	1
Rue3-1-31	1	4893519	4893520	1	A	core_nonrep	7	1	1
Rue3-1-31	1	4896477	4896478	1	T	core_nonrep	8	1	1
Rue3-1-31	1	4901618	4901619	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	4907221	4907222	1	T	nonrep	3	0.75	1
Rue3-1-31	1	4907460	4907461	2	CA	core_nonrep	10	1	1
Rue3-1-31	1	4908101	4908102	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	4921109	4921110	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4922182	4922183	1	A	nonrep	3	0.75	1
Rue3-1-31	1	4938027	4938028	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4941829	4941830	1	C	core_nonrep	6	1	1
Rue3-1-31	1	4942520	4942521	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4945595	4945596	1	A	core_nonrep	5	1	1
Rue3-1-31	1	4949803	4949804	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	4958440	4958441	1	A	core_nonrep	6	1	1
Rue3-1-31	1	4959906	4959907	1	G	core_nonrep	6	1	1
Rue3-1-31	1	4965423	4965424	1	T	core_nonrep	5	1	1
Rue3-1-31	1	4970142	4970143	1	A	core_nonrep	3	1	1
Rue3-1-31	1	4975877	4975878	1	C	core_nonrep	6	1	1
Rue3-1-31	1	4977571	4977572	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	4978186	4978187	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	4978196	4978197	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4983409	4983410	1	C	core_nonrep	7	1	1
Rue3-1-31	1	4990992	4990993	1	A	core_nonrep	4	1	1
Rue3-1-31	1	4992625	4992626	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5005297	5005298	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	5006078	5006079	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	5008276	5008277	1	C	core_nonrep	7	1	1
Rue3-1-31	1	5008352	5008353	2	AG	core_nonrep	5	1	1
Rue3-1-31	1	5016662	5016663	1	T	core_nonrep	11	1	1
Rue3-1-31	1	5025947	5025948	1	T	core_nonrep	9	1	1
Rue3-1-31	1	5031067	5031068	1	T	core_nonrep	3	1	1
Rue3-1-31	1	5031069	5031070	1	G	core_nonrep	4	1	1
Rue3-1-31	1	5036893	5036894	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5037239	5037240	2	AA	nonrep	3	1	1
Rue3-1-31	1	5048921	5048922	1	T	core_nonrep	3	1	1
Rue3-1-31	1	5079749	5079750	1	A	core_nonrep	8	1	1
Rue3-1-31	1	5086708	5086709	1	A	core_nonrep	7	1	1
Rue3-1-31	1	5130220	5130221	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	5130781	5130782	1	T	core_nonrep	7	1	1
Rue3-1-31	1	5131279	5131280	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5131707	5131708	1	C	core_nonrep	3	1	1
Rue3-1-31	1	5132939	5132940	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	5134146	5134147	1	T	core_nonrep	5	1	1
Rue3-1-31	1	5136434	5136435	1	A	core_nonrep	4	1	1
Rue3-1-31	1	5137751	5137752	2	TG	core_nonrep	7	1	1
Rue3-1-31	1	5141574	5141575	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	5142251	5142252	1	G	core_nonrep	11	1	1
Rue3-1-31	1	5142459	5142460	1	A	core_nonrep	7	1	1
Rue3-1-31	1	5143369	5143370	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	5143748	5143749	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5143888	5143889	1	T	core_nonrep	6	1	1
Rue3-1-31	1	5144145	5144146	1	C	core_nonrep	4	1	1
Rue3-1-31	1	5145492	5145493	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	5145531	5145532	1	A	core_nonrep	4	1	1
Rue3-1-31	1	5147267	5147268	1	G	core_nonrep	8	1	1
Rue3-1-31	1	5148470	5148471	1	A	core_nonrep	8	0.727273	1
Rue3-1-31	1	5148471	5148472	2	GG	core_nonrep	8	0.8	1
Rue3-1-31	1	5148648	5148649	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	1	5151057	5151058	1	G	core_nonrep	13	1	1
Rue3-1-31	1	5151226	5151227	1	A	core_nonrep	4	1	1
Rue3-1-31	1	5151436	5151437	1	T	core_nonrep	3	1	1
Rue3-1-31	1	5154143	5154144	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	5154179	5154180	1	A	core_nonrep	4	1	1
Rue3-1-31	1	5154609	5154610	1	G	core_nonrep	7	0.875	1
Rue3-1-31	1	5155298	5155299	1	G	core_nonrep	10	1	1
Rue3-1-31	1	5156050	5156051	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5157286	5157287	1	C	core_nonrep	5	1	1
Rue3-1-31	1	5158986	5158987	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5160824	5160825	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	5167784	5167785	1	G	core_nonrep	15	0.857143	1
Rue3-1-31	1	5170085	5170086	1	T	core_nonrep	6	1	1
Rue3-1-31	1	5170290	5170291	1	A	core_nonrep	8	1	1
Rue3-1-31	1	5172675	5172676	1	T	nonrep	3	1	1
Rue3-1-31	1	5176426	5176427	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	5176695	5176696	1	T	core_nonrep	7	1	1
Rue3-1-31	1	5176951	5176952	1	T	core_nonrep	9	1	1
Rue3-1-31	1	5177413	5177414	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	5194515	5194516	1	T	nonrep	3	1	1
Rue3-1-31	1	5196100	5196101	1	A	core_nonrep	8	1	1
Rue3-1-31	1	5202932	5202933	1	T	core_nonrep	11	1	1
Rue3-1-31	1	5223675	5223676	1	T	core_nonrep	14	1	1
Rue3-1-31	1	5231154	5231155	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5352548	5352549	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	5374858	5374859	2	AC	core_nonrep	3	1	1
Rue3-1-31	1	5388724	5388725	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	5390068	5390069	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	5393206	5393207	3	ATT	core_nonrep	6	1	1
Rue3-1-31	1	5393994	5393995	1	A	core_nonrep	18	0.923077	1
Rue3-1-31	1	5394175	5394176	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	5394999	5395000	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5395380	5395381	1	T	core_nonrep	7	1	1
Rue3-1-31	1	5402604	5402605	2	AC	core_nonrep	9	1	1
Rue3-1-31	1	5405670	5405671	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	5405671	5405672	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	5407358	5407359	1	T	core_nonrep	18	0.875	1
Rue3-1-31	1	5410091	5410092	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	5423747	5423748	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	1	5424617	5424618	2	CA	core_nonrep	3	0.75	1
Rue3-1-31	1	5426942	5426943	1	A	core_nonrep	26	0.88	1
Rue3-1-31	1	5426943	5426944	1	C	core_nonrep	27	1	1
Rue3-1-31	1	5428472	5428473	1	T	core_nonrep	8	1	1
Rue3-1-31	1	5429877	5429878	1	G	core_nonrep	8	1	1
Rue3-1-31	1	5456137	5456138	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	1	5465148	5465149	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	1	5465820	5465821	1	T	core_nonrep	5	1	1
Rue3-1-31	1	5469603	5469604	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5470828	5470829	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	5470878	5470879	1	A	nonrep	3	1	1
Rue3-1-31	1	5480709	5480710	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5480754	5480755	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	5485363	5485364	1	T	core_nonrep	7	1	1
Rue3-1-31	1	5485677	5485678	1	T	core_nonrep	13	1	1
Rue3-1-31	1	5498564	5498565	1	T	core_nonrep	17	0.866667	1
Rue3-1-31	1	5504327	5504328	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	5515141	5515142	1	T	core_nonrep	10	0.75	1
Rue3-1-31	1	5515144	5515145	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	5515146	5515147	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	1	5517012	5517013	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	1	5539367	5539368	3	TCT	core_nonrep	7	0.777778	1
Rue3-1-31	1	5543054	5543055	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	5548379	5548380	3	GGC	core_nonrep	8	1	1
Rue3-1-31	1	5552497	5552498	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	5562235	5562236	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	5573316	5573317	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5593583	5593584	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	5593584	5593585	1	G	core_nonrep	3	1	1
Rue3-1-31	1	5595631	5595632	2	AA	core_nonrep	7	0.75	1
Rue3-1-31	1	5601021	5601022	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	5601846	5601847	1	A	nonrep	3	0.75	1
Rue3-1-31	1	5601973	5601974	1	A	nonrep	3	0.75	1
Rue3-1-31	1	5607837	5607838	2	AA	nonrep	4	1	1
Rue3-1-31	1	5610281	5610282	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	5611609	5611610	1	A	core_nonrep	6	1	1
Rue3-1-31	1	5614026	5614027	1	T	nonrep	3	0.75	1
Rue3-1-31	1	5619743	5619744	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	1	5628143	5628144	1	G	core_nonrep	17	0.8	1
Rue3-1-31	1	5640579	5640580	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	5641885	5641886	1	T	core_nonrep	6	1	1
Rue3-1-31	1	5641946	5641947	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5642145	5642146	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	1	5642400	5642401	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5642420	5642421	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	5644652	5644653	1	C	core_nonrep	3	1	1
Rue3-1-31	1	5654091	5654092	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5654502	5654503	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	5654509	5654510	1	C	core_nonrep	5	1	1
Rue3-1-31	1	5655021	5655022	1	A	core_nonrep	6	1	1
Rue3-1-31	1	5659664	5659665	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5663926	5663927	1	T	core_nonrep	9	1	1
Rue3-1-31	1	5668775	5668776	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5669424	5669425	1	T	core_nonrep	5	1	1
Rue3-1-31	1	5672039	5672040	1	A	nonrep	4	0.8	1
Rue3-1-31	1	5674958	5674959	1	A	core_nonrep	6	1	1
Rue3-1-31	1	5675854	5675855	2	TG	core_nonrep	7	1	1
Rue3-1-31	1	5677651	5677652	1	C	core_nonrep	9	0.8	1
Rue3-1-31	1	5684997	5684998	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5691567	5691568	1	G	nonrep	4	1	1
Rue3-1-31	1	5694594	5694595	1	T	nonrep	5	1	1
Rue3-1-31	1	5697491	5697492	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	5745109	5745110	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	5747061	5747062	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5778344	5778345	1	G	core_nonrep	12	0.9	1
Rue3-1-31	1	5778614	5778615	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	5796010	5796011	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	5797122	5797123	1	T	core_nonrep	7	1	1
Rue3-1-31	1	5798752	5798753	1	C	core_nonrep	10	1	1
Rue3-1-31	1	5807741	5807742	1	A	core_nonrep	3	1	1
Rue3-1-31	1	5828686	5828687	1	G	core_nonrep	3	1	1
Rue3-1-31	1	5833046	5833047	1	A	core_nonrep	15	1	1
Rue3-1-31	1	5833598	5833599	1	G	core_nonrep	8	0.8	1
Rue3-1-31	1	5855398	5855399	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	1	5861127	5861128	1	A	core_nonrep	6	1	1
Rue3-1-31	1	5862242	5862243	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	5864211	5864212	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5864225	5864226	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5864495	5864496	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5865654	5865655	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5869729	5869730	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	5874819	5874820	1	A	core_nonrep	7	1	1
Rue3-1-31	1	5874820	5874821	1	G	core_nonrep	7	1	1
Rue3-1-31	1	5878094	5878095	2	CC	core_nonrep	3	1	1
Rue3-1-31	1	5898786	5898787	1	A	core_nonrep	16	1	1
Rue3-1-31	1	5900120	5900121	1	C	core_nonrep	11	1	1
Rue3-1-31	1	5900122	5900123	1	G	core_nonrep	12	1	1
Rue3-1-31	1	5906988	5906989	1	A	core_nonrep	18	1	1
Rue3-1-31	1	5928716	5928717	1	T	core_nonrep	11	0.846154	1
Rue3-1-31	1	5928718	5928719	1	A	core_nonrep	12	1	1
Rue3-1-31	1	5931805	5931806	1	A	core_nonrep	4	1	1
Rue3-1-31	1	5933538	5933539	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5948319	5948320	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	1	5958567	5958568	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	5963475	5963476	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	5964385	5964386	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	5971113	5971114	2	TC	core_nonrep	3	1	1
Rue3-1-31	1	5973388	5973389	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	5976087	5976088	1	T	core_nonrep	4	1	1
Rue3-1-31	1	5976089	5976090	1	A	core_nonrep	5	1	1
Rue3-1-31	1	5976090	5976091	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6027354	6027355	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	6027645	6027646	1	G	core_nonrep	8	1	1
Rue3-1-31	1	6027646	6027647	1	T	core_nonrep	9	1	1
Rue3-1-31	1	6028301	6028302	1	C	core_nonrep	12	0.916667	1
Rue3-1-31	1	6038838	6038839	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6052347	6052348	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	6061737	6061738	1	G	core_nonrep	3	1	1
Rue3-1-31	1	6086811	6086812	1	T	core_nonrep	9	1	1
Rue3-1-31	1	6100600	6100601	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6140067	6140068	1	A	core_nonrep	8	1	1
Rue3-1-31	1	6141253	6141254	1	A	core_nonrep	7	1	1
Rue3-1-31	1	6148006	6148007	1	T	core_nonrep	17	0.9375	1
Rue3-1-31	1	6161937	6161938	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6162105	6162106	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	1	6162173	6162174	1	A	core_nonrep	13	0.923077	1
Rue3-1-31	1	6163350	6163351	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6163351	6163352	1	G	core_nonrep	3	1	1
Rue3-1-31	1	6163353	6163354	1	G	core_nonrep	3	1	1
Rue3-1-31	1	6176696	6176697	1	T	core_nonrep	6	1	1
Rue3-1-31	1	6181505	6181506	1	G	core_nonrep	7	1	1
Rue3-1-31	1	6232279	6232280	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6241463	6241464	1	T	core_nonrep	4	1	1
Rue3-1-31	1	6283444	6283445	1	A	core_nonrep	4	1	1
Rue3-1-31	1	6298053	6298054	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6298348	6298349	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	6308741	6308742	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	6309777	6309778	1	A	core_nonrep	7	1	1
Rue3-1-31	1	6326809	6326810	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6329385	6329386	1	T	core_nonrep	15	1	1
Rue3-1-31	1	6332780	6332781	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6332975	6332976	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	6361211	6361212	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	6375955	6375956	2	CC	core_nonrep	7	1	1
Rue3-1-31	1	6380935	6380936	1	A	nonrep	3	0.75	1
Rue3-1-31	1	6384551	6384552	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6389269	6389270	1	T	core_nonrep	6	1	1
Rue3-1-31	1	6397360	6397361	1	A	core_nonrep	18	0.923077	1
Rue3-1-31	1	6445558	6445559	1	T	core_nonrep	4	1	1
Rue3-1-31	1	6450273	6450274	1	T	nonrep	3	1	1
Rue3-1-31	1	6453705	6453706	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	6453804	6453805	1	T	core_nonrep	6	1	1
Rue3-1-31	1	6458777	6458778	1	A	core_nonrep	17	1	1
Rue3-1-31	1	6458909	6458910	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	6459072	6459073	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6459654	6459655	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	6460404	6460405	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	6461646	6461647	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	1	6463440	6463441	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	6465590	6465591	1	A	core_nonrep	4	1	1
Rue3-1-31	1	6472941	6472942	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6475585	6475586	1	T	core_nonrep	16	0.928571	1
Rue3-1-31	1	6479233	6479234	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6479690	6479691	1	A	core_nonrep	19	0.894737	1
Rue3-1-31	1	6480730	6480731	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6488111	6488112	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	6488743	6488744	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	6488930	6488931	1	A	core_nonrep	4	1	1
Rue3-1-31	1	6494311	6494312	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	1	6500649	6500650	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	1	6501037	6501038	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6507234	6507235	1	T	core_nonrep	8	1	1
Rue3-1-31	1	6513704	6513705	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6527499	6527500	1	G	core_nonrep	4	1	1
Rue3-1-31	1	6575887	6575888	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	6575892	6575893	1	C	core_nonrep	3	1	1
Rue3-1-31	1	6591522	6591523	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	1	6626529	6626530	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	6626829	6626830	1	A	nonrep	4	1	1
Rue3-1-31	1	6632260	6632261	1	C	core_nonrep	10	1	1
Rue3-1-31	1	6632261	6632262	1	T	core_nonrep	10	1	1
Rue3-1-31	1	6642406	6642407	1	A	core_nonrep	3	1	1
Rue3-1-31	1	6643596	6643597	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	1	6652570	6652571	1	G	core_nonrep	14	1	1
Rue3-1-31	1	6655761	6655762	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	6660489	6660490	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6661980	6661981	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6662791	6662792	1	A	core_nonrep	4	1	1
Rue3-1-31	1	6673308	6673309	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6677665	6677666	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6692332	6692333	1	A	core_nonrep	11	1	1
Rue3-1-31	1	6692365	6692366	1	G	core_nonrep	11	0.909091	1
Rue3-1-31	1	6697352	6697353	1	A	core_nonrep	9	1	1
Rue3-1-31	1	6699410	6699411	1	T	nonrep	3	1	1
Rue3-1-31	1	6716338	6716339	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6723923	6723924	2	TG	core_nonrep	16	1	1
Rue3-1-31	1	6747476	6747477	3	GGA	core_nonrep	7	0.875	1
Rue3-1-31	1	6756267	6756268	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	6761217	6761218	1	T	core_nonrep	9	0.875	1
Rue3-1-31	1	6764491	6764492	1	G	core_nonrep	3	1	1
Rue3-1-31	1	6770147	6770148	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6770148	6770149	1	C	core_nonrep	5	1	1
Rue3-1-31	1	6778331	6778332	1	T	core_nonrep	8	1	1
Rue3-1-31	1	6778578	6778579	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6785531	6785532	1	A	core_nonrep	3	1	1
Rue3-1-31	1	6785532	6785533	1	C	core_nonrep	3	1	1
Rue3-1-31	1	6792088	6792089	1	G	core_nonrep	7	1	1
Rue3-1-31	1	6793626	6793627	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	6811017	6811018	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	6811069	6811070	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6814168	6814169	1	A	core_nonrep	3	1	1
Rue3-1-31	1	6828243	6828244	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	6853280	6853281	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6855195	6855196	1	T	core_nonrep	3	1	1
Rue3-1-31	1	6870401	6870402	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	6874602	6874603	1	C	core_nonrep	8	1	1
Rue3-1-31	1	6876894	6876895	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6877901	6877902	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6882844	6882845	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	1	6885450	6885451	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6894523	6894524	2	CA	core_nonrep	3	1	1
Rue3-1-31	1	6894524	6894525	1	C	core_nonrep	3	1	1
Rue3-1-31	1	6894787	6894788	1	C	core_nonrep	5	1	1
Rue3-1-31	1	6895193	6895194	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	6896563	6896564	1	T	core_nonrep	8	1	1
Rue3-1-31	1	6896564	6896565	2	CC	core_nonrep	8	1	1
Rue3-1-31	1	6898822	6898823	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	6904466	6904467	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	6905826	6905827	2	GT	core_nonrep	3	1	1
Rue3-1-31	1	6905827	6905828	1	T	core_nonrep	4	1	1
Rue3-1-31	1	6911788	6911789	1	G	nonrep	3	0.75	1
Rue3-1-31	1	6924165	6924166	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6927111	6927112	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	6927114	6927115	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	6931621	6931622	1	A	core_nonrep	14	0.846154	1
Rue3-1-31	1	6932694	6932695	1	A	core_nonrep	19	1	1
Rue3-1-31	1	6935294	6935295	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	1	6947129	6947130	1	T	core_nonrep	5	1	1
Rue3-1-31	1	6947155	6947156	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	6950567	6950568	1	T	core_nonrep	7	1	1
Rue3-1-31	1	6951274	6951275	1	G	core_nonrep	11	1	1
Rue3-1-31	1	6961297	6961298	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6966128	6966129	1	T	core_nonrep	4	1	1
Rue3-1-31	1	6974737	6974738	1	G	core_nonrep	5	1	1
Rue3-1-31	1	6976890	6976891	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6977269	6977270	1	C	core_nonrep	5	1	1
Rue3-1-31	1	6980961	6980962	1	A	core_nonrep	7	1	1
Rue3-1-31	1	6983968	6983969	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	6984072	6984073	1	A	core_nonrep	5	1	1
Rue3-1-31	1	6998740	6998741	1	A	core_nonrep	6	1	1
Rue3-1-31	1	6999987	6999988	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7001344	7001345	1	A	core_nonrep	7	0.8	1
Rue3-1-31	1	7004908	7004909	1	A	nonrep	4	1	1
Rue3-1-31	1	7005837	7005838	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	7007843	7007844	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	7007915	7007916	1	G	core_nonrep	10	0.833333	1
Rue3-1-31	1	7017233	7017234	1	C	nonrep	5	0.833333	1
Rue3-1-31	1	7019231	7019232	1	G	core_nonrep	14	1	1
Rue3-1-31	1	7021110	7021111	1	T	core_nonrep	7	1	1
Rue3-1-31	1	7041475	7041476	2	GA	core_nonrep	5	0.8	1
Rue3-1-31	1	7048051	7048052	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7049792	7049793	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	7050141	7050142	1	T	core_nonrep	17	1	1.52381
Rue3-1-31	1	7054444	7054445	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	7055530	7055531	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7055564	7055565	1	A	core_nonrep	6	1	1
Rue3-1-31	1	7060739	7060740	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	7078521	7078522	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	7082544	7082545	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7082546	7082547	1	T	core_nonrep	4	1	1
Rue3-1-31	1	7082588	7082589	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	7087016	7087017	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7098004	7098005	1	T	core_nonrep	4	1	1
Rue3-1-31	1	7101385	7101386	2	TA	core_nonrep	7	1	1
Rue3-1-31	1	7101418	7101419	3	CTT	core_nonrep	7	1	1
Rue3-1-31	1	7117016	7117017	3	GAG	core_nonrep	7	1	1
Rue3-1-31	1	7141144	7141145	1	T	core_nonrep	7	1	1
Rue3-1-31	1	7146456	7146457	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	7151765	7151766	1	T	core_nonrep	8	1	1
Rue3-1-31	1	7151914	7151915	1	A	nonrep	3	0.75	1
Rue3-1-31	1	7153499	7153500	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7161233	7161234	1	G	nonrep	3	0.75	1
Rue3-1-31	1	7161641	7161642	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	7163119	7163120	1	C	core_nonrep	12	0.9	1
Rue3-1-31	1	7164266	7164267	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	7164507	7164508	1	A	core_nonrep	6	1	1
Rue3-1-31	1	7165436	7165437	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	7166029	7166030	1	C	core_nonrep	3	1	1
Rue3-1-31	1	7166543	7166544	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7167438	7167439	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7174174	7174175	1	A	nonrep	3	1	1
Rue3-1-31	1	7175885	7175886	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7183323	7183324	2	TT	core_nonrep	15	0.923077	1
Rue3-1-31	1	7185255	7185256	2	GA	core_nonrep	5	0.8	1
Rue3-1-31	1	7196456	7196457	2	TG	core_nonrep	5	1	1
Rue3-1-31	1	7200360	7200361	1	A	nonrep	3	0.75	1.2
Rue3-1-31	1	7206988	7206989	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7214814	7214815	1	T	core_nonrep	8	1	1
Rue3-1-31	1	7220955	7220956	1	A	core_nonrep	7	0.8	1
Rue3-1-31	1	7224871	7224872	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	7230246	7230247	1	G	core_nonrep	5	0.714286	1
Rue3-1-31	1	7239766	7239767	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	7241617	7241618	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7249157	7249158	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	7251866	7251867	1	C	core_nonrep	4	1	1
Rue3-1-31	1	7280034	7280035	1	T	core_nonrep	15	1	1
Rue3-1-31	1	7290144	7290145	2	CG	core_nonrep	9	1	1
Rue3-1-31	1	7297355	7297356	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	1	7299492	7299493	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	7302206	7302207	2	AT	core_nonrep	8	0.875	1
Rue3-1-31	1	7317897	7317898	1	T	core_nonrep	9	1	1
Rue3-1-31	1	7322622	7322623	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	7335705	7335706	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7335889	7335890	3	TGT	core_nonrep	4	1	1
Rue3-1-31	1	7336022	7336023	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	7339478	7339479	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7343420	7343421	1	A	core_nonrep	3	1	1
Rue3-1-31	1	7348335	7348336	1	G	core_nonrep	8	1	1
Rue3-1-31	1	7352489	7352490	1	C	core_nonrep	4	1	1
Rue3-1-31	1	7368733	7368734	1	T	core_nonrep	5	1	1
Rue3-1-31	1	7381933	7381934	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	7382073	7382074	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	7382745	7382746	1	G	nonrep	5	0.714286	1
Rue3-1-31	1	7384135	7384136	1	T	core_nonrep	4	1	1
Rue3-1-31	1	7387315	7387316	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	1	7397329	7397330	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7402019	7402020	1	A	nonrep	6	0.857143	1
Rue3-1-31	1	7404310	7404311	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	7410450	7410451	1	A	core_nonrep	14	1	1
Rue3-1-31	1	7412850	7412851	1	A	core_nonrep	9	1	1
Rue3-1-31	1	7424389	7424390	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	7442692	7442693	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	1	7443258	7443259	1	C	core_nonrep	7	1	1.2
Rue3-1-31	1	7443559	7443560	1	T	core_nonrep	8	1	1
Rue3-1-31	1	7460613	7460614	1	A	core_nonrep	9	1	1
Rue3-1-31	1	7465587	7465588	3	GTT	core_nonrep	6	0.714286	1
Rue3-1-31	1	7468014	7468015	1	A	nonrep	4	0.8	1
Rue3-1-31	1	7477409	7477410	1	A	core_nonrep	13	1	1
Rue3-1-31	1	7491413	7491414	2	CC	core_nonrep	6	1	1
Rue3-1-31	1	7491971	7491972	1	A	nonrep	3	1	1
Rue3-1-31	1	7496582	7496583	1	T	core_nonrep	3	1	1
Rue3-1-31	1	7496730	7496731	2	AC	core_nonrep	7	0.875	1
Rue3-1-31	1	7503788	7503789	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	7517436	7517437	1	T	core_nonrep	8	0.727273	1
Rue3-1-31	1	7518041	7518042	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	1	7518042	7518043	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7518607	7518608	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	1	7521872	7521873	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7522734	7522735	1	C	core_nonrep	4	1	1
Rue3-1-31	1	7522735	7522736	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7527963	7527964	1	A	core_nonrep	8	1	1
Rue3-1-31	1	7531360	7531361	1	T	core_nonrep	4	1	1
Rue3-1-31	1	7539124	7539125	2	TG	core_nonrep	6	0.857143	1
Rue3-1-31	1	7539742	7539743	1	T	core_nonrep	7	1	1
Rue3-1-31	1	7540189	7540190	2	AG	core_nonrep	3	0.75	1
Rue3-1-31	1	7540190	7540191	1	C	core_nonrep	5	1	1
Rue3-1-31	1	7542729	7542730	1	A	core_nonrep	6	1	1
Rue3-1-31	1	7572672	7572673	1	A	core_nonrep	11	1	1
Rue3-1-31	1	7582083	7582084	1	T	core_nonrep	8	1	1
Rue3-1-31	1	7588660	7588661	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7604357	7604358	1	T	core_nonrep	11	0.875	1
Rue3-1-31	1	7604459	7604460	1	C	core_nonrep	8	0.875	1
Rue3-1-31	1	7605342	7605343	1	A	core_nonrep	8	1	1
Rue3-1-31	1	7629282	7629283	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	7629283	7629284	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	7636235	7636236	1	A	core_nonrep	18	1	1
Rue3-1-31	1	7636447	7636448	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7636448	7636449	1	C	core_nonrep	7	1	1
Rue3-1-31	1	7636449	7636450	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7636899	7636900	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7637003	7637004	1	G	nonrep	4	1	1
Rue3-1-31	1	7637238	7637239	1	C	core_nonrep	10	1	1
Rue3-1-31	1	7637362	7637363	1	T	core_nonrep	7	1	1
Rue3-1-31	1	7637684	7637685	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7638081	7638082	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7661024	7661025	1	T	core_nonrep	9	0.9	1
Rue3-1-31	1	7666433	7666434	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7674384	7674385	1	T	core_nonrep	9	1	1
Rue3-1-31	1	7675988	7675989	1	T	core_nonrep	3	1	1
Rue3-1-31	1	7679703	7679704	1	C	core_nonrep	6	1	1
Rue3-1-31	1	7689861	7689862	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	7689885	7689886	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7695950	7695951	1	A	core_nonrep	4	1	1
Rue3-1-31	1	7696079	7696080	1	T	nonrep	3	0.75	1
Rue3-1-31	1	7709704	7709705	3	TTG	core_nonrep	6	1	1.22222
Rue3-1-31	1	7716053	7716054	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7716721	7716722	1	A	core_nonrep	6	1	1
Rue3-1-31	1	7717077	7717078	1	C	core_nonrep	20	1	1
Rue3-1-31	1	7724206	7724207	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7725207	7725208	1	T	nonrep	3	0.75	1
Rue3-1-31	1	7725259	7725260	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7725627	7725628	1	T	nonrep	4	0.8	1
Rue3-1-31	1	7732311	7732312	1	T	core_nonrep	15	0.916667	1
Rue3-1-31	1	7733096	7733097	1	G	core_nonrep	5	1	1
Rue3-1-31	1	7751033	7751034	1	C	core_nonrep	6	1	1
Rue3-1-31	1	7751101	7751102	1	A	core_nonrep	10	1	1
Rue3-1-31	1	7753461	7753462	1	G	core_nonrep	8	1	1
Rue3-1-31	1	7754311	7754312	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	7754355	7754356	1	G	nonrep	3	0.75	1
Rue3-1-31	1	7754362	7754363	1	T	core_nonrep	4	1	1
Rue3-1-31	1	7757681	7757682	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	7764575	7764576	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	7764577	7764578	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	1	7784139	7784140	1	A	core_nonrep	3	1	1
Rue3-1-31	1	7784396	7784397	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	7784775	7784776	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7785594	7785595	1	T	core_nonrep	7	1	1
Rue3-1-31	1	7795208	7795209	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	7795303	7795304	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	7803822	7803823	1	G	core_nonrep	11	0.9	1
Rue3-1-31	1	7809538	7809539	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	7810958	7810959	1	C	core_nonrep	4	1	1
Rue3-1-31	1	7814350	7814351	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7821576	7821577	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	7831266	7831267	1	A	nonrep	3	0.75	1
Rue3-1-31	1	7846101	7846102	1	A	nonrep	3	0.75	1
Rue3-1-31	1	7847697	7847698	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7848045	7848046	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	7853031	7853032	2	TC	core_nonrep	5	0.8	1
Rue3-1-31	1	7857293	7857294	2	CA	core_nonrep	6	1	1
Rue3-1-31	1	7866023	7866024	1	T	core_nonrep	5	1	1
Rue3-1-31	1	7866697	7866698	1	T	core_nonrep	12	0.785714	1
Rue3-1-31	1	7877407	7877408	1	G	core_nonrep	17	1	1
Rue3-1-31	1	7889270	7889271	1	C	core_nonrep	6	1	1
Rue3-1-31	1	7893640	7893641	2	AG	core_nonrep	11	1	1
Rue3-1-31	1	7901396	7901397	1	T	core_nonrep	18	1	1
Rue3-1-31	1	7903466	7903467	1	T	core_nonrep	8	1	1
Rue3-1-31	1	7905637	7905638	1	A	nonrep	3	1	1
Rue3-1-31	1	7905656	7905657	1	T	core_nonrep	6	1	1
Rue3-1-31	1	7914744	7914745	1	G	core_nonrep	6	1	1
Rue3-1-31	1	7938350	7938351	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	7945964	7945965	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7947281	7947282	1	C	core_nonrep	3	1	1
Rue3-1-31	1	7947295	7947296	1	G	core_nonrep	5	1	1
Rue3-1-31	1	7947717	7947718	1	A	nonrep	3	0.75	1
Rue3-1-31	1	7956016	7956017	1	A	core_nonrep	7	1	1
Rue3-1-31	1	7956152	7956153	1	A	nonrep	4	0.8	1
Rue3-1-31	1	7958347	7958348	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	7958349	7958350	1	G	core_nonrep	11	0.833333	1
Rue3-1-31	1	7958810	7958811	1	A	core_nonrep	9	1	1
Rue3-1-31	1	7974737	7974738	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	7984405	7984406	1	A	core_nonrep	5	1	1
Rue3-1-31	1	7987130	7987131	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	7989442	7989443	1	A	core_nonrep	9	1	1
Rue3-1-31	1	8022894	8022895	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	8040721	8040722	1	A	core_nonrep	11	1	1
Rue3-1-31	1	8058552	8058553	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	8058958	8058959	1	G	core_nonrep	5	1	1
Rue3-1-31	1	8061184	8061185	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	1	8063346	8063347	1	G	core_nonrep	7	1	1
Rue3-1-31	1	8071858	8071859	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8073043	8073044	1	T	core_nonrep	11	0.875	1
Rue3-1-31	1	8080470	8080471	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	8081301	8081302	1	A	core_nonrep	11	1	1
Rue3-1-31	1	8082097	8082098	1	A	core_nonrep	12	1	1
Rue3-1-31	1	8083118	8083119	1	T	core_nonrep	7	1	1
Rue3-1-31	1	8098913	8098914	1	T	nonrep	4	1	1
Rue3-1-31	1	8098914	8098915	1	C	nonrep	4	1	1
Rue3-1-31	1	8098978	8098979	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8102225	8102226	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	8117326	8117327	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	8136109	8136110	1	A	core_nonrep	9	1	1
Rue3-1-31	1	8137817	8137818	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8138182	8138183	1	T	core_nonrep	3	1	1
Rue3-1-31	1	8139063	8139064	1	T	core_nonrep	9	1	1
Rue3-1-31	1	8140092	8140093	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8143518	8143519	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	8147783	8147784	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	8153613	8153614	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	1	8153614	8153615	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	8153640	8153641	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8155718	8155719	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	8157182	8157183	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	8159599	8159600	1	G	core_nonrep	12	0.857143	1
Rue3-1-31	1	8160712	8160713	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	8162026	8162027	1	G	core_nonrep	3	1	1
Rue3-1-31	1	8163661	8163662	1	C	core_nonrep	7	1	1
Rue3-1-31	1	8164071	8164072	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	8175575	8175576	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	1	8180463	8180464	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	1	8183534	8183535	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8183938	8183939	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	8184684	8184685	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8184685	8184686	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8184785	8184786	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	8184787	8184788	1	A	core_nonrep	9	0.8	1
Rue3-1-31	1	8185214	8185215	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8185443	8185444	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8203765	8203766	1	A	nonrep	4	0.8	1
Rue3-1-31	1	8227125	8227126	1	T	nonrep	3	0.75	1
Rue3-1-31	1	8234180	8234181	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	8235866	8235867	2	TG	core_nonrep	4	0.8	1
Rue3-1-31	1	8252057	8252058	1	G	nonrep	3	0.75	1
Rue3-1-31	1	8252226	8252227	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	8256589	8256590	1	T	core_nonrep	11	1	1
Rue3-1-31	1	8260784	8260785	3	AAA	core_nonrep	5	0.8	1
Rue3-1-31	1	8276310	8276311	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8281008	8281009	1	A	core_nonrep	21	0.9	1
Rue3-1-31	1	8292399	8292400	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8292573	8292574	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8294599	8294600	1	T	core_nonrep	8	1	1
Rue3-1-31	1	8298974	8298975	2	TG	core_nonrep	7	0.875	1
Rue3-1-31	1	8299539	8299540	1	T	core_nonrep	10	1	1
Rue3-1-31	1	8302684	8302685	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8318876	8318877	1	T	nonrep	4	0.8	1
Rue3-1-31	1	8322962	8322963	1	G	core_nonrep	16	1	1
Rue3-1-31	1	8323712	8323713	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8330929	8330930	1	T	core_nonrep	3	0.75	1.25
Rue3-1-31	1	8333263	8333264	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	8341548	8341549	1	A	core_nonrep	12	1	1
Rue3-1-31	1	8347928	8347929	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	8353244	8353245	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8353985	8353986	1	T	core_nonrep	10	1	1
Rue3-1-31	1	8354586	8354587	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8360538	8360539	1	G	core_nonrep	12	1	1
Rue3-1-31	1	8372636	8372637	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8374302	8374303	1	G	core_nonrep	4	1	1
Rue3-1-31	1	8386770	8386771	1	C	core_nonrep	6	1	1
Rue3-1-31	1	8392650	8392651	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8392912	8392913	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8393906	8393907	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8394459	8394460	1	T	nonrep	3	0.75	1
Rue3-1-31	1	8394462	8394463	2	AC	core_nonrep	3	1	1
Rue3-1-31	1	8406842	8406843	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	8406846	8406847	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8408542	8408543	1	A	core_nonrep	8	1	1
Rue3-1-31	1	8414077	8414078	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	8414115	8414116	1	A	core_nonrep	19	0.882353	1
Rue3-1-31	1	8416596	8416597	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	8416908	8416909	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	8416910	8416911	1	C	core_nonrep	5	1	1
Rue3-1-31	1	8417111	8417112	3	TCT	core_nonrep	7	0.75	1.13333
Rue3-1-31	1	8431262	8431263	1	C	core_nonrep	8	0.714286	1
Rue3-1-31	1	8438803	8438804	1	A	nonrep	3	1	1
Rue3-1-31	1	8441087	8441088	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	8441505	8441506	1	T	core_nonrep	8	1	1
Rue3-1-31	1	8441552	8441553	1	A	nonrep	6	0.857143	1
Rue3-1-31	1	8443209	8443210	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8444396	8444397	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8444472	8444473	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8447373	8447374	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8481636	8481637	1	T	core_nonrep	3	1	1
Rue3-1-31	1	8487320	8487321	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8487409	8487410	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8487779	8487780	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	8493105	8493106	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	8493225	8493226	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8493513	8493514	2	CT	core_nonrep	6	1	1
Rue3-1-31	1	8495961	8495962	1	A	nonrep	3	1	1
Rue3-1-31	1	8497982	8497983	1	G	core_nonrep	7	0.75	1.33333
Rue3-1-31	1	8498294	8498295	1	C	core_nonrep	5	1	1
Rue3-1-31	1	8498674	8498675	3	GGC	core_nonrep	4	1	1
Rue3-1-31	1	8498751	8498752	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8500314	8500315	1	A	core_nonrep	13	1	1
Rue3-1-31	1	8501763	8501764	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	8505654	8505655	1	T	core_nonrep	10	1	1
Rue3-1-31	1	8507909	8507910	1	C	core_nonrep	12	1	1
Rue3-1-31	1	8511513	8511514	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8512929	8512930	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8512936	8512937	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	8512937	8512938	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	8513228	8513229	1	G	core_nonrep	10	0.777778	1
Rue3-1-31	1	8514414	8514415	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8517236	8517237	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	8517438	8517439	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	8532717	8532718	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8538208	8538209	1	T	core_nonrep	7	1	1
Rue3-1-31	1	8540648	8540649	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8540661	8540662	2	CT	core_nonrep	6	0.75	1
Rue3-1-31	1	8542150	8542151	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8542800	8542801	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8543740	8543741	1	C	core_nonrep	6	0.75	1
Rue3-1-31	1	8549256	8549257	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8551165	8551166	1	G	core_nonrep	23	1	1
Rue3-1-31	1	8559874	8559875	1	T	core_nonrep	9	1	1
Rue3-1-31	1	8559891	8559892	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	8559976	8559977	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	1	8561815	8561816	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	8572367	8572368	1	T	nonrep	3	1	1
Rue3-1-31	1	8572469	8572470	1	G	core_nonrep	7	1	1
Rue3-1-31	1	8574355	8574356	1	A	core_nonrep	10	1	1
Rue3-1-31	1	8574356	8574357	1	G	core_nonrep	10	1	1
Rue3-1-31	1	8582180	8582181	1	A	core_nonrep	12	0.9	1
Rue3-1-31	1	8582241	8582242	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	8586374	8586375	1	T	core_nonrep	7	1	1
Rue3-1-31	1	8586766	8586767	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8586773	8586774	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	8591983	8591984	1	G	core_nonrep	10	0.8	1
Rue3-1-31	1	8595400	8595401	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	8597778	8597779	1	C	core_nonrep	5	1	1
Rue3-1-31	1	8598072	8598073	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	8599942	8599943	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	8599944	8599945	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	8600312	8600313	1	G	core_nonrep	4	1	1
Rue3-1-31	1	8600579	8600580	1	C	core_nonrep	13	0.923077	1
Rue3-1-31	1	8609151	8609152	1	T	nonrep	3	0.75	1
Rue3-1-31	1	8623624	8623625	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8623818	8623819	1	G	nonrep	3	0.75	1
Rue3-1-31	1	8626039	8626040	1	G	core_nonrep	14	1	1
Rue3-1-31	1	8642988	8642989	1	T	core_nonrep	10	1	1
Rue3-1-31	1	8646150	8646151	1	G	core_nonrep	4	0.75	1.42857
Rue3-1-31	1	8656391	8656392	1	G	core_nonrep	10	1	1
Rue3-1-31	1	8659325	8659326	1	G	core_nonrep	12	1	1
Rue3-1-31	1	8659553	8659554	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	8660737	8660738	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	8660739	8660740	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	8661202	8661203	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	8661218	8661219	1	C	core_nonrep	8	1	1
Rue3-1-31	1	8661489	8661490	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8661491	8661492	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	8665484	8665485	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	8666468	8666469	1	G	core_nonrep	6	1	1
Rue3-1-31	1	8670812	8670813	1	A	core_nonrep	9	1	1
Rue3-1-31	1	8672774	8672775	2	GA	core_nonrep	5	0.714286	1
Rue3-1-31	1	8673198	8673199	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8673199	8673200	1	G	core_nonrep	4	1	1
Rue3-1-31	1	8673238	8673239	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8674174	8674175	2	AA	core_nonrep	17	0.882353	1
Rue3-1-31	1	8674175	8674176	1	C	core_nonrep	15	0.9375	1
Rue3-1-31	1	8674614	8674615	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	8675374	8675375	1	T	core_nonrep	6	1	1
Rue3-1-31	1	8675696	8675697	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	8675902	8675903	1	T	nonrep	3	1	1
Rue3-1-31	1	8677400	8677401	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8677573	8677574	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8679733	8679734	1	C	core_nonrep	3	1	1
Rue3-1-31	1	8681939	8681940	1	T	core_nonrep	3	1	1
Rue3-1-31	1	8683404	8683405	1	G	core_nonrep	9	1	1
Rue3-1-31	1	8683799	8683800	1	C	core_nonrep	7	1	1
Rue3-1-31	1	8683984	8683985	1	A	core_nonrep	9	1	1
Rue3-1-31	1	8684299	8684300	1	T	core_nonrep	15	1	1
Rue3-1-31	1	8689011	8689012	1	T	core_nonrep	18	0.9375	1
Rue3-1-31	1	8689462	8689463	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	8689804	8689805	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8695122	8695123	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	1	8695938	8695939	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	8696522	8696523	1	T	core_nonrep	7	1	1
Rue3-1-31	1	8696756	8696757	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	1	8697798	8697799	1	T	core_nonrep	8	1	1
Rue3-1-31	1	8698218	8698219	1	T	core_nonrep	4	1	1
Rue3-1-31	1	8698499	8698500	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8708657	8708658	1	T	core_nonrep	7	0.8	1
Rue3-1-31	1	8709343	8709344	1	T	core_nonrep	10	0.769231	1
Rue3-1-31	1	8709346	8709347	1	G	core_nonrep	10	0.833333	1
Rue3-1-31	1	8709848	8709849	1	A	core_nonrep	12	1	1
Rue3-1-31	1	8713016	8713017	1	G	core_nonrep	11	0.9	1
Rue3-1-31	1	8715312	8715313	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8715639	8715640	1	A	core_nonrep	9	1	1
Rue3-1-31	1	8719181	8719182	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8723679	8723680	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	8726863	8726864	1	T	nonrep	3	0.75	1
Rue3-1-31	1	8726919	8726920	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	8729084	8729085	1	A	core_nonrep	5	1	1
Rue3-1-31	1	8739538	8739539	2	CT	nonrep	3	0.75	1
Rue3-1-31	1	8741183	8741184	1	T	nonrep	3	0.75	1
Rue3-1-31	1	8744507	8744508	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	8746882	8746883	1	T	core_nonrep	9	1	1
Rue3-1-31	1	8756022	8756023	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8757212	8757213	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	1	8838937	8838938	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8839761	8839762	1	T	core_nonrep	5	1	1
Rue3-1-31	1	8842502	8842503	1	T	core_nonrep	3	1	1
Rue3-1-31	1	8843358	8843359	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8843817	8843818	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	8848074	8848075	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8848620	8848621	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	8855480	8855481	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	8858610	8858611	1	A	core_nonrep	4	1	1
Rue3-1-31	1	8874367	8874368	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	8876083	8876084	2	AA	core_nonrep	7	0.7	1
Rue3-1-31	1	8876373	8876374	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	8877713	8877714	1	C	core_nonrep	7	1	1
Rue3-1-31	1	8899012	8899013	1	A	core_nonrep	7	1	1
Rue3-1-31	1	8900026	8900027	1	T	core_nonrep	3	1	1
Rue3-1-31	1	8901884	8901885	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	8904455	8904456	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8909773	8909774	1	A	nonrep	4	0.8	1
Rue3-1-31	1	8924630	8924631	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	8942357	8942358	1	T	core_nonrep	11	1	1
Rue3-1-31	1	8943467	8943468	1	A	core_nonrep	13	1	1
Rue3-1-31	1	8947940	8947941	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8975866	8975867	1	G	core_nonrep	11	0.909091	1
Rue3-1-31	1	8979080	8979081	1	C	core_nonrep	8	1	1
Rue3-1-31	1	8979382	8979383	3	ACA	core_nonrep	7	0.714286	1
Rue3-1-31	1	8979467	8979468	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	8979825	8979826	1	A	nonrep	4	1	1
Rue3-1-31	1	8979847	8979848	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	8986597	8986598	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	8986983	8986984	1	C	core_nonrep	4	1	1
Rue3-1-31	1	8987022	8987023	1	A	core_nonrep	6	1	1
Rue3-1-31	1	8987024	8987025	2	TT	core_nonrep	6	0.833333	1
Rue3-1-31	1	8987914	8987915	1	T	core_nonrep	7	1	1
Rue3-1-31	1	8987929	8987930	2	AC	core_nonrep	7	0.857143	1
Rue3-1-31	1	8987946	8987947	1	C	core_nonrep	10	1	1
Rue3-1-31	1	8990946	8990947	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	8991620	8991621	1	A	core_nonrep	3	1	1
Rue3-1-31	1	8993341	8993342	1	A	core_nonrep	9	1	1
Rue3-1-31	1	9003851	9003852	1	A	core_nonrep	11	1	1
Rue3-1-31	1	9004271	9004272	2	CA	core_nonrep	6	1	1
Rue3-1-31	1	9032844	9032845	1	T	core_nonrep	9	1	1
Rue3-1-31	1	9043621	9043622	1	T	core_nonrep	9	1	1
Rue3-1-31	1	9043738	9043739	1	C	core_nonrep	4	1	1
Rue3-1-31	1	9049927	9049928	2	AA	core_nonrep	7	0.7	1
Rue3-1-31	1	9054886	9054887	3	CTT	core_nonrep	10	0.9	1
Rue3-1-31	1	9055650	9055651	1	A	core_nonrep	8	1	1
Rue3-1-31	1	9058358	9058359	1	T	core_nonrep	11	1	1
Rue3-1-31	1	9060437	9060438	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	9060550	9060551	1	T	core_nonrep	9	1	1
Rue3-1-31	1	9061308	9061309	1	A	nonrep	3	0.75	1
Rue3-1-31	1	9063529	9063530	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	9066890	9066891	1	A	nonrep	3	0.75	1
Rue3-1-31	1	9080108	9080109	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9082533	9082534	1	T	core_nonrep	10	0.875	1.0625
Rue3-1-31	1	9086079	9086080	1	C	core_nonrep	8	1	1
Rue3-1-31	1	9094974	9094975	1	G	nonrep	5	0.714286	1
Rue3-1-31	1	9095013	9095014	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9099793	9099794	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	9100553	9100554	2	AC	core_nonrep	6	1	1
Rue3-1-31	1	9101071	9101072	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	9104735	9104736	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	1	9117884	9117885	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	1	9135886	9135887	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	9137691	9137692	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	9146864	9146865	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	9147221	9147222	1	T	nonrep	3	0.75	1
Rue3-1-31	1	9148121	9148122	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	9148399	9148400	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9166487	9166488	2	AC	core_nonrep	11	1	1
Rue3-1-31	1	9218700	9218701	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9218701	9218702	1	T	core_nonrep	4	1	1
Rue3-1-31	1	9219179	9219180	1	T	core_nonrep	4	1	1
Rue3-1-31	1	9219239	9219240	1	C	core_nonrep	5	1	1
Rue3-1-31	1	9219390	9219391	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	1	9221342	9221343	1	T	core_nonrep	6	1	1
Rue3-1-31	1	9222164	9222165	1	T	core_nonrep	8	1	1
Rue3-1-31	1	9222565	9222566	1	C	core_nonrep	11	1	1
Rue3-1-31	1	9223202	9223203	1	A	core_nonrep	9	1	1
Rue3-1-31	1	9224705	9224706	3	AAC	core_nonrep	8	0.8	1
Rue3-1-31	1	9229268	9229269	1	C	core_nonrep	3	1	1
Rue3-1-31	1	9235851	9235852	1	G	core_nonrep	5	1	1
Rue3-1-31	1	9236849	9236850	1	A	nonrep	3	0.75	1
Rue3-1-31	1	9240899	9240900	2	AA	core_nonrep	5	0.714286	1
Rue3-1-31	1	9241367	9241368	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	9243635	9243636	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	9251985	9251986	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9273615	9273616	2	CT	core_nonrep	4	1	1
Rue3-1-31	1	9286410	9286411	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9290622	9290623	1	T	nonrep	4	0.8	1
Rue3-1-31	1	9298387	9298388	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	9298740	9298741	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	9305766	9305767	1	A	nonrep	3	0.75	1
Rue3-1-31	1	9307712	9307713	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	9309692	9309693	1	C	core_nonrep	9	1	1
Rue3-1-31	1	9311072	9311073	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	9316921	9316922	1	T	core_nonrep	3	1	1
Rue3-1-31	1	9324750	9324751	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9328167	9328168	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	9334155	9334156	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	9353272	9353273	2	AC	core_nonrep	6	1	1
Rue3-1-31	1	9358250	9358251	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	9358253	9358254	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	9365908	9365909	2	TA	core_nonrep	5	1	1
Rue3-1-31	1	9372525	9372526	1	C	core_nonrep	18	1	1
Rue3-1-31	1	9378904	9378905	1	T	core_nonrep	3	1	1
Rue3-1-31	1	9381253	9381254	1	T	core_nonrep	5	1	1
Rue3-1-31	1	9384041	9384042	1	T	core_nonrep	6	1	1
Rue3-1-31	1	9399247	9399248	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	1	9400206	9400207	1	A	nonrep	3	1	1
Rue3-1-31	1	9400511	9400512	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9400826	9400827	1	A	core_nonrep	8	1	1
Rue3-1-31	1	9400988	9400989	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	9404454	9404455	1	T	core_nonrep	3	1	1
Rue3-1-31	1	9406138	9406139	1	G	core_nonrep	11	1	1
Rue3-1-31	1	9406379	9406380	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	9406557	9406558	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9406933	9406934	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	9414851	9414852	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	9414856	9414857	1	T	core_nonrep	8	1	1
Rue3-1-31	1	9416153	9416154	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	9419020	9419021	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	1	9420246	9420247	1	A	core_nonrep	6	1	1
Rue3-1-31	1	9420435	9420436	1	A	core_nonrep	12	1	1
Rue3-1-31	1	9425023	9425024	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	9425551	9425552	1	A	core_nonrep	13	0.846154	1
Rue3-1-31	1	9429302	9429303	1	T	core_nonrep	8	1	1
Rue3-1-31	1	9429759	9429760	1	C	core_nonrep	9	0.875	1
Rue3-1-31	1	9429829	9429830	1	T	core_nonrep	6	1	1
Rue3-1-31	1	9430639	9430640	1	T	core_nonrep	12	0.818182	1
Rue3-1-31	1	9431883	9431884	3	TAA	core_nonrep	7	0.7	1
Rue3-1-31	1	9432601	9432602	1	C	core_nonrep	20	1	1
Rue3-1-31	1	9439461	9439462	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	9446739	9446740	1	G	core_nonrep	7	1	1
Rue3-1-31	1	9446787	9446788	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9446903	9446904	1	G	core_nonrep	10	1	1
Rue3-1-31	1	9448938	9448939	1	A	core_nonrep	9	0.8	1
Rue3-1-31	1	9453968	9453969	1	A	core_nonrep	8	1	1
Rue3-1-31	1	9456365	9456366	3	GAC	core_nonrep	15	0.933333	1
Rue3-1-31	1	9458243	9458244	1	A	core_nonrep	3	1	1
Rue3-1-31	1	9458801	9458802	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9459393	9459394	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	9459586	9459587	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	9459587	9459588	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	9460852	9460853	1	A	core_nonrep	9	1	1
Rue3-1-31	1	9464443	9464444	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9468440	9468441	1	T	core_nonrep	7	1	1
Rue3-1-31	1	9473051	9473052	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	9482629	9482630	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	9495096	9495097	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	9499374	9499375	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	9504817	9504818	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	9509248	9509249	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	9510495	9510496	2	TG	core_nonrep	6	0.714286	1
Rue3-1-31	1	9512841	9512842	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	1	9546949	9546950	1	T	core_nonrep	9	1	1
Rue3-1-31	1	9555592	9555593	2	AA	core_nonrep	5	0.714286	1
Rue3-1-31	1	9558581	9558582	1	G	core_nonrep	11	0.909091	1
Rue3-1-31	1	9564520	9564521	1	A	nonrep	3	1	1
Rue3-1-31	1	9564577	9564578	1	C	core_nonrep	5	1	1
Rue3-1-31	1	9565326	9565327	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	9628490	9628491	3	TAA	core_nonrep	4	1	1
Rue3-1-31	1	9631574	9631575	1	T	core_nonrep	6	1	1
Rue3-1-31	1	9643175	9643176	1	A	core_nonrep	6	1	1
Rue3-1-31	1	9649517	9649518	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	9653964	9653965	1	A	core_nonrep	7	1	1
Rue3-1-31	1	9661915	9661916	2	AA	core_nonrep	9	1	1
Rue3-1-31	1	9667382	9667383	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	9667508	9667509	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9671087	9671088	1	T	core_nonrep	19	1	1
Rue3-1-31	1	9671234	9671235	2	AA	core_nonrep	15	0.875	1
Rue3-1-31	1	9671589	9671590	2	TA	core_nonrep	5	1	1
Rue3-1-31	1	9671774	9671775	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	1	9694179	9694180	1	T	core_nonrep	10	1	1
Rue3-1-31	1	9697730	9697731	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9698061	9698062	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9704133	9704134	1	T	core_nonrep	13	0.857143	1
Rue3-1-31	1	9704134	9704135	1	C	core_nonrep	17	1	1
Rue3-1-31	1	9705268	9705269	1	G	core_nonrep	12	1	1
Rue3-1-31	1	9706277	9706278	1	A	core_nonrep	3	1	1
Rue3-1-31	1	9708910	9708911	1	A	core_nonrep	7	0.8	1
Rue3-1-31	1	9725377	9725378	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	1	9730757	9730758	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9734848	9734849	1	T	core_nonrep	11	0.714286	1
Rue3-1-31	1	9739416	9739417	1	T	core_nonrep	5	1	1
Rue3-1-31	1	9750587	9750588	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	9761732	9761733	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	9777650	9777651	1	T	core_nonrep	10	0.8	1
Rue3-1-31	1	9777967	9777968	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	1	9778170	9778171	3	TAG	core_nonrep	5	0.8	1
Rue3-1-31	1	9778848	9778849	1	A	core_nonrep	3	1	1
Rue3-1-31	1	9784089	9784090	1	A	core_nonrep	5	1	1
Rue3-1-31	1	9785039	9785040	1	C	nonrep	3	1	1
Rue3-1-31	1	9785450	9785451	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	9785679	9785680	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	9785904	9785905	1	T	core_nonrep	6	1	1
Rue3-1-31	1	9786702	9786703	1	T	core_nonrep	7	1	1
Rue3-1-31	1	9787455	9787456	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9793998	9793999	1	C	core_nonrep	14	0.923077	1
Rue3-1-31	1	9795512	9795513	1	G	core_nonrep	7	1	1
Rue3-1-31	1	9802731	9802732	1	T	core_nonrep	11	0.769231	1
Rue3-1-31	1	9808123	9808124	1	T	core_nonrep	7	1	1
Rue3-1-31	1	9810539	9810540	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	9818557	9818558	1	T	core_nonrep	3	1	1
Rue3-1-31	1	9821282	9821283	1	G	core_nonrep	4	1	1
Rue3-1-31	1	9822589	9822590	3	ATG	core_nonrep	6	0.857143	1
Rue3-1-31	1	9834520	9834521	1	A	core_nonrep	11	1	1
Rue3-1-31	1	9843684	9843685	1	T	core_nonrep	8	1	1
Rue3-1-31	1	9844227	9844228	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	9845335	9845336	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9848602	9848603	1	T	core_nonrep	5	1	1
Rue3-1-31	1	9881787	9881788	1	A	core_nonrep	8	1	1
Rue3-1-31	1	9883087	9883088	1	A	core_nonrep	9	1	1
Rue3-1-31	1	9885106	9885107	1	T	core_nonrep	4	1	1
Rue3-1-31	1	9885462	9885463	2	TT	core_nonrep	6	0.714286	1
Rue3-1-31	1	9886414	9886415	1	C	core_nonrep	11	1	1
Rue3-1-31	1	9888939	9888940	1	T	nonrep	4	0.8	1
Rue3-1-31	1	9904862	9904863	1	A	core_nonrep	3	1	1
Rue3-1-31	1	9911086	9911087	2	AT	core_nonrep	11	0.714286	1
Rue3-1-31	1	9913727	9913728	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	9914620	9914621	1	T	nonrep	3	1	1
Rue3-1-31	1	9915343	9915344	1	C	core_nonrep	4	1	1
Rue3-1-31	1	9919895	9919896	2	TT	core_nonrep	10	0.692308	1
Rue3-1-31	1	9934159	9934160	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	9939583	9939584	1	T	core_nonrep	7	1	1
Rue3-1-31	1	9949962	9949963	1	G	core_nonrep	20	0.95	1
Rue3-1-31	1	9951469	9951470	1	G	core_nonrep	8	1	1
Rue3-1-31	1	9952605	9952606	1	T	core_nonrep	10	1	1
Rue3-1-31	1	9959271	9959272	1	A	core_nonrep	4	1	1
Rue3-1-31	1	9972663	9972664	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	9973884	9973885	1	T	core_nonrep	4	1	1
Rue3-1-31	1	9979199	9979200	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	9979200	9979201	1	C	core_nonrep	7	1	1
Rue3-1-31	1	9992683	9992684	1	T	core_nonrep	6	1	1
Rue3-1-31	1	10000189	10000190	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	10001399	10001400	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10006041	10006042	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	10007470	10007471	1	A	core_nonrep	8	0.7	1
Rue3-1-31	1	10015063	10015064	1	G	core_nonrep	11	1	1
Rue3-1-31	1	10015713	10015714	1	A	core_nonrep	3	1	1
Rue3-1-31	1	10023429	10023430	1	G	core_nonrep	6	1	1
Rue3-1-31	1	10023466	10023467	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	1	10023671	10023672	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10025381	10025382	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	10025382	10025383	1	A	core_nonrep	7	1	1
Rue3-1-31	1	10025704	10025705	1	A	core_nonrep	9	0.8	1
Rue3-1-31	1	10026821	10026822	1	A	core_nonrep	3	1	1
Rue3-1-31	1	10029122	10029123	1	C	core_nonrep	4	1	1
Rue3-1-31	1	10042916	10042917	1	A	core_nonrep	7	1	1
Rue3-1-31	1	10044103	10044104	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	1	10044178	10044179	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	10044454	10044455	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10045569	10045570	1	A	nonrep	3	0.75	1
Rue3-1-31	1	10046386	10046387	2	TC	core_nonrep	7	1	1
Rue3-1-31	1	10046430	10046431	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	10046601	10046602	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	1	10049605	10049606	2	CG	core_nonrep	6	1	1
Rue3-1-31	1	10050414	10050415	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10053089	10053090	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10056036	10056037	1	T	core_nonrep	3	1	1
Rue3-1-31	1	10057430	10057431	1	C	core_nonrep	5	1	1
Rue3-1-31	1	10061819	10061820	1	T	core_nonrep	5	1	1
Rue3-1-31	1	10062132	10062133	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10065050	10065051	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10070397	10070398	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	1	10077617	10077618	1	G	core_nonrep	4	1	1
Rue3-1-31	1	10083477	10083478	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	10085158	10085159	2	AC	core_nonrep	6	1	1
Rue3-1-31	1	10086738	10086739	1	T	core_nonrep	9	1	1
Rue3-1-31	1	10099803	10099804	1	T	core_nonrep	8	1	1
Rue3-1-31	1	10121778	10121779	1	G	core_nonrep	4	1	1
Rue3-1-31	1	10128319	10128320	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	1	10128512	10128513	2	GT	core_nonrep	6	0.833333	1
Rue3-1-31	1	10137726	10137727	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	10138596	10138597	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10138701	10138702	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	10141402	10141403	1	T	core_nonrep	8	1	1
Rue3-1-31	1	10146292	10146293	1	T	core_nonrep	3	1	1
Rue3-1-31	1	10148756	10148757	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	10150092	10150093	1	C	core_nonrep	11	1	1
Rue3-1-31	1	10157141	10157142	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	10157437	10157438	1	C	core_nonrep	9	1	1
Rue3-1-31	1	10164474	10164475	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10172161	10172162	2	TA	core_nonrep	4	0.8	1
Rue3-1-31	1	10172502	10172503	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	10178993	10178994	1	A	core_nonrep	17	0.875	1
Rue3-1-31	1	10180212	10180213	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10180422	10180423	1	A	core_nonrep	7	1	1
Rue3-1-31	1	10180789	10180790	1	A	core_nonrep	6	1	1
Rue3-1-31	1	10183178	10183179	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10184601	10184602	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	1	10186539	10186540	1	G	core_nonrep	4	1	1
Rue3-1-31	1	10187659	10187660	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	10187715	10187716	1	T	nonrep	4	1	1
Rue3-1-31	1	10189198	10189199	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10189250	10189251	1	C	core_nonrep	3	1	1
Rue3-1-31	1	10190328	10190329	2	CA	core_nonrep	9	0.875	1
Rue3-1-31	1	10190335	10190336	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	10190925	10190926	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	1	10194442	10194443	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	10194632	10194633	1	A	core_nonrep	13	1	1
Rue3-1-31	1	10194712	10194713	1	T	core_nonrep	11	1	1
Rue3-1-31	1	10195232	10195233	1	A	core_nonrep	10	1	1
Rue3-1-31	1	10196729	10196730	2	CC	core_nonrep	6	1	1
Rue3-1-31	1	10202604	10202605	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	10205168	10205169	1	A	core_nonrep	8	1	1
Rue3-1-31	1	10205710	10205711	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10207983	10207984	2	AT	core_nonrep	7	1	1
Rue3-1-31	1	10208357	10208358	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	10208359	10208360	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	10208514	10208515	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10210740	10210741	1	C	core_nonrep	11	1	1
Rue3-1-31	1	10212980	10212981	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10213971	10213972	1	A	core_nonrep	9	1	1
Rue3-1-31	1	10224795	10224796	1	A	core_nonrep	8	0.727273	1
Rue3-1-31	1	10232832	10232833	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	10240714	10240715	1	C	core_nonrep	7	1	1
Rue3-1-31	1	10245391	10245392	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	10247181	10247182	1	T	core_nonrep	3	1	1
Rue3-1-31	1	10250611	10250612	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10252999	10253000	1	T	core_nonrep	17	1	1
Rue3-1-31	1	10261863	10261864	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10263194	10263195	1	G	core_nonrep	8	1	1
Rue3-1-31	1	10264140	10264141	1	A	nonrep	3	1	1
Rue3-1-31	1	10264302	10264303	1	T	core_nonrep	9	1	1
Rue3-1-31	1	10268565	10268566	1	C	core	5	0.714286	1.18182
Rue3-1-31	1	10285724	10285725	1	T	core_nonrep	10	1	1
Rue3-1-31	1	10288837	10288838	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10289919	10289920	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10296043	10296044	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	10303271	10303272	1	T	core_nonrep	6	0.8	1.125
Rue3-1-31	1	10319624	10319625	1	A	core_nonrep	12	1	1
Rue3-1-31	1	10329433	10329434	1	G	core_nonrep	6	1	1
Rue3-1-31	1	10332180	10332181	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	10334611	10334612	1	A	core_nonrep	10	1	1
Rue3-1-31	1	10339925	10339926	1	C	core_nonrep	12	1	1
Rue3-1-31	1	10352345	10352346	1	T	core_nonrep	8	1	1
Rue3-1-31	1	10354597	10354598	1	T	core_nonrep	3	1	1
Rue3-1-31	1	10363289	10363290	1	G	core_nonrep	10	1	1
Rue3-1-31	1	10363927	10363928	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	10372882	10372883	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	10396901	10396902	2	AG	core_nonrep	17	1	1
Rue3-1-31	1	10397972	10397973	2	AT	core_nonrep	6	1	1
Rue3-1-31	1	10400304	10400305	1	T	core_nonrep	10	0.875	1
Rue3-1-31	1	10407428	10407429	1	A	core_nonrep	13	1	1
Rue3-1-31	1	10410814	10410815	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	10417124	10417125	1	A	core_nonrep	6	1	1
Rue3-1-31	1	10417290	10417291	1	A	core_nonrep	6	1	1
Rue3-1-31	1	10431781	10431782	1	T	core_nonrep	8	1	1
Rue3-1-31	1	10432488	10432489	1	T	core_nonrep	5	1	1
Rue3-1-31	1	10433986	10433987	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	1	10434798	10434799	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	10440664	10440665	1	T	core_nonrep	6	1	1
Rue3-1-31	1	10443794	10443795	1	T	core_nonrep	5	1	1
Rue3-1-31	1	10445376	10445377	1	G	core_nonrep	13	1	1
Rue3-1-31	1	10447240	10447241	1	A	core_nonrep	8	0.727273	1
Rue3-1-31	1	10447792	10447793	1	C	core_nonrep	3	1	1
Rue3-1-31	1	10448200	10448201	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	10450682	10450683	1	G	core_nonrep	3	1	1
Rue3-1-31	1	10450927	10450928	1	A	core_nonrep	9	1	1
Rue3-1-31	1	10452170	10452171	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	10459488	10459489	1	T	core_nonrep	5	1	1
Rue3-1-31	1	10459957	10459958	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10460721	10460722	1	T	core_nonrep	6	1	1
Rue3-1-31	1	10461077	10461078	2	AA	core_nonrep	7	1	1
Rue3-1-31	1	10461592	10461593	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	1	10462036	10462037	1	A	core_nonrep	16	1	1
Rue3-1-31	1	10462881	10462882	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	1	10473718	10473719	2	AG	core_nonrep	5	1	1
Rue3-1-31	1	10478953	10478954	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	1	10513037	10513038	1	G	core_nonrep	6	1	1
Rue3-1-31	1	10515990	10515991	1	G	core_nonrep	13	0.8	1
Rue3-1-31	1	10519919	10519920	1	G	core_nonrep	6	1	1
Rue3-1-31	1	10530187	10530188	1	A	nonrep	3	0.75	1
Rue3-1-31	1	10530467	10530468	1	T	core_nonrep	8	1	1
Rue3-1-31	1	10537335	10537336	1	A	core_nonrep	3	1	1
Rue3-1-31	1	10541754	10541755	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10568868	10568869	1	T	core_nonrep	4	0.8	1.16667
Rue3-1-31	1	10570564	10570565	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10575979	10575980	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	10575980	10575981	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	10578460	10578461	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	10578753	10578754	1	A	core_nonrep	4	1	1
Rue3-1-31	1	10586886	10586887	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	10590006	10590007	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10590008	10590009	1	C	core_nonrep	5	1	1
Rue3-1-31	1	10590101	10590102	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	10590445	10590446	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10611581	10611582	1	C	core_nonrep	24	0.909091	1
Rue3-1-31	1	10615179	10615180	1	A	core_nonrep	3	1	1
Rue3-1-31	1	10623151	10623152	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	10626893	10626894	2	AT	core_nonrep	8	0.8	1
Rue3-1-31	1	10627701	10627702	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10637698	10637699	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10643396	10643397	1	T	core_nonrep	20	1	1
Rue3-1-31	1	10646565	10646566	1	G	core_nonrep	4	1	1
Rue3-1-31	1	10649879	10649880	1	T	nonrep	3	0.75	1
Rue3-1-31	1	10667022	10667023	1	G	core_nonrep	5	1	1
Rue3-1-31	1	10671379	10671380	2	GC	core_nonrep	15	0.875	1
Rue3-1-31	1	10673293	10673294	1	G	core_nonrep	16	0.933333	1
Rue3-1-31	1	10693075	10693076	1	A	core_nonrep	16	1	1
Rue3-1-31	1	10737883	10737884	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	1	10740132	10740133	1	T	core_nonrep	7	1	1
Rue3-1-31	1	10770934	10770935	1	A	nonrep	3	0.75	1
Rue3-1-31	1	10791619	10791620	1	T	core_nonrep	10	1	1
Rue3-1-31	1	10793698	10793699	1	G	core_nonrep	8	1	1
Rue3-1-31	1	10794662	10794663	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10804807	10804808	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	10804808	10804809	1	G	core_nonrep	5	1	1
Rue3-1-31	1	10816758	10816759	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	10816759	10816760	2	CC	core_nonrep	8	1	1
Rue3-1-31	1	10819332	10819333	1	T	core_nonrep	5	1	1
Rue3-1-31	1	10831656	10831657	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	10831657	10831658	1	A	core_nonrep	10	1	1
Rue3-1-31	1	10833596	10833597	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	10846327	10846328	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	10868284	10868285	2	TC	core_nonrep	3	0.75	1
Rue3-1-31	1	10875575	10875576	3	TTA	core_nonrep	8	0.888889	1
Rue3-1-31	1	10879090	10879091	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	1	10881991	10881992	1	T	core_nonrep	10	1	1
Rue3-1-31	1	10887251	10887252	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10889377	10889378	1	C	core_nonrep	13	1	1
Rue3-1-31	1	10896894	10896895	1	A	core_nonrep	9	1	1
Rue3-1-31	1	10897699	10897700	1	T	core_nonrep	10	1	1
Rue3-1-31	1	10897749	10897750	1	A	core_nonrep	5	1	1
Rue3-1-31	1	10897751	10897752	1	T	core_nonrep	6	1	1
Rue3-1-31	1	10897803	10897804	1	T	core_nonrep	4	1	1
Rue3-1-31	1	10900491	10900492	1	A	core_nonrep	8	1	1
Rue3-1-31	1	10914951	10914952	2	TA	core_nonrep	7	1	1.14286
Rue3-1-31	1	10922107	10922108	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	1	10926033	10926034	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	10939795	10939796	1	T	core_nonrep	23	1	1
Rue3-1-31	1	10957444	10957445	1	T	nonrep	4	1	1
Rue3-1-31	1	10958103	10958104	2	GA	core_nonrep	6	0.714286	1
Rue3-1-31	1	10964146	10964147	2	AA	core_nonrep	5	0.75	1
Rue3-1-31	1	10964151	10964152	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	10967431	10967432	1	T	core_nonrep	3	1	1
Rue3-1-31	1	10995984	10995985	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11003637	11003638	1	G	core_nonrep	20	1	1
Rue3-1-31	1	11006566	11006567	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11007921	11007922	1	A	core_nonrep	13	1	1
Rue3-1-31	1	11009044	11009045	1	A	core_nonrep	6	1	1
Rue3-1-31	1	11010684	11010685	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11011043	11011044	1	C	core_nonrep	17	1	1
Rue3-1-31	1	11012906	11012907	1	C	core_nonrep	5	1	1
Rue3-1-31	1	11012987	11012988	1	G	core_nonrep	3	1	1
Rue3-1-31	1	11013231	11013232	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11013238	11013239	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11017092	11017093	1	T	core_nonrep	13	0.818182	1
Rue3-1-31	1	11022889	11022890	1	T	core_nonrep	7	0.75	1.07692
Rue3-1-31	1	11024372	11024373	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	1	11024855	11024856	1	C	core_nonrep	6	1	1
Rue3-1-31	1	11025041	11025042	2	AA	core_nonrep	6	1	1
Rue3-1-31	1	11025373	11025374	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11025789	11025790	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	11051140	11051141	1	A	core	5	0.714286	1.2
Rue3-1-31	1	11063817	11063818	1	G	core_nonrep	3	1	1
Rue3-1-31	1	11063865	11063866	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11072842	11072843	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	1	11074244	11074245	3	AAA	core_nonrep	4	0.75	1
Rue3-1-31	1	11076672	11076673	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	11077235	11077236	1	G	core_nonrep	5	1	1
Rue3-1-31	1	11078581	11078582	1	T	nonrep	3	1	1
Rue3-1-31	1	11084883	11084884	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11087965	11087966	1	T	core_nonrep	15	0.928571	1
Rue3-1-31	1	11088197	11088198	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	11088425	11088426	1	A	nonrep	3	0.75	1
Rue3-1-31	1	11091084	11091085	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11091773	11091774	1	C	core_nonrep	8	1	1
Rue3-1-31	1	11107641	11107642	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11110724	11110725	1	G	core_nonrep	6	1	1
Rue3-1-31	1	11120023	11120024	1	C	core_nonrep	6	1	1
Rue3-1-31	1	11128828	11128829	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11135713	11135714	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11135971	11135972	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11136487	11136488	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	11137291	11137292	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	11137293	11137294	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	1	11137709	11137710	2	TG	core_nonrep	7	0.714286	1
Rue3-1-31	1	11137958	11137959	1	T	core_nonrep	11	0.833333	1
Rue3-1-31	1	11142492	11142493	1	T	core_nonrep	7	1	1
Rue3-1-31	1	11159856	11159857	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	1	11168222	11168223	2	AA	nonrep	3	0.75	1
Rue3-1-31	1	11172041	11172042	2	TT	core_nonrep	7	0.75	1
Rue3-1-31	1	11187674	11187675	1	A	nonrep	3	1	1
Rue3-1-31	1	11192925	11192926	1	G	core_nonrep	7	1	1
Rue3-1-31	1	11193527	11193528	1	A	nonrep	3	1	1
Rue3-1-31	1	11194896	11194897	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11196865	11196866	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11197540	11197541	2	TA	core_nonrep	5	1	1
Rue3-1-31	1	11201990	11201991	1	C	core_nonrep	9	0.833333	1
Rue3-1-31	1	11202135	11202136	1	G	nonrep	3	1	1
Rue3-1-31	1	11202151	11202152	2	TG	core_nonrep	4	1	1
Rue3-1-31	1	11202170	11202171	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11202824	11202825	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	11203268	11203269	1	T	core_nonrep	7	1	1
Rue3-1-31	1	11207237	11207238	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11210993	11210994	1	T	nonrep	3	0.75	1
Rue3-1-31	1	11219401	11219402	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	11219406	11219407	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	11221493	11221494	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11223314	11223315	1	T	nonrep	3	1	1
Rue3-1-31	1	11227252	11227253	1	G	core_nonrep	3	1	1
Rue3-1-31	1	11227956	11227957	1	T	nonrep	3	1	1
Rue3-1-31	1	11230950	11230951	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	11230951	11230952	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	11232089	11232090	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11232567	11232568	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11241952	11241953	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11263480	11263481	1	A	core_nonrep	8	1	1
Rue3-1-31	1	11267757	11267758	2	CT	core_nonrep	3	1	1
Rue3-1-31	1	11278437	11278438	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	1	11278559	11278560	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	11280636	11280637	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	11282417	11282418	1	G	core_nonrep	7	1	1
Rue3-1-31	1	11282418	11282419	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11288244	11288245	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	1	11294075	11294076	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11297576	11297577	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11321532	11321533	2	AG	core_nonrep	4	0.8	1
Rue3-1-31	1	11321928	11321929	1	C	core_nonrep	12	0.916667	1
Rue3-1-31	1	11326341	11326342	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	11328643	11328644	1	T	core_nonrep	7	1	1
Rue3-1-31	1	11329462	11329463	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	11333269	11333270	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11335815	11335816	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11338441	11338442	1	G	core_nonrep	6	1	1
Rue3-1-31	1	11342250	11342251	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11342552	11342553	1	A	nonrep	4	0.8	1
Rue3-1-31	1	11342743	11342744	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	11343621	11343622	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	1	11349434	11349435	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	11351243	11351244	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11355019	11355020	2	TA	core_nonrep	7	0.777778	1
Rue3-1-31	1	11355707	11355708	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11357486	11357487	1	G	core_nonrep	13	1	1
Rue3-1-31	1	11358547	11358548	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11364900	11364901	1	C	nonrep	5	0.714286	1
Rue3-1-31	1	11373694	11373695	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	11373968	11373969	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11375021	11375022	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	11375023	11375024	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	11375214	11375215	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11376486	11376487	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	11377690	11377691	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11379786	11379787	2	AA	core_nonrep	9	1	1
Rue3-1-31	1	11385203	11385204	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11390044	11390045	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	11392185	11392186	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11392301	11392302	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	11392482	11392483	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11394610	11394611	1	C	core_nonrep	6	1	1
Rue3-1-31	1	11415820	11415821	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11421970	11421971	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11426031	11426032	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11426679	11426680	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	11427638	11427639	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11427639	11427640	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11429573	11429574	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11430161	11430162	1	A	nonrep	4	0.8	1
Rue3-1-31	1	11433956	11433957	1	C	core_nonrep	16	1	1
Rue3-1-31	1	11441188	11441189	1	G	core_nonrep	3	1	1
Rue3-1-31	1	11442598	11442599	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11444962	11444963	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	11456273	11456274	1	A	core_nonrep	6	1	1
Rue3-1-31	1	11464062	11464063	2	TC	core_nonrep	9	1	1
Rue3-1-31	1	11475673	11475674	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	11475674	11475675	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11477245	11477246	1	C	core_nonrep	15	0.923077	1
Rue3-1-31	1	11480871	11480872	1	T	core_nonrep	10	1	1
Rue3-1-31	1	11480883	11480884	1	C	core_nonrep	10	1	1
Rue3-1-31	1	11481693	11481694	2	CT	core_nonrep	6	1	1
Rue3-1-31	1	11493828	11493829	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11494203	11494204	1	T	nonrep	3	1	1
Rue3-1-31	1	11495417	11495418	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	1	11496049	11496050	1	T	core_nonrep	13	0.8	1
Rue3-1-31	1	11496287	11496288	1	T	core_nonrep	8	1	1
Rue3-1-31	1	11496587	11496588	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11497396	11497397	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11498475	11498476	1	C	core_nonrep	7	1	1
Rue3-1-31	1	11498933	11498934	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	11498986	11498987	1	G	core_nonrep	12	0.9	1
Rue3-1-31	1	11499548	11499549	1	G	nonrep	3	1	1
Rue3-1-31	1	11500741	11500742	1	G	core_nonrep	7	1	1
Rue3-1-31	1	11501036	11501037	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	1	11513423	11513424	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	11513427	11513428	1	C	core_nonrep	3	1	1
Rue3-1-31	1	11523337	11523338	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11523794	11523795	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11524523	11524524	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11527707	11527708	2	CC	core_nonrep	4	1	1
Rue3-1-31	1	11528723	11528724	2	TC	nonrep	3	1	1
Rue3-1-31	1	11528767	11528768	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	1	11529267	11529268	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	11529437	11529438	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	11530152	11530153	1	T	core_nonrep	9	1	1
Rue3-1-31	1	11530854	11530855	1	A	core_nonrep	12	0.8	1
Rue3-1-31	1	11530965	11530966	1	G	core_nonrep	5	1	1
Rue3-1-31	1	11531361	11531362	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11531662	11531663	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	11543230	11543231	1	T	core_nonrep	8	1	1
Rue3-1-31	1	11543277	11543278	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11543556	11543557	1	A	nonrep	4	1	1
Rue3-1-31	1	11545963	11545964	1	T	core_nonrep	7	1	1
Rue3-1-31	1	11549436	11549437	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11550028	11550029	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11550074	11550075	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11556108	11556109	1	C	core_nonrep	22	0.894737	1
Rue3-1-31	1	11556329	11556330	1	A	core_nonrep	6	1	1
Rue3-1-31	1	11562721	11562722	2	AA	core_nonrep	10	0.9	1
Rue3-1-31	1	11565131	11565132	1	A	core_nonrep	8	1	1
Rue3-1-31	1	11568361	11568362	1	T	core_nonrep	11	0.9	1
Rue3-1-31	1	11571983	11571984	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11573685	11573686	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11575392	11575393	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	11578648	11578649	1	T	core_nonrep	27	1	1
Rue3-1-31	1	11579572	11579573	1	T	core_nonrep	11	1	1
Rue3-1-31	1	11583202	11583203	1	A	core_nonrep	10	1	1
Rue3-1-31	1	11583804	11583805	2	CC	core_nonrep	5	0.75	1.5
Rue3-1-31	1	11590728	11590729	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11595990	11595991	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	11604393	11604394	1	T	core_nonrep	10	1	1
Rue3-1-31	1	11611205	11611206	1	T	nonrep	6	0.857143	1
Rue3-1-31	1	11611896	11611897	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	11615764	11615765	1	G	core_nonrep	7	1	1
Rue3-1-31	1	11622465	11622466	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11623588	11623589	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	1	11625555	11625556	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	11634813	11634814	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11640676	11640677	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11642933	11642934	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	11654407	11654408	2	TT	core_nonrep	11	0.833333	1
Rue3-1-31	1	11654663	11654664	1	C	core_nonrep	5	1	1
Rue3-1-31	1	11670381	11670382	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	1	11672107	11672108	1	G	nonrep	4	1	1
Rue3-1-31	1	11673023	11673024	1	C	core_nonrep	10	1	1
Rue3-1-31	1	11676643	11676644	1	G	nonrep	3	1	1
Rue3-1-31	1	11677489	11677490	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	11677491	11677492	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11677552	11677553	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	11681676	11681677	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	1	11684872	11684873	1	T	core_nonrep	7	1	1
Rue3-1-31	1	11685001	11685002	2	GT	core_nonrep	4	1	1
Rue3-1-31	1	11685101	11685102	1	T	core_nonrep	10	0.8	1
Rue3-1-31	1	11687612	11687613	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	11691097	11691098	1	A	core_nonrep	11	1	1
Rue3-1-31	1	11691778	11691779	1	A	nonrep	3	0.75	1
Rue3-1-31	1	11703315	11703316	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11710482	11710483	1	C	core_nonrep	3	1	1
Rue3-1-31	1	11717790	11717791	1	A	core_nonrep	9	1	1
Rue3-1-31	1	11718121	11718122	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11720091	11720092	1	A	core_nonrep	6	1	1
Rue3-1-31	1	11723386	11723387	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	1	11727061	11727062	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11731500	11731501	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11733364	11733365	1	T	core_nonrep	8	1	1
Rue3-1-31	1	11734791	11734792	2	GT	core_nonrep	4	0.8	1
Rue3-1-31	1	11741701	11741702	1	A	core_nonrep	8	1	1
Rue3-1-31	1	11742807	11742808	2	GT	core_nonrep	10	1	1
Rue3-1-31	1	11749748	11749749	1	A	core_nonrep	9	1	1
Rue3-1-31	1	11749754	11749755	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	11755091	11755092	1	T	core_nonrep	11	1	1
Rue3-1-31	1	11755395	11755396	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11755895	11755896	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	11757899	11757900	1	T	core_nonrep	9	0.714286	1
Rue3-1-31	1	11759577	11759578	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	11764013	11764014	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	11764994	11764995	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	11769265	11769266	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	11776815	11776816	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11780636	11780637	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11783591	11783592	1	T	nonrep	3	0.75	1
Rue3-1-31	1	11794057	11794058	1	G	nonrep	3	0.75	1
Rue3-1-31	1	11795843	11795844	1	A	core_nonrep	11	1	1
Rue3-1-31	1	11811192	11811193	1	A	core_nonrep	23	0.875	1
Rue3-1-31	1	11815022	11815023	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11815191	11815192	2	AC	core_nonrep	6	0.857143	1
Rue3-1-31	1	11817607	11817608	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	11827070	11827071	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11827341	11827342	1	G	core_nonrep	16	0.923077	1
Rue3-1-31	1	11829610	11829611	1	A	core_nonrep	9	1	1
Rue3-1-31	1	11830798	11830799	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11856622	11856623	1	G	core_nonrep	11	1	1
Rue3-1-31	1	11864926	11864927	1	T	core_nonrep	3	1	1
Rue3-1-31	1	11867679	11867680	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	11867981	11867982	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	11867983	11867984	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11868297	11868298	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11870094	11870095	1	A	core_nonrep	9	1	1
Rue3-1-31	1	11870135	11870136	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11870567	11870568	1	T	core_nonrep	6	1	1
Rue3-1-31	1	11870741	11870742	1	T	nonrep	3	1	1
Rue3-1-31	1	11870899	11870900	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	11871329	11871330	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11871334	11871335	1	C	core_nonrep	3	1	1
Rue3-1-31	1	11873718	11873719	1	A	core_nonrep	5	1	1
Rue3-1-31	1	11873973	11873974	1	G	core_nonrep	3	1	1
Rue3-1-31	1	11877955	11877956	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11877959	11877960	1	G	core_nonrep	4	1	1
Rue3-1-31	1	11879387	11879388	1	T	nonrep	3	1	1
Rue3-1-31	1	11909310	11909311	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	11909312	11909313	1	G	core_nonrep	5	1	1
Rue3-1-31	1	11910590	11910591	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	11914844	11914845	1	A	core_nonrep	3	1	1
Rue3-1-31	1	11915871	11915872	1	C	core_nonrep	19	0.941176	1
Rue3-1-31	1	11919828	11919829	1	A	core_nonrep	8	1	1
Rue3-1-31	1	11925575	11925576	2	TT	core_nonrep	9	0.8	1
Rue3-1-31	1	11925576	11925577	1	C	core_nonrep	11	1	1
Rue3-1-31	1	11929236	11929237	1	G	core_nonrep	4	1	1
Rue3-1-31	1	11929594	11929595	1	A	core_nonrep	7	1	1
Rue3-1-31	1	11930912	11930913	1	C	core_nonrep	4	1	1
Rue3-1-31	1	11931601	11931602	1	C	core_nonrep	7	1	1
Rue3-1-31	1	11932721	11932722	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	1	11933052	11933053	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	11935026	11935027	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	11936663	11936664	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11936664	11936665	1	A	core_nonrep	4	1	1
Rue3-1-31	1	11941120	11941121	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	11947081	11947082	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	11947754	11947755	1	G	core_nonrep	17	1	1
Rue3-1-31	1	11947755	11947756	1	A	core_nonrep	15	1	1
Rue3-1-31	1	11948630	11948631	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	11950454	11950455	1	C	core_nonrep	8	1	1
Rue3-1-31	1	11950625	11950626	2	AA	core_nonrep	9	0.8	1
Rue3-1-31	1	11950979	11950980	1	T	core_nonrep	16	1	1
Rue3-1-31	1	11951643	11951644	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	11953510	11953511	2	AA	core_nonrep	12	1	1
Rue3-1-31	1	11957509	11957510	1	A	core_nonrep	17	1	1
Rue3-1-31	1	11957811	11957812	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11960838	11960839	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11968245	11968246	1	G	core_nonrep	17	1	1
Rue3-1-31	1	11971957	11971958	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	11972170	11972171	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	11972889	11972890	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	11974438	11974439	1	T	core_nonrep	5	1	1
Rue3-1-31	1	11980045	11980046	1	T	nonrep	3	0.75	1
Rue3-1-31	1	11980812	11980813	1	T	core_nonrep	4	1	1
Rue3-1-31	1	11990001	11990002	1	C	core_nonrep	3	1	1
Rue3-1-31	1	12001375	12001376	1	A	core_nonrep	3	1	1
Rue3-1-31	1	12003286	12003287	1	T	core_nonrep	7	1	1
Rue3-1-31	1	12005514	12005515	1	A	core_nonrep	3	1	1
Rue3-1-31	1	12005766	12005767	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	12008274	12008275	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12008621	12008622	3	CAT	core_nonrep	4	0.8	1
Rue3-1-31	1	12012298	12012299	1	T	core_nonrep	7	1	1
Rue3-1-31	1	12020248	12020249	1	G	core_nonrep	6	1	1
Rue3-1-31	1	12021253	12021254	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12021270	12021271	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12021495	12021496	1	G	nonrep	4	0.8	1
Rue3-1-31	1	12021716	12021717	1	A	core_nonrep	3	1	1
Rue3-1-31	1	12025782	12025783	1	T	core_nonrep	11	0.9	1
Rue3-1-31	1	12025844	12025845	2	AT	core_nonrep	12	1	1
Rue3-1-31	1	12026938	12026939	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	12029184	12029185	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12033551	12033552	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12033874	12033875	1	C	core_nonrep	3	1	1
Rue3-1-31	1	12035536	12035537	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	12040033	12040034	1	T	core_nonrep	8	1	1.08333
Rue3-1-31	1	12040334	12040335	1	C	core_nonrep	5	1	1
Rue3-1-31	1	12042292	12042293	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	12042345	12042346	1	T	nonrep	3	0.75	1
Rue3-1-31	1	12042484	12042485	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12043534	12043535	1	T	core_nonrep	10	0.875	1
Rue3-1-31	1	12050972	12050973	1	A	core_nonrep	9	1	1
Rue3-1-31	1	12054314	12054315	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	12071021	12071022	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	12071879	12071880	1	G	core_nonrep	16	0.882353	1
Rue3-1-31	1	12072253	12072254	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12076474	12076475	1	C	core_nonrep	8	0.75	1
Rue3-1-31	1	12076475	12076476	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	12077312	12077313	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12078766	12078767	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12078857	12078858	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	12079205	12079206	1	A	core_nonrep	8	1	1
Rue3-1-31	1	12079529	12079530	1	C	nonrep	3	1	1
Rue3-1-31	1	12081000	12081001	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12083276	12083277	1	A	core_nonrep	8	1	1
Rue3-1-31	1	12092026	12092027	1	A	core_nonrep	8	1	1
Rue3-1-31	1	12094531	12094532	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	12094532	12094533	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	12094544	12094545	1	C	core_nonrep	5	1	1
Rue3-1-31	1	12098165	12098166	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12098188	12098189	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	12124711	12124712	1	A	core_nonrep	12	0.777778	1
Rue3-1-31	1	12129705	12129706	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	12130945	12130946	1	T	core_nonrep	6	1	1
Rue3-1-31	1	12163257	12163258	1	A	nonrep	3	1	1
Rue3-1-31	1	12163574	12163575	2	AC	core_nonrep	4	0.8	1
Rue3-1-31	1	12164684	12164685	1	G	core_nonrep	8	1	1
Rue3-1-31	1	12168587	12168588	1	T	core_nonrep	6	1	1
Rue3-1-31	1	12182258	12182259	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	12183112	12183113	1	C	core_nonrep	4	1	1
Rue3-1-31	1	12184513	12184514	1	C	core_nonrep	5	1	1
Rue3-1-31	1	12184833	12184834	2	AA	core_nonrep	5	0.833333	1
Rue3-1-31	1	12186872	12186873	1	A	core_nonrep	9	1	1
Rue3-1-31	1	12188598	12188599	1	A	nonrep	3	0.75	1
Rue3-1-31	1	12193075	12193076	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12194082	12194083	1	A	nonrep	3	0.75	1
Rue3-1-31	1	12195164	12195165	1	T	core_nonrep	10	1	1
Rue3-1-31	1	12199492	12199493	1	T	core_nonrep	9	1	1
Rue3-1-31	1	12201911	12201912	1	T	core_nonrep	12	1	1
Rue3-1-31	1	12210630	12210631	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	12217162	12217163	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12226268	12226269	1	T	core_nonrep	6	1	1
Rue3-1-31	1	12229542	12229543	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	12237111	12237112	1	G	core_nonrep	6	1	1
Rue3-1-31	1	12237166	12237167	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	12238774	12238775	1	T	nonrep	3	1	1
Rue3-1-31	1	12239200	12239201	1	T	core_nonrep	5	1	1
Rue3-1-31	1	12242034	12242035	1	T	nonrep	4	0.8	1
Rue3-1-31	1	12246614	12246615	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12254169	12254170	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	1	12254203	12254204	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12257885	12257886	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	12270000	12270001	1	A	core_nonrep	3	1	1
Rue3-1-31	1	12279850	12279851	2	TG	core_nonrep	8	1	1
Rue3-1-31	1	12281737	12281738	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	12297457	12297458	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	12311175	12311176	1	C	core_nonrep	10	1	1
Rue3-1-31	1	12322458	12322459	2	TG	core_nonrep	16	0.833333	1
Rue3-1-31	1	12338478	12338479	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12355162	12355163	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12355214	12355215	1	T	core_nonrep	9	1	1
Rue3-1-31	1	12355470	12355471	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12359754	12359755	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12362260	12362261	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12362785	12362786	1	T	core_nonrep	3	1	1
Rue3-1-31	1	12366815	12366816	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	12370120	12370121	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	12370121	12370122	1	C	core_nonrep	9	1	1
Rue3-1-31	1	12386029	12386030	1	C	core_nonrep	4	1	1
Rue3-1-31	1	12390532	12390533	1	C	core_nonrep	23	0.909091	1
Rue3-1-31	1	12392244	12392245	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	12400205	12400206	1	C	core_nonrep	6	1	1
Rue3-1-31	1	12400720	12400721	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12400978	12400979	2	GA	core_nonrep	8	0.714286	1
Rue3-1-31	1	12401464	12401465	1	G	core_nonrep	8	1	1
Rue3-1-31	1	12401842	12401843	1	G	core_nonrep	8	1	1
Rue3-1-31	1	12416908	12416909	3	ATT	core_nonrep	9	0.75	1
Rue3-1-31	1	12433990	12433991	1	T	core_nonrep	9	1	1
Rue3-1-31	1	12435206	12435207	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	12435566	12435567	1	A	core_nonrep	3	1	1
Rue3-1-31	1	12435799	12435800	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12440121	12440122	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	12440141	12440142	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	12448662	12448663	1	T	core_nonrep	9	1	1
Rue3-1-31	1	12449041	12449042	1	T	core_nonrep	12	1	1
Rue3-1-31	1	12456267	12456268	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	12458480	12458481	1	T	core_nonrep	5	1	1
Rue3-1-31	1	12458617	12458618	1	G	core_nonrep	4	1	1
Rue3-1-31	1	12463026	12463027	1	G	core_nonrep	15	0.888889	1
Rue3-1-31	1	12464359	12464360	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12464466	12464467	1	A	core_nonrep	11	1	1
Rue3-1-31	1	12470530	12470531	1	A	core_nonrep	9	1	1
Rue3-1-31	1	12484908	12484909	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12500067	12500068	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12502706	12502707	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12517347	12517348	1	G	nonrep	3	1	1
Rue3-1-31	1	12518681	12518682	1	C	core_nonrep	3	1	1
Rue3-1-31	1	12526030	12526031	2	GG	core_nonrep	3	0.75	1
Rue3-1-31	1	12526031	12526032	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	12526432	12526433	2	AG	core_nonrep	5	0.8	1
Rue3-1-31	1	12542183	12542184	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	1	12543879	12543880	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12565650	12565651	1	T	core_nonrep	5	1	1
Rue3-1-31	1	12578029	12578030	1	T	core_nonrep	4	1	1.11111
Rue3-1-31	1	12578030	12578031	1	C	core_nonrep	4	0.8	1.09091
Rue3-1-31	1	12584344	12584345	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12594261	12594262	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12602602	12602603	1	T	core_nonrep	12	1	1
Rue3-1-31	1	12613244	12613245	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12623343	12623344	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	12631352	12631353	1	C	core_nonrep	5	1	1
Rue3-1-31	1	12636491	12636492	1	A	nonrep	4	0.8	1
Rue3-1-31	1	12638856	12638857	1	T	core_nonrep	6	1	1
Rue3-1-31	1	12639733	12639734	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12645368	12645369	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	12645370	12645371	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12654195	12654196	1	A	core_nonrep	11	1	1
Rue3-1-31	1	12654771	12654772	2	TT	core_nonrep	7	0.875	1
Rue3-1-31	1	12662393	12662394	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12662879	12662880	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	1	12664882	12664883	1	T	core_nonrep	9	1	1.22222
Rue3-1-31	1	12689377	12689378	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12689981	12689982	1	C	core_nonrep	10	0.875	1
Rue3-1-31	1	12694418	12694419	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	12702740	12702741	2	GT	core_nonrep	5	0.8	1
Rue3-1-31	1	12703738	12703739	1	T	core_nonrep	7	1	1
Rue3-1-31	1	12707885	12707886	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12729903	12729904	1	A	core_nonrep	4	1	1
Rue3-1-31	1	12735367	12735368	1	T	core_nonrep	4	1	1
Rue3-1-31	1	12736086	12736087	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	12736134	12736135	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	12736544	12736545	1	T	core_nonrep	12	1	1
Rue3-1-31	1	12738102	12738103	1	T	core_nonrep	10	1	1
Rue3-1-31	1	12741982	12741983	1	T	core_nonrep	11	0.909091	1.0625
Rue3-1-31	1	12749821	12749822	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12812017	12812018	1	T	core_nonrep	9	0.8	1
Rue3-1-31	1	12846618	12846619	1	G	core_nonrep	7	0.875	1
Rue3-1-31	1	12863597	12863598	1	T	core_nonrep	8	0.727273	1
Rue3-1-31	1	12954340	12954341	1	A	core_nonrep	6	1	1
Rue3-1-31	1	12956403	12956404	1	C	core_nonrep	16	1	1
Rue3-1-31	1	12958349	12958350	1	T	core_nonrep	5	1	1
Rue3-1-31	1	12959419	12959420	1	G	core_nonrep	3	1	1
Rue3-1-31	1	12960289	12960290	1	C	core_nonrep	11	1	1.47059
Rue3-1-31	1	12963752	12963753	1	A	core_nonrep	5	1	1
Rue3-1-31	1	12967675	12967676	1	T	core_nonrep	7	1	1
Rue3-1-31	1	12972117	12972118	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	12974812	12974813	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	12975109	12975110	1	A	core_nonrep	7	1	1
Rue3-1-31	1	12975223	12975224	1	A	core_nonrep	10	0.8	1.23077
Rue3-1-31	1	12982079	12982080	1	T	core_nonrep	6	1	1
Rue3-1-31	1	12988984	12988985	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	13031785	13031786	1	T	core_nonrep	13	1	1
Rue3-1-31	1	13032974	13032975	1	T	core_nonrep	14	1	1
Rue3-1-31	1	13033779	13033780	1	A	core_nonrep	5	1	1
Rue3-1-31	1	13034912	13034913	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13034913	13034914	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	1	13036360	13036361	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13049706	13049707	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	13067781	13067782	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13069345	13069346	1	A	core_nonrep	9	0.75	1
Rue3-1-31	1	13069811	13069812	1	T	nonrep	3	0.75	1
Rue3-1-31	1	13073105	13073106	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	13073106	13073107	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	13076056	13076057	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	13079540	13079541	1	A	core_nonrep	8	1	1
Rue3-1-31	1	13104416	13104417	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	1	13108113	13108114	1	G	core_nonrep	3	1	1
Rue3-1-31	1	13117585	13117586	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	13117811	13117812	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13118212	13118213	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13120802	13120803	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13125415	13125416	1	T	core_nonrep	10	1	1
Rue3-1-31	1	13129847	13129848	1	T	core_nonrep	6	1	1
Rue3-1-31	1	13145976	13145977	1	C	core_nonrep	7	0.75	1
Rue3-1-31	1	13145978	13145979	1	G	core_nonrep	9	0.875	1
Rue3-1-31	1	13148543	13148544	1	G	core_nonrep	7	1	1
Rue3-1-31	1	13151447	13151448	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13153108	13153109	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13154302	13154303	1	A	core_nonrep	4	1	1
Rue3-1-31	1	13154917	13154918	1	G	core_nonrep	6	1	1
Rue3-1-31	1	13155097	13155098	1	C	core_nonrep	8	1	1
Rue3-1-31	1	13156416	13156417	1	A	core_nonrep	4	1	1
Rue3-1-31	1	13156455	13156456	1	A	core_nonrep	7	1	1
Rue3-1-31	1	13157069	13157070	1	C	core_nonrep	15	1	1
Rue3-1-31	1	13160358	13160359	1	C	nonrep	3	1	1
Rue3-1-31	1	13161760	13161761	1	G	core_nonrep	3	1	1.16667
Rue3-1-31	1	13164616	13164617	1	A	core_nonrep	7	1	1
Rue3-1-31	1	13192091	13192092	1	C	core_nonrep	4	1	1
Rue3-1-31	1	13198597	13198598	1	A	core	3	1	1.25
Rue3-1-31	1	13200394	13200395	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13200946	13200947	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13203630	13203631	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	13204087	13204088	1	G	nonrep	3	1	1
Rue3-1-31	1	13207214	13207215	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13211916	13211917	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13218815	13218816	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13219816	13219817	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13220501	13220502	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	13221621	13221622	1	T	nonrep	3	0.75	1
Rue3-1-31	1	13243829	13243830	1	A	core_nonrep	10	0.875	1
Rue3-1-31	1	13246963	13246964	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	13257119	13257120	1	A	core_nonrep	7	1	1
Rue3-1-31	1	13259214	13259215	1	A	core_nonrep	5	1	1
Rue3-1-31	1	13260263	13260264	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	13262392	13262393	1	T	nonrep	3	1	1
Rue3-1-31	1	13273597	13273598	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	13276720	13276721	3	AAA	core_nonrep	12	0.846154	1.10526
Rue3-1-31	1	13283286	13283287	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13292212	13292213	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13305936	13305937	1	G	core_nonrep	7	0.714286	1
Rue3-1-31	1	13314213	13314214	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13321088	13321089	1	A	core_nonrep	9	1	1
Rue3-1-31	1	13324719	13324720	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	13345831	13345832	1	T	core_nonrep	8	1	1
Rue3-1-31	1	13352282	13352283	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13353279	13353280	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13355489	13355490	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	13355492	13355493	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	13367432	13367433	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	13369723	13369724	2	TA	core_nonrep	8	1	1
Rue3-1-31	1	13370512	13370513	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13370515	13370516	1	A	core_nonrep	4	1	1
Rue3-1-31	1	13371689	13371690	2	AA	core_nonrep	7	1	1
Rue3-1-31	1	13385546	13385547	1	T	core_nonrep	13	1	1
Rue3-1-31	1	13390903	13390904	2	GA	core_nonrep	4	1	1
Rue3-1-31	1	13391125	13391126	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	13397152	13397153	1	C	core_nonrep	19	0.777778	1
Rue3-1-31	1	13401490	13401491	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13412281	13412282	1	T	core_nonrep	10	1	1
Rue3-1-31	1	13414067	13414068	1	C	core_nonrep	17	0.941176	1
Rue3-1-31	1	13416185	13416186	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	1	13416495	13416496	1	T	core_nonrep	7	1	1
Rue3-1-31	1	13428247	13428248	1	A	core_nonrep	11	1	1
Rue3-1-31	1	13433319	13433320	1	T	core_nonrep	6	1	1
Rue3-1-31	1	13436373	13436374	1	A	core_nonrep	5	1	1
Rue3-1-31	1	13437209	13437210	1	C	core_nonrep	10	1	1
Rue3-1-31	1	13438910	13438911	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	1	13455287	13455288	1	A	core_nonrep	4	1	1
Rue3-1-31	1	13455482	13455483	1	T	nonrep	4	0.8	1
Rue3-1-31	1	13457370	13457371	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	1	13457751	13457752	1	C	core_nonrep	4	1	1
Rue3-1-31	1	13460824	13460825	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13461489	13461490	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13462554	13462555	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	13465284	13465285	1	A	nonrep	5	1	1
Rue3-1-31	1	13465611	13465612	1	T	core_nonrep	10	1	1
Rue3-1-31	1	13465668	13465669	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13475413	13475414	1	C	core_nonrep	3	1	1
Rue3-1-31	1	13478894	13478895	1	A	nonrep	3	0.75	1
Rue3-1-31	1	13494169	13494170	1	T	core_nonrep	8	1	1
Rue3-1-31	1	13494319	13494320	1	G	core_nonrep	15	1	1
Rue3-1-31	1	13496329	13496330	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	13497844	13497845	1	T	core_nonrep	7	1	1
Rue3-1-31	1	13498531	13498532	1	G	core_nonrep	4	1	1
Rue3-1-31	1	13501049	13501050	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	13501333	13501334	2	TG	core_nonrep	7	0.714286	1
Rue3-1-31	1	13501857	13501858	3	AAG	core_nonrep	17	0.941176	1
Rue3-1-31	1	13503999	13504000	1	T	core_nonrep	18	0.941176	1
Rue3-1-31	1	13504719	13504720	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	13522462	13522463	1	T	nonrep	9	0.818182	1
Rue3-1-31	1	13531172	13531173	2	AA	core_nonrep	6	0.75	1.11111
Rue3-1-31	1	13532856	13532857	1	A	core_nonrep	7	1	1
Rue3-1-31	1	13547699	13547700	1	T	core_nonrep	17	0.789474	1
Rue3-1-31	1	13549392	13549393	1	C	core_nonrep	10	0.769231	1
Rue3-1-31	1	13560175	13560176	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	1	13564908	13564909	1	C	core_nonrep	14	1	1
Rue3-1-31	1	13568068	13568069	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	13568134	13568135	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	13570097	13570098	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	13583392	13583393	1	C	core_nonrep	4	1	1
Rue3-1-31	1	13592790	13592791	1	G	core_nonrep	5	1	1
Rue3-1-31	1	13593931	13593932	1	A	core_nonrep	4	1	1
Rue3-1-31	1	13611765	13611766	2	GT	core_nonrep	6	0.833333	1
Rue3-1-31	1	13612912	13612913	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13615087	13615088	1	T	core_nonrep	8	1	1
Rue3-1-31	1	13615088	13615089	1	C	core_nonrep	8	1	1
Rue3-1-31	1	13616506	13616507	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13617123	13617124	1	G	core_nonrep	11	1	1
Rue3-1-31	1	13617680	13617681	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	13617684	13617685	1	C	core_nonrep	5	1	1
Rue3-1-31	1	13618352	13618353	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13620656	13620657	1	C	core_nonrep	6	1	1
Rue3-1-31	1	13629295	13629296	1	T	core_nonrep	10	1	1.08333
Rue3-1-31	1	13639646	13639647	1	C	core_nonrep	4	1	1
Rue3-1-31	1	13640271	13640272	1	A	core_nonrep	3	1	1
Rue3-1-31	1	13640297	13640298	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	13642521	13642522	1	C	core_nonrep	10	0.875	1
Rue3-1-31	1	13672690	13672691	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	13700851	13700852	1	A	core_nonrep	8	1	1
Rue3-1-31	1	13702283	13702284	1	C	core_nonrep	12	0.916667	1
Rue3-1-31	1	13711111	13711112	1	C	core_nonrep	7	1	1
Rue3-1-31	1	13721691	13721692	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	13732783	13732784	1	T	core_nonrep	6	1	1
Rue3-1-31	1	13732855	13732856	1	T	core_nonrep	6	1	1
Rue3-1-31	1	13733275	13733276	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13745835	13745836	1	T	core_nonrep	22	1	1
Rue3-1-31	1	13749755	13749756	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	13749806	13749807	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13754207	13754208	1	A	core_nonrep	9	1	1
Rue3-1-31	1	13766441	13766442	2	TC	core_nonrep	9	0.888889	1
Rue3-1-31	1	13805808	13805809	1	C	core_nonrep	9	1	1
Rue3-1-31	1	13812486	13812487	1	G	core_nonrep	4	1	1
Rue3-1-31	1	13813479	13813480	1	A	nonrep	3	0.75	1
Rue3-1-31	1	13816890	13816891	1	C	core_nonrep	7	1	1
Rue3-1-31	1	13816996	13816997	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	1	13817632	13817633	1	T	core_nonrep	12	0.692308	1
Rue3-1-31	1	13825168	13825169	1	A	core_nonrep	12	1	1.42857
Rue3-1-31	1	13829265	13829266	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	13837236	13837237	1	A	core_nonrep	9	1	1
Rue3-1-31	1	13845278	13845279	1	T	nonrep	4	0.8	1
Rue3-1-31	1	13855059	13855060	1	A	nonrep	3	1	1
Rue3-1-31	1	13857752	13857753	1	C	core_nonrep	6	1	1
Rue3-1-31	1	13866976	13866977	1	C	core_nonrep	4	1	1
Rue3-1-31	1	13867056	13867057	1	G	core_nonrep	4	1	1
Rue3-1-31	1	13870339	13870340	1	A	core_nonrep	8	1	1
Rue3-1-31	1	13875551	13875552	1	C	core_nonrep	6	0.8	1
Rue3-1-31	1	13877908	13877909	1	T	core_nonrep	3	1	1
Rue3-1-31	1	13878120	13878121	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	13881626	13881627	1	A	nonrep	3	0.75	1
Rue3-1-31	1	13896762	13896763	1	G	core_nonrep	3	1	1
Rue3-1-31	1	13898817	13898818	1	T	core_nonrep	7	1	1
Rue3-1-31	1	13898825	13898826	1	A	core_nonrep	7	1	1
Rue3-1-31	1	13898828	13898829	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	13909205	13909206	1	C	core_nonrep	11	1	1
Rue3-1-31	1	13926435	13926436	2	GC	core_nonrep	5	1	1
Rue3-1-31	1	13975889	13975890	1	A	core_nonrep	6	1	1
Rue3-1-31	1	13988470	13988471	1	A	core_nonrep	11	0.833333	1
Rue3-1-31	1	13989644	13989645	1	T	core_nonrep	4	1	1
Rue3-1-31	1	13993041	13993042	1	T	core_nonrep	5	1	1
Rue3-1-31	1	13999905	13999906	1	T	core_nonrep	6	1	1
Rue3-1-31	1	14002845	14002846	1	C	nonrep	3	0.75	1
Rue3-1-31	1	14024539	14024540	1	G	core_nonrep	19	0.933333	1
Rue3-1-31	1	14051542	14051543	1	A	core_nonrep	9	1	1
Rue3-1-31	1	14058532	14058533	1	A	core_nonrep	4	1	1
Rue3-1-31	1	14061396	14061397	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	14061397	14061398	1	A	nonrep	5	0.833333	1
Rue3-1-31	1	14084506	14084507	1	A	core_nonrep	11	0.733333	1
Rue3-1-31	1	14111530	14111531	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	14116391	14116392	1	G	core_nonrep	5	1	1
Rue3-1-31	1	14126510	14126511	1	A	core_nonrep	6	1	1
Rue3-1-31	1	14135212	14135213	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	1	14143202	14143203	1	T	core_nonrep	5	1	1
Rue3-1-31	1	14144597	14144598	1	T	core_nonrep	7	1	1
Rue3-1-31	1	14144599	14144600	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	14149563	14149564	1	C	core_nonrep	6	1	1
Rue3-1-31	1	14158121	14158122	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	1	14165342	14165343	1	T	core_nonrep	6	1	1
Rue3-1-31	1	14169129	14169130	1	T	core_nonrep	9	1	1
Rue3-1-31	1	14169329	14169330	2	GA	core_nonrep	3	1	1
Rue3-1-31	1	14170869	14170870	1	T	core_nonrep	6	1	1
Rue3-1-31	1	14171446	14171447	1	T	core_nonrep	7	1	1
Rue3-1-31	1	14171747	14171748	1	A	core_nonrep	4	1	1
Rue3-1-31	1	14173523	14173524	1	T	core_nonrep	7	1	1
Rue3-1-31	1	14177694	14177695	1	C	core_nonrep	7	1	1
Rue3-1-31	1	14179079	14179080	1	G	core_nonrep	11	1	1
Rue3-1-31	1	14190058	14190059	1	C	core_nonrep	3	1	1
Rue3-1-31	1	14201157	14201158	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	14201645	14201646	1	C	core_nonrep	13	1	1
Rue3-1-31	1	14245022	14245023	1	T	core_nonrep	12	0.9	1.55556
Rue3-1-31	1	14255950	14255951	1	G	core_nonrep	16	1	1
Rue3-1-31	1	14282625	14282626	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	14308939	14308940	1	T	core_nonrep	4	1	1
Rue3-1-31	1	14309039	14309040	1	T	nonrep	3	0.75	1
Rue3-1-31	1	14333376	14333377	1	T	core_nonrep	5	1	1
Rue3-1-31	1	14333814	14333815	1	G	core_nonrep	7	1	1
Rue3-1-31	1	14494734	14494735	1	T	core_nonrep	8	1	1.8
Rue3-1-31	1	14547326	14547327	1	A	nonrep	9	0.9	1
Rue3-1-31	1	14691023	14691024	1	G	core_nonrep	11	0.888889	1.35714
Rue3-1-31	1	15007077	15007078	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	1	15059261	15059262	1	T	core_nonrep	5	1	1
Rue3-1-31	1	15060849	15060850	1	A	core_nonrep	3	1	1
Rue3-1-31	1	15062120	15062121	1	A	core_nonrep	8	1	1.22222
Rue3-1-31	1	15181687	15181688	1	T	core_nonrep	31	0.888889	1.42593
Rue3-1-31	1	15427682	15427683	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	1	15445054	15445055	1	T	nonrep	3	0.75	1
Rue3-1-31	1	15446889	15446890	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	1	15500903	15500904	2	GG	core_nonrep	8	1	1.73333
Rue3-1-31	1	15511450	15511451	1	A	core_nonrep	7	0.833333	1.23077
Rue3-1-31	1	15529896	15529897	1	A	core_nonrep	17	0.933333	1
Rue3-1-31	1	15533251	15533252	1	C	core_nonrep	9	1	1
Rue3-1-31	1	15584230	15584231	1	C	core_nonrep	16	1	1
Rue3-1-31	1	15604371	15604372	1	A	core_nonrep	3	1	1
Rue3-1-31	1	15605966	15605967	1	A	core_nonrep	3	1	1
Rue3-1-31	1	15607619	15607620	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	15607865	15607866	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	15611392	15611393	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	15635171	15635172	1	A	core_nonrep	3	1	1
Rue3-1-31	1	15643116	15643117	1	A	core_nonrep	13	0.888889	1
Rue3-1-31	1	15644604	15644605	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	15647562	15647563	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	15654120	15654121	1	T	core_nonrep	6	1	1.4
Rue3-1-31	1	15654485	15654486	1	G	core_nonrep	6	0.75	1.18182
Rue3-1-31	1	15706201	15706202	1	T	core_nonrep	5	1	1
Rue3-1-31	1	15733050	15733051	1	T	core_nonrep	4	1	1
Rue3-1-31	1	15819013	15819014	1	C	core_nonrep	5	1	1
Rue3-1-31	1	15821624	15821625	1	T	core_nonrep	3	1	1.2
Rue3-1-31	1	15882736	15882737	3	CTT	core_nonrep	7	1	1
Rue3-1-31	1	15883132	15883133	1	G	core_nonrep	9	1	1
Rue3-1-31	1	15884375	15884376	1	T	core_nonrep	5	1	1
Rue3-1-31	1	15887165	15887166	1	C	core_nonrep	11	1	1.23077
Rue3-1-31	1	15896742	15896743	1	C	core_nonrep	18	0.8	1
Rue3-1-31	1	15900531	15900532	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	15906225	15906226	1	A	core_nonrep	3	1	1
Rue3-1-31	1	15910202	15910203	1	G	nonrep	3	1	1
Rue3-1-31	1	15911373	15911374	1	T	core_nonrep	7	1	1
Rue3-1-31	1	15920036	15920037	1	T	core_nonrep	8	1	1
Rue3-1-31	1	15921477	15921478	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	15933881	15933882	1	G	core_nonrep	16	0.923077	1
Rue3-1-31	1	15948437	15948438	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	15949236	15949237	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	15950562	15950563	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	15950721	15950722	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	15951502	15951503	1	T	nonrep	3	0.75	1
Rue3-1-31	1	15952925	15952926	1	T	core_nonrep	6	1	1
Rue3-1-31	1	15963360	15963361	1	A	core_nonrep	4	1	1
Rue3-1-31	1	15972404	15972405	1	A	core_nonrep	6	1	1
Rue3-1-31	1	15985817	15985818	1	A	core_nonrep	4	1	1
Rue3-1-31	1	15985987	15985988	1	T	core_nonrep	5	1	1
Rue3-1-31	1	15989646	15989647	1	G	core_nonrep	8	0.8	1
Rue3-1-31	1	15991640	15991641	1	T	core_nonrep	5	1	1.14286
Rue3-1-31	1	15997748	15997749	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16012396	16012397	1	T	nonrep	3	1	1
Rue3-1-31	1	16037425	16037426	1	T	core	3	1	1.33333
Rue3-1-31	1	16062780	16062781	1	G	core_nonrep	6	1	1.28571
Rue3-1-31	1	16076490	16076491	1	T	core_nonrep	16	0.789474	1
Rue3-1-31	1	16076770	16076771	1	T	nonrep	3	1	1
Rue3-1-31	1	16115033	16115034	1	A	core_nonrep	8	1	1
Rue3-1-31	1	16115034	16115035	1	G	core_nonrep	8	1	1
Rue3-1-31	1	16134958	16134959	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	16138226	16138227	2	GA	nonrep	8	0.727273	1
Rue3-1-31	1	16146484	16146485	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	16155888	16155889	1	C	core_nonrep	4	1	1
Rue3-1-31	1	16157767	16157768	1	A	core_nonrep	5	1	1
Rue3-1-31	1	16158119	16158120	1	A	core_nonrep	10	1	1
Rue3-1-31	1	16165691	16165692	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	16174941	16174942	1	A	core_nonrep	10	1	1
Rue3-1-31	1	16175620	16175621	1	T	core_nonrep	3	1	1
Rue3-1-31	1	16179989	16179990	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16179990	16179991	1	C	core_nonrep	5	1	1
Rue3-1-31	1	16186558	16186559	1	A	core_nonrep	7	1	1
Rue3-1-31	1	16203904	16203905	1	T	core_nonrep	6	1	1
Rue3-1-31	1	16209153	16209154	1	T	core_nonrep	13	1	1.0625
Rue3-1-31	1	16215045	16215046	1	A	core_nonrep	6	1	1.3125
Rue3-1-31	1	16230682	16230683	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	16234281	16234282	1	C	core_nonrep	14	1	1
Rue3-1-31	1	16234848	16234849	1	A	core_nonrep	4	1	1
Rue3-1-31	1	16243967	16243968	1	T	core_nonrep	6	1	1
Rue3-1-31	1	16247018	16247019	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	16247494	16247495	1	G	core_nonrep	3	1	1
Rue3-1-31	1	16248313	16248314	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16249974	16249975	1	T	core_nonrep	8	1	1.2
Rue3-1-31	1	16250494	16250495	1	C	core_nonrep	3	1	1
Rue3-1-31	1	16253942	16253943	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16260064	16260065	1	C	core_nonrep	8	0.75	1
Rue3-1-31	1	16260331	16260332	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16260629	16260630	1	A	core_nonrep	6	1	1
Rue3-1-31	1	16263289	16263290	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	16265541	16265542	1	G	core_nonrep	4	1	1
Rue3-1-31	1	16272912	16272913	1	T	core_nonrep	11	1	1
Rue3-1-31	1	16276468	16276469	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	16282135	16282136	1	C	core_nonrep	18	0.857143	1
Rue3-1-31	1	16309130	16309131	1	G	core_nonrep	8	0.875	1.1
Rue3-1-31	1	16314845	16314846	1	G	core_nonrep	7	1	1
Rue3-1-31	1	16315174	16315175	2	GG	core_nonrep	4	0.8	1
Rue3-1-31	1	16343065	16343066	1	G	core_nonrep	4	1	1
Rue3-1-31	1	16343066	16343067	1	A	core_nonrep	4	1	1
Rue3-1-31	1	16345652	16345653	1	C	core_nonrep	4	1	1
Rue3-1-31	1	16345653	16345654	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16351002	16351003	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16387663	16387664	1	C	core_nonrep	13	0.916667	1.08696
Rue3-1-31	1	16400659	16400660	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	16402300	16402301	1	A	core_nonrep	9	1	1
Rue3-1-31	1	16403896	16403897	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	16403899	16403900	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	16409742	16409743	1	T	core_nonrep	7	1	1.125
Rue3-1-31	1	16425637	16425638	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16426111	16426112	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16436949	16436950	3	CTA	core_nonrep	6	0.833333	1
Rue3-1-31	1	16440689	16440690	1	C	core_nonrep	14	1	1
Rue3-1-31	1	16440970	16440971	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16441225	16441226	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	16444374	16444375	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	16445315	16445316	1	T	core_nonrep	3	1	1
Rue3-1-31	1	16445454	16445455	1	A	core_nonrep	4	1	1
Rue3-1-31	1	16449435	16449436	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	1	16451737	16451738	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	16455179	16455180	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	16455180	16455181	1	C	core_nonrep	4	1	1
Rue3-1-31	1	16456297	16456298	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	16457068	16457069	1	T	nonrep	3	1	1
Rue3-1-31	1	16465753	16465754	1	A	core_nonrep	8	1	1
Rue3-1-31	1	16467341	16467342	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16468258	16468259	1	C	core_nonrep	4	1	1
Rue3-1-31	1	16468259	16468260	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	1	16476813	16476814	1	C	core_nonrep	6	1	1
Rue3-1-31	1	16506242	16506243	1	A	nonrep	3	1	1
Rue3-1-31	1	16507862	16507863	2	AT	core_nonrep	9	1	1.07692
Rue3-1-31	1	16516182	16516183	1	T	core_nonrep	3	1	1.25
Rue3-1-31	1	16539307	16539308	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	16563503	16563504	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16564609	16564610	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16568161	16568162	1	A	core_nonrep	3	1	1
Rue3-1-31	1	16568224	16568225	1	C	core_nonrep	6	1	1
Rue3-1-31	1	16568983	16568984	1	G	core_nonrep	3	1	1
Rue3-1-31	1	16569652	16569653	1	T	core_nonrep	7	1	1
Rue3-1-31	1	16580429	16580430	1	A	core_nonrep	9	1	1
Rue3-1-31	1	16582717	16582718	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	16586575	16586576	1	T	core_nonrep	9	0.888889	1.78571
Rue3-1-31	1	16600443	16600444	1	A	core_nonrep	4	0.75	1.28571
Rue3-1-31	1	16600654	16600655	1	A	core_nonrep	3	1	1
Rue3-1-31	1	16602441	16602442	1	A	core_nonrep	4	1	1
Rue3-1-31	1	16608275	16608276	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	16609204	16609205	2	GA	core_nonrep	11	0.9	1
Rue3-1-31	1	16615666	16615667	1	G	core_nonrep	3	1	1
Rue3-1-31	1	16616416	16616417	1	T	core_nonrep	4	0.8	1.77778
Rue3-1-31	1	16624543	16624544	1	T	core_nonrep	10	1	1
Rue3-1-31	1	16645931	16645932	1	T	core_nonrep	18	0.823529	1
Rue3-1-31	1	16648932	16648933	1	T	core_nonrep	3	1	1
Rue3-1-31	1	16650458	16650459	1	C	core_nonrep	11	1	1
Rue3-1-31	1	16656431	16656432	1	A	core_nonrep	3	1	1
Rue3-1-31	1	16663467	16663468	1	A	core_nonrep	14	0.857143	1
Rue3-1-31	1	16678121	16678122	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	16689596	16689597	1	T	core_nonrep	7	1	1
Rue3-1-31	1	16707065	16707066	1	A	core_nonrep	5	1	1
Rue3-1-31	1	16710766	16710767	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	1	16710767	16710768	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	1	16715637	16715638	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16716744	16716745	1	A	core_nonrep	5	1	1
Rue3-1-31	1	16721174	16721175	2	GT	core_nonrep	7	0.857143	1
Rue3-1-31	1	16730517	16730518	1	A	core_nonrep	10	0.8	1
Rue3-1-31	1	16733980	16733981	1	G	core_nonrep	4	1	1
Rue3-1-31	1	16741267	16741268	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	1	16744686	16744687	1	G	core_nonrep	7	1	1
Rue3-1-31	1	16750845	16750846	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	1	16756938	16756939	1	A	core_nonrep	13	1	1
Rue3-1-31	1	16760134	16760135	1	T	core_nonrep	11	1	1
Rue3-1-31	1	16761448	16761449	1	C	core_nonrep	9	1	1
Rue3-1-31	1	16764191	16764192	1	G	core_nonrep	10	1	1
Rue3-1-31	1	16769217	16769218	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	1	16770119	16770120	1	A	nonrep	3	1	1
Rue3-1-31	1	16770925	16770926	1	T	core_nonrep	4	1	1
Rue3-1-31	1	16772734	16772735	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	16774426	16774427	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	16775591	16775592	1	A	core_nonrep	3	1	1
Rue3-1-31	1	16779345	16779346	1	T	nonrep	6	0.857143	1
Rue3-1-31	1	16794461	16794462	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	16796067	16796068	1	T	core_nonrep	8	1	1
Rue3-1-31	1	16802189	16802190	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	16803509	16803510	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	16806237	16806238	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	16806566	16806567	3	AAA	core_nonrep	4	1	1
Rue3-1-31	1	16811899	16811900	1	T	core_nonrep	3	1	1
Rue3-1-31	1	16829162	16829163	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	16830042	16830043	1	A	core_nonrep	6	0.857143	1.11111
Rue3-1-31	1	16830602	16830603	1	G	core_nonrep	3	1	1
Rue3-1-31	1	16839141	16839142	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	16839648	16839649	1	C	core_nonrep	8	1	1
Rue3-1-31	1	16840002	16840003	1	T	core_nonrep	9	1	1
Rue3-1-31	1	16847530	16847531	1	C	core_nonrep	11	1	1
Rue3-1-31	1	16852947	16852948	1	C	core_nonrep	7	1	1
Rue3-1-31	1	16853694	16853695	1	G	core_nonrep	15	0.9	1
Rue3-1-31	1	16855732	16855733	1	A	core_nonrep	7	1	1
Rue3-1-31	1	16861088	16861089	1	G	core_nonrep	3	1	1.8
Rue3-1-31	1	16862750	16862751	1	C	nonrep	3	1	1
Rue3-1-31	1	16876219	16876220	1	A	core_nonrep	3	1	1
Rue3-1-31	1	16877948	16877949	1	A	core_nonrep	7	1	1
Rue3-1-31	1	16878707	16878708	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	16878708	16878709	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	1	16884034	16884035	1	C	core_nonrep	11	1	1
Rue3-1-31	1	16898098	16898099	1	A	core_nonrep	8	1	1
Rue3-1-31	1	16898979	16898980	1	A	core_nonrep	5	1	1
Rue3-1-31	1	16916115	16916116	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	16923246	16923247	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16931601	16931602	1	T	core_nonrep	13	1	1
Rue3-1-31	1	16938813	16938814	1	A	core_nonrep	4	1	1
Rue3-1-31	1	16940021	16940022	1	A	core_nonrep	11	1	1
Rue3-1-31	1	16940553	16940554	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	16942049	16942050	1	C	core_nonrep	4	1	1
Rue3-1-31	1	16954759	16954760	1	G	core_nonrep	5	1	1.28571
Rue3-1-31	1	16976986	16976987	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16978423	16978424	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	16981781	16981782	1	T	core_nonrep	5	1	1
Rue3-1-31	1	16982902	16982903	1	A	core_nonrep	8	1	1
Rue3-1-31	1	16984730	16984731	1	A	core_nonrep	6	1	1
Rue3-1-31	1	16985417	16985418	1	C	core_nonrep	5	1	1
Rue3-1-31	1	16993529	16993530	3	ATG	core_nonrep	5	0.833333	1.53846
Rue3-1-31	1	16994968	16994969	1	G	core_nonrep	16	1	1
Rue3-1-31	1	16995692	16995693	1	A	core_nonrep	10	1	1
Rue3-1-31	1	16995725	16995726	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	16996045	16996046	1	A	core_nonrep	21	0.9	1
Rue3-1-31	1	16996497	16996498	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	16998846	16998847	1	G	core_nonrep	5	1	1
Rue3-1-31	1	17007066	17007067	1	G	core_nonrep	4	1	1
Rue3-1-31	1	17009586	17009587	1	G	nonrep	5	1	1
Rue3-1-31	1	17010330	17010331	1	A	core_nonrep	3	1	1
Rue3-1-31	1	17013373	17013374	1	A	core_nonrep	8	1	1
Rue3-1-31	1	17014599	17014600	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	17015662	17015663	1	A	core_nonrep	3	1	1
Rue3-1-31	1	17015663	17015664	1	C	nonrep	3	1	1
Rue3-1-31	1	17026776	17026777	1	C	core_nonrep	25	1	1
Rue3-1-31	1	17031975	17031976	1	A	core_nonrep	12	0.9	1
Rue3-1-31	1	17032356	17032357	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	17033223	17033224	1	C	core_nonrep	7	0.7	1
Rue3-1-31	1	17053367	17053368	1	A	core_nonrep	19	0.85	1
Rue3-1-31	1	17066086	17066087	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	1	17078418	17078419	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	1	17078841	17078842	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17100513	17100514	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17105473	17105474	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	17108122	17108123	1	A	core_nonrep	7	1	1
Rue3-1-31	1	17125795	17125796	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17125796	17125797	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17126728	17126729	1	A	core_nonrep	8	1	1
Rue3-1-31	1	17126742	17126743	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17127720	17127721	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17128858	17128859	1	G	core_nonrep	4	1	1
Rue3-1-31	1	17130194	17130195	1	C	core_nonrep	3	1	1
Rue3-1-31	1	17135692	17135693	1	T	core_nonrep	16	1	1
Rue3-1-31	1	17136058	17136059	1	T	core_nonrep	13	1	1
Rue3-1-31	1	17138648	17138649	1	T	core_nonrep	4	1	1.4
Rue3-1-31	1	17143544	17143545	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17144379	17144380	1	A	core_nonrep	9	0.7	1.13333
Rue3-1-31	1	17170970	17170971	1	C	core_nonrep	3	1	1
Rue3-1-31	1	17176361	17176362	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	1	17181137	17181138	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17184821	17184822	1	A	core_nonrep	11	0.785714	1
Rue3-1-31	1	17188975	17188976	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17188999	17189000	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17196502	17196503	1	G	core_nonrep	3	1	1
Rue3-1-31	1	17210421	17210422	1	A	core_nonrep	7	0.833333	1.11111
Rue3-1-31	1	17210470	17210471	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	17211291	17211292	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17214334	17214335	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17215602	17215603	1	T	nonrep	5	1	1
Rue3-1-31	1	17217391	17217392	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17222749	17222750	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17225006	17225007	1	G	core_nonrep	8	1	1
Rue3-1-31	1	17225565	17225566	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	17246432	17246433	1	C	core_nonrep	6	1	1
Rue3-1-31	1	17247154	17247155	1	C	core_nonrep	3	1	1
Rue3-1-31	1	17253205	17253206	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	1	17254863	17254864	1	G	core_nonrep	5	1	1
Rue3-1-31	1	17256080	17256081	1	A	core_nonrep	12	0.9	1
Rue3-1-31	1	17290933	17290934	1	T	nonrep	7	0.7	1
Rue3-1-31	1	17292627	17292628	1	G	core_nonrep	4	1	1
Rue3-1-31	1	17295286	17295287	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	17295933	17295934	2	AT	core_nonrep	6	0.833333	1
Rue3-1-31	1	17296021	17296022	1	A	core_nonrep	10	0.875	1
Rue3-1-31	1	17296343	17296344	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17298725	17298726	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17298746	17298747	1	G	core_nonrep	5	1	1
Rue3-1-31	1	17299687	17299688	2	TG	core_nonrep	9	1	1
Rue3-1-31	1	17309612	17309613	1	T	core_nonrep	11	1	1
Rue3-1-31	1	17311143	17311144	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17312966	17312967	1	T	core_nonrep	7	1	1
Rue3-1-31	1	17314432	17314433	1	C	core_nonrep	4	1	1
Rue3-1-31	1	17322790	17322791	1	T	core_nonrep	4	1	1
Rue3-1-31	1	17324469	17324470	1	T	core_nonrep	10	1	1
Rue3-1-31	1	17325527	17325528	1	A	core_nonrep	7	1	1
Rue3-1-31	1	17335644	17335645	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17337975	17337976	1	G	core_nonrep	3	1	1
Rue3-1-31	1	17347236	17347237	1	T	core_nonrep	4	1	1
Rue3-1-31	1	17352696	17352697	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	17353069	17353070	1	G	core_nonrep	5	1	1
Rue3-1-31	1	17356245	17356246	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	17356247	17356248	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	17369674	17369675	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17372411	17372412	1	C	core_nonrep	3	1	1
Rue3-1-31	1	17373535	17373536	1	T	core_nonrep	7	1	1
Rue3-1-31	1	17373536	17373537	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17374312	17374313	1	C	core_nonrep	3	1	1
Rue3-1-31	1	17375577	17375578	2	TG	core_nonrep	6	0.8	1
Rue3-1-31	1	17377535	17377536	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17377789	17377790	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17378522	17378523	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	17378535	17378536	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	17378650	17378651	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17383061	17383062	1	T	core_nonrep	13	1	1
Rue3-1-31	1	17386622	17386623	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17392352	17392353	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	1	17398275	17398276	1	G	core_nonrep	6	1	1
Rue3-1-31	1	17405083	17405084	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	17405308	17405309	2	AT	core_nonrep	6	0.714286	1
Rue3-1-31	1	17409261	17409262	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17409262	17409263	1	G	core_nonrep	9	1	1
Rue3-1-31	1	17409549	17409550	1	A	core_nonrep	12	1	1
Rue3-1-31	1	17413114	17413115	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	17413616	17413617	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	17416509	17416510	1	T	core_nonrep	9	1	1
Rue3-1-31	1	17416702	17416703	1	A	nonrep	3	0.75	1
Rue3-1-31	1	17418034	17418035	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	17419031	17419032	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	17419250	17419251	1	C	nonrep	3	1	1
Rue3-1-31	1	17438908	17438909	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17439508	17439509	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17441798	17441799	1	G	nonrep	3	0.75	1
Rue3-1-31	1	17449930	17449931	1	T	core_nonrep	11	1	1
Rue3-1-31	1	17450472	17450473	1	T	core_nonrep	4	1	1
Rue3-1-31	1	17453013	17453014	1	G	core_nonrep	8	1	1
Rue3-1-31	1	17455864	17455865	1	C	core_nonrep	15	1	1
Rue3-1-31	1	17456784	17456785	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17467580	17467581	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	17467762	17467763	1	G	core_nonrep	8	1	1
Rue3-1-31	1	17482180	17482181	1	T	core_nonrep	8	1	1
Rue3-1-31	1	17483220	17483221	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	17484004	17484005	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	17484371	17484372	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	17485243	17485244	2	AT	core_nonrep	17	1	1
Rue3-1-31	1	17492647	17492648	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	17498478	17498479	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17501164	17501165	1	A	core_nonrep	8	1	1
Rue3-1-31	1	17506177	17506178	3	TAA	core_nonrep	5	1	1
Rue3-1-31	1	17515543	17515544	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	17522930	17522931	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	17535506	17535507	1	T	core_nonrep	8	1	1
Rue3-1-31	1	17537314	17537315	2	TT	core_nonrep	8	0.857143	1
Rue3-1-31	1	17552509	17552510	1	A	core_nonrep	3	1	1
Rue3-1-31	1	17559615	17559616	1	T	core_nonrep	10	1	1
Rue3-1-31	1	17560652	17560653	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17568961	17568962	2	TA	core_nonrep	8	1	1
Rue3-1-31	1	17569320	17569321	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17570436	17570437	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	1	17578207	17578208	1	G	core_nonrep	6	1	1
Rue3-1-31	1	17579278	17579279	1	A	core_nonrep	3	1	1.25
Rue3-1-31	1	17594795	17594796	1	G	core_nonrep	13	1	1
Rue3-1-31	1	17594889	17594890	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17595555	17595556	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	1	17595915	17595916	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17599668	17599669	1	G	core_nonrep	17	0.8	1
Rue3-1-31	1	17600902	17600903	2	TC	core_nonrep	5	1	1
Rue3-1-31	1	17605377	17605378	1	T	nonrep	3	0.75	1
Rue3-1-31	1	17607152	17607153	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	17607729	17607730	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	17607734	17607735	1	T	core_nonrep	8	1	1
Rue3-1-31	1	17608793	17608794	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	17615100	17615101	2	AA	core_nonrep	10	1	1
Rue3-1-31	1	17616436	17616437	1	A	core_nonrep	8	1	1
Rue3-1-31	1	17616995	17616996	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	17618261	17618262	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17621683	17621684	2	CA	core_nonrep	4	0.8	1
Rue3-1-31	1	17621684	17621685	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	17622227	17622228	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	17625819	17625820	1	G	core_nonrep	6	1	1
Rue3-1-31	1	17634708	17634709	1	C	core_nonrep	7	0.8	1
Rue3-1-31	1	17635776	17635777	1	A	core_nonrep	3	1	1
Rue3-1-31	1	17635898	17635899	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	1	17636009	17636010	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17643519	17643520	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	17643621	17643622	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17644881	17644882	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17645242	17645243	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17645364	17645365	1	T	core_nonrep	12	1	1
Rue3-1-31	1	17645383	17645384	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17645787	17645788	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	17645788	17645789	1	A	core_nonrep	9	1	1
Rue3-1-31	1	17645975	17645976	1	A	core_nonrep	3	1	1
Rue3-1-31	1	17646285	17646286	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	17647776	17647777	1	A	core_nonrep	13	1	1
Rue3-1-31	1	17651275	17651276	1	C	core_nonrep	5	0.75	1
Rue3-1-31	1	17651572	17651573	2	AC	core_nonrep	10	1	1
Rue3-1-31	1	17651775	17651776	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	1	17675944	17675945	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17679058	17679059	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	17682081	17682082	1	T	core_nonrep	14	1	1
Rue3-1-31	1	17687834	17687835	2	TA	core_nonrep	5	1	1
Rue3-1-31	1	17690699	17690700	1	A	core_nonrep	7	1	1
Rue3-1-31	1	17694799	17694800	3	GTA	core_nonrep	6	0.833333	1
Rue3-1-31	1	17699761	17699762	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17699929	17699930	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	17701616	17701617	1	G	core_nonrep	4	1	1
Rue3-1-31	1	17704019	17704020	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	17708605	17708606	1	C	nonrep	3	1	1
Rue3-1-31	1	17708805	17708806	1	T	core_nonrep	7	1	1
Rue3-1-31	1	17712378	17712379	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17712820	17712821	1	C	core_nonrep	5	1	1
Rue3-1-31	1	17715957	17715958	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17716317	17716318	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17733443	17733444	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17733444	17733445	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17733628	17733629	1	A	core_nonrep	6	1	1
Rue3-1-31	1	17735112	17735113	1	T	nonrep	3	1	1
Rue3-1-31	1	17735850	17735851	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	17737690	17737691	2	TG	core_nonrep	8	0.888889	1
Rue3-1-31	1	17743334	17743335	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17751316	17751317	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17759521	17759522	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17763226	17763227	1	A	core_nonrep	10	1	1
Rue3-1-31	1	17766324	17766325	1	T	core_nonrep	6	1	1
Rue3-1-31	1	17766325	17766326	2	AC	core_nonrep	7	1	1
Rue3-1-31	1	17766801	17766802	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	17769632	17769633	1	T	core_nonrep	9	1	1
Rue3-1-31	1	17769887	17769888	1	C	core_nonrep	5	1	1
Rue3-1-31	1	17772707	17772708	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	1	17779050	17779051	2	AT	core_nonrep	6	1	1
Rue3-1-31	1	17786047	17786048	1	T	core_nonrep	8	1	1
Rue3-1-31	1	17787640	17787641	1	T	core_nonrep	9	1	1
Rue3-1-31	1	17788498	17788499	1	A	core_nonrep	7	0.7	1
Rue3-1-31	1	17788691	17788692	1	T	core_nonrep	4	1	1.16667
Rue3-1-31	1	17793181	17793182	1	T	core_nonrep	9	1	1
Rue3-1-31	1	17796319	17796320	3	CTT	core_nonrep	8	0.777778	1
Rue3-1-31	1	17806109	17806110	2	TA	core_nonrep	3	1	1
Rue3-1-31	1	17806468	17806469	1	T	core_nonrep	8	1	1
Rue3-1-31	1	17808513	17808514	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	1	17810558	17810559	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17810814	17810815	1	T	core_nonrep	7	1	1
Rue3-1-31	1	17810947	17810948	1	T	core_nonrep	13	1	1
Rue3-1-31	1	17819360	17819361	1	A	core_nonrep	13	1	1
Rue3-1-31	1	17819569	17819570	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17824848	17824849	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	17824878	17824879	1	T	core	3	0.75	1.33333
Rue3-1-31	1	17837671	17837672	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	17840247	17840248	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	17842909	17842910	1	A	core_nonrep	5	1	1
Rue3-1-31	1	17844078	17844079	1	A	nonrep	3	0.75	1
Rue3-1-31	1	17845737	17845738	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	17854077	17854078	2	GT	nonrep	11	0.916667	1
Rue3-1-31	1	17857625	17857626	1	G	core_nonrep	13	1	1
Rue3-1-31	1	17857992	17857993	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	1	17860239	17860240	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	17865379	17865380	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	17865724	17865725	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17867802	17867803	1	A	core_nonrep	8	1	1
Rue3-1-31	1	17870622	17870623	1	T	core_nonrep	3	1	1
Rue3-1-31	1	17899190	17899191	1	T	nonrep	3	1	1
Rue3-1-31	1	17941777	17941778	1	T	core_nonrep	18	1	1
Rue3-1-31	1	17941801	17941802	1	G	core_nonrep	15	1	1
Rue3-1-31	1	17942889	17942890	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	17943738	17943739	1	A	core_nonrep	9	0.9	1
Rue3-1-31	1	17945446	17945447	1	G	core_nonrep	9	1	1
Rue3-1-31	1	17956374	17956375	1	T	core_nonrep	12	1	1
Rue3-1-31	1	17965621	17965622	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	17970889	17970890	1	T	core_nonrep	5	1	1
Rue3-1-31	1	17991211	17991212	1	G	core_nonrep	6	1	1
Rue3-1-31	1	17992938	17992939	1	A	core_nonrep	4	1	1
Rue3-1-31	1	17999634	17999635	1	G	core_nonrep	8	1	1
Rue3-1-31	1	18004050	18004051	1	C	core_nonrep	5	1	1
Rue3-1-31	1	18013940	18013941	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18026849	18026850	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18029792	18029793	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	1	18034412	18034413	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	18043823	18043824	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18054240	18054241	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18059137	18059138	2	AT	core_nonrep	9	1	1
Rue3-1-31	1	18061872	18061873	1	T	nonrep	4	0.8	1
Rue3-1-31	1	18063168	18063169	2	TT	core_nonrep	11	0.733333	1
Rue3-1-31	1	18068240	18068241	2	AA	core_nonrep	8	0.888889	1
Rue3-1-31	1	18068488	18068489	1	A	core_nonrep	10	0.8	1
Rue3-1-31	1	18068650	18068651	1	C	core_nonrep	7	1	1
Rue3-1-31	1	18081369	18081370	1	A	core_nonrep	6	0.75	1
Rue3-1-31	1	18082564	18082565	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18084142	18084143	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18089214	18089215	1	A	core_nonrep	19	1	1
Rue3-1-31	1	18091842	18091843	1	G	core_nonrep	6	1	1
Rue3-1-31	1	18096610	18096611	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18097979	18097980	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18098443	18098444	1	T	core_nonrep	4	1	1.2
Rue3-1-31	1	18099043	18099044	1	G	nonrep	3	1	1
Rue3-1-31	1	18102225	18102226	1	T	core_nonrep	13	1	1
Rue3-1-31	1	18103611	18103612	1	T	core_nonrep	14	1	1
Rue3-1-31	1	18104182	18104183	1	T	core_nonrep	11	1	1
Rue3-1-31	1	18113293	18113294	1	C	core_nonrep	20	0.842105	1
Rue3-1-31	1	18115039	18115040	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	18115114	18115115	1	T	core_nonrep	13	1	1
Rue3-1-31	1	18115654	18115655	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18115783	18115784	2	AA	nonrep	6	0.857143	1
Rue3-1-31	1	18127728	18127729	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	18127804	18127805	1	A	core_nonrep	8	1	1
Rue3-1-31	1	18129501	18129502	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18130797	18130798	1	C	core_nonrep	3	1	1
Rue3-1-31	1	18132073	18132074	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	18133526	18133527	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18139930	18139931	1	G	core_nonrep	9	1	1
Rue3-1-31	1	18141002	18141003	1	T	core_nonrep	11	1	1
Rue3-1-31	1	18141003	18141004	2	AA	core_nonrep	11	1	1
Rue3-1-31	1	18142822	18142823	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18178285	18178286	1	C	core_nonrep	7	1	1
Rue3-1-31	1	18182481	18182482	1	G	core_nonrep	17	0.944444	1
Rue3-1-31	1	18189145	18189146	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	18210512	18210513	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18214065	18214066	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18216016	18216017	1	A	core_nonrep	3	1	1
Rue3-1-31	1	18216018	18216019	1	G	core_nonrep	3	1	1
Rue3-1-31	1	18216255	18216256	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	18219859	18219860	1	G	core_nonrep	9	1	1
Rue3-1-31	1	18224384	18224385	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	1	18231981	18231982	1	T	core_nonrep	12	1	1
Rue3-1-31	1	18247636	18247637	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18274397	18274398	1	T	nonrep	3	1	1
Rue3-1-31	1	18278722	18278723	1	T	core_nonrep	10	1	1
Rue3-1-31	1	18293486	18293487	2	AA	nonrep	3	1	1
Rue3-1-31	1	18293759	18293760	1	C	core_nonrep	6	1	1
Rue3-1-31	1	18296659	18296660	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	18301091	18301092	1	G	core_nonrep	15	1	1
Rue3-1-31	1	18302507	18302508	1	C	core_nonrep	7	1	1
Rue3-1-31	1	18302967	18302968	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18306060	18306061	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	18306641	18306642	2	CT	core_nonrep	3	1	1
Rue3-1-31	1	18312797	18312798	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	18312798	18312799	2	AG	core_nonrep	3	0.75	1
Rue3-1-31	1	18320326	18320327	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18321075	18321076	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	18326448	18326449	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	18326911	18326912	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	18330499	18330500	1	G	core_nonrep	3	1	1
Rue3-1-31	1	18330547	18330548	2	TT	core_nonrep	8	0.888889	1
Rue3-1-31	1	18341872	18341873	1	A	nonrep	4	0.8	1
Rue3-1-31	1	18345275	18345276	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	18345701	18345702	1	G	core_nonrep	4	1	1
Rue3-1-31	1	18364707	18364708	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18365905	18365906	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	18373986	18373987	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	18375194	18375195	1	T	nonrep	3	0.75	1
Rue3-1-31	1	18375263	18375264	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	18379131	18379132	2	AA	core_nonrep	13	0.857143	1
Rue3-1-31	1	18380334	18380335	1	T	core_nonrep	9	1	1
Rue3-1-31	1	18385838	18385839	1	A	core_nonrep	10	1	1
Rue3-1-31	1	18386252	18386253	1	A	core_nonrep	8	1	1
Rue3-1-31	1	18386300	18386301	1	T	nonrep	3	1	1
Rue3-1-31	1	18387303	18387304	1	A	core_nonrep	12	0.818182	1
Rue3-1-31	1	18389059	18389060	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18389752	18389753	1	A	core_nonrep	19	1	1
Rue3-1-31	1	18395576	18395577	1	T	core_nonrep	10	1	1
Rue3-1-31	1	18395578	18395579	1	C	core_nonrep	10	1	1
Rue3-1-31	1	18395879	18395880	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	18402466	18402467	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	18424612	18424613	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18426150	18426151	1	G	core_nonrep	5	1	1
Rue3-1-31	1	18430670	18430671	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18431693	18431694	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18435642	18435643	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18441811	18441812	1	C	core_nonrep	5	1	1
Rue3-1-31	1	18441903	18441904	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18443185	18443186	1	T	core_nonrep	8	1	1
Rue3-1-31	1	18451048	18451049	1	G	core_nonrep	13	0.909091	1
Rue3-1-31	1	18455042	18455043	1	A	core_nonrep	9	1	1
Rue3-1-31	1	18461429	18461430	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	18463869	18463870	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18467555	18467556	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18469136	18469137	1	T	core_nonrep	10	0.769231	1
Rue3-1-31	1	18469421	18469422	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18469822	18469823	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18470027	18470028	2	TG	core_nonrep	4	1	1
Rue3-1-31	1	18470099	18470100	1	C	core_nonrep	4	1	1
Rue3-1-31	1	18481838	18481839	1	A	nonrep	3	1	1
Rue3-1-31	1	18488769	18488770	1	C	core_nonrep	8	1	1
Rue3-1-31	1	18493662	18493663	1	A	core_nonrep	9	0.8	1
Rue3-1-31	1	18495102	18495103	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	18495222	18495223	2	AA	core_nonrep	13	0.785714	1
Rue3-1-31	1	18498863	18498864	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18504011	18504012	1	C	core_nonrep	21	0.944444	1
Rue3-1-31	1	18511350	18511351	1	G	core_nonrep	4	1	1
Rue3-1-31	1	18511598	18511599	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18515768	18515769	2	AG	core_nonrep	9	0.692308	1
Rue3-1-31	1	18515769	18515770	1	G	core_nonrep	11	0.769231	1
Rue3-1-31	1	18516449	18516450	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18521538	18521539	1	T	core_nonrep	15	1	1
Rue3-1-31	1	18523757	18523758	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18560921	18560922	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	18561425	18561426	2	AA	core_nonrep	13	0.909091	1
Rue3-1-31	1	18565240	18565241	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18565382	18565383	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	1	18567939	18567940	1	A	core_nonrep	12	0.9	1
Rue3-1-31	1	18567946	18567947	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	18572171	18572172	1	T	core_nonrep	18	0.941176	1
Rue3-1-31	1	18572952	18572953	1	G	core_nonrep	7	1	1
Rue3-1-31	1	18590918	18590919	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	18605813	18605814	1	T	core_nonrep	8	1	1
Rue3-1-31	1	18610046	18610047	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	18628210	18628211	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	18628359	18628360	1	A	nonrep	3	0.75	1
Rue3-1-31	1	18628360	18628361	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18630001	18630002	1	G	core_nonrep	4	1	1
Rue3-1-31	1	18630207	18630208	3	TTT	core_nonrep	6	1	1
Rue3-1-31	1	18632120	18632121	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18632124	18632125	1	C	core_nonrep	3	1	1
Rue3-1-31	1	18633984	18633985	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	18646176	18646177	2	AA	core_nonrep	6	1	1
Rue3-1-31	1	18648900	18648901	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18650441	18650442	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18651408	18651409	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18653502	18653503	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18653655	18653656	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18657367	18657368	1	C	core_nonrep	8	1	1
Rue3-1-31	1	18661185	18661186	1	T	core_nonrep	8	1	1
Rue3-1-31	1	18664763	18664764	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18672038	18672039	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18673031	18673032	2	TA	core_nonrep	3	1	1
Rue3-1-31	1	18673550	18673551	1	A	core_nonrep	3	1	1
Rue3-1-31	1	18673551	18673552	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18674054	18674055	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	18675487	18675488	1	A	core_nonrep	3	1	1
Rue3-1-31	1	18680624	18680625	1	G	core_nonrep	8	0.8	1
Rue3-1-31	1	18700557	18700558	1	T	nonrep	6	1	1
Rue3-1-31	1	18701972	18701973	1	C	core_nonrep	10	1	1
Rue3-1-31	1	18712592	18712593	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18712699	18712700	1	C	core_nonrep	19	1	1
Rue3-1-31	1	18716009	18716010	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18717795	18717796	1	C	core_nonrep	8	1	1
Rue3-1-31	1	18720851	18720852	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	1	18722495	18722496	1	T	core_nonrep	13	1	1
Rue3-1-31	1	18722843	18722844	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18722997	18722998	1	T	core_nonrep	8	1	1
Rue3-1-31	1	18723036	18723037	1	T	core_nonrep	7	1	1
Rue3-1-31	1	18723042	18723043	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	18734358	18734359	1	C	core_nonrep	4	1	1
Rue3-1-31	1	18738487	18738488	1	G	nonrep	3	1	1
Rue3-1-31	1	18739450	18739451	3	TAA	core_nonrep	4	1	1
Rue3-1-31	1	18739638	18739639	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18739672	18739673	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18739919	18739920	1	C	core_nonrep	7	1	1
Rue3-1-31	1	18739941	18739942	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18739942	18739943	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18742772	18742773	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	18743468	18743469	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18757575	18757576	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	18760464	18760465	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18761249	18761250	1	A	core_nonrep	10	1	1
Rue3-1-31	1	18762796	18762797	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	18773581	18773582	1	A	core_nonrep	3	1	1
Rue3-1-31	1	18783372	18783373	1	T	core_nonrep	3	1	1
Rue3-1-31	1	18792150	18792151	1	G	core_nonrep	3	1	1
Rue3-1-31	1	18793399	18793400	1	T	core_nonrep	4	1	1
Rue3-1-31	1	18793401	18793402	1	A	core_nonrep	6	1	1
Rue3-1-31	1	18793689	18793690	2	TC	core_nonrep	8	0.875	1
Rue3-1-31	1	18797577	18797578	1	G	core_nonrep	7	1	1
Rue3-1-31	1	18809062	18809063	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18821742	18821743	1	A	core_nonrep	4	1	1
Rue3-1-31	1	18841774	18841775	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18842327	18842328	1	G	nonrep	3	1	1
Rue3-1-31	1	18842539	18842540	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	18846387	18846388	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18847783	18847784	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	18860479	18860480	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	18865247	18865248	1	T	core_nonrep	6	1	1
Rue3-1-31	1	18890256	18890257	1	T	core_nonrep	5	1	1
Rue3-1-31	1	18897008	18897009	1	T	nonrep	3	0.75	1
Rue3-1-31	1	18901948	18901949	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	18904214	18904215	1	A	core_nonrep	14	1	1
Rue3-1-31	1	18922345	18922346	1	C	core_nonrep	3	1	1
Rue3-1-31	1	18926084	18926085	1	G	core_nonrep	6	1	1
Rue3-1-31	1	18926086	18926087	1	G	core_nonrep	6	1	1
Rue3-1-31	1	18946151	18946152	1	A	core_nonrep	7	1	1
Rue3-1-31	1	18946802	18946803	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18947154	18947155	1	C	core_nonrep	6	1	1
Rue3-1-31	1	18947228	18947229	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	18948743	18948744	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	18948744	18948745	1	C	core_nonrep	9	1	1
Rue3-1-31	1	18952279	18952280	1	A	core_nonrep	8	1	1
Rue3-1-31	1	18963846	18963847	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	18975286	18975287	1	A	core_nonrep	5	1	1
Rue3-1-31	1	18975958	18975959	1	G	core_nonrep	3	1	1
Rue3-1-31	1	18984946	18984947	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	18988390	18988391	1	G	core_nonrep	7	0.875	1
Rue3-1-31	1	18990190	18990191	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	19001884	19001885	2	AA	core_nonrep	5	0.833333	1
Rue3-1-31	1	19002151	19002152	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19003169	19003170	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	19006697	19006698	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	19006698	19006699	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	19007910	19007911	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19014060	19014061	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	19014076	19014077	1	A	core_nonrep	10	1	1
Rue3-1-31	1	19014602	19014603	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19015089	19015090	1	T	core_nonrep	6	1	1
Rue3-1-31	1	19017521	19017522	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	19018273	19018274	1	A	nonrep	5	0.833333	1
Rue3-1-31	1	19020494	19020495	1	A	core_nonrep	7	1	1
Rue3-1-31	1	19021164	19021165	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19021256	19021257	1	A	core_nonrep	7	1	1
Rue3-1-31	1	19021762	19021763	3	ATA	core_nonrep	3	1	1
Rue3-1-31	1	19021876	19021877	1	C	core_nonrep	4	1	1
Rue3-1-31	1	19022521	19022522	1	G	core_nonrep	8	1	1
Rue3-1-31	1	19025632	19025633	3	CTC	core_nonrep	6	1	1
Rue3-1-31	1	19026031	19026032	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19026036	19026037	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19026195	19026196	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	19026698	19026699	1	C	core_nonrep	5	1	1
Rue3-1-31	1	19028969	19028970	1	T	nonrep	3	0.75	1
Rue3-1-31	1	19043282	19043283	1	T	core_nonrep	8	1	1
Rue3-1-31	1	19043410	19043411	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	19044813	19044814	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19051582	19051583	1	T	core_nonrep	16	1	1
Rue3-1-31	1	19051940	19051941	1	T	core_nonrep	6	1	1
Rue3-1-31	1	19053410	19053411	1	T	core_nonrep	16	1	1
Rue3-1-31	1	19055033	19055034	1	T	core_nonrep	9	0.714286	1
Rue3-1-31	1	19056180	19056181	1	C	core_nonrep	15	1	1
Rue3-1-31	1	19069091	19069092	1	T	core_nonrep	12	1	1
Rue3-1-31	1	19084657	19084658	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	19085076	19085077	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	19085116	19085117	1	T	core_nonrep	10	1	1
Rue3-1-31	1	19085426	19085427	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	19086240	19086241	1	T	core_nonrep	9	1	1
Rue3-1-31	1	19086549	19086550	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19093276	19093277	1	C	core_nonrep	4	1	1
Rue3-1-31	1	19129940	19129941	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	19178624	19178625	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19219230	19219231	1	C	core_nonrep	12	1	1
Rue3-1-31	1	19221953	19221954	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19224277	19224278	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	19224408	19224409	1	A	core_nonrep	4	1	1
Rue3-1-31	1	19228555	19228556	1	T	nonrep	3	1	1
Rue3-1-31	1	19233069	19233070	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19236785	19236786	1	G	core_nonrep	5	1	1
Rue3-1-31	1	19249001	19249002	1	A	core_nonrep	5	1	1.14286
Rue3-1-31	1	19249664	19249665	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	1	19249850	19249851	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	19254384	19254385	1	A	core_nonrep	10	1	1
Rue3-1-31	1	19254606	19254607	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	19255086	19255087	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19255087	19255088	1	G	core_nonrep	7	1	1
Rue3-1-31	1	19255646	19255647	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19256277	19256278	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	1	19256503	19256504	1	C	core_nonrep	5	1	1
Rue3-1-31	1	19257510	19257511	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	19258530	19258531	1	G	nonrep	3	0.75	1
Rue3-1-31	1	19258531	19258532	1	A	nonrep	4	1	1
Rue3-1-31	1	19278946	19278947	1	A	nonrep	3	0.75	1
Rue3-1-31	1	19279576	19279577	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19280497	19280498	1	A	core_nonrep	7	1	1
Rue3-1-31	1	19287379	19287380	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	19299933	19299934	1	A	core_nonrep	8	1	1
Rue3-1-31	1	19301169	19301170	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19302875	19302876	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19306018	19306019	1	T	core_nonrep	11	1	1
Rue3-1-31	1	19314805	19314806	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	19317828	19317829	1	G	core_nonrep	16	1	1
Rue3-1-31	1	19330588	19330589	1	A	core_nonrep	4	1	1
Rue3-1-31	1	19336739	19336740	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	19336972	19336973	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19339478	19339479	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19359973	19359974	3	TGG	core_nonrep	12	0.733333	1
Rue3-1-31	1	19370860	19370861	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19371413	19371414	1	A	nonrep	3	0.75	1
Rue3-1-31	1	19373237	19373238	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19373311	19373312	1	G	core_nonrep	8	1	1
Rue3-1-31	1	19373755	19373756	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19375893	19375894	1	T	core_nonrep	16	0.933333	1
Rue3-1-31	1	19376869	19376870	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	19384559	19384560	1	A	core_nonrep	8	1	1
Rue3-1-31	1	19384958	19384959	1	G	core_nonrep	6	0.857143	1.22222
Rue3-1-31	1	19385089	19385090	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	19387354	19387355	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	1	19393209	19393210	1	T	core_nonrep	6	1	1
Rue3-1-31	1	19394503	19394504	1	A	core_nonrep	12	0.7	1.25
Rue3-1-31	1	19394504	19394505	1	G	core	12	0.75	1.2381
Rue3-1-31	1	19394875	19394876	1	G	core_nonrep	3	1	1
Rue3-1-31	1	19402255	19402256	1	T	core_nonrep	8	1	1
Rue3-1-31	1	19403021	19403022	2	GA	core_nonrep	3	1	1
Rue3-1-31	1	19404635	19404636	1	A	core_nonrep	4	1	1
Rue3-1-31	1	19410172	19410173	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	19411000	19411001	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19413001	19413002	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19421933	19421934	1	T	core_nonrep	8	1	1
Rue3-1-31	1	19422621	19422622	1	T	core_nonrep	12	1	1
Rue3-1-31	1	19423812	19423813	1	T	core_nonrep	7	0.714286	1.2
Rue3-1-31	1	19427282	19427283	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	19428426	19428427	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19429868	19429869	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	19431598	19431599	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19441337	19441338	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19442559	19442560	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	19445575	19445576	1	C	nonrep	4	1	1
Rue3-1-31	1	19447885	19447886	1	T	nonrep	3	1	1
Rue3-1-31	1	19448428	19448429	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	1	19477657	19477658	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	19478753	19478754	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19487690	19487691	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19487809	19487810	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19487939	19487940	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	19495410	19495411	1	T	core_nonrep	14	1	1
Rue3-1-31	1	19499713	19499714	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19499963	19499964	1	G	nonrep	3	1	1
Rue3-1-31	1	19499965	19499966	1	C	nonrep	3	1	1
Rue3-1-31	1	19500542	19500543	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19502832	19502833	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19510606	19510607	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19510607	19510608	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19511024	19511025	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	19512736	19512737	1	C	core_nonrep	10	0.909091	1
Rue3-1-31	1	19528045	19528046	1	G	core_nonrep	9	1	1
Rue3-1-31	1	19529344	19529345	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	19540668	19540669	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	19542567	19542568	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19543115	19543116	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19551197	19551198	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19551474	19551475	1	T	nonrep	6	1	1
Rue3-1-31	1	19552290	19552291	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19554096	19554097	1	A	nonrep	3	0.75	1
Rue3-1-31	1	19557123	19557124	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	1	19559844	19559845	1	G	core_nonrep	5	0.75	1
Rue3-1-31	1	19569274	19569275	1	A	core_nonrep	15	1	1
Rue3-1-31	1	19585017	19585018	1	A	core_nonrep	4	1	1
Rue3-1-31	1	19591599	19591600	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	1	19591897	19591898	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	19592662	19592663	1	G	core_nonrep	9	1	1
Rue3-1-31	1	19598335	19598336	1	T	nonrep	3	0.75	1
Rue3-1-31	1	19602674	19602675	1	C	core_nonrep	12	1	1
Rue3-1-31	1	19602675	19602676	2	TT	core_nonrep	12	1	1
Rue3-1-31	1	19604981	19604982	1	G	core_nonrep	12	0.888889	1
Rue3-1-31	1	19622817	19622818	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19635382	19635383	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19636444	19636445	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	19645395	19645396	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	19657548	19657549	1	G	core_nonrep	4	1	1
Rue3-1-31	1	19657657	19657658	1	C	core_nonrep	5	1	1
Rue3-1-31	1	19658715	19658716	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	19667419	19667420	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	19670639	19670640	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	19675410	19675411	1	A	core_nonrep	8	1	1
Rue3-1-31	1	19677823	19677824	1	G	core_nonrep	5	1	1
Rue3-1-31	1	19691740	19691741	2	CT	nonrep	5	1	1
Rue3-1-31	1	19700544	19700545	2	CC	core_nonrep	4	1	1
Rue3-1-31	1	19702826	19702827	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	19703306	19703307	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	19719199	19719200	1	T	core_nonrep	8	1	1
Rue3-1-31	1	19722603	19722604	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19722962	19722963	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19744141	19744142	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19744143	19744144	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	1	19749107	19749108	1	T	core_nonrep	7	1	1
Rue3-1-31	1	19750559	19750560	1	A	core_nonrep	8	1	1
Rue3-1-31	1	19762887	19762888	1	A	core_nonrep	12	1	1
Rue3-1-31	1	19768978	19768979	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19774461	19774462	1	T	core_nonrep	9	1	1
Rue3-1-31	1	19775397	19775398	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	19775950	19775951	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	19784192	19784193	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19784940	19784941	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	19796377	19796378	1	G	core_nonrep	10	1	1
Rue3-1-31	1	19797984	19797985	1	T	core_nonrep	9	1	1
Rue3-1-31	1	19798191	19798192	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	19799402	19799403	2	TG	core_nonrep	9	1	1
Rue3-1-31	1	19800074	19800075	1	C	core_nonrep	6	1	1
Rue3-1-31	1	19806928	19806929	1	T	core_nonrep	8	1	1
Rue3-1-31	1	19809267	19809268	1	A	core_nonrep	7	1	1
Rue3-1-31	1	19815443	19815444	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19823069	19823070	1	T	nonrep	3	1	1
Rue3-1-31	1	19826547	19826548	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19829272	19829273	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19829284	19829285	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	1	19829491	19829492	1	C	core_nonrep	7	1	1
Rue3-1-31	1	19829935	19829936	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19830612	19830613	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	19833119	19833120	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19833120	19833121	1	A	core_nonrep	5	1	1
Rue3-1-31	1	19833710	19833711	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	19836074	19836075	1	T	core_nonrep	10	1	1
Rue3-1-31	1	19839565	19839566	1	T	core_nonrep	6	1	1
Rue3-1-31	1	19840342	19840343	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	19847421	19847422	2	AA	core_nonrep	6	1	1
Rue3-1-31	1	19848897	19848898	1	G	core_nonrep	13	1	1
Rue3-1-31	1	19852339	19852340	1	C	core_nonrep	10	0.8	1
Rue3-1-31	1	19852420	19852421	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	19852518	19852519	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	19856109	19856110	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	19856110	19856111	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	19856969	19856970	1	G	core_nonrep	7	1	1
Rue3-1-31	1	19860211	19860212	1	A	core_nonrep	9	1	1
Rue3-1-31	1	19864876	19864877	1	T	core_nonrep	6	1	1
Rue3-1-31	1	19865635	19865636	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19877290	19877291	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	19879421	19879422	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19881633	19881634	2	CT	core_nonrep	7	0.833333	1
Rue3-1-31	1	19882531	19882532	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19883304	19883305	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	19888229	19888230	1	A	core_nonrep	6	1	1
Rue3-1-31	1	19891799	19891800	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	19893853	19893854	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19901250	19901251	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	1	19901584	19901585	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	19912309	19912310	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19912361	19912362	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	19912367	19912368	1	C	core_nonrep	5	1	1
Rue3-1-31	1	19913288	19913289	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	19914371	19914372	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	1	19918919	19918920	1	T	core_nonrep	4	1	1
Rue3-1-31	1	19920141	19920142	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19920142	19920143	1	G	core_nonrep	3	1	1
Rue3-1-31	1	19934791	19934792	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	19935169	19935170	1	G	core_nonrep	9	0.75	1
Rue3-1-31	1	19935381	19935382	1	A	core_nonrep	7	1	1
Rue3-1-31	1	19939669	19939670	1	T	core_nonrep	5	1	1
Rue3-1-31	1	19942921	19942922	1	G	core_nonrep	14	1	1
Rue3-1-31	1	19949872	19949873	1	T	core_nonrep	3	1	1
Rue3-1-31	1	19951632	19951633	1	A	core_nonrep	10	0.8	1
Rue3-1-31	1	19952430	19952431	1	A	core_nonrep	4	1	1
Rue3-1-31	1	19955329	19955330	1	A	core_nonrep	10	1	1
Rue3-1-31	1	19967780	19967781	1	C	core_nonrep	8	0.75	1
Rue3-1-31	1	19978669	19978670	1	A	core_nonrep	3	1	1
Rue3-1-31	1	19997360	19997361	1	C	core_nonrep	4	1	1
Rue3-1-31	1	20002030	20002031	1	A	core_nonrep	7	1	1
Rue3-1-31	1	20003996	20003997	2	AG	core_nonrep	10	1	1
Rue3-1-31	1	20020659	20020660	1	G	core_nonrep	9	0.727273	1
Rue3-1-31	1	20021057	20021058	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20024134	20024135	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	20025560	20025561	1	A	core_nonrep	3	1	1
Rue3-1-31	1	20029258	20029259	1	T	core_nonrep	6	1	1
Rue3-1-31	1	20029761	20029762	2	CT	core_nonrep	10	0.9	1
Rue3-1-31	1	20038367	20038368	1	A	core_nonrep	8	1	1
Rue3-1-31	1	20045292	20045293	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	1	20050338	20050339	1	T	core_nonrep	11	0.727273	1
Rue3-1-31	1	20069556	20069557	1	G	core_nonrep	8	0.75	1
Rue3-1-31	1	20080955	20080956	1	A	core_nonrep	13	1	1
Rue3-1-31	1	20094771	20094772	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20097584	20097585	1	T	nonrep	3	0.75	1
Rue3-1-31	1	20100913	20100914	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	20109574	20109575	1	A	core_nonrep	7	1	1
Rue3-1-31	1	20110228	20110229	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20110670	20110671	1	T	core_nonrep	6	1	1
Rue3-1-31	1	20140572	20140573	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	1	20141955	20141956	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20142203	20142204	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	20143951	20143952	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	1	20145548	20145549	1	G	core_nonrep	3	1	1
Rue3-1-31	1	20148518	20148519	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	20153592	20153593	1	C	core_nonrep	3	1	1
Rue3-1-31	1	20155001	20155002	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	20155373	20155374	1	A	core_nonrep	3	1	1
Rue3-1-31	1	20155753	20155754	1	T	core_nonrep	7	1	1
Rue3-1-31	1	20157208	20157209	1	C	core_nonrep	6	1	1
Rue3-1-31	1	20161033	20161034	1	C	nonrep	4	1	1
Rue3-1-31	1	20163402	20163403	1	A	core_nonrep	9	1	1
Rue3-1-31	1	20166175	20166176	2	TT	core_nonrep	7	0.875	1
Rue3-1-31	1	20169240	20169241	1	T	core_nonrep	6	1	1
Rue3-1-31	1	20173577	20173578	1	A	core_nonrep	7	1	1
Rue3-1-31	1	20181375	20181376	1	T	nonrep	3	0.75	1
Rue3-1-31	1	20182906	20182907	1	T	nonrep	3	1	1
Rue3-1-31	1	20189938	20189939	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	20190270	20190271	1	G	core_nonrep	15	0.909091	1
Rue3-1-31	1	20192332	20192333	1	C	core_nonrep	7	1	1
Rue3-1-31	1	20193162	20193163	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	20198481	20198482	1	C	core_nonrep	4	1	1
Rue3-1-31	1	20210100	20210101	1	T	nonrep	5	0.714286	1
Rue3-1-31	1	20211320	20211321	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	20211455	20211456	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20211892	20211893	1	G	core_nonrep	3	1	1
Rue3-1-31	1	20217509	20217510	1	C	core_nonrep	4	1	1
Rue3-1-31	1	20219134	20219135	1	G	core_nonrep	13	1	1
Rue3-1-31	1	20223937	20223938	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20224710	20224711	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20230716	20230717	1	T	core_nonrep	10	1	1
Rue3-1-31	1	20246773	20246774	2	TC	core_nonrep	7	0.857143	1
Rue3-1-31	1	20248312	20248313	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20248346	20248347	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	20248794	20248795	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	20248986	20248987	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20294833	20294834	1	T	core_nonrep	12	1	1
Rue3-1-31	1	20294836	20294837	1	C	core_nonrep	12	1	1
Rue3-1-31	1	20310672	20310673	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	20312458	20312459	1	T	core_nonrep	9	1	1
Rue3-1-31	1	20333021	20333022	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	20348943	20348944	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	20401669	20401670	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	20425240	20425241	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	20426424	20426425	1	T	core_nonrep	11	1	1
Rue3-1-31	1	20428732	20428733	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	20455069	20455070	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20460609	20460610	2	GA	core_nonrep	4	0.75	1
Rue3-1-31	1	20492301	20492302	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	20501001	20501002	1	T	nonrep	4	0.8	1
Rue3-1-31	1	20514177	20514178	1	A	core_nonrep	11	0.875	1
Rue3-1-31	1	20524416	20524417	1	A	nonrep	7	0.875	1
Rue3-1-31	1	20535765	20535766	3	GTT	core_nonrep	4	1	1
Rue3-1-31	1	20563032	20563033	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	20563051	20563052	2	GT	core_nonrep	8	1	1
Rue3-1-31	1	20567366	20567367	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20580948	20580949	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	20591849	20591850	1	G	nonrep	3	0.75	1
Rue3-1-31	1	20601523	20601524	1	A	core_nonrep	3	1	1
Rue3-1-31	1	20636138	20636139	1	G	core_nonrep	10	0.875	1
Rue3-1-31	1	20675744	20675745	1	A	core_nonrep	3	1	1
Rue3-1-31	1	20700590	20700591	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20703316	20703317	1	T	core_nonrep	7	1	1
Rue3-1-31	1	20704689	20704690	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20716287	20716288	1	A	core_nonrep	12	0.818182	1
Rue3-1-31	1	20727330	20727331	1	T	core_nonrep	10	1	1
Rue3-1-31	1	20729540	20729541	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	20737745	20737746	1	T	nonrep	3	1	1
Rue3-1-31	1	20737980	20737981	1	C	core_nonrep	5	1	1
Rue3-1-31	1	20747035	20747036	2	CT	nonrep	5	1	1
Rue3-1-31	1	20750447	20750448	2	TA	core_nonrep	9	1	1
Rue3-1-31	1	20761152	20761153	1	A	nonrep	5	0.833333	1
Rue3-1-31	1	20763757	20763758	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20764555	20764556	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	1	20765795	20765796	1	G	core_nonrep	9	0.875	1
Rue3-1-31	1	20765796	20765797	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	20772477	20772478	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20772674	20772675	1	A	core_nonrep	6	1	1
Rue3-1-31	1	20774815	20774816	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	1	20777069	20777070	1	A	core_nonrep	6	1	1
Rue3-1-31	1	20778251	20778252	1	G	core_nonrep	9	0.875	1
Rue3-1-31	1	20789185	20789186	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20790485	20790486	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20791151	20791152	1	A	core_nonrep	6	1	1
Rue3-1-31	1	20791161	20791162	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20792985	20792986	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	20798679	20798680	1	A	nonrep	3	1	1
Rue3-1-31	1	20803129	20803130	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20803424	20803425	1	A	nonrep	3	1	1
Rue3-1-31	1	20813005	20813006	1	T	core_nonrep	14	1	1
Rue3-1-31	1	20816880	20816881	1	A	core_nonrep	6	1	1
Rue3-1-31	1	20817353	20817354	1	T	core_nonrep	6	1	1
Rue3-1-31	1	20817515	20817516	1	G	core_nonrep	6	1	1
Rue3-1-31	1	20818503	20818504	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	20820364	20820365	1	A	core_nonrep	10	1	1
Rue3-1-31	1	20820751	20820752	1	C	core_nonrep	3	1	1
Rue3-1-31	1	20820857	20820858	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20821362	20821363	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20821622	20821623	1	A	nonrep	3	0.75	1
Rue3-1-31	1	20832247	20832248	1	C	core_nonrep	10	1	1
Rue3-1-31	1	20833636	20833637	1	A	core_nonrep	14	1	1
Rue3-1-31	1	20834347	20834348	2	AT	core_nonrep	13	1	1
Rue3-1-31	1	20834859	20834860	1	T	core_nonrep	8	0.8	1
Rue3-1-31	1	20835121	20835122	1	A	nonrep	4	1	1
Rue3-1-31	1	20835122	20835123	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20837981	20837982	1	G	core_nonrep	8	1	1
Rue3-1-31	1	20838368	20838369	1	T	nonrep	3	1	1
Rue3-1-31	1	20839008	20839009	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	20839009	20839010	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	20839565	20839566	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	20858332	20858333	1	A	core_nonrep	15	1	1
Rue3-1-31	1	20864386	20864387	2	TC	core_nonrep	5	0.714286	1
Rue3-1-31	1	20867759	20867760	2	AT	core_nonrep	5	0.833333	1
Rue3-1-31	1	20872806	20872807	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	20874702	20874703	1	A	core_nonrep	7	1	1
Rue3-1-31	1	20877071	20877072	1	A	core_nonrep	4	1	1
Rue3-1-31	1	20877086	20877087	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	20877295	20877296	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20877383	20877384	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	20897147	20897148	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	20900532	20900533	1	A	nonrep	6	0.857143	1
Rue3-1-31	1	20901656	20901657	1	G	core_nonrep	13	1	1
Rue3-1-31	1	20908046	20908047	1	G	core_nonrep	8	1	1
Rue3-1-31	1	20915570	20915571	1	T	core_nonrep	4	1	1
Rue3-1-31	1	20926937	20926938	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	20926953	20926954	1	A	core_nonrep	3	1	1
Rue3-1-31	1	20926956	20926957	1	G	nonrep	3	1	1
Rue3-1-31	1	20926986	20926987	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20933549	20933550	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	1	20933989	20933990	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	20935316	20935317	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	20935318	20935319	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	20939388	20939389	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	20945860	20945861	1	G	core_nonrep	5	1	1
Rue3-1-31	1	20945861	20945862	1	T	core_nonrep	5	1	1
Rue3-1-31	1	20945960	20945961	1	A	core_nonrep	9	1	1.33333
Rue3-1-31	1	20945961	20945962	2	TT	core_nonrep	9	1	1.33333
Rue3-1-31	1	20947711	20947712	1	T	core_nonrep	8	0.8	1.28571
Rue3-1-31	1	20955142	20955143	3	GAA	core_nonrep	5	0.8	1
Rue3-1-31	1	20955340	20955341	1	A	core_nonrep	7	1	1
Rue3-1-31	1	20955385	20955386	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	20959671	20959672	2	GC	core_nonrep	5	0.833333	1
Rue3-1-31	1	20968434	20968435	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20974463	20974464	1	A	core_nonrep	5	1	1
Rue3-1-31	1	20992210	20992211	1	T	core_nonrep	13	1	1
Rue3-1-31	1	20994079	20994080	1	T	core_nonrep	3	1	1
Rue3-1-31	1	20996581	20996582	1	T	core_nonrep	7	0.7	1
Rue3-1-31	1	21021958	21021959	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	21037632	21037633	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21067089	21067090	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21067609	21067610	1	G	core_nonrep	6	1	1
Rue3-1-31	1	21067711	21067712	1	C	core_nonrep	6	1	1
Rue3-1-31	1	21069125	21069126	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	21069336	21069337	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	21070541	21070542	1	C	core_nonrep	7	0.875	1
Rue3-1-31	1	21072390	21072391	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21075003	21075004	1	T	core_nonrep	17	0.9375	1
Rue3-1-31	1	21075931	21075932	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	21079434	21079435	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21082439	21082440	1	G	core_nonrep	7	1	1
Rue3-1-31	1	21088537	21088538	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	21093716	21093717	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	21093717	21093718	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	21101285	21101286	1	A	core_nonrep	7	1	1
Rue3-1-31	1	21104252	21104253	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21104600	21104601	1	T	nonrep	3	1	1
Rue3-1-31	1	21104839	21104840	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21104986	21104987	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21105063	21105064	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	21122022	21122023	1	T	core_nonrep	19	0.9375	1
Rue3-1-31	1	21150575	21150576	1	A	core_nonrep	7	1	1
Rue3-1-31	1	21151041	21151042	1	A	core_nonrep	5	1	1
Rue3-1-31	1	21156687	21156688	1	T	core_nonrep	9	1	1
Rue3-1-31	1	21161312	21161313	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21162770	21162771	1	T	core_nonrep	13	1	1
Rue3-1-31	1	21179285	21179286	1	C	core_nonrep	13	0.9	1
Rue3-1-31	1	21184666	21184667	1	A	core_nonrep	10	1	1
Rue3-1-31	1	21184942	21184943	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	21191988	21191989	1	T	core_nonrep	8	1	1
Rue3-1-31	1	21192399	21192400	1	C	core_nonrep	6	0.8	1
Rue3-1-31	1	21192869	21192870	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	21195259	21195260	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21195666	21195667	1	G	core_nonrep	9	0.7	1
Rue3-1-31	1	21195829	21195830	1	A	core_nonrep	10	1	1
Rue3-1-31	1	21195869	21195870	1	A	core_nonrep	7	1	1
Rue3-1-31	1	21203585	21203586	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	21210308	21210309	1	G	core_nonrep	3	1	1
Rue3-1-31	1	21212650	21212651	1	T	nonrep	3	1	1
Rue3-1-31	1	21215360	21215361	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21215864	21215865	1	T	nonrep	3	1	1
Rue3-1-31	1	21217785	21217786	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	21218791	21218792	2	TT	core_nonrep	9	0.777778	1
Rue3-1-31	1	21221227	21221228	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	1	21223180	21223181	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21226850	21226851	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21231510	21231511	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21235430	21235431	2	TA	core_nonrep	5	0.8	1
Rue3-1-31	1	21236017	21236018	1	T	core_nonrep	13	1	1
Rue3-1-31	1	21239571	21239572	1	A	nonrep	3	1	1
Rue3-1-31	1	21244949	21244950	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21245241	21245242	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21246428	21246429	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	21253666	21253667	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21255526	21255527	1	A	core_nonrep	13	1	1
Rue3-1-31	1	21255958	21255959	1	T	nonrep	3	1	1
Rue3-1-31	1	21260868	21260869	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	21261426	21261427	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21261577	21261578	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21262479	21262480	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21265635	21265636	2	GC	core_nonrep	3	1	1
Rue3-1-31	1	21267905	21267906	1	T	core_nonrep	15	1	1
Rue3-1-31	1	21268351	21268352	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	21268353	21268354	1	G	core_nonrep	7	1	1
Rue3-1-31	1	21314912	21314913	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	1	21319292	21319293	1	C	core_nonrep	6	0.8	1
Rue3-1-31	1	21320179	21320180	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	21320180	21320181	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	21320188	21320189	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	21324064	21324065	1	T	core_nonrep	8	1	1
Rue3-1-31	1	21330035	21330036	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21330036	21330037	2	GT	core_nonrep	4	0.75	1
Rue3-1-31	1	21331811	21331812	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	21337988	21337989	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	21339579	21339580	1	T	nonrep	4	1	1
Rue3-1-31	1	21342977	21342978	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21344444	21344445	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	21358996	21358997	2	CC	core_nonrep	9	0.818182	1
Rue3-1-31	1	21365008	21365009	3	ATT	core_nonrep	3	1	1
Rue3-1-31	1	21369522	21369523	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	21373652	21373653	1	C	core_nonrep	3	1	1
Rue3-1-31	1	21374231	21374232	1	C	core_nonrep	5	1	1
Rue3-1-31	1	21379029	21379030	1	C	core_nonrep	5	1	1
Rue3-1-31	1	21379608	21379609	1	T	nonrep	7	0.777778	1
Rue3-1-31	1	21383869	21383870	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	21385180	21385181	1	A	core_nonrep	10	1	1
Rue3-1-31	1	21386948	21386949	1	A	core_nonrep	12	1	1
Rue3-1-31	1	21387348	21387349	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	21389603	21389604	1	A	core_nonrep	12	1	1
Rue3-1-31	1	21390594	21390595	1	C	core_nonrep	7	1	1
Rue3-1-31	1	21390755	21390756	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21393141	21393142	1	G	core_nonrep	4	1	1
Rue3-1-31	1	21393246	21393247	1	G	core_nonrep	3	1	1
Rue3-1-31	1	21393247	21393248	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21398563	21398564	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21399729	21399730	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	21409611	21409612	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21410404	21410405	1	G	core_nonrep	6	1	1
Rue3-1-31	1	21410971	21410972	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21412115	21412116	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	21412239	21412240	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	1	21412241	21412242	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21412963	21412964	1	T	core_nonrep	9	1	1
Rue3-1-31	1	21414669	21414670	1	T	nonrep	3	1	1
Rue3-1-31	1	21415085	21415086	1	G	nonrep	3	0.75	1
Rue3-1-31	1	21417119	21417120	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	1	21417299	21417300	1	C	core_nonrep	9	1	1
Rue3-1-31	1	21418304	21418305	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21418353	21418354	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	21419923	21419924	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	21421623	21421624	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	21423329	21423330	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21442658	21442659	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21444236	21444237	3	ATC	core_nonrep	6	1	1
Rue3-1-31	1	21444484	21444485	1	G	core_nonrep	6	1	1
Rue3-1-31	1	21444485	21444486	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21444537	21444538	1	A	nonrep	3	0.75	1
Rue3-1-31	1	21448860	21448861	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21449085	21449086	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	21451594	21451595	2	AT	core_nonrep	8	0.777778	1
Rue3-1-31	1	21465972	21465973	1	C	core_nonrep	3	1	1
Rue3-1-31	1	21465973	21465974	1	C	core_nonrep	3	1	1
Rue3-1-31	1	21468461	21468462	1	T	core_nonrep	11	1	1
Rue3-1-31	1	21469158	21469159	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21469981	21469982	3	AAG	core_nonrep	5	0.833333	1
Rue3-1-31	1	21470104	21470105	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21472013	21472014	1	G	core_nonrep	4	0.8	1.11111
Rue3-1-31	1	21472021	21472022	1	G	core_nonrep	4	1	1.14286
Rue3-1-31	1	21473123	21473124	2	AC	core_nonrep	6	1	1
Rue3-1-31	1	21473691	21473692	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	21478461	21478462	1	T	core_nonrep	7	0.875	1
Rue3-1-31	1	21479930	21479931	1	A	core_nonrep	18	1	1
Rue3-1-31	1	21481778	21481779	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21487536	21487537	3	TAA	core_nonrep	11	1	1
Rue3-1-31	1	21494697	21494698	1	G	core_nonrep	6	1	1
Rue3-1-31	1	21496900	21496901	1	A	core_nonrep	10	1	1
Rue3-1-31	1	21499147	21499148	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21499416	21499417	1	G	core_nonrep	9	1	1
Rue3-1-31	1	21500259	21500260	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	21501474	21501475	1	A	core_nonrep	12	0.733333	1
Rue3-1-31	1	21501536	21501537	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21502307	21502308	1	A	core_nonrep	9	0.7	1
Rue3-1-31	1	21502310	21502311	2	CT	core_nonrep	9	1	1
Rue3-1-31	1	21504500	21504501	1	T	core_nonrep	8	1	1
Rue3-1-31	1	21506338	21506339	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21507677	21507678	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21507916	21507917	1	A	core_nonrep	16	1	1
Rue3-1-31	1	21508347	21508348	3	TAA	core_nonrep	3	0.75	1
Rue3-1-31	1	21512010	21512011	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21513153	21513154	1	G	core_nonrep	4	1	1
Rue3-1-31	1	21514008	21514009	1	G	core_nonrep	4	1	1
Rue3-1-31	1	21515916	21515917	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	1	21518038	21518039	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	1	21518391	21518392	1	G	core_nonrep	5	1	1
Rue3-1-31	1	21523053	21523054	1	A	core_nonrep	6	1	1
Rue3-1-31	1	21526013	21526014	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	21543177	21543178	1	T	core_nonrep	15	0.833333	1
Rue3-1-31	1	21545712	21545713	1	G	core_nonrep	5	1	1
Rue3-1-31	1	21549113	21549114	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21549451	21549452	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21564275	21564276	1	A	core_nonrep	11	0.846154	1
Rue3-1-31	1	21574785	21574786	2	AA	core_nonrep	9	0.9	1
Rue3-1-31	1	21576011	21576012	1	A	core_nonrep	5	1	1
Rue3-1-31	1	21580459	21580460	1	G	core_nonrep	5	1	1
Rue3-1-31	1	21583102	21583103	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	21583349	21583350	1	G	nonrep	7	1	1
Rue3-1-31	1	21585059	21585060	1	A	core_nonrep	11	1	1
Rue3-1-31	1	21587672	21587673	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21591130	21591131	1	A	core_nonrep	6	1	1
Rue3-1-31	1	21605545	21605546	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21609850	21609851	1	G	core_nonrep	16	0.941176	1
Rue3-1-31	1	21610479	21610480	2	TA	core_nonrep	9	1	1
Rue3-1-31	1	21610803	21610804	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	21611109	21611110	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21623916	21623917	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21623924	21623925	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21624029	21624030	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	21624396	21624397	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	21624402	21624403	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	21625766	21625767	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	1	21630274	21630275	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21631394	21631395	1	G	nonrep	4	0.8	1
Rue3-1-31	1	21631591	21631592	1	T	core_nonrep	8	1	1
Rue3-1-31	1	21635454	21635455	1	G	core_nonrep	7	1	1
Rue3-1-31	1	21640273	21640274	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21640275	21640276	1	C	core_nonrep	4	1	1
Rue3-1-31	1	21644535	21644536	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21647328	21647329	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21647486	21647487	1	A	core_nonrep	5	1	1
Rue3-1-31	1	21664406	21664407	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	21666201	21666202	1	T	nonrep	3	0.75	1
Rue3-1-31	1	21669846	21669847	1	A	core_nonrep	9	1	1
Rue3-1-31	1	21678642	21678643	1	T	core_nonrep	11	1	1
Rue3-1-31	1	21679614	21679615	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	21680847	21680848	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	21682622	21682623	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	1	21684406	21684407	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	21686314	21686315	1	C	core_nonrep	8	1	1
Rue3-1-31	1	21686341	21686342	1	C	core_nonrep	14	1	1
Rue3-1-31	1	21686869	21686870	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	21688353	21688354	1	T	core_nonrep	9	1	1
Rue3-1-31	1	21692498	21692499	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	21692663	21692664	2	AA	nonrep	3	1	1
Rue3-1-31	1	21692748	21692749	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21694335	21694336	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	21708858	21708859	3	AGA	core_nonrep	3	0.75	1
Rue3-1-31	1	21712679	21712680	1	A	core_nonrep	5	1	1
Rue3-1-31	1	21712681	21712682	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21712682	21712683	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	21715236	21715237	2	AA	core_nonrep	7	1	1
Rue3-1-31	1	21715633	21715634	1	G	core_nonrep	9	0.833333	1
Rue3-1-31	1	21715924	21715925	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21716667	21716668	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21716952	21716953	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21717748	21717749	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21719238	21719239	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21720147	21720148	1	A	core_nonrep	12	0.727273	1
Rue3-1-31	1	21723545	21723546	1	G	core_nonrep	6	1	1
Rue3-1-31	1	21724543	21724544	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	21726481	21726482	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21726922	21726923	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21729566	21729567	1	T	core_nonrep	9	1	1
Rue3-1-31	1	21734809	21734810	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21736294	21736295	1	A	core_nonrep	6	1	1
Rue3-1-31	1	21737495	21737496	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21738656	21738657	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21739191	21739192	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	21739229	21739230	1	T	core_nonrep	8	1	1
Rue3-1-31	1	21739448	21739449	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	21741742	21741743	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	1	21749559	21749560	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	1	21749705	21749706	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21856104	21856105	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21860292	21860293	1	T	core_nonrep	4	1	1
Rue3-1-31	1	21860374	21860375	1	A	core_nonrep	4	1	1
Rue3-1-31	1	21860377	21860378	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	21863105	21863106	3	GGT	core_nonrep	6	1	1
Rue3-1-31	1	21863260	21863261	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	1	21869085	21869086	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21869925	21869926	1	A	core_nonrep	6	1	1
Rue3-1-31	1	21870383	21870384	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	1	21873559	21873560	1	A	nonrep	3	0.75	1
Rue3-1-31	1	21876005	21876006	1	T	nonrep	3	1	1
Rue3-1-31	1	21884933	21884934	1	A	core_nonrep	3	1	1
Rue3-1-31	1	21885236	21885237	1	T	core_nonrep	6	1	1
Rue3-1-31	1	21891362	21891363	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	21892215	21892216	1	T	core_nonrep	5	1	1
Rue3-1-31	1	21892267	21892268	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21892600	21892601	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	21893300	21893301	1	T	core_nonrep	7	1	1
Rue3-1-31	1	21896106	21896107	1	C	core_nonrep	4	1	1
Rue3-1-31	1	21896850	21896851	2	GC	core_nonrep	6	0.8	1
Rue3-1-31	1	21901502	21901503	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	21901834	21901835	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	1	21911414	21911415	1	A	core_nonrep	25	1	1
Rue3-1-31	1	21911952	21911953	1	T	core_nonrep	3	1	1
Rue3-1-31	1	21913650	21913651	1	A	core_nonrep	8	1	1
Rue3-1-31	1	21913930	21913931	1	C	core_nonrep	4	1	1
Rue3-1-31	1	21914388	21914389	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	1	21917438	21917439	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	21917439	21917440	1	G	core_nonrep	12	1	1
Rue3-1-31	1	21918330	21918331	1	A	core_nonrep	6	1	1
Rue3-1-31	1	21921952	21921953	1	A	core_nonrep	5	1	1
Rue3-1-31	1	21923204	21923205	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	21923206	21923207	2	AC	core_nonrep	4	1	1
Rue3-1-31	1	21923658	21923659	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	21937851	21937852	1	C	core_nonrep	9	1	1
Rue3-1-31	1	21994452	21994453	1	T	core_nonrep	7	1	1
Rue3-1-31	1	22184730	22184731	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	22239496	22239497	1	T	nonrep	3	0.75	1
Rue3-1-31	1	22280519	22280520	1	A	core_nonrep	15	1	1
Rue3-1-31	1	22282440	22282441	1	C	core_nonrep	6	1	1
Rue3-1-31	1	22282683	22282684	1	C	core_nonrep	9	1	1
Rue3-1-31	1	22282732	22282733	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	22284418	22284419	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22286133	22286134	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22287040	22287041	2	AC	core_nonrep	7	1	1
Rue3-1-31	1	22288974	22288975	1	G	core_nonrep	4	1	1
Rue3-1-31	1	22291320	22291321	1	A	core_nonrep	8	0.8	1
Rue3-1-31	1	22292099	22292100	1	A	core_nonrep	7	1	1
Rue3-1-31	1	22299252	22299253	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	22299674	22299675	1	A	core_nonrep	19	1	1
Rue3-1-31	1	22305067	22305068	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	1	22315213	22315214	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	22317292	22317293	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	22317371	22317372	1	T	nonrep	3	1	1
Rue3-1-31	1	22317531	22317532	1	T	core_nonrep	4	1	1
Rue3-1-31	1	22317566	22317567	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	1	22322012	22322013	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22322206	22322207	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	1	22322808	22322809	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22323009	22323010	1	T	core_nonrep	4	1	1
Rue3-1-31	1	22324515	22324516	2	GT	core_nonrep	6	0.833333	1
Rue3-1-31	1	22328729	22328730	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	22331459	22331460	3	GCT	core_nonrep	5	1	1
Rue3-1-31	1	22333027	22333028	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	22343190	22343191	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22343192	22343193	1	C	core_nonrep	8	1	1
Rue3-1-31	1	22347349	22347350	1	C	core_nonrep	5	0.833333	1.14286
Rue3-1-31	1	22349054	22349055	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	22349055	22349056	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22350726	22350727	1	G	core_nonrep	7	1	1
Rue3-1-31	1	22351082	22351083	1	G	core_nonrep	9	1	1
Rue3-1-31	1	22358565	22358566	2	TA	core_nonrep	8	1	1
Rue3-1-31	1	22366308	22366309	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	1	22366453	22366454	1	G	core_nonrep	13	1	1
Rue3-1-31	1	22370375	22370376	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	22375418	22375419	1	A	core_nonrep	12	1	1
Rue3-1-31	1	22375597	22375598	1	A	core_nonrep	7	1	1
Rue3-1-31	1	22376088	22376089	1	A	core_nonrep	8	1	1
Rue3-1-31	1	22376191	22376192	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	22379094	22379095	3	CGG	core_nonrep	7	1	1
Rue3-1-31	1	22379791	22379792	1	C	core_nonrep	5	1	1
Rue3-1-31	1	22380949	22380950	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22381666	22381667	1	G	core_nonrep	4	1	1
Rue3-1-31	1	22386064	22386065	2	TG	core_nonrep	7	0.714286	1
Rue3-1-31	1	22396304	22396305	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	22399076	22399077	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	1	22400164	22400165	1	C	core_nonrep	5	1	1
Rue3-1-31	1	22401185	22401186	2	AT	core_nonrep	8	0.8	1.375
Rue3-1-31	1	22408742	22408743	1	G	core_nonrep	6	1	1
Rue3-1-31	1	22422235	22422236	1	T	nonrep	4	1	1
Rue3-1-31	1	22433124	22433125	1	T	core_nonrep	9	1	1
Rue3-1-31	1	22433962	22433963	2	AC	core_nonrep	8	0.888889	1
Rue3-1-31	1	22438321	22438322	2	AA	core_nonrep	8	1	1
Rue3-1-31	1	22438895	22438896	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	22438996	22438997	1	T	core_nonrep	14	1	1
Rue3-1-31	1	22440360	22440361	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22442575	22442576	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22444461	22444462	3	TAG	core_nonrep	15	0.882353	1
Rue3-1-31	1	22446650	22446651	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	22459508	22459509	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	22461821	22461822	1	G	nonrep	5	1	1
Rue3-1-31	1	22463367	22463368	1	C	nonrep	8	0.8	1
Rue3-1-31	1	22466405	22466406	1	T	core_nonrep	18	0.944444	1
Rue3-1-31	1	22480777	22480778	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	22493820	22493821	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22494830	22494831	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	1	22496148	22496149	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22496492	22496493	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22500290	22500291	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	1	22500397	22500398	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22500751	22500752	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22501087	22501088	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	22502250	22502251	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22502263	22502264	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	22503568	22503569	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	1	22503689	22503690	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22505395	22505396	1	A	nonrep	3	1	1
Rue3-1-31	1	22507008	22507009	2	AA	core_nonrep	6	1	1
Rue3-1-31	1	22511780	22511781	1	A	core_nonrep	9	1	1
Rue3-1-31	1	22514900	22514901	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22515658	22515659	1	C	core_nonrep	13	1	1
Rue3-1-31	1	22520017	22520018	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22522749	22522750	1	A	core_nonrep	12	0.769231	1
Rue3-1-31	1	22523350	22523351	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22528931	22528932	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22529179	22529180	2	TC	core_nonrep	6	1	1
Rue3-1-31	1	22533685	22533686	2	AA	core_nonrep	10	0.875	1
Rue3-1-31	1	22534272	22534273	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22534273	22534274	1	T	core_nonrep	4	1	1
Rue3-1-31	1	22535137	22535138	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	22536642	22536643	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22536643	22536644	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22538680	22538681	1	A	core_nonrep	14	0.75	1
Rue3-1-31	1	22540253	22540254	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	22541732	22541733	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22541757	22541758	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22551360	22551361	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22552335	22552336	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22553086	22553087	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	22567414	22567415	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22568569	22568570	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	22568980	22568981	1	T	core_nonrep	9	0.875	1
Rue3-1-31	1	22572502	22572503	1	A	core_nonrep	12	1	1
Rue3-1-31	1	22574289	22574290	2	TT	core_nonrep	11	0.818182	1
Rue3-1-31	1	22574669	22574670	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22574670	22574671	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22575726	22575727	1	T	core_nonrep	7	1	1
Rue3-1-31	1	22577273	22577274	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	22577709	22577710	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22578470	22578471	1	C	core_nonrep	7	1	1
Rue3-1-31	1	22580239	22580240	1	A	core_nonrep	12	1	1
Rue3-1-31	1	22581399	22581400	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22586350	22586351	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	1	22589373	22589374	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	22591411	22591412	1	C	core_nonrep	6	1	1
Rue3-1-31	1	22594382	22594383	2	AG	nonrep	3	1	1
Rue3-1-31	1	22594744	22594745	1	C	core_nonrep	4	1	1
Rue3-1-31	1	22596939	22596940	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22597905	22597906	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	22598686	22598687	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	1	22600395	22600396	1	G	core_nonrep	3	1	1
Rue3-1-31	1	22602441	22602442	1	A	core_nonrep	8	1	1
Rue3-1-31	1	22602515	22602516	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22606276	22606277	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22607233	22607234	1	T	core_nonrep	6	1	1
Rue3-1-31	1	22607236	22607237	1	G	core_nonrep	7	1	1
Rue3-1-31	1	22608721	22608722	1	C	core_nonrep	6	1	1
Rue3-1-31	1	22610017	22610018	1	G	nonrep	3	1	1
Rue3-1-31	1	22610951	22610952	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22614645	22614646	1	A	nonrep	5	0.833333	1
Rue3-1-31	1	22621988	22621989	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22623981	22623982	1	C	core_nonrep	11	1	1
Rue3-1-31	1	22628202	22628203	1	G	core_nonrep	13	1	1
Rue3-1-31	1	22628413	22628414	1	C	nonrep	4	0.8	1
Rue3-1-31	1	22631390	22631391	1	C	core_nonrep	4	1	1
Rue3-1-31	1	22633729	22633730	1	C	core_nonrep	5	0.8	1
Rue3-1-31	1	22634320	22634321	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22649065	22649066	1	A	core_nonrep	8	1	1
Rue3-1-31	1	22676590	22676591	1	C	core_nonrep	33	1	1
Rue3-1-31	1	22713758	22713759	1	T	core_nonrep	10	1	1
Rue3-1-31	1	22719663	22719664	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22720900	22720901	1	A	core_nonrep	16	0.9	1
Rue3-1-31	1	22721730	22721731	2	TC	core_nonrep	10	1	1
Rue3-1-31	1	22721780	22721781	1	T	core_nonrep	12	1	1
Rue3-1-31	1	22722120	22722121	2	CT	core_nonrep	8	1	1
Rue3-1-31	1	22722457	22722458	1	C	core_nonrep	12	1	1
Rue3-1-31	1	22722796	22722797	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	22723262	22723263	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	1	22725847	22725848	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	22729196	22729197	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22733090	22733091	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22733249	22733250	1	T	core_nonrep	4	1	1
Rue3-1-31	1	22733812	22733813	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	22739252	22739253	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	22741636	22741637	1	G	core_nonrep	7	1	1
Rue3-1-31	1	22742880	22742881	1	A	core_nonrep	11	0.833333	1
Rue3-1-31	1	22742881	22742882	1	T	core_nonrep	11	1	1
Rue3-1-31	1	22742992	22742993	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22747725	22747726	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22767584	22767585	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	22778969	22778970	1	C	core_nonrep	8	1	1
Rue3-1-31	1	22784305	22784306	1	A	nonrep	3	1	1
Rue3-1-31	1	22798248	22798249	1	T	core_nonrep	11	0.9	1
Rue3-1-31	1	22798702	22798703	3	GTT	core_nonrep	3	0.75	1
Rue3-1-31	1	22798770	22798771	1	A	nonrep	3	0.75	1
Rue3-1-31	1	22799400	22799401	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	22799401	22799402	1	G	core_nonrep	3	1	1
Rue3-1-31	1	22801430	22801431	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	22801726	22801727	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	22803085	22803086	1	A	core_nonrep	7	1	1
Rue3-1-31	1	22803749	22803750	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	22809037	22809038	1	G	nonrep	3	0.75	1
Rue3-1-31	1	22810772	22810773	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	22812047	22812048	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22821309	22821310	1	T	core_nonrep	4	1	1
Rue3-1-31	1	22823988	22823989	1	A	core_nonrep	8	1	1
Rue3-1-31	1	22826167	22826168	1	T	core_nonrep	12	1	1
Rue3-1-31	1	22826168	22826169	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	1	22829054	22829055	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	22830975	22830976	1	G	core_nonrep	5	1	1
Rue3-1-31	1	22836707	22836708	1	A	nonrep	4	1	1
Rue3-1-31	1	22836956	22836957	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22837548	22837549	1	A	nonrep	3	0.75	1
Rue3-1-31	1	22837819	22837820	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22837985	22837986	3	TAT	core_nonrep	6	0.857143	1
Rue3-1-31	1	22844007	22844008	1	T	core_nonrep	12	0.9	1
Rue3-1-31	1	22844433	22844434	1	C	core_nonrep	16	0.9375	1
Rue3-1-31	1	22850857	22850858	1	A	nonrep	3	0.75	1
Rue3-1-31	1	22850988	22850989	1	C	core_nonrep	4	1	1
Rue3-1-31	1	22851023	22851024	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22865904	22865905	1	A	core_nonrep	8	1	1
Rue3-1-31	1	22866698	22866699	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	22872291	22872292	1	T	core_nonrep	14	1	1
Rue3-1-31	1	22872363	22872364	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	22872783	22872784	1	A	core_nonrep	10	1	1
Rue3-1-31	1	22872786	22872787	1	C	core_nonrep	10	1	1
Rue3-1-31	1	22879873	22879874	1	C	core_nonrep	5	1	1
Rue3-1-31	1	22880068	22880069	1	T	nonrep	3	1	1
Rue3-1-31	1	22880979	22880980	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22883685	22883686	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22889312	22889313	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	22894676	22894677	1	C	core_nonrep	3	1	1
Rue3-1-31	1	22895021	22895022	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	22895128	22895129	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22895129	22895130	2	TC	core_nonrep	5	1	1
Rue3-1-31	1	22896519	22896520	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22898590	22898591	1	T	core_nonrep	7	1	1
Rue3-1-31	1	22898591	22898592	1	G	core_nonrep	6	1	1
Rue3-1-31	1	22908261	22908262	1	T	core_nonrep	20	1	1
Rue3-1-31	1	22908340	22908341	1	C	core_nonrep	7	0.75	1
Rue3-1-31	1	22911131	22911132	1	T	core_nonrep	9	0.875	1
Rue3-1-31	1	22911481	22911482	1	A	core_nonrep	10	1	1
Rue3-1-31	1	22913557	22913558	1	C	core_nonrep	9	1	1
Rue3-1-31	1	22923348	22923349	1	T	core_nonrep	16	1	1
Rue3-1-31	1	22930811	22930812	1	G	core_nonrep	6	1	1
Rue3-1-31	1	22934965	22934966	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22935049	22935050	1	T	core_nonrep	8	1	1
Rue3-1-31	1	22936326	22936327	1	A	core_nonrep	4	1	1
Rue3-1-31	1	22937100	22937101	1	T	core_nonrep	12	1	1
Rue3-1-31	1	22939192	22939193	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22939773	22939774	1	T	core_nonrep	3	1	1
Rue3-1-31	1	22939868	22939869	1	A	nonrep	3	0.75	1
Rue3-1-31	1	22940672	22940673	1	A	core_nonrep	6	1	1
Rue3-1-31	1	22943395	22943396	1	G	core_nonrep	7	1	1
Rue3-1-31	1	22943776	22943777	1	T	nonrep	3	0.75	1
Rue3-1-31	1	22944926	22944927	1	A	core_nonrep	5	1	1
Rue3-1-31	1	22948481	22948482	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	22982318	22982319	1	A	core_nonrep	3	1	1
Rue3-1-31	1	22983173	22983174	1	A	nonrep	3	1	1
Rue3-1-31	1	22984549	22984550	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	1	22985763	22985764	1	C	core_nonrep	8	1	1
Rue3-1-31	1	22987282	22987283	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	1	22994333	22994334	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	23003710	23003711	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23008552	23008553	3	TCC	core_nonrep	16	0.933333	1
Rue3-1-31	1	23008957	23008958	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23019889	23019890	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	23023734	23023735	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	23030911	23030912	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	23032381	23032382	1	C	core_nonrep	11	1	1
Rue3-1-31	1	23033454	23033455	1	G	core_nonrep	7	1	1
Rue3-1-31	1	23034402	23034403	1	A	nonrep	3	1	1
Rue3-1-31	1	23035164	23035165	3	ATC	core_nonrep	4	0.75	1
Rue3-1-31	1	23039162	23039163	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23039638	23039639	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	1	23043242	23043243	1	C	core_nonrep	11	1	1
Rue3-1-31	1	23051478	23051479	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23053984	23053985	2	AC	core_nonrep	6	1	1
Rue3-1-31	1	23061676	23061677	2	TT	core_nonrep	11	1	1
Rue3-1-31	1	23062375	23062376	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23062794	23062795	1	A	core_nonrep	17	0.9375	1
Rue3-1-31	1	23062998	23062999	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	23063046	23063047	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23064103	23064104	1	G	core_nonrep	11	1	1
Rue3-1-31	1	23071957	23071958	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23076103	23076104	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	1	23076854	23076855	1	G	core_nonrep	8	1	1
Rue3-1-31	1	23080112	23080113	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23090811	23090812	1	G	core_nonrep	11	1	1
Rue3-1-31	1	23090966	23090967	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23105275	23105276	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23105380	23105381	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23106151	23106152	1	A	core_nonrep	8	1	1
Rue3-1-31	1	23110915	23110916	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23112600	23112601	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	1	23113141	23113142	1	G	core_nonrep	5	1	1
Rue3-1-31	1	23114084	23114085	1	A	core_nonrep	17	1	1
Rue3-1-31	1	23114561	23114562	2	GT	core_nonrep	3	1	1
Rue3-1-31	1	23133809	23133810	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	1	23138428	23138429	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	23139159	23139160	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	23142556	23142557	1	A	core_nonrep	9	1	1
Rue3-1-31	1	23151508	23151509	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23152872	23152873	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	23152971	23152972	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23153286	23153287	1	T	core_nonrep	8	1	1
Rue3-1-31	1	23156080	23156081	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23157014	23157015	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23160142	23160143	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	1	23161559	23161560	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23162224	23162225	2	AG	core_nonrep	10	0.9	1
Rue3-1-31	1	23164394	23164395	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23166856	23166857	1	G	core_nonrep	5	1	1
Rue3-1-31	1	23167301	23167302	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23167349	23167350	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23167354	23167355	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23169105	23169106	1	C	core_nonrep	7	1	1
Rue3-1-31	1	23171590	23171591	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23171781	23171782	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23172090	23172091	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	23176142	23176143	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23183789	23183790	1	A	core_nonrep	15	1	1
Rue3-1-31	1	23192696	23192697	1	C	core	4	0.75	1.16667
Rue3-1-31	1	23193738	23193739	3	TAC	core_nonrep	12	1	1
Rue3-1-31	1	23194145	23194146	1	G	nonrep	4	0.8	1
Rue3-1-31	1	23195721	23195722	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	23195755	23195756	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	23197638	23197639	1	A	core_nonrep	16	1	1
Rue3-1-31	1	23198148	23198149	1	T	core_nonrep	12	1	1
Rue3-1-31	1	23198841	23198842	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23200761	23200762	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	23200832	23200833	1	A	nonrep	4	1	1
Rue3-1-31	1	23201913	23201914	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	23201914	23201915	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	1	23202086	23202087	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23222523	23222524	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	1	23223487	23223488	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23227613	23227614	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23232725	23232726	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	23232728	23232729	2	GG	core_nonrep	9	1	1
Rue3-1-31	1	23235991	23235992	1	A	core_nonrep	15	0.75	1
Rue3-1-31	1	23241206	23241207	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23241238	23241239	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23242223	23242224	1	G	core_nonrep	7	1	1
Rue3-1-31	1	23243030	23243031	2	AC	core_nonrep	3	1	1
Rue3-1-31	1	23243071	23243072	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23246951	23246952	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	23247905	23247906	1	A	nonrep	3	1	1
Rue3-1-31	1	23248251	23248252	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23249534	23249535	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23256548	23256549	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	23259019	23259020	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23259066	23259067	1	A	core_nonrep	9	1	1
Rue3-1-31	1	23260581	23260582	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23261892	23261893	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23266099	23266100	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	23268092	23268093	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23280147	23280148	1	A	core_nonrep	14	0.866667	1
Rue3-1-31	1	23284038	23284039	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23285960	23285961	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23287796	23287797	1	G	core_nonrep	3	1	1
Rue3-1-31	1	23290191	23290192	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23290366	23290367	1	A	core_nonrep	6	0.8	1
Rue3-1-31	1	23293266	23293267	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	23296700	23296701	1	T	core_nonrep	9	0.714286	1
Rue3-1-31	1	23297234	23297235	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23297389	23297390	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23297986	23297987	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23308498	23308499	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23309275	23309276	1	T	nonrep	3	1	1
Rue3-1-31	1	23316783	23316784	1	T	core_nonrep	9	1	1
Rue3-1-31	1	23318129	23318130	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23324445	23324446	2	GA	core_nonrep	5	0.833333	1
Rue3-1-31	1	23325525	23325526	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23325881	23325882	1	G	core_nonrep	4	1	1
Rue3-1-31	1	23329900	23329901	1	T	core_nonrep	8	1	1
Rue3-1-31	1	23333076	23333077	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	23333840	23333841	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23333845	23333846	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	23336934	23336935	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23339310	23339311	1	T	core_nonrep	10	1	1
Rue3-1-31	1	23342106	23342107	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23342112	23342113	1	G	core_nonrep	5	1	1
Rue3-1-31	1	23342450	23342451	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	23344069	23344070	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23344177	23344178	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23344225	23344226	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23345065	23345066	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23363548	23363549	1	T	core_nonrep	8	1	1
Rue3-1-31	1	23365221	23365222	1	G	core_nonrep	8	1	1
Rue3-1-31	1	23365343	23365344	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23366203	23366204	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	23366215	23366216	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	23368569	23368570	1	T	core_nonrep	9	1	1
Rue3-1-31	1	23372102	23372103	1	C	core_nonrep	12	0.777778	1
Rue3-1-31	1	23372604	23372605	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23373574	23373575	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	1	23375914	23375915	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23375917	23375918	1	C	core_nonrep	4	1	1
Rue3-1-31	1	23376010	23376011	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23376825	23376826	1	T	nonrep	3	1	1
Rue3-1-31	1	23376880	23376881	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23376951	23376952	1	C	core_nonrep	7	1	1
Rue3-1-31	1	23376953	23376954	1	C	core_nonrep	6	1	1
Rue3-1-31	1	23377083	23377084	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23387694	23387695	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	23388393	23388394	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	1	23395628	23395629	1	G	core_nonrep	13	0.909091	1
Rue3-1-31	1	23396664	23396665	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23396665	23396666	1	G	core_nonrep	4	1	1
Rue3-1-31	1	23397296	23397297	1	G	core_nonrep	4	1	1
Rue3-1-31	1	23397989	23397990	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23398700	23398701	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	23399194	23399195	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	23399522	23399523	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23400590	23400591	3	TTT	core_nonrep	5	1	1
Rue3-1-31	1	23401183	23401184	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23402507	23402508	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	23402655	23402656	2	CA	core_nonrep	3	1	1
Rue3-1-31	1	23404802	23404803	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23406976	23406977	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23407079	23407080	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	23407263	23407264	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	23407273	23407274	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23410851	23410852	1	T	core_nonrep	10	1	1
Rue3-1-31	1	23413093	23413094	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	23414627	23414628	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	23415716	23415717	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23419929	23419930	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23430031	23430032	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	23431892	23431893	1	T	core_nonrep	13	0.857143	1
Rue3-1-31	1	23432834	23432835	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23434587	23434588	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23435308	23435309	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23436550	23436551	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	23438303	23438304	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23440513	23440514	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	23445544	23445545	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	23451351	23451352	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23452001	23452002	1	C	nonrep	3	1	1
Rue3-1-31	1	23454518	23454519	1	T	core_nonrep	11	1	1
Rue3-1-31	1	23454651	23454652	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23466893	23466894	1	T	core_nonrep	11	1	1
Rue3-1-31	1	23480054	23480055	1	G	core_nonrep	4	1	1
Rue3-1-31	1	23481490	23481491	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	23483382	23483383	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23486587	23486588	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	23493293	23493294	1	G	nonrep	3	1	1
Rue3-1-31	1	23498570	23498571	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	1	23502403	23502404	1	C	core_nonrep	8	0.875	1.07692
Rue3-1-31	1	23508384	23508385	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	23517711	23517712	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	23524207	23524208	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	23524218	23524219	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23538219	23538220	1	A	nonrep	3	0.75	1
Rue3-1-31	1	23543349	23543350	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23560162	23560163	2	CT	core_nonrep	7	1	1
Rue3-1-31	1	23569410	23569411	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23573183	23573184	1	T	core_nonrep	13	1	1
Rue3-1-31	1	23574821	23574822	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23574901	23574902	1	T	core_nonrep	9	0.9	1
Rue3-1-31	1	23575671	23575672	3	AAA	core_nonrep	4	1	1
Rue3-1-31	1	23575793	23575794	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23590611	23590612	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	23592272	23592273	1	A	core_nonrep	8	1	1
Rue3-1-31	1	23598149	23598150	1	C	core_nonrep	9	0.9	1
Rue3-1-31	1	23598995	23598996	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	1	23603417	23603418	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23604438	23604439	1	G	core_nonrep	4	1	1
Rue3-1-31	1	23611159	23611160	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	23615014	23615015	1	A	nonrep	5	1	1
Rue3-1-31	1	23615066	23615067	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	23615238	23615239	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	23615304	23615305	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	23616524	23616525	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	23616807	23616808	1	C	core_nonrep	5	1	1
Rue3-1-31	1	23622079	23622080	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	23622080	23622081	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	23625431	23625432	1	T	core_nonrep	8	1	1
Rue3-1-31	1	23635777	23635778	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	23638205	23638206	1	G	core_nonrep	7	1	1
Rue3-1-31	1	23638208	23638209	2	CC	core_nonrep	7	1	1
Rue3-1-31	1	23644843	23644844	1	T	core_nonrep	13	1	1
Rue3-1-31	1	23655790	23655791	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23664701	23664702	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23670709	23670710	1	A	core_nonrep	8	1	1
Rue3-1-31	1	23672121	23672122	1	T	core_nonrep	10	1	1
Rue3-1-31	1	23672122	23672123	2	GC	core_nonrep	10	1	1
Rue3-1-31	1	23679816	23679817	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23681279	23681280	1	A	core_nonrep	3	1	1
Rue3-1-31	1	23682129	23682130	1	T	core_nonrep	9	1	1
Rue3-1-31	1	23682282	23682283	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23683020	23683021	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	23683535	23683536	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23683591	23683592	1	G	core_nonrep	8	1	1
Rue3-1-31	1	23683721	23683722	2	CC	core_nonrep	4	1	1
Rue3-1-31	1	23684247	23684248	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	23684248	23684249	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23686994	23686995	1	T	nonrep	3	0.75	1
Rue3-1-31	1	23686995	23686996	1	A	nonrep	3	0.75	1
Rue3-1-31	1	23696994	23696995	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	23699061	23699062	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	23699911	23699912	1	C	core_nonrep	6	1	1
Rue3-1-31	1	23700345	23700346	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23722446	23722447	1	A	core_nonrep	9	0.714286	1
Rue3-1-31	1	23725855	23725856	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	1	23725910	23725911	2	TA	core_nonrep	3	1	1
Rue3-1-31	1	23725918	23725919	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	23727906	23727907	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23729540	23729541	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23733171	23733172	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	23737439	23737440	1	A	nonrep	3	1	1
Rue3-1-31	1	23737581	23737582	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23737864	23737865	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	1	23741219	23741220	2	TG	core_nonrep	7	1	1
Rue3-1-31	1	23742387	23742388	1	G	nonrep	3	0.75	1
Rue3-1-31	1	23742523	23742524	1	T	core_nonrep	8	1	1
Rue3-1-31	1	23742973	23742974	3	TTT	core_nonrep	12	1	1
Rue3-1-31	1	23744666	23744667	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23744832	23744833	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23748483	23748484	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23748484	23748485	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23749013	23749014	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23749651	23749652	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23752040	23752041	1	A	core_nonrep	7	1	1
Rue3-1-31	1	23752736	23752737	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	23757349	23757350	2	TT	nonrep	6	0.75	1
Rue3-1-31	1	23761004	23761005	1	T	core_nonrep	4	1	1
Rue3-1-31	1	23761484	23761485	3	TCC	core_nonrep	14	0.875	1
Rue3-1-31	1	23764866	23764867	1	A	core_nonrep	8	1	1
Rue3-1-31	1	23770999	23771000	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23778282	23778283	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23780444	23780445	1	G	core_nonrep	8	1	1
Rue3-1-31	1	23784154	23784155	1	A	core_nonrep	5	1	1
Rue3-1-31	1	23790277	23790278	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23807626	23807627	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	1	23812260	23812261	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23812634	23812635	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23812881	23812882	1	A	nonrep	3	0.75	1
Rue3-1-31	1	23814874	23814875	1	T	core_nonrep	7	1	1
Rue3-1-31	1	23816511	23816512	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23817671	23817672	2	CA	core_nonrep	7	0.75	1
Rue3-1-31	1	23821487	23821488	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23830997	23830998	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	23832789	23832790	1	C	core_nonrep	8	0.8	1
Rue3-1-31	1	23834068	23834069	2	AA	core_nonrep	3	1	1
Rue3-1-31	1	23834132	23834133	1	T	core_nonrep	6	1	1
Rue3-1-31	1	23837208	23837209	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23840294	23840295	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23844343	23844344	1	T	core_nonrep	10	0.9	1
Rue3-1-31	1	23845222	23845223	1	C	core_nonrep	20	1	1
Rue3-1-31	1	23857651	23857652	1	T	core_nonrep	10	1	1
Rue3-1-31	1	23864690	23864691	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23877684	23877685	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	23883049	23883050	1	G	nonrep	3	1	1
Rue3-1-31	1	23887620	23887621	1	G	core_nonrep	11	0.875	1
Rue3-1-31	1	23889294	23889295	1	A	core_nonrep	4	1	1
Rue3-1-31	1	23889740	23889741	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23891049	23891050	1	T	core_nonrep	5	1	1
Rue3-1-31	1	23891150	23891151	1	A	nonrep	4	1	1
Rue3-1-31	1	23895936	23895937	1	G	core_nonrep	8	1	1
Rue3-1-31	1	23899114	23899115	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	1	23906382	23906383	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23906920	23906921	1	C	core_nonrep	12	1	1
Rue3-1-31	1	23907345	23907346	1	A	core_nonrep	6	1	1
Rue3-1-31	1	23911593	23911594	1	A	core_nonrep	9	1	1
Rue3-1-31	1	23912040	23912041	1	C	core_nonrep	9	1	1
Rue3-1-31	1	23912326	23912327	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	23914820	23914821	1	C	core_nonrep	8	0.8	1
Rue3-1-31	1	23926160	23926161	1	G	core_nonrep	9	1	1
Rue3-1-31	1	23942456	23942457	1	C	core_nonrep	6	1	1
Rue3-1-31	1	23943580	23943581	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	23947796	23947797	1	A	core_nonrep	10	1	1
Rue3-1-31	1	23947803	23947804	1	A	core_nonrep	10	0.875	1
Rue3-1-31	1	23948469	23948470	1	G	core_nonrep	9	1	1
Rue3-1-31	1	23964655	23964656	1	T	core_nonrep	14	0.933333	1
Rue3-1-31	1	23977057	23977058	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	1	23981688	23981689	1	T	core_nonrep	3	1	1
Rue3-1-31	1	23995759	23995760	1	T	nonrep	3	0.75	1
Rue3-1-31	1	23999010	23999011	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24006602	24006603	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24007379	24007380	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24014475	24014476	1	G	core_nonrep	9	1	1
Rue3-1-31	1	24014476	24014477	1	A	core_nonrep	9	1	1
Rue3-1-31	1	24015436	24015437	1	G	core_nonrep	7	1	1
Rue3-1-31	1	24018874	24018875	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	24018877	24018878	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	24022849	24022850	1	T	core_nonrep	6	1	1
Rue3-1-31	1	24023206	24023207	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	24026995	24026996	1	A	core_nonrep	7	1	1
Rue3-1-31	1	24033121	24033122	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	1	24037853	24037854	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24037914	24037915	2	CT	core_nonrep	8	0.888889	1
Rue3-1-31	1	24040786	24040787	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	24040888	24040889	1	T	core_nonrep	7	1	1
Rue3-1-31	1	24044297	24044298	1	C	core_nonrep	8	1	1
Rue3-1-31	1	24046761	24046762	1	T	core_nonrep	10	1	1
Rue3-1-31	1	24048033	24048034	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	24052565	24052566	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24053039	24053040	1	C	core_nonrep	4	1	1
Rue3-1-31	1	24054981	24054982	2	TA	core_nonrep	9	1	1
Rue3-1-31	1	24056637	24056638	1	T	core_nonrep	18	0.928571	1
Rue3-1-31	1	24057129	24057130	1	T	core_nonrep	6	1	1
Rue3-1-31	1	24064177	24064178	1	C	core_nonrep	5	1	1
Rue3-1-31	1	24066481	24066482	1	C	core_nonrep	4	0.75	1
Rue3-1-31	1	24066766	24066767	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24067204	24067205	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	1	24067460	24067461	1	G	core_nonrep	11	1	1
Rue3-1-31	1	24067937	24067938	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	24075228	24075229	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	1	24075810	24075811	1	T	core_nonrep	5	1	1
Rue3-1-31	1	24076382	24076383	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24086362	24086363	1	A	core_nonrep	14	1	1
Rue3-1-31	1	24088204	24088205	1	T	nonrep	3	1	1
Rue3-1-31	1	24093085	24093086	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24094043	24094044	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	1	24096996	24096997	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	24104863	24104864	1	G	core_nonrep	4	1	1
Rue3-1-31	1	24105615	24105616	1	T	core_nonrep	6	1	1
Rue3-1-31	1	24108291	24108292	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24113384	24113385	1	T	core_nonrep	11	1	1
Rue3-1-31	1	24115360	24115361	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	1	24124533	24124534	1	T	nonrep	4	0.8	1
Rue3-1-31	1	24128995	24128996	1	C	core_nonrep	4	1	1.4
Rue3-1-31	1	24129095	24129096	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	24130630	24130631	1	A	nonrep	3	1	1
Rue3-1-31	1	24142909	24142910	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	1	24143471	24143472	2	TG	core_nonrep	4	1	1
Rue3-1-31	1	24182608	24182609	1	C	core_nonrep	8	1	1
Rue3-1-31	1	24187508	24187509	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	1	24191532	24191533	1	T	core_nonrep	10	1	1
Rue3-1-31	1	24194605	24194606	1	A	core_nonrep	11	1	1
Rue3-1-31	1	24197484	24197485	1	A	core_nonrep	9	1	1
Rue3-1-31	1	24199934	24199935	1	A	core_nonrep	9	1	1
Rue3-1-31	1	24204960	24204961	1	A	core_nonrep	4	1	1
Rue3-1-31	1	24205072	24205073	1	A	core_nonrep	4	1	1
Rue3-1-31	1	24209058	24209059	1	T	core_nonrep	12	0.888889	1
Rue3-1-31	1	24209590	24209591	1	G	core_nonrep	3	1	1
Rue3-1-31	1	24213594	24213595	1	C	core_nonrep	9	1	1
Rue3-1-31	1	24217796	24217797	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	24218226	24218227	1	A	core_nonrep	8	0.75	1
Rue3-1-31	1	24218414	24218415	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	24219052	24219053	1	C	core_nonrep	4	1	1
Rue3-1-31	1	24219692	24219693	1	A	core_nonrep	32	1	1
Rue3-1-31	1	24227935	24227936	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	24228998	24228999	1	T	core_nonrep	15	1	1
Rue3-1-31	1	24239952	24239953	2	GC	core_nonrep	15	0.785714	1
Rue3-1-31	1	24242400	24242401	1	T	core_nonrep	6	1	1
Rue3-1-31	1	24243145	24243146	1	C	core_nonrep	6	1	1
Rue3-1-31	1	24243910	24243911	2	CT	core_nonrep	3	1	1
Rue3-1-31	1	24244341	24244342	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24244536	24244537	1	T	core_nonrep	7	1	1
Rue3-1-31	1	24248336	24248337	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	24248337	24248338	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	24252620	24252621	1	A	core_nonrep	6	1	1
Rue3-1-31	1	24255203	24255204	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	1	24256242	24256243	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24257024	24257025	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	1	24263796	24263797	2	AA	core_nonrep	6	1	1
Rue3-1-31	1	24267227	24267228	1	G	core_nonrep	4	1	1
Rue3-1-31	1	24273715	24273716	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	24274875	24274876	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	24275554	24275555	2	CG	core_nonrep	6	0.857143	1
Rue3-1-31	1	24280537	24280538	3	TAA	core_nonrep	10	1	1
Rue3-1-31	1	24285868	24285869	1	G	core_nonrep	9	1	1
Rue3-1-31	1	24286553	24286554	3	TGT	core_nonrep	11	0.785714	1
Rue3-1-31	1	24292785	24292786	2	TG	core_nonrep	8	0.888889	1
Rue3-1-31	1	24295466	24295467	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	1	24295777	24295778	2	TT	core_nonrep	8	1	1
Rue3-1-31	1	24296935	24296936	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24301888	24301889	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	24304735	24304736	1	A	core_nonrep	9	0.7	1
Rue3-1-31	1	24307603	24307604	1	A	core_nonrep	4	1	1
Rue3-1-31	1	24308076	24308077	1	A	core_nonrep	8	0.8	1
Rue3-1-31	1	24327885	24327886	1	T	core_nonrep	5	1	1
Rue3-1-31	1	24339241	24339242	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	24351010	24351011	1	A	core_nonrep	6	1	1
Rue3-1-31	1	24351032	24351033	1	C	nonrep	3	1	1
Rue3-1-31	1	24353913	24353914	1	C	core_nonrep	5	1	1
Rue3-1-31	1	24354145	24354146	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24370131	24370132	1	G	nonrep	4	1	1
Rue3-1-31	1	24370801	24370802	3	TCT	core_nonrep	9	1	1
Rue3-1-31	1	24401988	24401989	1	C	core_nonrep	4	1	1
Rue3-1-31	1	24535022	24535023	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	24538238	24538239	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24538530	24538531	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24538809	24538810	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24540499	24540500	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	24540501	24540502	1	G	core_nonrep	4	1	1
Rue3-1-31	1	24542097	24542098	1	A	core_nonrep	4	1	1
Rue3-1-31	1	24550327	24550328	1	C	core_nonrep	7	1	1
Rue3-1-31	1	24553055	24553056	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	1	24559418	24559419	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	24562132	24562133	1	A	core_nonrep	6	1	1
Rue3-1-31	1	24562576	24562577	2	CT	core_nonrep	3	0.75	1
Rue3-1-31	1	24563654	24563655	1	C	core_nonrep	9	0.75	1
Rue3-1-31	1	24575063	24575064	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24586140	24586141	1	A	core_nonrep	4	1	1
Rue3-1-31	1	24593014	24593015	1	T	core_nonrep	7	1	1
Rue3-1-31	1	24601754	24601755	1	A	core_nonrep	12	1	1
Rue3-1-31	1	24618359	24618360	1	A	core_nonrep	17	1	1
Rue3-1-31	1	24618373	24618374	1	T	core_nonrep	17	0.928571	1
Rue3-1-31	1	24618508	24618509	1	A	core_nonrep	10	1	1
Rue3-1-31	1	24621527	24621528	1	T	core_nonrep	3	1	1
Rue3-1-31	1	24634557	24634558	1	T	core_nonrep	5	1	1
Rue3-1-31	1	24640017	24640018	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	24640018	24640019	1	C	core_nonrep	7	1	1
Rue3-1-31	1	24645386	24645387	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	24645391	24645392	1	G	core_nonrep	4	1	1
Rue3-1-31	1	24645875	24645876	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	24648987	24648988	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	24655149	24655150	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24656286	24656287	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	24661228	24661229	1	A	core_nonrep	12	1	1
Rue3-1-31	1	24662255	24662256	1	T	core_nonrep	11	1	1
Rue3-1-31	1	24665986	24665987	1	A	core_nonrep	6	1	1
Rue3-1-31	1	24676245	24676246	1	T	core_nonrep	7	1	1
Rue3-1-31	1	24679366	24679367	1	C	nonrep	3	0.75	1
Rue3-1-31	1	24691387	24691388	1	T	nonrep	3	1	1
Rue3-1-31	1	24696931	24696932	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	24698675	24698676	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24699102	24699103	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	24699223	24699224	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	24702029	24702030	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	24702990	24702991	1	C	core_nonrep	3	1	1
Rue3-1-31	1	24703032	24703033	1	T	core_nonrep	7	1	1
Rue3-1-31	1	24710857	24710858	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	1	24715102	24715103	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	24716146	24716147	1	C	core_nonrep	4	1	1
Rue3-1-31	1	24719071	24719072	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	24720698	24720699	1	T	core_nonrep	9	1	1
Rue3-1-31	1	24720712	24720713	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	1	24724513	24724514	1	T	core_nonrep	8	1	1
Rue3-1-31	1	24725441	24725442	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24728580	24728581	1	G	core_nonrep	5	1	1
Rue3-1-31	1	24736520	24736521	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	24751259	24751260	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	24755458	24755459	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24759215	24759216	1	C	core_nonrep	5	0.8	1
Rue3-1-31	1	24763753	24763754	1	T	core_nonrep	4	1	1
Rue3-1-31	1	24767583	24767584	2	CA	core_nonrep	10	1	1
Rue3-1-31	1	24772651	24772652	1	A	core_nonrep	5	1	1
Rue3-1-31	1	24774477	24774478	1	A	core_nonrep	3	1	1
Rue3-1-31	1	24776903	24776904	2	GC	core_nonrep	6	1	1
Rue3-1-31	1	24777408	24777409	1	G	nonrep	4	0.8	1
Rue3-1-31	1	24777845	24777846	1	T	core_nonrep	5	1	1
Rue3-1-31	1	24779025	24779026	1	T	core_nonrep	8	1	1
Rue3-1-31	1	24784640	24784641	1	C	core_nonrep	10	1	1
Rue3-1-31	1	24795206	24795207	1	A	core_nonrep	8	1	1
Rue3-1-31	1	24797094	24797095	1	A	nonrep	3	0.75	1
Rue3-1-31	1	24807785	24807786	1	T	core_nonrep	5	1	1
Rue3-1-31	1	24808665	24808666	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	1	24909545	24909546	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	1	24920191	24920192	1	G	core_nonrep	5	1	1
Rue3-1-31	1	24920672	24920673	1	T	core_nonrep	9	1	1
Rue3-1-31	1	24921225	24921226	1	T	core_nonrep	11	1	1
Rue3-1-31	1	24923063	24923064	1	A	core_nonrep	6	1	1
Rue3-1-31	1	24924569	24924570	1	T	nonrep	4	1	1
Rue3-1-31	1	24925798	24925799	1	T	core_nonrep	12	0.7	1
Rue3-1-31	1	24927566	24927567	1	A	core_nonrep	7	1	1
Rue3-1-31	1	24945787	24945788	1	A	core_nonrep	6	1	1
Rue3-1-31	1	25020910	25020911	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	25022620	25022621	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25022650	25022651	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	25032221	25032222	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	25035535	25035536	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	25038212	25038213	1	G	nonrep	3	1	1
Rue3-1-31	1	25039472	25039473	1	A	core_nonrep	3	1	1
Rue3-1-31	1	25043076	25043077	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25045011	25045012	1	A	core_nonrep	4	1	1
Rue3-1-31	1	25051278	25051279	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	25052712	25052713	1	A	core_nonrep	6	1	1
Rue3-1-31	1	25053687	25053688	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	25062375	25062376	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25064621	25064622	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	25070560	25070561	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	25095510	25095511	1	A	core_nonrep	7	1	1
Rue3-1-31	1	25104435	25104436	1	C	core_nonrep	12	1	1
Rue3-1-31	1	25115754	25115755	1	G	core_nonrep	13	1	1
Rue3-1-31	1	25116690	25116691	1	T	nonrep	4	1	1
Rue3-1-31	1	25122890	25122891	1	G	core_nonrep	5	1	1
Rue3-1-31	1	25122987	25122988	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	25123567	25123568	1	T	nonrep	3	0.75	1
Rue3-1-31	1	25128704	25128705	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25131256	25131257	1	G	core_nonrep	6	1	1
Rue3-1-31	1	25135627	25135628	1	T	core_nonrep	16	0.928571	1
Rue3-1-31	1	25138574	25138575	1	T	core_nonrep	7	1	1
Rue3-1-31	1	25138773	25138774	1	C	core_nonrep	7	1	1
Rue3-1-31	1	25151484	25151485	1	A	core_nonrep	10	1	1
Rue3-1-31	1	25176181	25176182	1	A	core_nonrep	4	1	1
Rue3-1-31	1	25176856	25176857	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25180793	25180794	1	A	core_nonrep	3	1	1
Rue3-1-31	1	25183090	25183091	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	1	25183423	25183424	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	25187065	25187066	1	T	core_nonrep	7	1	1
Rue3-1-31	1	25198267	25198268	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	25209053	25209054	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	25220048	25220049	1	G	core_nonrep	4	0.8	1
Rue3-1-31	1	25222235	25222236	1	T	core_nonrep	4	1	1
Rue3-1-31	1	25222529	25222530	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	25223183	25223184	1	G	nonrep	5	0.833333	1
Rue3-1-31	1	25224149	25224150	1	T	core_nonrep	7	1	1
Rue3-1-31	1	25224750	25224751	1	C	core_nonrep	7	1	1
Rue3-1-31	1	25231031	25231032	1	T	nonrep	3	1	1
Rue3-1-31	1	25237251	25237252	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	25237518	25237519	1	A	core_nonrep	6	1	1
Rue3-1-31	1	25249274	25249275	1	T	core_nonrep	4	1	1
Rue3-1-31	1	25249275	25249276	1	A	core_nonrep	4	1	1
Rue3-1-31	1	25269551	25269552	1	A	core_nonrep	8	1	1
Rue3-1-31	1	25279566	25279567	1	C	core_nonrep	4	0.8	1
Rue3-1-31	1	25279625	25279626	1	G	core_nonrep	3	1	1
Rue3-1-31	1	25282250	25282251	2	TC	nonrep	3	0.75	1
Rue3-1-31	1	25283793	25283794	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	25298830	25298831	1	G	core_nonrep	10	1	1
Rue3-1-31	1	25299989	25299990	1	C	core_nonrep	5	1	1
Rue3-1-31	1	25303964	25303965	1	T	core_nonrep	3	1	1
Rue3-1-31	1	25306795	25306796	1	A	core_nonrep	6	1	1.11111
Rue3-1-31	1	25324216	25324217	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	25328222	25328223	1	A	core_nonrep	8	1	1
Rue3-1-31	1	25330700	25330701	1	G	core_nonrep	8	1	1
Rue3-1-31	1	25332705	25332706	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	25338376	25338377	1	T	nonrep	3	0.75	1
Rue3-1-31	1	25339845	25339846	1	T	core_nonrep	8	1	1
Rue3-1-31	1	25340957	25340958	1	A	core_nonrep	6	1	1
Rue3-1-31	1	25341645	25341646	2	AC	core_nonrep	5	0.833333	1
Rue3-1-31	1	25352941	25352942	1	C	core_nonrep	14	1	1
Rue3-1-31	1	25358415	25358416	1	A	core_nonrep	5	1	1
Rue3-1-31	1	25365892	25365893	1	T	core_nonrep	11	1	1
Rue3-1-31	1	25369376	25369377	1	A	nonrep	4	0.8	1
Rue3-1-31	1	25375826	25375827	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	1	25378242	25378243	1	C	core_nonrep	6	1	1
Rue3-1-31	1	25383618	25383619	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25384953	25384954	1	A	core_nonrep	4	1	1
Rue3-1-31	1	25385925	25385926	1	G	core_nonrep	8	0.8	1
Rue3-1-31	1	25386355	25386356	1	A	core_nonrep	3	1	1
Rue3-1-31	1	25388996	25388997	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25392467	25392468	1	T	core_nonrep	11	0.9	1
Rue3-1-31	1	25410534	25410535	1	A	core_nonrep	3	1	1
Rue3-1-31	1	25413642	25413643	1	G	core_nonrep	13	0.8	1
Rue3-1-31	1	25414341	25414342	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25416051	25416052	2	TC	nonrep	5	0.714286	1
Rue3-1-31	1	25427001	25427002	1	T	core_nonrep	8	1	1
Rue3-1-31	1	25427072	25427073	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25431991	25431992	1	T	nonrep	3	0.75	1
Rue3-1-31	1	25432246	25432247	1	A	core_nonrep	5	1	1
Rue3-1-31	1	25436990	25436991	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	25437016	25437017	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25438312	25438313	1	T	core_nonrep	11	1	1
Rue3-1-31	1	25440199	25440200	1	C	core_nonrep	8	1	1
Rue3-1-31	1	25440876	25440877	1	G	nonrep	5	0.833333	1
Rue3-1-31	1	25440898	25440899	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25458852	25458853	1	A	core_nonrep	8	1	1
Rue3-1-31	1	25459015	25459016	2	TT	core_nonrep	8	0.75	1
Rue3-1-31	1	25459018	25459019	1	C	core_nonrep	8	1	1
Rue3-1-31	1	25459114	25459115	2	AT	core_nonrep	4	0.8	1
Rue3-1-31	1	25459240	25459241	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	1	25459252	25459253	1	T	core_nonrep	8	1	1
Rue3-1-31	1	25459272	25459273	1	A	core_nonrep	3	1	1
Rue3-1-31	1	25470827	25470828	1	T	core_nonrep	4	1	1
Rue3-1-31	1	25473799	25473800	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25519922	25519923	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25664191	25664192	1	A	core_nonrep	7	1	1
Rue3-1-31	1	25669644	25669645	1	T	core_nonrep	4	1	1
Rue3-1-31	1	25670851	25670852	1	A	core_nonrep	7	1	1
Rue3-1-31	1	25672423	25672424	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	25676574	25676575	1	G	core_nonrep	8	1	1
Rue3-1-31	1	25682903	25682904	1	A	core_nonrep	11	1	1
Rue3-1-31	1	25693179	25693180	2	AA	nonrep	7	1	1
Rue3-1-31	1	25693302	25693303	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25693813	25693814	1	T	core_nonrep	7	1	1
Rue3-1-31	1	25694496	25694497	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	25694512	25694513	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25695111	25695112	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	25695331	25695332	1	G	core_nonrep	3	1	1
Rue3-1-31	1	25697420	25697421	1	T	core_nonrep	5	1	1
Rue3-1-31	1	25699228	25699229	1	C	core_nonrep	7	1	1
Rue3-1-31	1	25699494	25699495	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	25723643	25723644	1	C	core_nonrep	11	1	1
Rue3-1-31	1	25725642	25725643	1	T	core_nonrep	14	0.857143	1
Rue3-1-31	1	25727639	25727640	1	A	core_nonrep	11	1	1
Rue3-1-31	1	25734527	25734528	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	1	25736963	25736964	1	A	core_nonrep	8	1	1
Rue3-1-31	1	25737026	25737027	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	25743676	25743677	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25743774	25743775	1	C	core_nonrep	6	1	1
Rue3-1-31	1	25745752	25745753	2	AT	core_nonrep	7	1	1
Rue3-1-31	1	25747316	25747317	1	G	core_nonrep	3	1	1
Rue3-1-31	1	25764982	25764983	1	T	core_nonrep	10	1	1
Rue3-1-31	1	25769458	25769459	2	TC	core_nonrep	4	1	1
Rue3-1-31	1	25769617	25769618	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	25779074	25779075	1	A	core_nonrep	12	0.857143	1
Rue3-1-31	1	25785095	25785096	1	C	core_nonrep	4	0.8	1.33333
Rue3-1-31	1	25790888	25790889	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	25795594	25795595	1	A	core_nonrep	9	1	1
Rue3-1-31	1	25812214	25812215	1	G	core_nonrep	16	1	1
Rue3-1-31	1	25812519	25812520	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	25813875	25813876	1	A	core_nonrep	7	1	1
Rue3-1-31	1	25815296	25815297	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	25815598	25815599	2	CT	core_nonrep	3	1	1
Rue3-1-31	1	25817452	25817453	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	25828320	25828321	1	G	core_nonrep	7	1	1
Rue3-1-31	1	25843138	25843139	1	T	core_nonrep	6	1	1
Rue3-1-31	1	25843587	25843588	1	T	core_nonrep	7	1	1
Rue3-1-31	1	25848787	25848788	1	T	core_nonrep	9	1	1
Rue3-1-31	1	25853476	25853477	1	T	core_nonrep	12	0.8	1
Rue3-1-31	1	26046373	26046374	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26046377	26046378	1	G	core_nonrep	4	1	1
Rue3-1-31	1	26046608	26046609	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	26047268	26047269	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26048869	26048870	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26048870	26048871	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	26053651	26053652	1	A	core_nonrep	6	1	1
Rue3-1-31	1	26054114	26054115	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	1	26056081	26056082	1	C	nonrep	3	1	1
Rue3-1-31	1	26057890	26057891	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	1	26062780	26062781	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	26090303	26090304	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26092219	26092220	1	T	core_nonrep	9	1	1
Rue3-1-31	1	26096061	26096062	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	26097083	26097084	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26101153	26101154	1	T	core_nonrep	5	0.8	1
Rue3-1-31	1	26102822	26102823	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26114025	26114026	1	C	core_nonrep	7	1	1
Rue3-1-31	1	26114040	26114041	1	C	core_nonrep	7	1	1
Rue3-1-31	1	26114178	26114179	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	26121659	26121660	1	A	core_nonrep	11	0.769231	1
Rue3-1-31	1	26122055	26122056	2	AA	core_nonrep	11	1	1
Rue3-1-31	1	26123810	26123811	1	C	core_nonrep	7	1	1
Rue3-1-31	1	26123861	26123862	1	A	core_nonrep	7	1	1
Rue3-1-31	1	26124865	26124866	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	26141319	26141320	1	T	nonrep	3	1	1
Rue3-1-31	1	26142852	26142853	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	26142939	26142940	1	A	core_nonrep	6	1	1
Rue3-1-31	1	26145148	26145149	1	A	nonrep	5	0.714286	1
Rue3-1-31	1	26147407	26147408	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26149326	26149327	2	GA	core_nonrep	10	1	1
Rue3-1-31	1	26149327	26149328	1	T	core_nonrep	11	1	1
Rue3-1-31	1	26151542	26151543	2	TA	core_nonrep	4	1	1
Rue3-1-31	1	26158391	26158392	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26158660	26158661	1	A	nonrep	4	0.8	1
Rue3-1-31	1	26158754	26158755	1	C	core_nonrep	6	1	1
Rue3-1-31	1	26160365	26160366	1	T	core_nonrep	9	0.9	1
Rue3-1-31	1	26160855	26160856	1	T	core_nonrep	8	1	1
Rue3-1-31	1	26163895	26163896	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26164881	26164882	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	26166897	26166898	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	26168354	26168355	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26170359	26170360	2	TG	core_nonrep	3	0.75	1
Rue3-1-31	1	26171413	26171414	1	T	core_nonrep	13	1	1
Rue3-1-31	1	26171900	26171901	2	TC	core_nonrep	8	1	1
Rue3-1-31	1	26171901	26171902	1	G	core_nonrep	8	1	1
Rue3-1-31	1	26172181	26172182	1	T	nonrep	4	1	1
Rue3-1-31	1	26177938	26177939	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26178032	26178033	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	26178729	26178730	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	26180755	26180756	1	A	nonrep	3	0.75	1
Rue3-1-31	1	26183085	26183086	1	G	core_nonrep	8	1	1
Rue3-1-31	1	26183652	26183653	1	A	core_nonrep	9	1	1
Rue3-1-31	1	26187541	26187542	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26188677	26188678	1	G	core_nonrep	5	1	1
Rue3-1-31	1	26189693	26189694	1	A	nonrep	3	1	1
Rue3-1-31	1	26190534	26190535	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	26194832	26194833	1	T	core_nonrep	9	1	1
Rue3-1-31	1	26195853	26195854	1	C	core_nonrep	5	1	1
Rue3-1-31	1	26201612	26201613	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	26201615	26201616	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	26205106	26205107	1	A	core_nonrep	13	1	1
Rue3-1-31	1	26205155	26205156	1	A	core_nonrep	16	0.857143	1
Rue3-1-31	1	26208325	26208326	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	26210941	26210942	1	A	core_nonrep	7	0.8	1
Rue3-1-31	1	26223755	26223756	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26225446	26225447	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26226050	26226051	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	1	26231976	26231977	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26232096	26232097	1	T	core_nonrep	13	1	1
Rue3-1-31	1	26232251	26232252	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	26238719	26238720	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	1	26239024	26239025	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	1	26239187	26239188	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26245102	26245103	1	A	core_nonrep	8	1	1
Rue3-1-31	1	26245491	26245492	1	C	core_nonrep	5	1	1
Rue3-1-31	1	26247000	26247001	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26247362	26247363	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	1	26247951	26247952	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26251008	26251009	1	A	core_nonrep	9	1	1
Rue3-1-31	1	26251044	26251045	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	1	26264286	26264287	1	T	nonrep	3	0.75	1
Rue3-1-31	1	26266805	26266806	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26279488	26279489	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	26280671	26280672	2	TT	core_nonrep	3	1	1
Rue3-1-31	1	26283135	26283136	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	26284307	26284308	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26286669	26286670	1	G	core_nonrep	10	1	1
Rue3-1-31	1	26288223	26288224	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	26289939	26289940	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26290687	26290688	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	26291093	26291094	1	A	core_nonrep	6	1	1
Rue3-1-31	1	26291134	26291135	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26291372	26291373	1	T	nonrep	3	0.75	1
Rue3-1-31	1	26291406	26291407	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	26320165	26320166	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	1	26326157	26326158	2	AC	core_nonrep	9	0.9	1
Rue3-1-31	1	26326158	26326159	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	1	26326893	26326894	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	26329023	26329024	2	AG	core_nonrep	6	0.714286	1
Rue3-1-31	1	26330083	26330084	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	1	26332291	26332292	1	A	core_nonrep	6	1	1
Rue3-1-31	1	26332977	26332978	1	G	core_nonrep	8	0.75	1
Rue3-1-31	1	26333594	26333595	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26365729	26365730	1	C	core_nonrep	7	1	1
Rue3-1-31	1	26365924	26365925	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26366586	26366587	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26367188	26367189	2	AA	core_nonrep	15	0.857143	1
Rue3-1-31	1	26376074	26376075	2	TT	core_nonrep	5	1	1
Rue3-1-31	1	26395988	26395989	1	A	core_nonrep	7	1	1
Rue3-1-31	1	26402904	26402905	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	26415757	26415758	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	26426519	26426520	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26432454	26432455	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26437138	26437139	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	26441687	26441688	2	GT	core_nonrep	6	0.75	1
Rue3-1-31	1	26453071	26453072	2	GC	nonrep	4	0.8	1
Rue3-1-31	1	26463193	26463194	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	26465798	26465799	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26467479	26467480	1	C	core_nonrep	10	0.7	1
Rue3-1-31	1	26474883	26474884	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	26481089	26481090	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	26483211	26483212	1	A	core_nonrep	9	1	1
Rue3-1-31	1	26485084	26485085	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26486425	26486426	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	26522266	26522267	1	A	core_nonrep	11	1	1
Rue3-1-31	1	26524334	26524335	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26525143	26525144	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26526316	26526317	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	26528721	26528722	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26531490	26531491	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26531929	26531930	1	C	core_nonrep	6	1	1
Rue3-1-31	1	26532728	26532729	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26536073	26536074	1	T	core_nonrep	11	0.875	1
Rue3-1-31	1	26538466	26538467	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	26538771	26538772	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	26539694	26539695	1	G	core_nonrep	6	1	1
Rue3-1-31	1	26540890	26540891	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	1	26546442	26546443	1	G	core_nonrep	6	1	1
Rue3-1-31	1	26548521	26548522	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	26550166	26550167	1	A	core_nonrep	15	1	1
Rue3-1-31	1	26586923	26586924	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26587218	26587219	1	T	core_nonrep	7	1	1
Rue3-1-31	1	26595255	26595256	1	A	core_nonrep	16	0.933333	1
Rue3-1-31	1	26604105	26604106	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26621520	26621521	1	A	core_nonrep	7	1	1
Rue3-1-31	1	26629845	26629846	1	G	core_nonrep	9	0.9	1
Rue3-1-31	1	26644897	26644898	1	A	core_nonrep	6	1	1
Rue3-1-31	1	26647414	26647415	1	G	core_nonrep	5	1	1
Rue3-1-31	1	26649783	26649784	1	C	core_nonrep	9	1	1
Rue3-1-31	1	26651741	26651742	1	T	core_nonrep	9	0.9	1
Rue3-1-31	1	26651759	26651760	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	1	26655006	26655007	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26655608	26655609	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	26656608	26656609	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26660140	26660141	1	G	core_nonrep	16	1	1
Rue3-1-31	1	26664900	26664901	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	26665180	26665181	1	A	core_nonrep	12	1	1
Rue3-1-31	1	26688660	26688661	1	T	core_nonrep	8	1	1
Rue3-1-31	1	26690031	26690032	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	26695341	26695342	1	A	nonrep	5	0.833333	1
Rue3-1-31	1	26695466	26695467	1	T	nonrep	3	0.75	1
Rue3-1-31	1	26698022	26698023	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	26701683	26701684	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26702057	26702058	2	AG	core_nonrep	6	1	1
Rue3-1-31	1	26703830	26703831	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26707864	26707865	1	T	core_nonrep	7	1	1
Rue3-1-31	1	26708383	26708384	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26708799	26708800	1	G	core_nonrep	7	1	1
Rue3-1-31	1	26711110	26711111	1	T	core_nonrep	10	1	1
Rue3-1-31	1	26713356	26713357	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	26728773	26728774	1	C	core_nonrep	9	1	1
Rue3-1-31	1	26731391	26731392	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26732876	26732877	1	T	core_nonrep	8	1	1
Rue3-1-31	1	26733608	26733609	1	T	core_nonrep	3	1	1
Rue3-1-31	1	26734141	26734142	1	A	core_nonrep	8	1	1
Rue3-1-31	1	26734152	26734153	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	26734404	26734405	2	TT	core_nonrep	9	1	1
Rue3-1-31	1	26737702	26737703	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	1	26741251	26741252	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	26742112	26742113	2	AG	core_nonrep	9	1	1
Rue3-1-31	1	26742718	26742719	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	26746743	26746744	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	1	26746744	26746745	2	TT	core_nonrep	8	0.888889	1
Rue3-1-31	1	26751001	26751002	2	TG	core_nonrep	4	0.75	1
Rue3-1-31	1	26761995	26761996	1	T	nonrep	4	0.8	1
Rue3-1-31	1	26767446	26767447	1	A	core_nonrep	14	0.866667	1
Rue3-1-31	1	26767817	26767818	1	T	core_nonrep	10	1	1
Rue3-1-31	1	26905948	26905949	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	26905949	26905950	1	C	core_nonrep	3	1	1
Rue3-1-31	1	26907277	26907278	1	T	core_nonrep	6	1	1
Rue3-1-31	1	26924001	26924002	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26935445	26935446	1	T	core_nonrep	7	1	1
Rue3-1-31	1	26935572	26935573	2	AC	core_nonrep	5	1	1
Rue3-1-31	1	26939197	26939198	1	A	core_nonrep	9	0.875	1
Rue3-1-31	1	26955240	26955241	1	G	core_nonrep	7	1	1
Rue3-1-31	1	26962978	26962979	1	A	core_nonrep	5	1	1
Rue3-1-31	1	26963240	26963241	1	C	core_nonrep	10	0.875	1
Rue3-1-31	1	26963351	26963352	1	G	core_nonrep	4	1	1
Rue3-1-31	1	26964111	26964112	1	A	core_nonrep	3	1	1
Rue3-1-31	1	26965137	26965138	1	A	core_nonrep	4	1	1
Rue3-1-31	1	26965139	26965140	2	CT	core_nonrep	4	1	1
Rue3-1-31	1	26965652	26965653	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26965656	26965657	1	C	core_nonrep	4	1	1
Rue3-1-31	1	26967078	26967079	1	T	core_nonrep	4	1	1
Rue3-1-31	1	26967269	26967270	1	G	core_nonrep	7	0.875	1
Rue3-1-31	1	26967730	26967731	1	G	core_nonrep	5	0.8	1
Rue3-1-31	1	26974584	26974585	1	C	nonrep	6	0.857143	1
Rue3-1-31	1	26984841	26984842	1	T	core_nonrep	5	1	1
Rue3-1-31	1	26984844	26984845	1	G	core_nonrep	5	0.75	1
Rue3-1-31	1	26985774	26985775	1	G	core_nonrep	5	1	1
Rue3-1-31	1	26985875	26985876	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27004254	27004255	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	27021494	27021495	1	T	core_nonrep	5	1	1
Rue3-1-31	1	27046698	27046699	1	T	core_nonrep	7	1	1
Rue3-1-31	1	27049002	27049003	1	T	core_nonrep	3	1	1
Rue3-1-31	1	27062110	27062111	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	1	27068515	27068516	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27069668	27069669	1	G	core_nonrep	3	1	1
Rue3-1-31	1	27070437	27070438	1	A	core_nonrep	7	1	1
Rue3-1-31	1	27070462	27070463	2	AC	core_nonrep	4	1	1
Rue3-1-31	1	27077906	27077907	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27078122	27078123	1	A	core_nonrep	9	1	1
Rue3-1-31	1	27081677	27081678	1	T	core_nonrep	5	1	1
Rue3-1-31	1	27088152	27088153	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27089997	27089998	1	A	core_nonrep	4	1	1
Rue3-1-31	1	27100081	27100082	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	1	27100082	27100083	1	C	core_nonrep	5	0.8	1
Rue3-1-31	1	27100846	27100847	1	T	core_nonrep	3	1	1
Rue3-1-31	1	27112924	27112925	1	G	core_nonrep	6	1	1
Rue3-1-31	1	27114007	27114008	1	A	core_nonrep	10	1	1
Rue3-1-31	1	27118280	27118281	1	T	core_nonrep	7	1	1
Rue3-1-31	1	27121089	27121090	1	A	core_nonrep	10	1	1.1
Rue3-1-31	1	27135104	27135105	2	GC	core_nonrep	6	0.857143	1
Rue3-1-31	1	27137630	27137631	1	T	core_nonrep	11	1	1
Rue3-1-31	1	27150825	27150826	1	T	core_nonrep	3	1	1
Rue3-1-31	1	27153589	27153590	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27178042	27178043	3	ATT	core_nonrep	6	1	1
Rue3-1-31	1	27178280	27178281	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	1	27178281	27178282	1	G	core_nonrep	8	1	1
Rue3-1-31	1	27179490	27179491	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27191444	27191445	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27195329	27195330	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	27195753	27195754	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	27195953	27195954	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27196653	27196654	2	TG	core_nonrep	14	1	1
Rue3-1-31	1	27201846	27201847	1	C	core_nonrep	14	0.923077	1
Rue3-1-31	1	27201848	27201849	1	G	core_nonrep	14	0.866667	1
Rue3-1-31	1	27207543	27207544	3	AAT	core_nonrep	10	0.769231	1
Rue3-1-31	1	27311500	27311501	1	C	core_nonrep	3	1	1
Rue3-1-31	1	27317738	27317739	1	G	core_nonrep	4	1	1
Rue3-1-31	1	27327636	27327637	2	GT	core_nonrep	6	0.857143	1
Rue3-1-31	1	27328313	27328314	2	GT	core_nonrep	12	0.846154	1
Rue3-1-31	1	27338988	27338989	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	27345560	27345561	1	T	core_nonrep	5	1	1
Rue3-1-31	1	27346618	27346619	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27367459	27367460	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	27380999	27381000	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27392139	27392140	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	1	27392287	27392288	1	G	nonrep	4	0.8	1
Rue3-1-31	1	27392411	27392412	1	A	core_nonrep	8	1	1
Rue3-1-31	1	27392506	27392507	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27392588	27392589	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27392616	27392617	1	A	nonrep	6	1	1
Rue3-1-31	1	27396150	27396151	1	C	core_nonrep	22	0.857143	1
Rue3-1-31	1	27396755	27396756	1	T	core_nonrep	5	1	1
Rue3-1-31	1	27397215	27397216	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	27400380	27400381	1	A	nonrep	3	0.75	1
Rue3-1-31	1	27400381	27400382	1	T	nonrep	3	0.75	1
Rue3-1-31	1	27400672	27400673	1	C	core_nonrep	5	1	1
Rue3-1-31	1	27406705	27406706	3	GAG	core_nonrep	14	0.733333	1
Rue3-1-31	1	27406915	27406916	1	T	core_nonrep	3	1	1
Rue3-1-31	1	27408442	27408443	1	T	core_nonrep	9	1	1
Rue3-1-31	1	27410046	27410047	1	A	core_nonrep	8	1	1
Rue3-1-31	1	27410051	27410052	1	A	core_nonrep	8	1	1
Rue3-1-31	1	27411283	27411284	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	27411421	27411422	1	G	core_nonrep	15	1	1
Rue3-1-31	1	27412108	27412109	1	T	core_nonrep	5	1	1
Rue3-1-31	1	27412231	27412232	1	T	core_nonrep	9	1	1
Rue3-1-31	1	27427719	27427720	1	A	core_nonrep	4	1	1
Rue3-1-31	1	27427721	27427722	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27430822	27430823	1	T	core_nonrep	6	1	1
Rue3-1-31	1	27430826	27430827	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27430920	27430921	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27431207	27431208	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27431461	27431462	1	T	nonrep	3	1	1
Rue3-1-31	1	27433150	27433151	1	A	core_nonrep	4	1	1
Rue3-1-31	1	27433259	27433260	1	C	nonrep	3	0.75	1
Rue3-1-31	1	27435488	27435489	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	27443623	27443624	1	T	core_nonrep	8	0.75	1
Rue3-1-31	1	27444860	27444861	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	27452560	27452561	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	27475214	27475215	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	27515231	27515232	1	A	core_nonrep	4	1	1
Rue3-1-31	1	27529513	27529514	1	C	nonrep	11	0.785714	1
Rue3-1-31	1	27534630	27534631	1	A	nonrep	3	1	1
Rue3-1-31	1	27548760	27548761	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	27550253	27550254	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	27550632	27550633	1	T	core_nonrep	3	1	1
Rue3-1-31	1	27551849	27551850	1	T	nonrep	4	0.8	1
Rue3-1-31	1	27554791	27554792	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	27554792	27554793	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27554793	27554794	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27555183	27555184	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	27572539	27572540	1	A	core_nonrep	14	1	1
Rue3-1-31	1	27581268	27581269	1	T	nonrep	4	1	1
Rue3-1-31	1	27581472	27581473	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	27581476	27581477	1	G	core_nonrep	6	1	1
Rue3-1-31	1	27583171	27583172	1	A	core_nonrep	9	1	1
Rue3-1-31	1	27585486	27585487	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	27587533	27587534	2	AG	core_nonrep	6	0.8	1
Rue3-1-31	1	27595351	27595352	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	27596235	27596236	1	C	core_nonrep	6	1	1
Rue3-1-31	1	27597509	27597510	1	G	core_nonrep	9	0.692308	1
Rue3-1-31	1	27598443	27598444	1	A	core_nonrep	10	1	1
Rue3-1-31	1	27604297	27604298	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	1	27612613	27612614	1	T	nonrep	4	0.8	1
Rue3-1-31	1	27615845	27615846	2	GG	core_nonrep	3	1	1
Rue3-1-31	1	27622978	27622979	1	C	core_nonrep	3	1	1
Rue3-1-31	1	27636964	27636965	1	G	nonrep	3	1	1
Rue3-1-31	1	27641480	27641481	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27642400	27642401	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	27647190	27647191	1	A	nonrep	5	1	1
Rue3-1-31	1	27649419	27649420	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	1	27659982	27659983	1	C	core_nonrep	9	1	1
Rue3-1-31	1	27660443	27660444	1	G	core_nonrep	12	1	1
Rue3-1-31	1	27672279	27672280	1	T	core_nonrep	6	1	1
Rue3-1-31	1	27672834	27672835	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27675634	27675635	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27705402	27705403	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27706191	27706192	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	1	27708119	27708120	1	A	core_nonrep	9	1	1
Rue3-1-31	1	27708120	27708121	2	GT	core_nonrep	9	1	1
Rue3-1-31	1	27711645	27711646	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	27713891	27713892	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	1	27714819	27714820	1	C	core_nonrep	5	1	1
Rue3-1-31	1	27714984	27714985	1	A	core_nonrep	5	1	1
Rue3-1-31	1	27715117	27715118	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	1	27716503	27716504	1	C	core_nonrep	5	1	1
Rue3-1-31	1	27718202	27718203	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	1	27721202	27721203	1	G	core_nonrep	19	1	1
Rue3-1-31	1	27739333	27739334	1	G	core_nonrep	3	1	1
Rue3-1-31	1	27741296	27741297	1	T	core_nonrep	16	0.866667	1
Rue3-1-31	1	27741297	27741298	1	G	core_nonrep	17	0.933333	1
Rue3-1-31	1	27742023	27742024	1	C	core_nonrep	14	0.833333	1
Rue3-1-31	1	27746694	27746695	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	27749188	27749189	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	1	27750853	27750854	1	T	nonrep	3	1	1
Rue3-1-31	1	27765674	27765675	1	A	core_nonrep	3	1	1
Rue3-1-31	1	27768340	27768341	1	T	core_nonrep	4	1	1
Rue3-1-31	1	27768342	27768343	2	GG	core_nonrep	6	0.75	1
Rue3-1-31	1	27780284	27780285	1	A	core_nonrep	11	1	1
Rue3-1-31	1	27785423	27785424	1	T	core_nonrep	9	1	1
Rue3-1-31	1	27792631	27792632	1	G	core_nonrep	5	1	1
Rue3-1-31	1	27792870	27792871	2	NN	core_nonrep	3	0.75	1
Rue3-1-31	1	27818301	27818302	1	G	core_nonrep	4	1	1
Rue3-1-31	1	27834800	27834801	1	T	core_nonrep	8	1	1
Rue3-1-31	1	27860261	27860262	1	C	core_nonrep	9	0.777778	1
Rue3-1-31	1	27860262	27860263	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	1	27861510	27861511	1	C	core_nonrep	3	1	1
Rue3-1-31	1	27862220	27862221	1	T	nonrep	3	0.75	1
Rue3-1-31	1	27862221	27862222	2	CA	nonrep	3	0.75	1
Rue3-1-31	1	27887929	27887930	1	C	core_nonrep	5	1	1
Rue3-1-31	1	27900216	27900217	2	AA	core_nonrep	7	0.714286	1
Rue3-1-31	1	27903976	27903977	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27904152	27904153	1	A	core_nonrep	11	1	1
Rue3-1-31	1	27904535	27904536	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	27905076	27905077	2	AA	core_nonrep	5	1	1
Rue3-1-31	1	27905232	27905233	1	A	core_nonrep	8	1	1
Rue3-1-31	1	27905591	27905592	1	T	core_nonrep	8	1	1
Rue3-1-31	1	27905593	27905594	2	GC	core_nonrep	8	1	1
Rue3-1-31	1	27910719	27910720	1	G	core_nonrep	14	0.846154	1
Rue3-1-31	1	27910763	27910764	1	G	core_nonrep	21	0.941176	1
Rue3-1-31	1	27911215	27911216	1	C	core_nonrep	6	1	1
Rue3-1-31	1	27912696	27912697	2	CA	core_nonrep	18	1	1
Rue3-1-31	1	27912832	27912833	1	A	core_nonrep	11	1	1
Rue3-1-31	1	27942063	27942064	1	T	core_nonrep	12	1	1
Rue3-1-31	1	27944193	27944194	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	27944456	27944457	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	1	27947119	27947120	1	T	core_nonrep	11	1	1
Rue3-1-31	1	27947658	27947659	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	1	27948651	27948652	1	T	core_nonrep	7	1	1
Rue3-1-31	1	27951795	27951796	2	TC	core_nonrep	5	0.833333	1
Rue3-1-31	1	27973998	27973999	1	G	core_nonrep	4	1	1
Rue3-1-31	1	27976671	27976672	1	C	core_nonrep	8	1	1
Rue3-1-31	1	27977343	27977344	1	A	core_nonrep	6	1	1
Rue3-1-31	1	27982876	27982877	1	C	core_nonrep	9	0.75	1
Rue3-1-31	1	27982877	27982878	2	TT	core_nonrep	10	0.75	1
Rue3-1-31	1	27985008	27985009	1	G	core_nonrep	5	1	1
Rue3-1-31	1	27986002	27986003	1	T	core_nonrep	6	1	1
Rue3-1-31	1	27992596	27992597	1	G	core_nonrep	10	1	1
Rue3-1-31	1	27998838	27998839	1	T	core_nonrep	9	1	1
Rue3-1-31	1	28033716	28033717	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	1	28038480	28038481	1	T	core_nonrep	5	1	1
Rue3-1-31	1	28038532	28038533	1	A	core_nonrep	7	1	1
Rue3-1-31	1	28049669	28049670	1	T	core_nonrep	5	1	1
Rue3-1-31	1	28058384	28058385	1	A	core_nonrep	4	1	1
Rue3-1-31	1	28059390	28059391	1	A	nonrep	3	0.75	1
Rue3-1-31	1	28082340	28082341	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	28083721	28083722	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	1	28085128	28085129	1	A	core_nonrep	15	1	1
Rue3-1-31	1	28086171	28086172	1	A	core_nonrep	11	1	1
Rue3-1-31	1	28087211	28087212	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	28105626	28105627	1	C	core_nonrep	7	1	1
Rue3-1-31	1	28108659	28108660	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	28110210	28110211	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	28112305	28112306	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	1	28114473	28114474	1	T	core_nonrep	10	0.75	1
Rue3-1-31	1	28134880	28134881	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	28135598	28135599	1	T	core_nonrep	7	1	1
Rue3-1-31	1	28136045	28136046	1	C	core_nonrep	5	1	1
Rue3-1-31	1	28149665	28149666	1	T	core_nonrep	3	1	1
Rue3-1-31	1	28151893	28151894	1	T	core_nonrep	10	1	1
Rue3-1-31	1	28155435	28155436	1	A	core_nonrep	8	1	1
Rue3-1-31	1	28171034	28171035	1	T	core_nonrep	5	1	1
Rue3-1-31	1	28175171	28175172	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	28181703	28181704	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	1	28186375	28186376	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	1	28186376	28186377	1	C	core_nonrep	4	1	1
Rue3-1-31	1	28192861	28192862	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	28201759	28201760	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	28208826	28208827	2	TC	core_nonrep	9	1	1
Rue3-1-31	1	28222585	28222586	1	T	core_nonrep	9	1	1
Rue3-1-31	1	28222775	28222776	1	T	core_nonrep	6	1	1
Rue3-1-31	1	28243691	28243692	1	A	nonrep	6	0.857143	1
Rue3-1-31	1	28244946	28244947	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	1	28246887	28246888	1	A	core_nonrep	4	1	1
Rue3-1-31	1	28261431	28261432	1	A	core_nonrep	4	1	1
Rue3-1-31	1	28277684	28277685	3	TGA	core_nonrep	12	0.833333	1
Rue3-1-31	1	28289518	28289519	1	A	core_nonrep	4	1	1
Rue3-1-31	1	28292485	28292486	2	TA	nonrep	3	1	1
Rue3-1-31	1	28294454	28294455	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	28299552	28299553	1	A	core_nonrep	7	0.875	1
Rue3-1-31	1	28305884	28305885	1	G	core_nonrep	5	1	1
Rue3-1-31	1	28311713	28311714	1	A	core_nonrep	10	0.875	1
Rue3-1-31	1	28311715	28311716	1	T	core_nonrep	10	0.777778	1
Rue3-1-31	1	28319658	28319659	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	28338861	28338862	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	28350074	28350075	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	28357307	28357308	1	G	core_nonrep	6	0.75	1
Rue3-1-31	1	28372803	28372804	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	28377999	28378000	2	AT	core_nonrep	3	1	1
Rue3-1-31	1	28378109	28378110	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	28378287	28378288	1	C	core_nonrep	4	1	1
Rue3-1-31	1	28402373	28402374	1	G	core_nonrep	4	1	1
Rue3-1-31	1	28453327	28453328	1	G	core_nonrep	4	0.75	1
Rue3-1-31	1	28458615	28458616	1	T	core_nonrep	4	1	1
Rue3-1-31	1	28461937	28461938	1	A	core_nonrep	3	1	1
Rue3-1-31	1	28471683	28471684	1	A	core_nonrep	3	1	1
Rue3-1-31	1	28492856	28492857	2	TT	core_nonrep	4	1	1
Rue3-1-31	1	28496267	28496268	1	A	core_nonrep	6	1	1
Rue3-1-31	1	28546645	28546646	1	T	core_nonrep	28	0.954545	1
Rue3-1-31	1	28550744	28550745	1	C	core_nonrep	8	1	1
Rue3-1-31	1	28570527	28570528	1	A	core_nonrep	4	1	1
Rue3-1-31	1	28575539	28575540	2	AA	core_nonrep	7	1	1
Rue3-1-31	1	28585370	28585371	1	T	core_nonrep	4	1	1
Rue3-1-31	1	28611175	28611176	1	G	core_nonrep	10	0.857143	1
Rue3-1-31	1	28614165	28614166	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	28627690	28627691	1	A	core_nonrep	7	1	1
Rue3-1-31	1	28655332	28655333	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	28670467	28670468	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	28675597	28675598	1	C	core_nonrep	7	1	1
Rue3-1-31	1	28695589	28695590	1	T	core_nonrep	12	1	1
Rue3-1-31	1	28696423	28696424	1	C	core_nonrep	5	0.8	1
Rue3-1-31	1	28700063	28700064	1	T	core_nonrep	5	1	1
Rue3-1-31	1	28700265	28700266	1	A	core_nonrep	7	1	1
Rue3-1-31	1	28700540	28700541	1	A	core_nonrep	3	1	1
Rue3-1-31	1	28700541	28700542	2	TC	core_nonrep	3	1	1
Rue3-1-31	1	28700648	28700649	1	A	core_nonrep	6	1	1
Rue3-1-31	1	28700677	28700678	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	28706362	28706363	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	28706388	28706389	1	A	core_nonrep	6	1	1
Rue3-1-31	1	28707837	28707838	1	G	core_nonrep	3	1	1
Rue3-1-31	1	28714194	28714195	1	A	core_nonrep	6	1	1
Rue3-1-31	1	28719031	28719032	1	T	core_nonrep	6	0.8	1
Rue3-1-31	1	28724114	28724115	1	C	core_nonrep	7	1	1
Rue3-1-31	1	28726933	28726934	2	GA	core_nonrep	12	1	1
Rue3-1-31	1	28731331	28731332	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	1	28733025	28733026	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	28736271	28736272	2	CT	core_nonrep	3	1	1
Rue3-1-31	1	28739187	28739188	1	A	core_nonrep	3	1	1
Rue3-1-31	1	28750170	28750171	2	TA	nonrep	3	0.75	1
Rue3-1-31	1	28755901	28755902	2	TT	core_nonrep	7	1	1
Rue3-1-31	1	28757073	28757074	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	28766686	28766687	1	T	core_nonrep	12	1	1
Rue3-1-31	1	28772362	28772363	1	T	core_nonrep	8	1	1
Rue3-1-31	1	28772415	28772416	1	A	core_nonrep	5	1	1
Rue3-1-31	1	28772676	28772677	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	1	28777286	28777287	1	C	core_nonrep	6	1	1
Rue3-1-31	1	28788324	28788325	1	T	core_nonrep	4	1	1
Rue3-1-31	1	28804886	28804887	1	A	core_nonrep	6	1	1
Rue3-1-31	1	28805331	28805332	1	C	core_nonrep	12	1	1
Rue3-1-31	1	28817931	28817932	1	A	core_nonrep	12	0.818182	1
Rue3-1-31	1	28818145	28818146	1	G	core_nonrep	15	1	1
Rue3-1-31	1	28821372	28821373	1	T	core_nonrep	5	1	1
Rue3-1-31	1	28821413	28821414	1	A	core_nonrep	4	0.75	1
Rue3-1-31	1	28832246	28832247	1	C	core_nonrep	3	1	1
Rue3-1-31	1	28834200	28834201	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	1	28850091	28850092	2	AG	core_nonrep	11	0.909091	1
Rue3-1-31	1	28852835	28852836	1	A	core_nonrep	14	1	1
Rue3-1-31	1	28857078	28857079	1	T	core_nonrep	6	0.75	1
Rue3-1-31	1	28865395	28865396	1	A	nonrep	3	0.75	1
Rue3-1-31	1	28865810	28865811	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	1	28876283	28876284	1	T	core_nonrep	3	1	1
Rue3-1-31	1	28876287	28876288	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	28877193	28877194	1	A	core_nonrep	3	1	1
Rue3-1-31	1	28877337	28877338	1	A	core_nonrep	3	0.75	1
Rue3-1-31	1	28881937	28881938	1	T	core_nonrep	3	1	1
Rue3-1-31	1	28893565	28893566	2	AA	core_nonrep	4	1	1
Rue3-1-31	1	28899997	28899998	1	T	core_nonrep	12	0.75	1
Rue3-1-31	1	29076538	29076539	1	A	core_nonrep	12	1	1
Rue3-1-31	1	29090370	29090371	1	T	core_nonrep	7	1	1
Rue3-1-31	1	29096523	29096524	1	A	core_nonrep	10	0.692308	1
Rue3-1-31	1	29097511	29097512	1	A	core_nonrep	4	1	1
Rue3-1-31	1	29098243	29098244	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	1	29109239	29109240	1	C	core_nonrep	6	1	1
Rue3-1-31	1	29128307	29128308	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29135052	29135053	1	G	core_nonrep	9	0.875	1
Rue3-1-31	1	29135079	29135080	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29137590	29137591	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29139445	29139446	1	T	core_nonrep	4	0.8	1
Rue3-1-31	1	29142373	29142374	2	GT	nonrep	3	1	1
Rue3-1-31	1	29142374	29142375	1	T	core_nonrep	3	1	1
Rue3-1-31	1	29142736	29142737	2	AC	core_nonrep	8	0.8	1
Rue3-1-31	1	29143576	29143577	1	A	core_nonrep	11	0.818182	1
Rue3-1-31	1	29147319	29147320	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	1	29147320	29147321	2	TT	core_nonrep	12	0.909091	1
Rue3-1-31	1	29147925	29147926	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29147960	29147961	1	A	core_nonrep	5	1	1
Rue3-1-31	1	29154541	29154542	1	A	core_nonrep	11	1	1
Rue3-1-31	1	29154972	29154973	1	T	core_nonrep	17	0.866667	1
Rue3-1-31	1	29163556	29163557	1	A	core_nonrep	10	1	1
Rue3-1-31	1	29167359	29167360	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29167479	29167480	1	T	core_nonrep	5	0.75	1
Rue3-1-31	1	29168249	29168250	1	G	nonrep	3	1	1
Rue3-1-31	1	29169038	29169039	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29175927	29175928	1	A	core_nonrep	19	0.9375	1
Rue3-1-31	1	29188318	29188319	1	T	core_nonrep	3	1	1
Rue3-1-31	1	29190874	29190875	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	1	29211574	29211575	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	1	29211887	29211888	1	A	core_nonrep	13	1	1
Rue3-1-31	1	29212203	29212204	1	T	core_nonrep	8	1	1
Rue3-1-31	1	29212216	29212217	1	T	core_nonrep	4	0.75	1
Rue3-1-31	1	29212647	29212648	1	A	core_nonrep	10	0.8	1
Rue3-1-31	1	29212648	29212649	1	C	core_nonrep	10	0.9	1
Rue3-1-31	1	29213670	29213671	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	1	29213671	29213672	1	A	core_nonrep	6	1	1
Rue3-1-31	1	29219170	29219171	1	C	core_nonrep	5	1	1
Rue3-1-31	1	29221238	29221239	2	TT	core_nonrep	9	0.875	1
Rue3-1-31	1	29221484	29221485	1	A	nonrep	3	1	1
Rue3-1-31	1	29226889	29226890	1	C	core_nonrep	10	0.75	1
Rue3-1-31	1	29234490	29234491	3	GAA	core_nonrep	3	0.75	1
Rue3-1-31	1	29236139	29236140	1	A	core_nonrep	7	1	1
Rue3-1-31	1	29244921	29244922	1	A	nonrep	3	0.75	1
Rue3-1-31	1	29244924	29244925	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29245192	29245193	1	A	core_nonrep	4	1	1
Rue3-1-31	1	29247159	29247160	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	1	29249636	29249637	1	A	core_nonrep	5	1	1
Rue3-1-31	1	29254791	29254792	1	T	core_nonrep	6	1	1
Rue3-1-31	1	29268181	29268182	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29289607	29289608	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29290205	29290206	1	C	nonrep	7	0.777778	1
Rue3-1-31	1	29293253	29293254	1	A	core_nonrep	8	1	1
Rue3-1-31	1	29300138	29300139	1	A	nonrep	5	1	1
Rue3-1-31	1	29301393	29301394	1	A	core_nonrep	8	1	1
Rue3-1-31	1	29310543	29310544	1	T	core_nonrep	3	1	1
Rue3-1-31	1	29310607	29310608	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	29317764	29317765	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	1	29318333	29318334	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29320278	29320279	1	T	core_nonrep	11	1	1
Rue3-1-31	1	29323481	29323482	1	G	core_nonrep	3	0.75	1
Rue3-1-31	1	29324152	29324153	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	29329024	29329025	1	C	core_nonrep	7	1	1
Rue3-1-31	1	29331455	29331456	1	T	core_nonrep	7	0.75	1
Rue3-1-31	1	29359215	29359216	2	TT	core_nonrep	8	0.857143	1
Rue3-1-31	1	29362269	29362270	1	T	core_nonrep	7	1	1
Rue3-1-31	1	29365157	29365158	1	A	core_nonrep	8	1	1
Rue3-1-31	1	29368731	29368732	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29369241	29369242	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	1	29372891	29372892	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29387923	29387924	1	C	core_nonrep	5	1	1
Rue3-1-31	1	29388630	29388631	1	G	core_nonrep	7	1	1
Rue3-1-31	1	29390887	29390888	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	1	29390932	29390933	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	1	29391078	29391079	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	1	29391080	29391081	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	1	29401545	29401546	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29406260	29406261	1	T	core_nonrep	12	1	1
Rue3-1-31	1	29408920	29408921	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	1	29408922	29408923	2	GA	core_nonrep	8	0.875	1
Rue3-1-31	1	29418042	29418043	1	A	core_nonrep	7	1	1
Rue3-1-31	1	29427472	29427473	2	CT	core_nonrep	9	0.875	1
Rue3-1-31	1	29429693	29429694	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29430099	29430100	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	29430843	29430844	1	A	nonrep	3	1	1
Rue3-1-31	1	29444493	29444494	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29444534	29444535	1	T	core_nonrep	8	1	1
Rue3-1-31	1	29444640	29444641	3	AAG	core_nonrep	3	1	1
Rue3-1-31	1	29453321	29453322	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	29476619	29476620	1	T	core_nonrep	7	1	1
Rue3-1-31	1	29493685	29493686	1	A	core_nonrep	6	1	1
Rue3-1-31	1	29494610	29494611	1	A	core_nonrep	5	0.75	1
Rue3-1-31	1	29500824	29500825	1	A	core_nonrep	8	1	1
Rue3-1-31	1	29505228	29505229	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	29505865	29505866	1	A	core_nonrep	5	1	1
Rue3-1-31	1	29507966	29507967	1	A	core_nonrep	7	1	1
Rue3-1-31	1	29509054	29509055	1	C	core_nonrep	3	1	1
Rue3-1-31	1	29514322	29514323	1	T	core_nonrep	12	1	1
Rue3-1-31	1	29549253	29549254	1	A	core_nonrep	11	0.9	1
Rue3-1-31	1	29554263	29554264	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	1	29570510	29570511	1	C	core_nonrep	6	0.75	1
Rue3-1-31	1	29572541	29572542	1	T	core_nonrep	6	1	1
Rue3-1-31	1	29585585	29585586	3	AAC	core_nonrep	17	0.944444	1
Rue3-1-31	1	29585759	29585760	1	C	core_nonrep	3	1	1
Rue3-1-31	1	29589428	29589429	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	1	29590510	29590511	1	A	core_nonrep	4	1	1
Rue3-1-31	1	29591235	29591236	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29592201	29592202	1	C	core_nonrep	8	1	1
Rue3-1-31	1	29594773	29594774	1	C	core_nonrep	5	0.75	1
Rue3-1-31	1	29613129	29613130	1	G	core_nonrep	11	0.9	1
Rue3-1-31	1	29636913	29636914	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29637901	29637902	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29641721	29641722	1	T	core_nonrep	11	1	1
Rue3-1-31	1	29650989	29650990	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	29665899	29665900	1	T	core_nonrep	18	1	1
Rue3-1-31	1	29701571	29701572	2	TA	core_nonrep	9	1	1
Rue3-1-31	1	29701895	29701896	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	1	29709917	29709918	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	1	29751494	29751495	1	T	nonrep	5	1	1
Rue3-1-31	1	29762578	29762579	1	T	nonrep	3	0.75	1
Rue3-1-31	1	29776835	29776836	1	G	core_nonrep	5	1	1
Rue3-1-31	1	29777002	29777003	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29778110	29778111	1	A	core_nonrep	6	1	1
Rue3-1-31	1	29779059	29779060	1	A	core_nonrep	9	1	1
Rue3-1-31	1	29782242	29782243	1	A	core_nonrep	8	1	1
Rue3-1-31	1	29783190	29783191	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	29783748	29783749	1	C	core_nonrep	6	1	1
Rue3-1-31	1	29794181	29794182	1	A	core_nonrep	6	1	1
Rue3-1-31	1	29803565	29803566	3	AAC	core_nonrep	5	0.833333	1
Rue3-1-31	1	29810454	29810455	1	T	core_nonrep	9	0.875	1
Rue3-1-31	1	29810455	29810456	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	1	29814378	29814379	1	A	core_nonrep	6	1	1
Rue3-1-31	1	29821110	29821111	1	C	core_nonrep	8	1	1
Rue3-1-31	1	29842811	29842812	1	A	core_nonrep	7	1	1
Rue3-1-31	1	29858662	29858663	1	A	core_nonrep	5	1	1
Rue3-1-31	1	29884795	29884796	1	T	core_nonrep	4	1	1
Rue3-1-31	1	29894948	29894949	1	T	core_nonrep	8	1	1
Rue3-1-31	1	29904640	29904641	1	A	core_nonrep	4	1	1
Rue3-1-31	1	29905371	29905372	1	C	nonrep	4	1	1
Rue3-1-31	1	29908741	29908742	1	T	core_nonrep	5	1	1
Rue3-1-31	1	29915658	29915659	1	T	nonrep	3	1	1
Rue3-1-31	1	29917102	29917103	1	A	core_nonrep	3	1	1
Rue3-1-31	1	29942720	29942721	1	T	core_nonrep	12	1	1
Rue3-1-31	1	29943650	29943651	1	C	core_nonrep	6	0.8	1
Rue3-1-31	1	30018870	30018871	1	C	core_nonrep	9	1	1
Rue3-1-31	1	30019839	30019840	2	AT	core_nonrep	4	1	1
Rue3-1-31	1	30024280	30024281	1	A	core_nonrep	4	1	1
Rue3-1-31	1	30032097	30032098	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	1	30058102	30058103	1	A	core_nonrep	8	1	1
Rue3-1-31	1	30064041	30064042	1	G	core_nonrep	13	0.833333	1
Rue3-1-31	1	30064675	30064676	1	C	core_nonrep	5	1	1
Rue3-1-31	1	30072220	30072221	1	A	core_nonrep	6	1	1
Rue3-1-31	1	30075584	30075585	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	30075709	30075710	1	A	core_nonrep	10	1	1
Rue3-1-31	1	30077081	30077082	1	A	core_nonrep	15	0.9	1
Rue3-1-31	1	30093963	30093964	2	CT	core_nonrep	5	0.833333	1
Rue3-1-31	1	30100908	30100909	1	A	core_nonrep	13	1	1
Rue3-1-31	1	30105466	30105467	1	T	core_nonrep	9	1	1
Rue3-1-31	1	30140023	30140024	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	30143428	30143429	1	A	core_nonrep	7	1	1
Rue3-1-31	1	30143981	30143982	1	T	core_nonrep	11	0.846154	1
Rue3-1-31	1	30151891	30151892	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	1	30156919	30156920	1	G	core_nonrep	13	1	1
Rue3-1-31	1	30163688	30163689	2	AT	core_nonrep	5	1	1
Rue3-1-31	1	30163838	30163839	1	T	core_nonrep	3	0.75	1
Rue3-1-31	1	30167158	30167159	1	T	core_nonrep	4	1	1
Rue3-1-31	1	30170219	30170220	1	T	nonrep	13	0.8125	1
Rue3-1-31	1	30171536	30171537	1	T	nonrep	5	0.833333	1
Rue3-1-31	1	30179418	30179419	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	1	30188448	30188449	2	TA	core_nonrep	5	1	1
Rue3-1-31	1	30195617	30195618	1	A	core_nonrep	7	0.75	1
Rue3-1-31	1	30208201	30208202	1	A	core_nonrep	12	1	1
Rue3-1-31	1	30209621	30209622	2	TT	core_nonrep	5	0.75	1
Rue3-1-31	1	30210005	30210006	1	A	core_nonrep	10	1	1
Rue3-1-31	1	30211523	30211524	1	A	core_nonrep	12	1	1
Rue3-1-31	1	30213424	30213425	1	T	core_nonrep	4	1	1
Rue3-1-31	1	30213597	30213598	1	C	nonrep	3	0.75	1
Rue3-1-31	1	30224933	30224934	1	T	core_nonrep	7	1	1
Rue3-1-31	1	30229279	30229280	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	1	30229664	30229665	1	C	nonrep	4	0.8	1
Rue3-1-31	1	30240225	30240226	1	A	core_nonrep	4	1	1
Rue3-1-31	1	30275071	30275072	2	TT	core_nonrep	6	1	1
Rue3-1-31	1	30275734	30275735	1	G	core_nonrep	7	1	1
Rue3-1-31	1	30276625	30276626	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	1	30276659	30276660	1	T	core_nonrep	8	1	1
Rue3-1-31	1	30298020	30298021	2	AG	core_nonrep	5	1	1
Rue3-1-31	1	30299263	30299264	1	T	nonrep	3	1	1
Rue3-1-31	1	30299428	30299429	1	A	core_nonrep	5	0.8	1
Rue3-1-31	1	30299464	30299465	1	T	core_nonrep	8	0.875	1
Rue3-1-31	1	30302797	30302798	1	C	core_nonrep	12	1	1
Rue3-1-31	1	30302939	30302940	1	T	core_nonrep	8	1	1
Rue3-1-31	1	30302941	30302942	1	G	core_nonrep	10	0.8	1
Rue3-1-31	1	30304919	30304920	1	C	core_nonrep	9	1	1
Rue3-1-31	1	30308388	30308389	1	A	core_nonrep	12	0.8	1
Rue3-1-31	1	30319393	30319394	1	T	core_nonrep	3	1	1
Rue3-1-31	1	30338862	30338863	3	TTA	core_nonrep	7	0.777778	1
Rue3-1-31	1	30345241	30345242	1	A	core_nonrep	4	0.8	1
Rue3-1-31	1	30351798	30351799	1	C	core_nonrep	9	1	1
Rue3-1-31	1	30352218	30352219	1	T	core_nonrep	7	1	1
Rue3-1-31	1	30353308	30353309	1	A	nonrep	8	0.727273	1
Rue3-1-31	1	30370659	30370660	1	T	core_nonrep	10	1	1
Rue3-1-31	1	30373651	30373652	1	G	core_nonrep	10	0.7	1
Rue3-1-31	1	30385749	30385750	1	A	core_nonrep	8	0.875	1
Rue3-1-31	1	30394720	30394721	1	T	core_nonrep	15	1	1
Rue3-1-31	1	30395376	30395377	1	T	core_nonrep	5	1	1
Rue3-1-31	1	30402834	30402835	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	1	30405151	30405152	1	T	core_nonrep	5	1	1
Rue3-1-31	1	30409723	30409724	1	C	core_nonrep	3	0.75	1
Rue3-1-31	1	30410617	30410618	1	G	core_nonrep	11	1	1
Rue3-1-31	1	30415339	30415340	1	A	core_nonrep	4	1	1
Rue3-1-31	1	30417221	30417222	2	GT	core_nonrep	4	1	1
Rue3-1-31	1	30417538	30417539	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	1	30418348	30418349	1	T	core_nonrep	8	1	1
Rue3-1-31	1	30419289	30419290	1	A	core_nonrep	7	1	1
Rue3-1-31	1	30429349	30429350	1	A	core_nonrep	10	0.9	1
Rue3-1-31	1	30429374	30429375	1	A	core_nonrep	7	1	1
Rue3-1-31	2	70896	70897	1	A	core_nonrep	4	1	1
Rue3-1-31	2	72818	72819	2	CG	core_nonrep	5	1	1
Rue3-1-31	2	80117	80118	1	T	core_nonrep	5	1	1
Rue3-1-31	2	80547	80548	1	A	core_nonrep	13	1	1
Rue3-1-31	2	83758	83759	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	99691	99692	1	G	core_nonrep	5	1	1
Rue3-1-31	2	101169	101170	1	C	nonrep	4	1	1
Rue3-1-31	2	111088	111089	1	T	core_nonrep	3	1	1
Rue3-1-31	2	114857	114858	1	A	core_nonrep	5	1	1
Rue3-1-31	2	114860	114861	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	117424	117425	1	A	core_nonrep	5	1	1
Rue3-1-31	2	122613	122614	1	G	core_nonrep	10	0.8	1
Rue3-1-31	2	131279	131280	2	TA	core_nonrep	9	0.888889	1
Rue3-1-31	2	152683	152684	2	AG	core_nonrep	3	0.75	1
Rue3-1-31	2	153493	153494	1	A	core_nonrep	5	1	1
Rue3-1-31	2	155495	155496	1	T	core_nonrep	8	1	1
Rue3-1-31	2	156202	156203	1	A	core_nonrep	9	0.875	1
Rue3-1-31	2	160827	160828	2	AG	core_nonrep	3	1	1
Rue3-1-31	2	160828	160829	1	G	core_nonrep	3	1	1
Rue3-1-31	2	161298	161299	1	A	nonrep	3	0.75	1
Rue3-1-31	2	163652	163653	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	2	164720	164721	1	T	core_nonrep	6	1	1
Rue3-1-31	2	174226	174227	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	2	176791	176792	1	A	nonrep	3	0.75	1
Rue3-1-31	2	177286	177287	1	A	core_nonrep	12	1	1
Rue3-1-31	2	179394	179395	1	A	core_nonrep	5	1	1
Rue3-1-31	2	181926	181927	3	CTA	core_nonrep	3	1	1
Rue3-1-31	2	189857	189858	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	202969	202970	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	204110	204111	1	G	core_nonrep	8	1	1
Rue3-1-31	2	205716	205717	1	A	core_nonrep	3	1	1
Rue3-1-31	2	205942	205943	1	A	core_nonrep	5	0.75	1
Rue3-1-31	2	205963	205964	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	2	209945	209946	1	C	core_nonrep	7	1	1
Rue3-1-31	2	229530	229531	1	A	core_nonrep	3	1	1
Rue3-1-31	2	235637	235638	1	T	core_nonrep	3	1	1
Rue3-1-31	2	235638	235639	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	235639	235640	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	239082	239083	1	C	core_nonrep	7	1	1
Rue3-1-31	2	240405	240406	2	GG	core_nonrep	13	0.8125	1
Rue3-1-31	2	242682	242683	1	A	core_nonrep	14	1	1
Rue3-1-31	2	250284	250285	1	T	core_nonrep	5	1	1
Rue3-1-31	2	252237	252238	1	A	core_nonrep	4	1	1
Rue3-1-31	2	254022	254023	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	255071	255072	1	T	core_nonrep	7	1	1
Rue3-1-31	2	255383	255384	1	T	core_nonrep	6	1	1
Rue3-1-31	2	260295	260296	1	T	core_nonrep	5	1	1
Rue3-1-31	2	260729	260730	1	C	core_nonrep	3	1	1
Rue3-1-31	2	262833	262834	2	TA	core_nonrep	7	0.857143	1
Rue3-1-31	2	271874	271875	3	GGG	core_nonrep	12	0.833333	1
Rue3-1-31	2	272603	272604	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	273617	273618	1	A	core_nonrep	8	1	1
Rue3-1-31	2	273750	273751	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	273901	273902	1	T	nonrep	3	1	1
Rue3-1-31	2	276135	276136	1	C	core_nonrep	4	1	1
Rue3-1-31	2	276758	276759	1	A	nonrep	3	0.75	1
Rue3-1-31	2	277702	277703	1	T	core_nonrep	4	1	1
Rue3-1-31	2	277819	277820	1	T	core_nonrep	4	1	1
Rue3-1-31	2	283308	283309	2	TG	core_nonrep	12	1	1
Rue3-1-31	2	283418	283419	1	C	core_nonrep	7	1	1
Rue3-1-31	2	287576	287577	1	T	nonrep	5	0.714286	1
Rue3-1-31	2	291687	291688	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	292708	292709	1	T	core_nonrep	4	1	1
Rue3-1-31	2	292978	292979	1	T	core_nonrep	4	1	1
Rue3-1-31	2	294641	294642	1	T	core_nonrep	3	1	1
Rue3-1-31	2	296690	296691	1	A	core_nonrep	9	1	1
Rue3-1-31	2	300476	300477	1	T	core_nonrep	8	1	1
Rue3-1-31	2	313332	313333	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	320526	320527	1	G	core_nonrep	14	1	1
Rue3-1-31	2	325013	325014	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	325233	325234	1	G	core_nonrep	16	1	1
Rue3-1-31	2	336457	336458	1	A	core_nonrep	10	1	1
Rue3-1-31	2	336814	336815	1	T	core_nonrep	3	1	1
Rue3-1-31	2	336816	336817	1	A	core_nonrep	4	1	1
Rue3-1-31	2	339166	339167	1	G	core_nonrep	5	1	1
Rue3-1-31	2	346397	346398	1	T	nonrep	3	1	1
Rue3-1-31	2	347328	347329	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	349954	349955	1	A	core_nonrep	19	0.95	1
Rue3-1-31	2	350647	350648	1	C	core_nonrep	12	1	1
Rue3-1-31	2	354635	354636	1	A	core_nonrep	3	1	1
Rue3-1-31	2	356969	356970	1	T	nonrep	3	1	1
Rue3-1-31	2	366742	366743	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	2	368858	368859	1	A	core_nonrep	4	1	1
Rue3-1-31	2	380174	380175	1	T	core_nonrep	4	1	1
Rue3-1-31	2	385559	385560	1	C	core_nonrep	8	1	1
Rue3-1-31	2	386549	386550	1	T	core_nonrep	6	1	1
Rue3-1-31	2	389754	389755	1	A	core_nonrep	3	1	1
Rue3-1-31	2	403819	403820	1	A	core_nonrep	3	1	1
Rue3-1-31	2	407349	407350	1	G	core_nonrep	5	1	1
Rue3-1-31	2	408395	408396	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	412708	412709	1	T	core_nonrep	10	1	1
Rue3-1-31	2	413051	413052	1	T	core_nonrep	3	1	1
Rue3-1-31	2	416927	416928	1	G	core_nonrep	6	1	1
Rue3-1-31	2	417124	417125	1	C	core_nonrep	5	1	1
Rue3-1-31	2	426048	426049	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	438369	438370	1	G	core_nonrep	4	1	1
Rue3-1-31	2	446863	446864	1	A	nonrep	3	0.75	1
Rue3-1-31	2	447678	447679	1	A	core_nonrep	3	1	1
Rue3-1-31	2	449327	449328	1	T	core_nonrep	7	1	1
Rue3-1-31	2	450149	450150	1	T	core_nonrep	7	1	1
Rue3-1-31	2	455354	455355	1	T	core_nonrep	3	1	1
Rue3-1-31	2	456491	456492	1	A	core_nonrep	5	1	1
Rue3-1-31	2	459315	459316	1	T	core_nonrep	6	1	1
Rue3-1-31	2	464945	464946	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	466294	466295	1	G	core_nonrep	10	0.857143	1
Rue3-1-31	2	467418	467419	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	472529	472530	1	T	nonrep	4	0.8	1
Rue3-1-31	2	474137	474138	1	T	core_nonrep	6	1	1
Rue3-1-31	2	477576	477577	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	485763	485764	1	T	nonrep	3	0.75	1
Rue3-1-31	2	486366	486367	1	T	nonrep	5	0.714286	1
Rue3-1-31	2	494683	494684	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	504382	504383	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	509639	509640	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	509955	509956	1	C	core_nonrep	10	0.9	1
Rue3-1-31	2	509956	509957	1	T	core_nonrep	11	1	1
Rue3-1-31	2	509979	509980	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	2	513501	513502	1	T	nonrep	4	1	1
Rue3-1-31	2	513845	513846	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	514070	514071	2	AG	core_nonrep	7	0.714286	1
Rue3-1-31	2	516943	516944	1	N	nonrep	6	0.857143	1
Rue3-1-31	2	519427	519428	1	T	core_nonrep	4	1	1
Rue3-1-31	2	528544	528545	1	T	core_nonrep	7	1	1
Rue3-1-31	2	533636	533637	1	T	core_nonrep	7	1	1
Rue3-1-31	2	537423	537424	1	C	core_nonrep	7	1	1
Rue3-1-31	2	557534	557535	1	T	core_nonrep	5	1	1
Rue3-1-31	2	562675	562676	1	A	core_nonrep	5	1	1
Rue3-1-31	2	563013	563014	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	566071	566072	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	2	575635	575636	1	T	core_nonrep	12	0.6875	1.05263
Rue3-1-31	2	583030	583031	1	C	core_nonrep	3	1	1
Rue3-1-31	2	583224	583225	1	A	core_nonrep	9	1	1
Rue3-1-31	2	591881	591882	1	A	core_nonrep	3	1	1
Rue3-1-31	2	593572	593573	1	T	core_nonrep	12	1	1
Rue3-1-31	2	593845	593846	1	A	core_nonrep	4	1	1
Rue3-1-31	2	602878	602879	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	606436	606437	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	2	611277	611278	1	A	core_nonrep	7	1	1
Rue3-1-31	2	614155	614156	1	G	core_nonrep	6	1	1
Rue3-1-31	2	626083	626084	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	632520	632521	1	A	core_nonrep	6	1	1
Rue3-1-31	2	639525	639526	1	A	core_nonrep	3	1	1
Rue3-1-31	2	639780	639781	1	G	core_nonrep	4	1	1
Rue3-1-31	2	641523	641524	1	A	core_nonrep	9	0.8	1
Rue3-1-31	2	649152	649153	1	A	core_nonrep	14	0.857143	1
Rue3-1-31	2	651233	651234	2	CC	core_nonrep	4	1	1
Rue3-1-31	2	652977	652978	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	2	654815	654816	3	TTT	core_nonrep	3	1	1
Rue3-1-31	2	658083	658084	3	AAT	core_nonrep	3	0.75	1
Rue3-1-31	2	659904	659905	1	T	core_nonrep	4	1	1
Rue3-1-31	2	665632	665633	1	T	core_nonrep	3	1	1
Rue3-1-31	2	666347	666348	1	A	core_nonrep	4	1	1
Rue3-1-31	2	675972	675973	1	T	nonrep	3	1	1
Rue3-1-31	2	679578	679579	1	A	core_nonrep	3	1	1
Rue3-1-31	2	710368	710369	1	G	core_nonrep	4	1	1
Rue3-1-31	2	720922	720923	1	A	core_nonrep	3	1	1
Rue3-1-31	2	721550	721551	1	G	core_nonrep	10	1	1
Rue3-1-31	2	721606	721607	1	T	core_nonrep	12	1	1
Rue3-1-31	2	725692	725693	1	T	core_nonrep	5	1	1
Rue3-1-31	2	728942	728943	1	T	nonrep	3	0.75	1
Rue3-1-31	2	731919	731920	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	2	742825	742826	1	T	core_nonrep	3	1	1
Rue3-1-31	2	743888	743889	1	T	nonrep	3	0.75	1
Rue3-1-31	2	744113	744114	1	T	core_nonrep	4	1	1
Rue3-1-31	2	749911	749912	1	A	core_nonrep	5	1	1
Rue3-1-31	2	749989	749990	1	G	core_nonrep	7	1	1
Rue3-1-31	2	754658	754659	2	GT	core_nonrep	3	1	1
Rue3-1-31	2	758971	758972	1	T	core_nonrep	4	1	1
Rue3-1-31	2	760961	760962	1	T	core_nonrep	6	1	1
Rue3-1-31	2	761730	761731	1	A	nonrep	3	0.75	1
Rue3-1-31	2	762380	762381	1	T	core_nonrep	5	1	1
Rue3-1-31	2	764586	764587	1	A	core_nonrep	5	1	1
Rue3-1-31	2	765001	765002	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	2	767097	767098	2	GA	core_nonrep	4	0.8	1
Rue3-1-31	2	767098	767099	1	A	core_nonrep	5	1	1
Rue3-1-31	2	768420	768421	1	T	core_nonrep	4	1	1
Rue3-1-31	2	768639	768640	1	T	nonrep	4	1	1
Rue3-1-31	2	768931	768932	1	G	core_nonrep	4	1	1
Rue3-1-31	2	769669	769670	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	770327	770328	1	T	core_nonrep	9	1	1
Rue3-1-31	2	770864	770865	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	2	771124	771125	2	GT	core_nonrep	10	0.9	1
Rue3-1-31	2	771283	771284	1	G	core_nonrep	6	1	1
Rue3-1-31	2	773547	773548	1	A	core_nonrep	5	1	1
Rue3-1-31	2	773555	773556	1	A	core_nonrep	5	1	1
Rue3-1-31	2	773961	773962	1	A	core_nonrep	10	0.75	1
Rue3-1-31	2	781912	781913	1	C	core_nonrep	8	0.875	1
Rue3-1-31	2	781913	781914	1	T	core_nonrep	11	1	1
Rue3-1-31	2	784970	784971	2	TA	core_nonrep	9	1	1
Rue3-1-31	2	787267	787268	2	TT	core_nonrep	6	1	1
Rue3-1-31	2	791352	791353	2	TG	core_nonrep	15	1	1
Rue3-1-31	2	791848	791849	1	A	nonrep	3	1	1
Rue3-1-31	2	796840	796841	1	C	core_nonrep	4	1	1
Rue3-1-31	2	796841	796842	1	G	core_nonrep	4	1	1
Rue3-1-31	2	796842	796843	1	G	core_nonrep	4	1	1
Rue3-1-31	2	800058	800059	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	806539	806540	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	807846	807847	1	T	core_nonrep	7	0.8	1
Rue3-1-31	2	808067	808068	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	808180	808181	1	T	core_nonrep	4	0.75	1.14286
Rue3-1-31	2	810001	810002	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	810500	810501	2	TA	core_nonrep	3	1	1
Rue3-1-31	2	810502	810503	1	C	core_nonrep	4	0.75	1
Rue3-1-31	2	813159	813160	1	C	core_nonrep	7	1	1
Rue3-1-31	2	815668	815669	1	A	core_nonrep	4	1	1
Rue3-1-31	2	817398	817399	1	T	core_nonrep	7	1	1
Rue3-1-31	2	817773	817774	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	819302	819303	1	C	core_nonrep	14	1	1
Rue3-1-31	2	832010	832011	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	832011	832012	1	G	core_nonrep	7	1	1
Rue3-1-31	2	839778	839779	1	A	core_nonrep	7	1	1
Rue3-1-31	2	840297	840298	1	T	core_nonrep	5	1	1
Rue3-1-31	2	856504	856505	1	G	nonrep	4	0.8	1
Rue3-1-31	2	856510	856511	1	G	core_nonrep	4	1	1
Rue3-1-31	2	857160	857161	1	T	core_nonrep	3	1	1.71429
Rue3-1-31	2	862706	862707	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	875047	875048	1	C	core_nonrep	5	1	1
Rue3-1-31	2	877625	877626	1	G	core_nonrep	9	1	1
Rue3-1-31	2	878771	878772	1	G	core_nonrep	6	0.8	1.125
Rue3-1-31	2	880130	880131	1	T	core_nonrep	8	0.875	1.07143
Rue3-1-31	2	881591	881592	3	AGA	core_nonrep	5	1	1
Rue3-1-31	2	901170	901171	1	T	core_nonrep	11	1	1
Rue3-1-31	2	901326	901327	1	T	core_nonrep	4	1	1
Rue3-1-31	2	901508	901509	1	T	core_nonrep	9	1	1
Rue3-1-31	2	904377	904378	1	A	core_nonrep	4	1	1
Rue3-1-31	2	904434	904435	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	2	907859	907860	1	A	core_nonrep	9	1	1
Rue3-1-31	2	908928	908929	1	T	core_nonrep	9	1	1
Rue3-1-31	2	909388	909389	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	916187	916188	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	918641	918642	3	GAA	core_nonrep	5	0.8	1
Rue3-1-31	2	922061	922062	1	G	nonrep	5	1	1
Rue3-1-31	2	934704	934705	1	A	core_nonrep	4	1	1
Rue3-1-31	2	934841	934842	1	A	core_nonrep	3	1	1
Rue3-1-31	2	937275	937276	1	C	core_nonrep	13	0.909091	1
Rue3-1-31	2	937439	937440	1	T	core_nonrep	3	0.75	1.57143
Rue3-1-31	2	937480	937481	2	CC	core_nonrep	4	1	1
Rue3-1-31	2	938443	938444	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	941740	941741	1	C	core_nonrep	5	1	1
Rue3-1-31	2	943397	943398	1	T	core_nonrep	6	1	1
Rue3-1-31	2	954679	954680	1	T	core_nonrep	4	1	1
Rue3-1-31	2	959523	959524	1	C	core_nonrep	5	1	1
Rue3-1-31	2	960693	960694	1	T	core_nonrep	5	1	1
Rue3-1-31	2	963318	963319	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	2	970233	970234	1	A	core_nonrep	3	1	1
Rue3-1-31	2	970234	970235	1	C	core_nonrep	3	1	1
Rue3-1-31	2	970351	970352	1	A	core_nonrep	8	1	1
Rue3-1-31	2	972707	972708	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	972713	972714	1	A	core_nonrep	6	1	1
Rue3-1-31	2	977669	977670	1	A	core_nonrep	6	1	1
Rue3-1-31	2	978611	978612	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	979135	979136	1	T	core_nonrep	5	1	1
Rue3-1-31	2	983802	983803	1	A	core_nonrep	3	1	1
Rue3-1-31	2	987001	987002	1	A	core_nonrep	7	1	1
Rue3-1-31	2	991995	991996	1	C	core_nonrep	7	1	1
Rue3-1-31	2	993667	993668	1	A	core_nonrep	9	1	1
Rue3-1-31	2	1004941	1004942	1	A	nonrep	3	1	1
Rue3-1-31	2	1006583	1006584	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	1008979	1008980	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	2	1016104	1016105	1	T	nonrep	4	1	1
Rue3-1-31	2	1020853	1020854	1	A	core_nonrep	8	1	1
Rue3-1-31	2	1026254	1026255	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1026257	1026258	1	G	core_nonrep	5	1	1
Rue3-1-31	2	1026582	1026583	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1035373	1035374	1	A	core_nonrep	12	1	1
Rue3-1-31	2	1035997	1035998	2	TT	nonrep	6	1	1
Rue3-1-31	2	1039987	1039988	1	A	core_nonrep	7	1	1
Rue3-1-31	2	1056285	1056286	3	TAA	core_nonrep	3	1	1
Rue3-1-31	2	1060151	1060152	2	TA	core_nonrep	12	0.888889	1
Rue3-1-31	2	1062844	1062845	1	T	core_nonrep	6	0.75	1
Rue3-1-31	2	1062860	1062861	1	A	core_nonrep	6	1	1
Rue3-1-31	2	1062861	1062862	1	C	core_nonrep	6	1	1
Rue3-1-31	2	1063086	1063087	1	A	nonrep	3	0.75	1
Rue3-1-31	2	1064419	1064420	2	CT	core_nonrep	4	0.8	1
Rue3-1-31	2	1066615	1066616	1	C	core_nonrep	4	1	1
Rue3-1-31	2	1092327	1092328	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	1098382	1098383	2	GA	core_nonrep	6	0.75	1
Rue3-1-31	2	1099851	1099852	1	T	core_nonrep	14	1	1
Rue3-1-31	2	1107787	1107788	2	TT	core_nonrep	4	1	1
Rue3-1-31	2	1110552	1110553	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	1124856	1124857	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	1125174	1125175	3	ATT	core_nonrep	7	0.857143	1
Rue3-1-31	2	1126764	1126765	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1132642	1132643	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	1137261	1137262	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1141229	1141230	1	G	core_nonrep	3	1	1
Rue3-1-31	2	1156085	1156086	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1157162	1157163	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	1164681	1164682	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	1180245	1180246	1	T	core_nonrep	14	0.785714	1
Rue3-1-31	2	1181251	1181252	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	1185323	1185324	1	G	core_nonrep	8	1	1
Rue3-1-31	2	1185809	1185810	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1197538	1197539	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1197859	1197860	1	A	nonrep	4	1	1
Rue3-1-31	2	1200475	1200476	1	G	core_nonrep	5	1	1.4
Rue3-1-31	2	1213164	1213165	2	TT	core_nonrep	6	1	1
Rue3-1-31	2	1213604	1213605	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	2	1218361	1218362	1	A	nonrep	9	0.692308	1
Rue3-1-31	2	1222259	1222260	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	2	1233038	1233039	1	G	core_nonrep	13	1	1
Rue3-1-31	2	1249332	1249333	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	1253279	1253280	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1255444	1255445	1	C	nonrep	3	1	1
Rue3-1-31	2	1257360	1257361	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1259590	1259591	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1262487	1262488	1	A	core_nonrep	10	1	1
Rue3-1-31	2	1262513	1262514	2	AT	core_nonrep	3	1	1
Rue3-1-31	2	1275473	1275474	2	TG	core_nonrep	12	0.692308	1
Rue3-1-31	2	1279020	1279021	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1299559	1299560	1	C	core_nonrep	6	1	1
Rue3-1-31	2	1301209	1301210	1	C	core_nonrep	9	1	1
Rue3-1-31	2	1306454	1306455	1	C	core_nonrep	3	1	1
Rue3-1-31	2	1306642	1306643	1	C	core_nonrep	7	1	1
Rue3-1-31	2	1306961	1306962	1	A	nonrep	3	0.75	1
Rue3-1-31	2	1309323	1309324	1	T	core_nonrep	9	1	1
Rue3-1-31	2	1309374	1309375	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	1311786	1311787	1	T	core_nonrep	5	1	1
Rue3-1-31	2	1313331	1313332	1	T	core_nonrep	5	1	1
Rue3-1-31	2	1314374	1314375	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	1316655	1316656	1	T	nonrep	3	1	1
Rue3-1-31	2	1316821	1316822	3	TAC	core_nonrep	6	1	1
Rue3-1-31	2	1317899	1317900	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1319629	1319630	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	1319634	1319635	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1326066	1326067	1	T	nonrep	3	1	1
Rue3-1-31	2	1334088	1334089	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1336158	1336159	1	C	core_nonrep	6	1	1
Rue3-1-31	2	1337295	1337296	1	T	core_nonrep	8	1	1
Rue3-1-31	2	1337437	1337438	1	A	core_nonrep	6	1	1
Rue3-1-31	2	1339796	1339797	1	A	core_nonrep	9	1	1
Rue3-1-31	2	1344509	1344510	1	G	core_nonrep	3	1	1
Rue3-1-31	2	1344514	1344515	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	1344596	1344597	2	TT	nonrep	3	0.75	1
Rue3-1-31	2	1346068	1346069	1	C	core_nonrep	4	1	1
Rue3-1-31	2	1347046	1347047	1	C	core_nonrep	4	1	1
Rue3-1-31	2	1348697	1348698	2	AA	nonrep	4	1	1
Rue3-1-31	2	1352489	1352490	1	A	core_nonrep	16	1	1
Rue3-1-31	2	1353731	1353732	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	1357426	1357427	2	NN	core_nonrep	3	0.75	1.7931
Rue3-1-31	2	1399520	1399521	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	1407562	1407563	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1408267	1408268	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1410888	1410889	1	G	core_nonrep	4	1	1
Rue3-1-31	2	1411764	1411765	1	G	core_nonrep	5	1	1
Rue3-1-31	2	1411908	1411909	1	C	nonrep	4	0.8	1
Rue3-1-31	2	1415461	1415462	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	1420337	1420338	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	2	1424758	1424759	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	2	1425668	1425669	1	A	nonrep	3	1	1
Rue3-1-31	2	1430528	1430529	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1438555	1438556	1	A	core_nonrep	8	1	1
Rue3-1-31	2	1440663	1440664	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	1441001	1441002	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1443490	1443491	1	T	nonrep	3	0.75	1
Rue3-1-31	2	1445168	1445169	2	GC	core_nonrep	7	0.857143	1
Rue3-1-31	2	1458046	1458047	1	C	core_nonrep	3	1	1
Rue3-1-31	2	1464508	1464509	1	T	core_nonrep	7	1	1
Rue3-1-31	2	1469011	1469012	1	G	core_nonrep	4	1	1
Rue3-1-31	2	1469962	1469963	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	1470682	1470683	1	T	core_nonrep	15	1	1
Rue3-1-31	2	1471858	1471859	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1483315	1483316	1	G	core_nonrep	4	1	1
Rue3-1-31	2	1486458	1486459	1	T	core_nonrep	10	1	1
Rue3-1-31	2	1486607	1486608	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1488445	1488446	1	T	core_nonrep	5	1	1
Rue3-1-31	2	1489660	1489661	2	TC	core_nonrep	9	1	1
Rue3-1-31	2	1493747	1493748	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	1498847	1498848	1	A	core_nonrep	6	1	1
Rue3-1-31	2	1513754	1513755	1	G	core_nonrep	10	1	1
Rue3-1-31	2	1515091	1515092	1	T	core_nonrep	10	0.9	1
Rue3-1-31	2	1516667	1516668	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	1520650	1520651	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	1520893	1520894	3	GAA	core_nonrep	10	0.75	1
Rue3-1-31	2	1522343	1522344	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1528494	1528495	1	A	core_nonrep	12	1	1
Rue3-1-31	2	1530056	1530057	1	C	core_nonrep	8	1	1
Rue3-1-31	2	1531045	1531046	1	C	core_nonrep	5	1	1
Rue3-1-31	2	1531139	1531140	1	C	core_nonrep	5	1	1
Rue3-1-31	2	1532506	1532507	1	G	core_nonrep	13	0.846154	1
Rue3-1-31	2	1532892	1532893	3	TTT	core_nonrep	9	0.75	1
Rue3-1-31	2	1534091	1534092	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	1537222	1537223	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	1537554	1537555	1	T	nonrep	3	1	1
Rue3-1-31	2	1538402	1538403	1	T	core_nonrep	12	1	1
Rue3-1-31	2	1538970	1538971	1	G	core_nonrep	9	1	1
Rue3-1-31	2	1539293	1539294	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	1542202	1542203	1	C	core_nonrep	11	1	1
Rue3-1-31	2	1549985	1549986	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	1551677	1551678	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1553895	1553896	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1557351	1557352	1	C	core_nonrep	12	1	1
Rue3-1-31	2	1557543	1557544	1	C	core_nonrep	10	1	1
Rue3-1-31	2	1570898	1570899	1	C	core_nonrep	3	1	1
Rue3-1-31	2	1574509	1574510	1	A	core_nonrep	13	1	1
Rue3-1-31	2	1586175	1586176	1	T	nonrep	3	1	1
Rue3-1-31	2	1592400	1592401	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	2	1600159	1600160	1	C	core_nonrep	8	0.833333	1.11111
Rue3-1-31	2	1602026	1602027	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1602760	1602761	1	A	core_nonrep	10	0.875	1
Rue3-1-31	2	1602814	1602815	1	G	core_nonrep	25	1	1
Rue3-1-31	2	1613911	1613912	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	1619441	1619442	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1619959	1619960	1	C	core_nonrep	11	1	1
Rue3-1-31	2	1620412	1620413	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	1644965	1644966	1	A	core_nonrep	13	1	1
Rue3-1-31	2	1646433	1646434	1	T	core_nonrep	9	1	1
Rue3-1-31	2	1646441	1646442	1	A	core_nonrep	8	1	1
Rue3-1-31	2	1654529	1654530	1	G	core_nonrep	10	1	1
Rue3-1-31	2	1671079	1671080	1	A	core_nonrep	4	0.75	1.55556
Rue3-1-31	2	1672418	1672419	1	A	core_nonrep	5	1	1.125
Rue3-1-31	2	1673540	1673541	1	G	core_nonrep	6	1	1
Rue3-1-31	2	1676687	1676688	1	C	core_nonrep	4	1	1
Rue3-1-31	2	1689279	1689280	1	A	core_nonrep	8	1	1
Rue3-1-31	2	1692653	1692654	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	2	1695759	1695760	1	T	core_nonrep	6	1	1
Rue3-1-31	2	1702865	1702866	1	A	core_nonrep	10	1	1
Rue3-1-31	2	1711122	1711123	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	1728370	1728371	1	C	core_nonrep	8	1	1
Rue3-1-31	2	1732027	1732028	1	A	nonrep	4	0.8	1
Rue3-1-31	2	1735174	1735175	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	1757565	1757566	1	T	core_nonrep	7	0.833333	1.4375
Rue3-1-31	2	1762642	1762643	2	GA	nonrep	6	0.75	1
Rue3-1-31	2	1767079	1767080	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	1767495	1767496	1	A	core_nonrep	6	1	1
Rue3-1-31	2	1769209	1769210	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1772372	1772373	1	T	core_nonrep	13	1	1
Rue3-1-31	2	1772647	1772648	1	T	core_nonrep	9	1	1
Rue3-1-31	2	1773442	1773443	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	1775114	1775115	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	1775813	1775814	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1790531	1790532	1	A	core_nonrep	3	1	1
Rue3-1-31	2	1790532	1790533	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1790658	1790659	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	1800607	1800608	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	1801102	1801103	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1801104	1801105	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1823359	1823360	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1824875	1824876	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1827257	1827258	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1827631	1827632	1	A	core_nonrep	7	0.75	1
Rue3-1-31	2	1827993	1827994	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	1828000	1828001	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1828584	1828585	1	C	core_nonrep	9	1	1
Rue3-1-31	2	1833974	1833975	1	A	core_nonrep	7	0.8	1
Rue3-1-31	2	1836486	1836487	2	TT	core_nonrep	4	1	1
Rue3-1-31	2	1839629	1839630	1	T	core_nonrep	4	1	1
Rue3-1-31	2	1839920	1839921	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1839921	1839922	1	G	nonrep	4	0.8	1
Rue3-1-31	2	1841701	1841702	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	1843284	1843285	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	1843569	1843570	1	T	core_nonrep	10	1	1
Rue3-1-31	2	1847636	1847637	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1849797	1849798	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1850454	1850455	1	G	core_nonrep	8	1	1
Rue3-1-31	2	1851977	1851978	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1852030	1852031	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	1853714	1853715	1	G	core_nonrep	5	1	1
Rue3-1-31	2	1854754	1854755	1	T	core_nonrep	10	1	1
Rue3-1-31	2	1860932	1860933	1	A	core_nonrep	8	0.8	1
Rue3-1-31	2	1866216	1866217	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	1868864	1868865	1	A	core_nonrep	5	1	1
Rue3-1-31	2	1878785	1878786	1	A	core_nonrep	4	1	1
Rue3-1-31	2	1897409	1897410	1	T	core_nonrep	7	1	1
Rue3-1-31	2	1899196	1899197	1	A	core_nonrep	4	0.75	1.57143
Rue3-1-31	2	1903422	1903423	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	1916790	1916791	1	T	nonrep	4	0.8	1
Rue3-1-31	2	1923246	1923247	1	A	core_nonrep	11	0.875	1
Rue3-1-31	2	1926673	1926674	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	2	1927899	1927900	1	T	core_nonrep	3	1	1
Rue3-1-31	2	1931031	1931032	1	G	core_nonrep	13	0.833333	1
Rue3-1-31	2	1933611	1933612	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	1935985	1935986	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	2	1937384	1937385	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	2	1939432	1939433	1	A	core_nonrep	9	1	1
Rue3-1-31	2	1940189	1940190	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	1942635	1942636	1	C	core_nonrep	15	1	1
Rue3-1-31	2	1942783	1942784	1	G	core_nonrep	11	1	1
Rue3-1-31	2	1947429	1947430	2	TG	core_nonrep	18	1	1
Rue3-1-31	2	1949449	1949450	1	T	core_nonrep	9	1	1.33333
Rue3-1-31	2	1951823	1951824	1	C	core_nonrep	10	0.857143	1
Rue3-1-31	2	1962044	1962045	1	A	core_nonrep	12	1	1.25
Rue3-1-31	2	1965025	1965026	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	1967970	1967971	1	T	core_nonrep	7	1	1
Rue3-1-31	2	1968486	1968487	1	C	core_nonrep	3	1	1
Rue3-1-31	2	1983379	1983380	1	G	core_nonrep	4	1	1
Rue3-1-31	2	1983668	1983669	3	TAG	core_nonrep	6	0.857143	1
Rue3-1-31	2	1984511	1984512	1	A	core_nonrep	12	1	1
Rue3-1-31	2	1991298	1991299	1	T	core_nonrep	9	1	1
Rue3-1-31	2	2129443	2129444	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	2201716	2201717	1	G	core_nonrep	14	0.875	1
Rue3-1-31	2	2202848	2202849	1	A	core_nonrep	8	1	1
Rue3-1-31	2	2206523	2206524	3	GAT	core_nonrep	7	0.857143	1
Rue3-1-31	2	2211090	2211091	1	A	core_nonrep	7	1	1
Rue3-1-31	2	2211404	2211405	2	AA	core_nonrep	7	0.875	1
Rue3-1-31	2	2214218	2214219	1	A	core_nonrep	3	1	1
Rue3-1-31	2	2221726	2221727	1	T	nonrep	3	1	1.5
Rue3-1-31	2	2223114	2223115	1	A	nonrep	3	0.75	1
Rue3-1-31	2	2227660	2227661	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	2228468	2228469	1	G	core_nonrep	7	1	1
Rue3-1-31	2	2230785	2230786	1	T	core_nonrep	7	1	1
Rue3-1-31	2	2230999	2231000	1	A	core_nonrep	4	1	1
Rue3-1-31	2	2231118	2231119	1	C	core_nonrep	4	1	1
Rue3-1-31	2	2231347	2231348	1	C	core_nonrep	12	1	1
Rue3-1-31	2	2231720	2231721	1	T	core_nonrep	15	1	1
Rue3-1-31	2	2231965	2231966	1	G	core_nonrep	6	1	1
Rue3-1-31	2	2242127	2242128	1	A	core_nonrep	5	1	1
Rue3-1-31	2	2243863	2243864	1	T	core_nonrep	6	1	1
Rue3-1-31	2	2244531	2244532	1	C	core_nonrep	4	1	1
Rue3-1-31	2	2250515	2250516	1	T	core_nonrep	4	1	1.4
Rue3-1-31	2	2256928	2256929	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	2258383	2258384	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	2261369	2261370	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	2266575	2266576	1	A	core_nonrep	5	1	1
Rue3-1-31	2	2272988	2272989	1	T	nonrep	3	1	1
Rue3-1-31	2	2279346	2279347	1	G	core_nonrep	6	1	1
Rue3-1-31	2	2281547	2281548	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	2281550	2281551	1	A	core_nonrep	8	1	1
Rue3-1-31	2	2282080	2282081	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	2285294	2285295	1	G	core_nonrep	3	1	1
Rue3-1-31	2	2288281	2288282	1	G	core_nonrep	9	1	1
Rue3-1-31	2	2291536	2291537	1	A	core_nonrep	4	1	1
Rue3-1-31	2	2291537	2291538	1	T	core_nonrep	4	1	1
Rue3-1-31	2	2309793	2309794	1	T	core_nonrep	5	1	1
Rue3-1-31	2	2313653	2313654	1	A	core_nonrep	4	1	1
Rue3-1-31	2	2316055	2316056	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	2	2323716	2323717	1	G	core_nonrep	18	1	1
Rue3-1-31	2	2324675	2324676	2	TT	core_nonrep	11	0.818182	1
Rue3-1-31	2	2324694	2324695	1	G	core_nonrep	8	0.875	1
Rue3-1-31	2	2327015	2327016	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	2333591	2333592	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	2	2337104	2337105	1	T	core_nonrep	10	1	1
Rue3-1-31	2	2339310	2339311	1	A	core_nonrep	3	1	1
Rue3-1-31	2	2348810	2348811	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	2	2355543	2355544	1	T	core_nonrep	9	0.875	1
Rue3-1-31	2	2358025	2358026	1	T	nonrep	3	1	1
Rue3-1-31	2	2359224	2359225	1	C	nonrep	3	1	1
Rue3-1-31	2	2363650	2363651	1	A	nonrep	3	1	1
Rue3-1-31	2	2364141	2364142	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	2365147	2365148	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	2365817	2365818	1	T	core_nonrep	6	1	1
Rue3-1-31	2	2366507	2366508	1	A	core_nonrep	13	0.857143	1
Rue3-1-31	2	2368335	2368336	1	T	core_nonrep	8	1	1
Rue3-1-31	2	2368336	2368337	1	G	core_nonrep	8	1	1
Rue3-1-31	2	2375820	2375821	1	G	core_nonrep	21	1	1.16
Rue3-1-31	2	2385099	2385100	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	2390275	2390276	2	GG	core_nonrep	15	1	1.05556
Rue3-1-31	2	2404680	2404681	1	G	core_nonrep	6	1	1.14286
Rue3-1-31	2	2414242	2414243	1	A	core_nonrep	5	1	1
Rue3-1-31	2	2420795	2420796	1	C	core_nonrep	10	1	1
Rue3-1-31	2	2423681	2423682	1	G	core_nonrep	16	1	1
Rue3-1-31	2	2435189	2435190	1	G	core_nonrep	11	0.875	1
Rue3-1-31	2	2455801	2455802	1	T	core_nonrep	3	1	1
Rue3-1-31	2	2476301	2476302	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	2	2478821	2478822	1	A	core_nonrep	5	1	1
Rue3-1-31	2	2482763	2482764	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	2505162	2505163	1	A	core_nonrep	16	1	1.05556
Rue3-1-31	2	2510523	2510524	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	2	2536002	2536003	1	C	core_nonrep	6	0.8	1
Rue3-1-31	2	2536603	2536604	1	T	core_nonrep	7	1	1
Rue3-1-31	2	2581530	2581531	1	T	core_nonrep	8	1	1
Rue3-1-31	2	2584356	2584357	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	2584834	2584835	2	GA	core_nonrep	5	0.8	1
Rue3-1-31	2	2636037	2636038	1	T	core_nonrep	3	1	1.4
Rue3-1-31	2	2644389	2644390	1	N	core_nonrep	4	0.75	1.55556
Rue3-1-31	2	2696682	2696683	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	2704148	2704149	1	T	core_nonrep	3	1	1
Rue3-1-31	2	2712218	2712219	1	T	core_nonrep	11	1	1
Rue3-1-31	2	2713218	2713219	1	G	core_nonrep	8	1	1.33333
Rue3-1-31	2	2720226	2720227	1	G	core_nonrep	9	1	1
Rue3-1-31	2	2723046	2723047	2	GG	core_nonrep	10	0.818182	1
Rue3-1-31	2	2727444	2727445	1	C	core_nonrep	10	1	1
Rue3-1-31	2	2738024	2738025	1	A	core_nonrep	4	1	1
Rue3-1-31	2	2738368	2738369	1	A	core_nonrep	4	1	1.42857
Rue3-1-31	2	2739054	2739055	1	C	core	3	0.75	1.2
Rue3-1-31	2	2745302	2745303	1	T	nonrep	3	1	1
Rue3-1-31	2	2749717	2749718	1	C	core_nonrep	18	0.9375	1
Rue3-1-31	2	2753373	2753374	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	2754991	2754992	2	AA	core	3	0.75	1.2
Rue3-1-31	2	2756588	2756589	1	C	core_nonrep	7	1	1
Rue3-1-31	2	2756798	2756799	1	C	nonrep	4	0.8	1
Rue3-1-31	2	2757598	2757599	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	2	2758036	2758037	1	C	core_nonrep	11	1	1
Rue3-1-31	2	2758900	2758901	1	T	nonrep	3	1	1
Rue3-1-31	2	2759528	2759529	1	G	core_nonrep	8	1	1
Rue3-1-31	2	2761764	2761765	1	G	core_nonrep	3	1	1
Rue3-1-31	2	2763162	2763163	1	G	core_nonrep	6	1	1
Rue3-1-31	2	2768836	2768837	1	T	core_nonrep	6	1	1.36364
Rue3-1-31	2	2770070	2770071	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	2773620	2773621	1	T	core_nonrep	10	1	1
Rue3-1-31	2	2773972	2773973	1	G	core_nonrep	3	1	1
Rue3-1-31	2	2780486	2780487	1	A	core_nonrep	8	1	1
Rue3-1-31	2	2782001	2782002	1	T	core_nonrep	4	1	1
Rue3-1-31	2	2783350	2783351	1	A	core_nonrep	7	1	1
Rue3-1-31	2	2784320	2784321	1	A	core_nonrep	6	1	1
Rue3-1-31	2	2785798	2785799	1	T	core_nonrep	9	0.9	1
Rue3-1-31	2	2813504	2813505	1	A	core_nonrep	4	1	1.2
Rue3-1-31	2	2832790	2832791	1	T	core_nonrep	16	0.785714	1.08333
Rue3-1-31	2	2837755	2837756	1	A	core_nonrep	6	1	1
Rue3-1-31	2	2837796	2837797	1	A	core_nonrep	13	1	1
Rue3-1-31	2	2858057	2858058	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	2869480	2869481	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	2869981	2869982	1	A	nonrep	3	1	1
Rue3-1-31	2	2875244	2875245	1	C	core_nonrep	8	0.727273	1.77273
Rue3-1-31	2	2883869	2883870	1	C	core_nonrep	13	1	1
Rue3-1-31	2	2909847	2909848	1	T	core_nonrep	4	1	1
Rue3-1-31	2	2915949	2915950	1	T	core_nonrep	9	1	1
Rue3-1-31	2	2916156	2916157	1	C	core_nonrep	3	1	1
Rue3-1-31	2	2916492	2916493	1	C	core_nonrep	4	1	1
Rue3-1-31	2	2916493	2916494	1	C	core_nonrep	4	1	1
Rue3-1-31	2	2919231	2919232	1	T	core_nonrep	3	1	1
Rue3-1-31	2	2925146	2925147	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	2	2927850	2927851	1	T	core_nonrep	3	1	1
Rue3-1-31	2	2927851	2927852	1	A	core_nonrep	3	1	1
Rue3-1-31	2	2927852	2927853	1	A	core_nonrep	3	1	1
Rue3-1-31	2	2932243	2932244	1	A	core_nonrep	7	1	1
Rue3-1-31	2	2932244	2932245	1	G	core_nonrep	7	1	1
Rue3-1-31	2	2935636	2935637	1	G	core_nonrep	5	1	1
Rue3-1-31	2	2936343	2936344	1	G	core_nonrep	5	1	1
Rue3-1-31	2	2943070	2943071	1	G	core_nonrep	18	1	1
Rue3-1-31	2	2948825	2948826	1	T	core_nonrep	3	1	1
Rue3-1-31	2	2951008	2951009	1	T	core_nonrep	5	1	1
Rue3-1-31	2	2951068	2951069	1	A	nonrep	3	1	1
Rue3-1-31	2	2962157	2962158	1	A	core_nonrep	4	1	1
Rue3-1-31	2	2962262	2962263	1	T	nonrep	3	1	1
Rue3-1-31	2	2989599	2989600	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	2992190	2992191	1	T	core_nonrep	9	0.875	1
Rue3-1-31	2	2992345	2992346	1	T	core_nonrep	7	1	1
Rue3-1-31	2	3027909	3027910	1	A	core_nonrep	8	1	1
Rue3-1-31	2	3033518	3033519	1	G	core_nonrep	17	1	1
Rue3-1-31	2	3033799	3033800	1	C	core_nonrep	4	0.75	1
Rue3-1-31	2	3039045	3039046	1	A	core_nonrep	5	1	1
Rue3-1-31	2	3039450	3039451	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	3041802	3041803	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	3043132	3043133	1	C	core_nonrep	4	1	1
Rue3-1-31	2	3046244	3046245	1	T	core_nonrep	14	1	1
Rue3-1-31	2	3046262	3046263	1	G	core_nonrep	9	1	1
Rue3-1-31	2	3046305	3046306	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	2	3046676	3046677	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	3046994	3046995	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	3047341	3047342	2	CA	nonrep	6	0.75	1
Rue3-1-31	2	3048871	3048872	1	T	core_nonrep	9	1	1
Rue3-1-31	2	3050701	3050702	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	3055004	3055005	1	T	core_nonrep	5	1	1
Rue3-1-31	2	3056345	3056346	2	GA	core_nonrep	6	0.75	1
Rue3-1-31	2	3057017	3057018	1	T	core_nonrep	16	0.866667	1
Rue3-1-31	2	3057570	3057571	1	G	core_nonrep	11	1	1
Rue3-1-31	2	3058338	3058339	1	A	core_nonrep	7	1	1
Rue3-1-31	2	3058562	3058563	1	T	core_nonrep	3	1	1
Rue3-1-31	2	3058568	3058569	1	A	core_nonrep	4	1	1
Rue3-1-31	2	3059742	3059743	1	G	core_nonrep	8	1	1
Rue3-1-31	2	3065751	3065752	1	G	core_nonrep	5	1	1.375
Rue3-1-31	2	3065752	3065753	1	A	core_nonrep	4	1	1
Rue3-1-31	2	3069202	3069203	1	C	core_nonrep	9	1	1.66667
Rue3-1-31	2	3074367	3074368	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	3076072	3076073	1	G	core_nonrep	7	1	1.42857
Rue3-1-31	2	3079498	3079499	2	AA	core_nonrep	7	0.833333	1
Rue3-1-31	2	3082897	3082898	1	T	core_nonrep	11	1	1
Rue3-1-31	2	3114483	3114484	1	T	core_nonrep	15	0.933333	1
Rue3-1-31	2	3114694	3114695	1	A	core_nonrep	4	1	1
Rue3-1-31	2	3120107	3120108	1	C	core_nonrep	10	0.777778	1
Rue3-1-31	2	3121862	3121863	1	A	core_nonrep	6	1	1
Rue3-1-31	2	3133328	3133329	1	A	core_nonrep	4	1	1
Rue3-1-31	2	3152795	3152796	1	T	core_nonrep	3	1	1
Rue3-1-31	2	3167641	3167642	1	A	core_nonrep	4	1	1
Rue3-1-31	2	3168588	3168589	1	C	core_nonrep	9	0.875	1
Rue3-1-31	2	3170039	3170040	1	G	core_nonrep	6	1	1
Rue3-1-31	2	3199397	3199398	1	T	core_nonrep	3	1	1
Rue3-1-31	2	3219001	3219002	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	3221573	3221574	1	C	core_nonrep	10	0.875	1.2
Rue3-1-31	2	3222786	3222787	1	A	core_nonrep	12	1	1.30769
Rue3-1-31	2	3514994	3514995	1	A	core_nonrep	10	1	1
Rue3-1-31	2	3517411	3517412	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	2	3517412	3517413	2	TG	core_nonrep	10	0.8	1
Rue3-1-31	2	3521745	3521746	1	T	core_nonrep	10	1	1
Rue3-1-31	2	3527989	3527990	1	A	nonrep	3	0.75	1
Rue3-1-31	2	3528603	3528604	1	T	core_nonrep	5	1	1
Rue3-1-31	2	3530921	3530922	1	A	core_nonrep	3	1	1
Rue3-1-31	2	3531023	3531024	1	A	nonrep	4	0.8	1
Rue3-1-31	2	3536658	3536659	2	AA	core	4	1	1.33333
Rue3-1-31	2	3537785	3537786	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	2	3541222	3541223	1	A	core_nonrep	12	1	1
Rue3-1-31	2	3541928	3541929	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	3543097	3543098	1	T	core_nonrep	7	0.7	1
Rue3-1-31	2	3560925	3560926	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	3565972	3565973	1	A	core_nonrep	3	1	1
Rue3-1-31	2	3567353	3567354	1	T	core_nonrep	9	0.75	1
Rue3-1-31	2	3575578	3575579	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	3584731	3584732	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	2	3594664	3594665	1	G	nonrep	3	0.75	1
Rue3-1-31	2	3595175	3595176	1	C	core_nonrep	5	1	1
Rue3-1-31	2	3673577	3673578	1	T	core_nonrep	7	0.7	1
Rue3-1-31	2	3680784	3680785	1	T	core_nonrep	14	0.722222	1
Rue3-1-31	2	3680935	3680936	1	T	core_nonrep	9	1	1
Rue3-1-31	2	3692253	3692254	1	C	core_nonrep	15	0.909091	1
Rue3-1-31	2	3708472	3708473	1	A	core_nonrep	7	1	1
Rue3-1-31	2	3728126	3728127	1	C	core_nonrep	4	1	1
Rue3-1-31	2	3734119	3734120	1	T	core_nonrep	5	1	1
Rue3-1-31	2	3734484	3734485	1	T	core_nonrep	16	0.928571	1
Rue3-1-31	2	3737046	3737047	1	A	core_nonrep	7	1	1
Rue3-1-31	2	3742493	3742494	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	2	3747968	3747969	1	A	core_nonrep	11	1	1
Rue3-1-31	2	3754563	3754564	1	T	core_nonrep	3	1	1
Rue3-1-31	2	3755612	3755613	1	A	nonrep	5	0.714286	1
Rue3-1-31	2	3765237	3765238	1	A	core_nonrep	3	1	1
Rue3-1-31	2	3766193	3766194	1	C	core_nonrep	10	0.9	1
Rue3-1-31	2	3788150	3788151	1	A	core_nonrep	6	1	1
Rue3-1-31	2	3804928	3804929	1	T	core_nonrep	3	1	1
Rue3-1-31	2	3805600	3805601	1	A	core_nonrep	5	1	1
Rue3-1-31	2	3806667	3806668	1	A	core_nonrep	3	1	1
Rue3-1-31	2	3809494	3809495	1	T	core_nonrep	5	1	1
Rue3-1-31	2	3810909	3810910	2	CT	core_nonrep	3	0.75	1.125
Rue3-1-31	2	3810910	3810911	1	C	core_nonrep	3	0.75	1.125
Rue3-1-31	2	3812922	3812923	1	T	core_nonrep	7	1	1
Rue3-1-31	2	3814343	3814344	1	A	core_nonrep	7	1	1
Rue3-1-31	2	3815010	3815011	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	2	3827634	3827635	1	T	core_nonrep	8	0.7	1.3
Rue3-1-31	2	3833784	3833785	1	T	nonrep	9	0.692308	1
Rue3-1-31	2	3834530	3834531	1	T	core_nonrep	17	0.882353	1.48
Rue3-1-31	2	3851115	3851116	1	G	core_nonrep	10	1	1
Rue3-1-31	2	3859887	3859888	1	T	core_nonrep	4	1	1
Rue3-1-31	2	3861022	3861023	1	T	core_nonrep	20	0.695652	1
Rue3-1-31	2	3875802	3875803	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	2	3883714	3883715	1	G	core_nonrep	16	0.923077	1.17391
Rue3-1-31	2	3896728	3896729	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	2	3901366	3901367	1	A	core_nonrep	7	1	1
Rue3-1-31	2	3912181	3912182	1	T	core_nonrep	3	0.75	1.2
Rue3-1-31	2	3917884	3917885	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	2	3925274	3925275	1	A	core_nonrep	9	1	1
Rue3-1-31	2	3944247	3944248	1	T	core_nonrep	5	1	1
Rue3-1-31	2	3949531	3949532	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	2	3963655	3963656	1	A	core_nonrep	8	1	1.66667
Rue3-1-31	2	4003521	4003522	1	T	core_nonrep	8	1	1
Rue3-1-31	2	4011729	4011730	1	C	core_nonrep	3	1	1
Rue3-1-31	2	4029757	4029758	1	C	core_nonrep	5	1	1
Rue3-1-31	2	4035474	4035475	1	C	core_nonrep	4	1	1.66667
Rue3-1-31	2	4062392	4062393	1	T	core_nonrep	16	1	1
Rue3-1-31	2	4062451	4062452	1	A	core_nonrep	9	1	1
Rue3-1-31	2	4071536	4071537	1	G	core_nonrep	7	1	1
Rue3-1-31	2	4097061	4097062	1	C	core_nonrep	11	0.833333	1
Rue3-1-31	2	4103351	4103352	1	A	core_nonrep	7	1	1
Rue3-1-31	2	4111047	4111048	1	A	core_nonrep	10	1	1
Rue3-1-31	2	4112129	4112130	1	C	core_nonrep	3	1	1
Rue3-1-31	2	4118248	4118249	1	G	core_nonrep	11	0.818182	1
Rue3-1-31	2	4122653	4122654	1	G	core_nonrep	6	1	1
Rue3-1-31	2	4126809	4126810	1	T	core_nonrep	7	1	1
Rue3-1-31	2	4141353	4141354	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	4141778	4141779	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	4144043	4144044	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	4144044	4144045	1	A	core_nonrep	3	1	1
Rue3-1-31	2	4147938	4147939	1	A	core_nonrep	4	1	1
Rue3-1-31	2	4149957	4149958	1	A	core_nonrep	4	1	1
Rue3-1-31	2	4150521	4150522	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4151571	4151572	1	T	core_nonrep	5	1	1
Rue3-1-31	2	4152450	4152451	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4155778	4155779	1	C	core_nonrep	7	1	1
Rue3-1-31	2	4155926	4155927	2	AA	core_nonrep	10	0.818182	1
Rue3-1-31	2	4167352	4167353	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	4198252	4198253	1	C	nonrep	3	0.75	1.66667
Rue3-1-31	2	4203597	4203598	1	T	core_nonrep	6	1	1
Rue3-1-31	2	4235674	4235675	1	T	core_nonrep	19	1	1
Rue3-1-31	2	4235988	4235989	1	G	core_nonrep	7	0.714286	1
Rue3-1-31	2	4240724	4240725	1	C	core_nonrep	14	1	1
Rue3-1-31	2	4252147	4252148	1	C	core_nonrep	6	1	1
Rue3-1-31	2	4252149	4252150	2	TT	core_nonrep	6	0.833333	1
Rue3-1-31	2	4256106	4256107	1	T	core_nonrep	6	1	1
Rue3-1-31	2	4262297	4262298	1	T	core_nonrep	6	0.833333	1.11111
Rue3-1-31	2	4268029	4268030	1	G	core_nonrep	12	0.916667	1
Rue3-1-31	2	4269215	4269216	1	A	core_nonrep	5	1	1
Rue3-1-31	2	4271545	4271546	1	T	core_nonrep	4	1	1
Rue3-1-31	2	4277744	4277745	1	C	core_nonrep	4	1	1
Rue3-1-31	2	4281484	4281485	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	4293542	4293543	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	4309263	4309264	1	C	core_nonrep	5	1	1
Rue3-1-31	2	4319319	4319320	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	4326623	4326624	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	2	4326624	4326625	1	A	core_nonrep	9	0.75	1
Rue3-1-31	2	4335062	4335063	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4335376	4335377	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	4337999	4338000	1	T	core_nonrep	9	1	1
Rue3-1-31	2	4339393	4339394	1	T	core_nonrep	4	1	1
Rue3-1-31	2	4383748	4383749	1	T	core_nonrep	4	0.8	1.125
Rue3-1-31	2	4384398	4384399	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	4384399	4384400	1	C	core_nonrep	7	1	1
Rue3-1-31	2	4384416	4384417	1	T	core_nonrep	8	1	1
Rue3-1-31	2	4400800	4400801	1	A	core_nonrep	9	1	1
Rue3-1-31	2	4404927	4404928	1	G	core_nonrep	9	1	1
Rue3-1-31	2	4427931	4427932	1	A	core_nonrep	8	1	1
Rue3-1-31	2	4429422	4429423	1	A	core_nonrep	7	1	1
Rue3-1-31	2	4430567	4430568	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4434965	4434966	1	C	core_nonrep	5	1	1
Rue3-1-31	2	4435762	4435763	1	G	core_nonrep	10	1	1
Rue3-1-31	2	4437699	4437700	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	4439748	4439749	2	TT	core_nonrep	10	1	1
Rue3-1-31	2	4446116	4446117	1	T	core_nonrep	4	1	1
Rue3-1-31	2	4456122	4456123	1	G	core_nonrep	3	1	1
Rue3-1-31	2	4471394	4471395	1	A	core_nonrep	3	1	1
Rue3-1-31	2	4510251	4510252	1	T	core_nonrep	6	1	1
Rue3-1-31	2	4510815	4510816	1	T	nonrep	7	0.875	1
Rue3-1-31	2	4515228	4515229	1	C	core_nonrep	6	1	1
Rue3-1-31	2	4538595	4538596	1	T	core_nonrep	15	1	1
Rue3-1-31	2	4544780	4544781	1	C	core_nonrep	9	1	1
Rue3-1-31	2	4547080	4547081	1	A	nonrep	5	0.833333	1
Rue3-1-31	2	4549005	4549006	1	T	core_nonrep	10	1	1
Rue3-1-31	2	4590240	4590241	1	A	core_nonrep	3	1	1
Rue3-1-31	2	4593611	4593612	1	A	core_nonrep	4	1	1
Rue3-1-31	2	4595684	4595685	1	C	core_nonrep	10	0.75	1
Rue3-1-31	2	4596677	4596678	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	2	4596680	4596681	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	4599838	4599839	1	C	core_nonrep	8	1	1
Rue3-1-31	2	4610276	4610277	1	T	core_nonrep	7	0.7	1
Rue3-1-31	2	4620350	4620351	1	T	core_nonrep	4	1	1
Rue3-1-31	2	4626029	4626030	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	2	4649962	4649963	1	G	core_nonrep	21	1	1.82759
Rue3-1-31	2	4653032	4653033	1	A	core_nonrep	5	1	1
Rue3-1-31	2	4653033	4653034	1	C	core_nonrep	5	1	1
Rue3-1-31	2	4663354	4663355	1	A	core_nonrep	11	0.75	1
Rue3-1-31	2	4663513	4663514	1	C	core_nonrep	12	1	1
Rue3-1-31	2	4668056	4668057	1	A	core_nonrep	7	1	1
Rue3-1-31	2	4671755	4671756	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	4679936	4679937	1	T	core_nonrep	9	1	1
Rue3-1-31	2	4684415	4684416	1	C	core_nonrep	10	1	1
Rue3-1-31	2	4694811	4694812	1	C	core_nonrep	4	1	1.25
Rue3-1-31	2	4715163	4715164	1	T	core_nonrep	5	1	1
Rue3-1-31	2	4715652	4715653	1	A	core_nonrep	7	1	1.14286
Rue3-1-31	2	4732263	4732264	1	G	core_nonrep	12	1	1
Rue3-1-31	2	4732607	4732608	1	G	core_nonrep	6	0.75	1
Rue3-1-31	2	4733440	4733441	1	G	core_nonrep	13	1	1
Rue3-1-31	2	4733476	4733477	1	T	core_nonrep	12	1	1
Rue3-1-31	2	4735273	4735274	1	A	core_nonrep	7	1	1.42857
Rue3-1-31	2	4736741	4736742	1	G	core_nonrep	4	1	1
Rue3-1-31	2	4744781	4744782	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	4745652	4745653	1	T	core_nonrep	7	1	1
Rue3-1-31	2	4749917	4749918	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	2	4750366	4750367	1	C	core_nonrep	7	0.875	1
Rue3-1-31	2	4758868	4758869	1	T	core_nonrep	5	1	1
Rue3-1-31	2	4765563	4765564	1	A	core_nonrep	4	1	1.2
Rue3-1-31	2	4768952	4768953	1	T	core_nonrep	5	1	1.33333
Rue3-1-31	2	4769786	4769787	1	A	core_nonrep	4	1	1
Rue3-1-31	2	4774219	4774220	1	C	core_nonrep	12	0.916667	1
Rue3-1-31	2	4795640	4795641	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4796910	4796911	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	4800180	4800181	1	G	core_nonrep	3	1	1
Rue3-1-31	2	4805975	4805976	1	A	core_nonrep	7	1	1
Rue3-1-31	2	4811249	4811250	1	T	core_nonrep	5	1	1
Rue3-1-31	2	4811444	4811445	1	A	core_nonrep	8	1	1
Rue3-1-31	2	4812824	4812825	1	A	core_nonrep	7	1	1
Rue3-1-31	2	4818053	4818054	1	A	core_nonrep	16	1	1
Rue3-1-31	2	4820663	4820664	1	G	core_nonrep	9	1	1
Rue3-1-31	2	4823934	4823935	1	C	core_nonrep	6	1	1
Rue3-1-31	2	4825066	4825067	1	C	nonrep	5	1	1.33333
Rue3-1-31	2	4831770	4831771	1	G	nonrep	7	0.777778	1
Rue3-1-31	2	4856299	4856300	1	A	core_nonrep	8	1	1.16667
Rue3-1-31	2	4858533	4858534	1	C	core_nonrep	21	0.947368	1
Rue3-1-31	2	4858654	4858655	2	GT	core_nonrep	23	1	1
Rue3-1-31	2	4860819	4860820	1	G	core_nonrep	4	1	1
Rue3-1-31	2	4865064	4865065	1	T	core_nonrep	16	1	1.10526
Rue3-1-31	2	4866956	4866957	1	C	core_nonrep	8	1	1
Rue3-1-31	2	4867463	4867464	1	T	core	4	0.8	1.2
Rue3-1-31	2	4877231	4877232	2	TA	nonrep	3	0.75	1
Rue3-1-31	2	4877529	4877530	1	A	core_nonrep	4	1	1
Rue3-1-31	2	4902230	4902231	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	2	4912100	4912101	1	T	core_nonrep	6	1	1
Rue3-1-31	2	4932009	4932010	1	A	core_nonrep	3	1	1
Rue3-1-31	2	4948878	4948879	1	A	nonrep	3	0.75	1
Rue3-1-31	2	4952407	4952408	1	G	core_nonrep	8	1	1
Rue3-1-31	2	4955718	4955719	1	T	core_nonrep	3	1	1
Rue3-1-31	2	4970107	4970108	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	4970288	4970289	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	4981583	4981584	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5053477	5053478	1	C	core_nonrep	11	1	1
Rue3-1-31	2	5059804	5059805	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5060438	5060439	1	C	core_nonrep	4	1	1
Rue3-1-31	2	5067411	5067412	1	C	core_nonrep	9	1	1
Rue3-1-31	2	5069405	5069406	1	T	core_nonrep	4	1	1
Rue3-1-31	2	5072233	5072234	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	2	5072235	5072236	1	T	core_nonrep	9	1	1
Rue3-1-31	2	5123627	5123628	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	5128429	5128430	1	G	core_nonrep	7	1	1
Rue3-1-31	2	5172746	5172747	1	T	core_nonrep	3	1	1
Rue3-1-31	2	5174129	5174130	1	A	nonrep	4	0.8	1
Rue3-1-31	2	5174131	5174132	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	5176925	5176926	1	T	core_nonrep	9	1	1
Rue3-1-31	2	5178969	5178970	2	TC	core_nonrep	6	1	1
Rue3-1-31	2	5185065	5185066	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5185103	5185104	1	C	core_nonrep	7	1	1
Rue3-1-31	2	5186869	5186870	1	T	nonrep	4	0.8	1
Rue3-1-31	2	5192196	5192197	1	T	core_nonrep	11	1	1
Rue3-1-31	2	5197415	5197416	1	T	core_nonrep	3	1	1
Rue3-1-31	2	5197825	5197826	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	5222738	5222739	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	2	5223630	5223631	1	A	nonrep	7	0.875	1
Rue3-1-31	2	5225776	5225777	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	2	5225778	5225779	1	C	core_nonrep	13	0.928571	1
Rue3-1-31	2	5245546	5245547	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5247077	5247078	1	C	core_nonrep	20	1	1
Rue3-1-31	2	5250950	5250951	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	5252383	5252384	1	T	core_nonrep	13	0.833333	1
Rue3-1-31	2	5255836	5255837	1	G	core_nonrep	14	1	1
Rue3-1-31	2	5287093	5287094	1	G	core_nonrep	5	1	1
Rue3-1-31	2	5294733	5294734	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5297148	5297149	1	C	core_nonrep	4	1	1
Rue3-1-31	2	5298197	5298198	1	A	core_nonrep	7	1	1
Rue3-1-31	2	5299858	5299859	1	A	nonrep	3	1	1
Rue3-1-31	2	5299866	5299867	1	A	core_nonrep	4	1	1
Rue3-1-31	2	5301953	5301954	1	T	core_nonrep	6	1	1
Rue3-1-31	2	5305104	5305105	1	C	core_nonrep	5	1	1
Rue3-1-31	2	5321191	5321192	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	5323472	5323473	1	T	nonrep	3	1	1
Rue3-1-31	2	5324476	5324477	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	5325704	5325705	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	5333816	5333817	1	A	core_nonrep	8	1	1
Rue3-1-31	2	5345112	5345113	2	AT	core_nonrep	5	1	1
Rue3-1-31	2	5345115	5345116	1	T	core_nonrep	6	1	1.27273
Rue3-1-31	2	5354568	5354569	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5363275	5363276	1	C	core_nonrep	9	1	1.27273
Rue3-1-31	2	5373768	5373769	1	A	core_nonrep	9	1	1.09091
Rue3-1-31	2	5388486	5388487	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5389244	5389245	1	G	core_nonrep	10	0.727273	1
Rue3-1-31	2	5392197	5392198	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5395205	5395206	1	T	core_nonrep	7	0.8	1
Rue3-1-31	2	5409411	5409412	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5411179	5411180	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	2	5412501	5412502	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	5412820	5412821	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	5418348	5418349	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	5418356	5418357	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	5419750	5419751	1	C	core_nonrep	21	0.944444	1
Rue3-1-31	2	5420165	5420166	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	5420173	5420174	1	C	core_nonrep	4	0.8	1
Rue3-1-31	2	5420990	5420991	1	T	core_nonrep	3	1	1
Rue3-1-31	2	5422083	5422084	1	C	core_nonrep	13	1	1
Rue3-1-31	2	5423994	5423995	1	C	core_nonrep	5	1	1
Rue3-1-31	2	5430379	5430380	1	T	core_nonrep	6	1	1
Rue3-1-31	2	5431086	5431087	1	C	core_nonrep	8	1	1
Rue3-1-31	2	5435670	5435671	3	ATC	core_nonrep	3	0.75	1
Rue3-1-31	2	5441028	5441029	1	T	core_nonrep	3	1	1
Rue3-1-31	2	5445171	5445172	1	A	core_nonrep	4	1	1
Rue3-1-31	2	5453017	5453018	1	G	nonrep	3	0.75	1
Rue3-1-31	2	5457562	5457563	1	C	core_nonrep	18	0.894737	1
Rue3-1-31	2	5462298	5462299	2	AA	core_nonrep	4	0.75	1.5
Rue3-1-31	2	5465079	5465080	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5465111	5465112	1	A	core_nonrep	10	1	1.36364
Rue3-1-31	2	5466131	5466132	1	C	core_nonrep	16	1	1
Rue3-1-31	2	5468520	5468521	1	A	nonrep	4	1	1
Rue3-1-31	2	5481712	5481713	1	T	core	3	1	1.33333
Rue3-1-31	2	5492286	5492287	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	2	5514285	5514286	1	T	core_nonrep	4	1	1
Rue3-1-31	2	5514868	5514869	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	5515764	5515765	1	A	core_nonrep	11	0.9	1
Rue3-1-31	2	5516176	5516177	1	C	core_nonrep	7	1	1
Rue3-1-31	2	5517070	5517071	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5524660	5524661	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5526433	5526434	1	A	core_nonrep	9	1	1
Rue3-1-31	2	5529898	5529899	1	G	core_nonrep	7	1	1
Rue3-1-31	2	5538473	5538474	1	G	core_nonrep	11	1	1
Rue3-1-31	2	5541843	5541844	1	T	nonrep	3	1	1
Rue3-1-31	2	5542983	5542984	1	A	core_nonrep	8	1	1
Rue3-1-31	2	5545540	5545541	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	2	5545795	5545796	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5554907	5554908	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	5557536	5557537	1	G	core_nonrep	5	1	1
Rue3-1-31	2	5559847	5559848	1	A	core_nonrep	9	1	1
Rue3-1-31	2	5566077	5566078	1	G	core_nonrep	4	1	1
Rue3-1-31	2	5587951	5587952	1	T	core_nonrep	4	1	1
Rue3-1-31	2	5593610	5593611	1	T	core_nonrep	6	1	1
Rue3-1-31	2	5602090	5602091	1	A	core_nonrep	10	1	1
Rue3-1-31	2	5607119	5607120	1	T	core_nonrep	5	1	1
Rue3-1-31	2	5612421	5612422	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	5612422	5612423	1	T	core_nonrep	5	1	1
Rue3-1-31	2	5613144	5613145	1	C	core_nonrep	4	0.75	1
Rue3-1-31	2	5616726	5616727	2	CC	core_nonrep	7	1	1
Rue3-1-31	2	5616736	5616737	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	5617306	5617307	1	T	core_nonrep	10	0.9	1
Rue3-1-31	2	5617414	5617415	1	G	core_nonrep	6	1	1
Rue3-1-31	2	5617685	5617686	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5623513	5623514	1	C	core_nonrep	12	1	1
Rue3-1-31	2	5627880	5627881	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	2	5628512	5628513	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	5628742	5628743	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	5632074	5632075	1	T	core_nonrep	3	1	1
Rue3-1-31	2	5637094	5637095	2	GA	core_nonrep	5	1	1
Rue3-1-31	2	5638434	5638435	1	T	core_nonrep	9	1	1
Rue3-1-31	2	5643608	5643609	2	TC	core_nonrep	10	1	1
Rue3-1-31	2	5643609	5643610	1	A	core_nonrep	11	0.9	1
Rue3-1-31	2	5649962	5649963	1	T	core_nonrep	8	1	1
Rue3-1-31	2	5652003	5652004	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	2	5662815	5662816	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	5662816	5662817	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	5688696	5688697	1	A	nonrep	3	0.75	1
Rue3-1-31	2	5693604	5693605	3	CAG	core_nonrep	5	0.8	1.38462
Rue3-1-31	2	5695735	5695736	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	5695953	5695954	2	TG	core_nonrep	14	0.923077	1
Rue3-1-31	2	5696251	5696252	1	T	core_nonrep	10	1	1
Rue3-1-31	2	5696996	5696997	1	A	core_nonrep	6	1	1
Rue3-1-31	2	5716018	5716019	1	A	core_nonrep	11	1	1
Rue3-1-31	2	5720702	5720703	2	AC	core_nonrep	13	1	1
Rue3-1-31	2	5723635	5723636	1	C	core_nonrep	5	0.75	1
Rue3-1-31	2	5724156	5724157	1	T	nonrep	4	0.8	1
Rue3-1-31	2	5725078	5725079	1	A	core_nonrep	7	1	1
Rue3-1-31	2	5725167	5725168	1	T	core_nonrep	7	1	1
Rue3-1-31	2	5726106	5726107	1	T	core_nonrep	5	1	1
Rue3-1-31	2	5731729	5731730	1	A	core_nonrep	4	1	1
Rue3-1-31	2	5731756	5731757	1	G	core_nonrep	5	0.75	1
Rue3-1-31	2	5738558	5738559	2	CT	core_nonrep	8	0.7	1
Rue3-1-31	2	5745627	5745628	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5750543	5750544	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	2	5751151	5751152	1	C	nonrep	5	0.833333	1
Rue3-1-31	2	5752776	5752777	1	T	core_nonrep	11	1	1
Rue3-1-31	2	5756765	5756766	1	A	core_nonrep	8	1	1
Rue3-1-31	2	5757482	5757483	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5760205	5760206	1	G	core_nonrep	4	1	1
Rue3-1-31	2	5761167	5761168	2	TA	core_nonrep	5	1	1
Rue3-1-31	2	5761168	5761169	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5761541	5761542	2	AC	core_nonrep	11	1	1
Rue3-1-31	2	5764549	5764550	1	C	core_nonrep	3	1	1
Rue3-1-31	2	5764967	5764968	1	A	core_nonrep	4	1	1
Rue3-1-31	2	5769180	5769181	1	C	nonrep	3	1	1
Rue3-1-31	2	5770005	5770006	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	5775032	5775033	1	T	core_nonrep	6	1	1
Rue3-1-31	2	5776192	5776193	1	C	core_nonrep	3	1	1
Rue3-1-31	2	5777592	5777593	1	G	core_nonrep	6	1	1
Rue3-1-31	2	5777846	5777847	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	5787539	5787540	1	A	core_nonrep	4	1	1
Rue3-1-31	2	5798926	5798927	1	T	core_nonrep	4	1	1
Rue3-1-31	2	5799969	5799970	1	C	core_nonrep	13	1	1
Rue3-1-31	2	5802739	5802740	1	C	core_nonrep	10	1	1
Rue3-1-31	2	5808017	5808018	1	A	core_nonrep	5	1	1
Rue3-1-31	2	5824285	5824286	1	T	core_nonrep	12	0.888889	1
Rue3-1-31	2	5825539	5825540	1	A	nonrep	3	1	1
Rue3-1-31	2	5828931	5828932	1	T	core_nonrep	10	1	1
Rue3-1-31	2	5831065	5831066	1	C	core_nonrep	4	0.75	1.125
Rue3-1-31	2	5842730	5842731	1	G	core_nonrep	4	1	1
Rue3-1-31	2	5842968	5842969	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	2	5850406	5850407	1	C	core_nonrep	4	1	1.5
Rue3-1-31	2	5866841	5866842	1	G	core_nonrep	14	0.923077	1.05882
Rue3-1-31	2	5873150	5873151	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5876490	5876491	1	T	core_nonrep	5	1	1
Rue3-1-31	2	5881184	5881185	1	G	core_nonrep	4	1	1.14286
Rue3-1-31	2	5882372	5882373	2	TG	core_nonrep	7	1	1
Rue3-1-31	2	5905949	5905950	1	C	core_nonrep	3	1	1
Rue3-1-31	2	5906512	5906513	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5909542	5909543	1	T	core_nonrep	6	1	1
Rue3-1-31	2	5909543	5909544	1	C	core_nonrep	6	1	1
Rue3-1-31	2	5912912	5912913	1	G	core_nonrep	5	1	1
Rue3-1-31	2	5913549	5913550	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	5916302	5916303	1	T	core_nonrep	8	1	1
Rue3-1-31	2	5918199	5918200	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	2	5921030	5921031	1	A	core_nonrep	7	1	1
Rue3-1-31	2	5921103	5921104	1	G	core_nonrep	9	1	1
Rue3-1-31	2	5923333	5923334	2	CC	core_nonrep	7	1	1
Rue3-1-31	2	5928943	5928944	1	G	core_nonrep	8	1	1
Rue3-1-31	2	5930924	5930925	1	G	core_nonrep	3	1	1
Rue3-1-31	2	5936849	5936850	1	A	core_nonrep	3	1	1
Rue3-1-31	2	5937677	5937678	1	C	core_nonrep	5	1	1
Rue3-1-31	2	5958782	5958783	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	5959079	5959080	1	C	nonrep	5	1	1
Rue3-1-31	2	5960466	5960467	1	T	core_nonrep	12	1	1
Rue3-1-31	2	5960635	5960636	1	T	core_nonrep	9	1	1
Rue3-1-31	2	5988767	5988768	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	2	5988770	5988771	2	AT	core_nonrep	9	0.818182	1
Rue3-1-31	2	5989017	5989018	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	5998676	5998677	1	C	core_nonrep	3	1	1.5
Rue3-1-31	2	6009585	6009586	1	C	core_nonrep	4	1	1
Rue3-1-31	2	6024848	6024849	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	6039822	6039823	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6059254	6059255	1	A	core_nonrep	8	1	1
Rue3-1-31	2	6060562	6060563	1	G	nonrep	3	1	1
Rue3-1-31	2	6060564	6060565	1	A	nonrep	3	1	1
Rue3-1-31	2	6061515	6061516	1	T	nonrep	4	1	1
Rue3-1-31	2	6063792	6063793	1	T	core_nonrep	14	0.857143	1
Rue3-1-31	2	6064368	6064369	1	C	core_nonrep	10	1	1
Rue3-1-31	2	6066535	6066536	1	A	nonrep	5	0.833333	1
Rue3-1-31	2	6073662	6073663	1	C	core_nonrep	10	0.833333	1.23077
Rue3-1-31	2	6076813	6076814	1	T	core_nonrep	6	1	1.27273
Rue3-1-31	2	6077918	6077919	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	2	6089773	6089774	1	T	core_nonrep	10	0.9	1
Rue3-1-31	2	6093226	6093227	1	A	nonrep	3	1	1
Rue3-1-31	2	6096416	6096417	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6099055	6099056	1	G	core_nonrep	12	0.727273	1
Rue3-1-31	2	6120645	6120646	1	T	core_nonrep	6	0.714286	1.26667
Rue3-1-31	2	6147511	6147512	1	T	core_nonrep	6	1	1.57143
Rue3-1-31	2	6162857	6162858	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	6170394	6170395	1	A	core_nonrep	6	1	1.25
Rue3-1-31	2	6185951	6185952	1	T	core_nonrep	15	1	1
Rue3-1-31	2	6192072	6192073	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	6193563	6193564	1	T	core_nonrep	7	1	1
Rue3-1-31	2	6200669	6200670	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	2	6206572	6206573	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	6208276	6208277	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6208355	6208356	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	6210876	6210877	1	T	core_nonrep	9	1	1
Rue3-1-31	2	6212508	6212509	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	6215837	6215838	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	6216126	6216127	1	A	nonrep	4	1	1
Rue3-1-31	2	6222350	6222351	1	C	core_nonrep	4	1	1
Rue3-1-31	2	6227424	6227425	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	6231733	6231734	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	6242125	6242126	1	G	core_nonrep	4	1	1
Rue3-1-31	2	6243161	6243162	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	6246901	6246902	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	6250890	6250891	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6254365	6254366	1	G	core_nonrep	4	1	1
Rue3-1-31	2	6255331	6255332	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6261286	6261287	2	AA	core_nonrep	12	0.818182	1
Rue3-1-31	2	6261423	6261424	1	T	core_nonrep	7	1	1
Rue3-1-31	2	6278641	6278642	1	C	core_nonrep	7	0.75	1
Rue3-1-31	2	6311643	6311644	1	A	nonrep	3	1	1
Rue3-1-31	2	6313075	6313076	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6314487	6314488	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	2	6315223	6315224	1	G	core_nonrep	6	1	1
Rue3-1-31	2	6315968	6315969	1	A	core_nonrep	16	0.916667	1
Rue3-1-31	2	6320803	6320804	1	C	core_nonrep	3	1	1
Rue3-1-31	2	6327159	6327160	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6328701	6328702	1	A	nonrep	3	1	1
Rue3-1-31	2	6335267	6335268	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6353893	6353894	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	6355091	6355092	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	2	6356048	6356049	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6358135	6358136	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	6358219	6358220	1	T	core_nonrep	6	1	1
Rue3-1-31	2	6368616	6368617	1	G	core_nonrep	7	0.875	1
Rue3-1-31	2	6374061	6374062	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6374729	6374730	1	T	core_nonrep	12	1	1
Rue3-1-31	2	6377285	6377286	1	T	core_nonrep	11	0.6875	1
Rue3-1-31	2	6378513	6378514	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	6382261	6382262	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6382530	6382531	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	6382823	6382824	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6384639	6384640	1	A	core_nonrep	13	0.888889	1
Rue3-1-31	2	6387435	6387436	1	T	core_nonrep	7	1	1
Rue3-1-31	2	6387439	6387440	1	A	core_nonrep	7	1	1
Rue3-1-31	2	6392955	6392956	1	A	core_nonrep	7	1	1
Rue3-1-31	2	6392969	6392970	1	A	core_nonrep	5	0.75	1
Rue3-1-31	2	6397170	6397171	1	A	core_nonrep	5	1	1
Rue3-1-31	2	6400428	6400429	1	C	core_nonrep	5	1	1
Rue3-1-31	2	6400649	6400650	1	C	core_nonrep	5	1	1
Rue3-1-31	2	6416168	6416169	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	2	6421395	6421396	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	6422455	6422456	1	A	core_nonrep	3	1	1.875
Rue3-1-31	2	6424451	6424452	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	2	6425116	6425117	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	6426975	6426976	3	TTT	core_nonrep	3	1	1
Rue3-1-31	2	6428731	6428732	1	G	core_nonrep	3	1	1
Rue3-1-31	2	6434475	6434476	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6438829	6438830	1	A	core_nonrep	7	1	1
Rue3-1-31	2	6439650	6439651	1	G	core_nonrep	3	1	1
Rue3-1-31	2	6448890	6448891	1	G	core_nonrep	3	1	1
Rue3-1-31	2	6450605	6450606	1	T	core_nonrep	6	1	1
Rue3-1-31	2	6453603	6453604	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	6461406	6461407	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6462966	6462967	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	6474365	6474366	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6474388	6474389	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6477947	6477948	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6478184	6478185	2	TC	core_nonrep	4	1	1
Rue3-1-31	2	6478384	6478385	3	TTA	core_nonrep	3	0.75	1
Rue3-1-31	2	6494211	6494212	1	T	core_nonrep	8	0.777778	1.16667
Rue3-1-31	2	6498666	6498667	2	AT	core_nonrep	3	1	1
Rue3-1-31	2	6501745	6501746	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	6501789	6501790	1	A	nonrep	5	0.714286	1
Rue3-1-31	2	6507508	6507509	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6512418	6512419	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	2	6514630	6514631	2	TC	core_nonrep	12	1	1
Rue3-1-31	2	6514862	6514863	1	G	core_nonrep	14	0.928571	1
Rue3-1-31	2	6514907	6514908	1	A	core_nonrep	10	0.8	1
Rue3-1-31	2	6517794	6517795	1	A	core_nonrep	10	1	1
Rue3-1-31	2	6520860	6520861	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	6521885	6521886	3	CAG	core_nonrep	5	1	1
Rue3-1-31	2	6528438	6528439	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6533458	6533459	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	6547234	6547235	2	TG	nonrep	3	1	1
Rue3-1-31	2	6547532	6547533	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	6549227	6549228	1	A	core_nonrep	6	1	1
Rue3-1-31	2	6555492	6555493	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	6616976	6616977	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6616983	6616984	1	G	core_nonrep	5	1	1
Rue3-1-31	2	6618353	6618354	1	C	core_nonrep	11	1	1
Rue3-1-31	2	6618375	6618376	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	2	6620461	6620462	1	G	core_nonrep	10	1	1
Rue3-1-31	2	6620517	6620518	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	2	6621244	6621245	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	6621248	6621249	1	C	core_nonrep	4	0.8	1
Rue3-1-31	2	6622365	6622366	1	T	core_nonrep	6	1	1
Rue3-1-31	2	6633797	6633798	1	A	nonrep	3	1	1
Rue3-1-31	2	6640516	6640517	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6641123	6641124	1	C	core_nonrep	3	1	1
Rue3-1-31	2	6642277	6642278	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	2	6644186	6644187	1	A	nonrep	3	1	1
Rue3-1-31	2	6647181	6647182	2	CC	core_nonrep	7	0.857143	1
Rue3-1-31	2	6647182	6647183	1	A	core_nonrep	8	1	1
Rue3-1-31	2	6650153	6650154	1	A	core_nonrep	15	1	1
Rue3-1-31	2	6653353	6653354	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6663915	6663916	1	T	core_nonrep	6	1	1
Rue3-1-31	2	6665758	6665759	1	G	core_nonrep	4	1	1
Rue3-1-31	2	6672538	6672539	1	A	core_nonrep	5	1	1
Rue3-1-31	2	6676418	6676419	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	2	6676831	6676832	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6691506	6691507	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	2	6697098	6697099	1	T	core_nonrep	8	1	1
Rue3-1-31	2	6701877	6701878	3	GAA	core_nonrep	10	1	1
Rue3-1-31	2	6702088	6702089	2	AT	core_nonrep	16	1	1
Rue3-1-31	2	6702328	6702329	1	G	core_nonrep	7	1	1
Rue3-1-31	2	6702354	6702355	1	C	core_nonrep	9	0.875	1
Rue3-1-31	2	6702948	6702949	1	T	core_nonrep	7	1	1
Rue3-1-31	2	6703077	6703078	2	AA	core_nonrep	11	0.9	1
Rue3-1-31	2	6731472	6731473	1	G	core_nonrep	9	0.9	1
Rue3-1-31	2	6735099	6735100	2	GT	core_nonrep	4	1	1
Rue3-1-31	2	6735417	6735418	1	G	core_nonrep	7	1	1
Rue3-1-31	2	6743924	6743925	1	C	nonrep	4	0.8	1
Rue3-1-31	2	6765682	6765683	2	TA	core_nonrep	4	1	1
Rue3-1-31	2	6798118	6798119	1	C	core_nonrep	3	1	1
Rue3-1-31	2	6816072	6816073	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	6816672	6816673	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6818613	6818614	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	2	6819963	6819964	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	2	6821074	6821075	2	TC	core_nonrep	8	0.777778	1
Rue3-1-31	2	6843605	6843606	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	2	6845575	6845576	1	A	core_nonrep	25	1	1
Rue3-1-31	2	6848210	6848211	1	A	core_nonrep	11	0.909091	1.11765
Rue3-1-31	2	6850599	6850600	2	CT	core_nonrep	6	0.833333	1
Rue3-1-31	2	6851157	6851158	1	G	core_nonrep	10	0.818182	1
Rue3-1-31	2	6852163	6852164	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6863240	6863241	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	6865617	6865618	1	T	core_nonrep	5	1	1
Rue3-1-31	2	6869352	6869353	1	A	core_nonrep	5	0.75	1
Rue3-1-31	2	6871659	6871660	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6874951	6874952	1	T	core_nonrep	3	1	1
Rue3-1-31	2	6875432	6875433	1	A	core_nonrep	6	1	1
Rue3-1-31	2	6877658	6877659	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6884237	6884238	1	T	core_nonrep	6	1	1
Rue3-1-31	2	6884869	6884870	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	2	6885214	6885215	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	2	6885219	6885220	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	6886196	6886197	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	6893541	6893542	1	C	core_nonrep	6	1	1
Rue3-1-31	2	6895790	6895791	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	6900317	6900318	1	A	core_nonrep	5	1	1
Rue3-1-31	2	6901514	6901515	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	6901789	6901790	1	G	core_nonrep	6	0.8	1
Rue3-1-31	2	6902951	6902952	3	ATT	core_nonrep	3	1	1
Rue3-1-31	2	6904553	6904554	1	A	core_nonrep	3	1	1.8
Rue3-1-31	2	6905744	6905745	2	TC	core_nonrep	11	1	1
Rue3-1-31	2	6910672	6910673	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	6917522	6917523	1	A	core_nonrep	11	0.769231	1.05882
Rue3-1-31	2	6923148	6923149	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6924016	6924017	1	G	nonrep	4	1	1
Rue3-1-31	2	6924154	6924155	1	G	nonrep	3	1	1
Rue3-1-31	2	6924213	6924214	1	G	core_nonrep	4	1	1
Rue3-1-31	2	6940358	6940359	1	A	core_nonrep	9	1	1
Rue3-1-31	2	6945703	6945704	1	G	core_nonrep	3	1	1.2
Rue3-1-31	2	6946860	6946861	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	6949243	6949244	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	6951729	6951730	1	C	core_nonrep	9	1	1
Rue3-1-31	2	6953710	6953711	3	TAG	core_nonrep	5	0.8	1
Rue3-1-31	2	6966016	6966017	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	6971455	6971456	2	TA	core_nonrep	5	1	1
Rue3-1-31	2	6973729	6973730	1	T	nonrep	3	0.75	1
Rue3-1-31	2	6977111	6977112	1	A	core_nonrep	3	1	1
Rue3-1-31	2	6977503	6977504	1	T	core_nonrep	4	1	1
Rue3-1-31	2	6980536	6980537	1	G	core_nonrep	10	0.833333	1
Rue3-1-31	2	6984063	6984064	1	T	core_nonrep	9	0.875	1
Rue3-1-31	2	6985200	6985201	1	C	core_nonrep	3	1	1
Rue3-1-31	2	6985613	6985614	1	T	nonrep	3	0.75	1
Rue3-1-31	2	6987250	6987251	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	6987253	6987254	1	C	core_nonrep	5	1	1
Rue3-1-31	2	6987256	6987257	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	6992803	6992804	1	A	core_nonrep	4	1	1
Rue3-1-31	2	6996427	6996428	1	A	core_nonrep	11	1	1
Rue3-1-31	2	6997174	6997175	2	TT	core_nonrep	4	1	1
Rue3-1-31	2	7001079	7001080	1	T	core_nonrep	6	0.75	1
Rue3-1-31	2	7002849	7002850	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	7009216	7009217	1	T	core_nonrep	7	1	1
Rue3-1-31	2	7014920	7014921	1	T	core_nonrep	8	1	1
Rue3-1-31	2	7024301	7024302	1	T	nonrep	7	0.857143	1.33333
Rue3-1-31	2	7029903	7029904	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7036772	7036773	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	7037063	7037064	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	7038665	7038666	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7039023	7039024	1	T	nonrep	3	1	1
Rue3-1-31	2	7039112	7039113	1	G	core_nonrep	7	1	1
Rue3-1-31	2	7039120	7039121	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	7039702	7039703	1	A	nonrep	3	0.75	1
Rue3-1-31	2	7042208	7042209	1	G	core_nonrep	6	1	1
Rue3-1-31	2	7061853	7061854	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	7063355	7063356	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7072580	7072581	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7077475	7077476	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7078821	7078822	1	A	core_nonrep	6	1	1
Rue3-1-31	2	7079417	7079418	1	C	core_nonrep	10	1	1
Rue3-1-31	2	7079498	7079499	1	T	core_nonrep	7	1	1
Rue3-1-31	2	7086806	7086807	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	7088983	7088984	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	7103722	7103723	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	2	7112161	7112162	1	T	nonrep	3	0.75	1
Rue3-1-31	2	7119849	7119850	1	T	core	3	1	1.33333
Rue3-1-31	2	7125565	7125566	1	G	core_nonrep	13	1	1
Rue3-1-31	2	7133766	7133767	2	AA	core_nonrep	9	0.875	1
Rue3-1-31	2	7152344	7152345	1	G	core_nonrep	10	1	1
Rue3-1-31	2	7163735	7163736	1	T	nonrep	4	1	1
Rue3-1-31	2	7165614	7165615	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7177965	7177966	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	7186622	7186623	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7186889	7186890	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7190415	7190416	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	7195743	7195744	1	T	nonrep	3	0.75	1
Rue3-1-31	2	7200447	7200448	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7200936	7200937	1	T	nonrep	3	1	1
Rue3-1-31	2	7234640	7234641	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	7234660	7234661	1	T	core_nonrep	12	0.888889	1
Rue3-1-31	2	7238910	7238911	1	T	core_nonrep	10	1	1
Rue3-1-31	2	7239240	7239241	1	C	core_nonrep	7	1	1
Rue3-1-31	2	7244025	7244026	1	G	core_nonrep	10	1	1
Rue3-1-31	2	7246115	7246116	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7246746	7246747	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7249137	7249138	1	G	nonrep	3	0.75	1
Rue3-1-31	2	7258769	7258770	1	T	core_nonrep	8	1	1
Rue3-1-31	2	7261224	7261225	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7265630	7265631	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7268088	7268089	2	AT	core_nonrep	10	0.777778	1
Rue3-1-31	2	7273926	7273927	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	7278283	7278284	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	7282063	7282064	1	T	core_nonrep	10	0.8	1
Rue3-1-31	2	7282127	7282128	1	A	core_nonrep	16	1	1
Rue3-1-31	2	7285174	7285175	1	C	core_nonrep	4	1	1
Rue3-1-31	2	7291949	7291950	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	2	7301302	7301303	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7307044	7307045	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	2	7307630	7307631	1	C	core_nonrep	3	1	1.25
Rue3-1-31	2	7329162	7329163	3	TTA	core_nonrep	3	0.75	1
Rue3-1-31	2	7330819	7330820	1	A	core_nonrep	6	1	1
Rue3-1-31	2	7331715	7331716	1	T	core_nonrep	6	1	1
Rue3-1-31	2	7334087	7334088	1	A	nonrep	4	0.8	1
Rue3-1-31	2	7336457	7336458	1	G	core_nonrep	7	1	1
Rue3-1-31	2	7336547	7336548	1	C	core_nonrep	5	1	1
Rue3-1-31	2	7337390	7337391	2	AA	core_nonrep	7	0.75	1
Rue3-1-31	2	7338723	7338724	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	7339517	7339518	2	TT	core_nonrep	6	1	1
Rue3-1-31	2	7341631	7341632	1	G	core_nonrep	24	1	1
Rue3-1-31	2	7351745	7351746	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7356067	7356068	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	2	7359036	7359037	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	7362610	7362611	1	T	core_nonrep	14	1	1
Rue3-1-31	2	7362768	7362769	1	A	core_nonrep	12	0.857143	1
Rue3-1-31	2	7368958	7368959	1	A	core_nonrep	13	0.9	1
Rue3-1-31	2	7375859	7375860	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7388493	7388494	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	7394236	7394237	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7413071	7413072	1	C	core_nonrep	7	1	1
Rue3-1-31	2	7423778	7423779	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7433587	7433588	1	T	core_nonrep	17	1	1
Rue3-1-31	2	7435709	7435710	2	TA	core_nonrep	10	0.714286	1
Rue3-1-31	2	7439128	7439129	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7440254	7440255	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7441852	7441853	1	T	core_nonrep	7	1	1
Rue3-1-31	2	7444095	7444096	1	G	core_nonrep	5	1	1
Rue3-1-31	2	7444710	7444711	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7444921	7444922	1	T	nonrep	3	0.75	1
Rue3-1-31	2	7446900	7446901	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7461554	7461555	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	7461774	7461775	1	A	core_nonrep	6	1	1
Rue3-1-31	2	7488394	7488395	3	CTA	core_nonrep	7	0.777778	1
Rue3-1-31	2	7497892	7497893	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7498713	7498714	1	C	core_nonrep	7	1	1
Rue3-1-31	2	7499124	7499125	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7499302	7499303	2	TA	core_nonrep	4	1	1
Rue3-1-31	2	7500298	7500299	1	A	nonrep	4	0.8	1
Rue3-1-31	2	7501734	7501735	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	7501835	7501836	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	7501848	7501849	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7503677	7503678	1	C	core_nonrep	4	1	1
Rue3-1-31	2	7504314	7504315	1	T	nonrep	4	1	1
Rue3-1-31	2	7504849	7504850	1	T	core_nonrep	8	0.75	1
Rue3-1-31	2	7506399	7506400	1	A	core_nonrep	9	1	1
Rue3-1-31	2	7506643	7506644	1	A	core_nonrep	20	1	1
Rue3-1-31	2	7507667	7507668	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7507668	7507669	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	7507679	7507680	1	T	core_nonrep	8	1	1
Rue3-1-31	2	7508275	7508276	1	T	nonrep	3	0.75	1
Rue3-1-31	2	7509842	7509843	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7511746	7511747	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7514378	7514379	1	T	core_nonrep	7	1	1
Rue3-1-31	2	7517289	7517290	1	G	core_nonrep	8	0.875	1
Rue3-1-31	2	7519287	7519288	1	C	core_nonrep	12	1	1
Rue3-1-31	2	7523298	7523299	1	A	core_nonrep	8	1	1
Rue3-1-31	2	7523640	7523641	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7536382	7536383	1	A	nonrep	3	1	1
Rue3-1-31	2	7537316	7537317	1	G	nonrep	3	1	1
Rue3-1-31	2	7545841	7545842	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7546070	7546071	1	C	core_nonrep	11	1	1
Rue3-1-31	2	7549676	7549677	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	2	7550172	7550173	1	T	core_nonrep	9	1	1
Rue3-1-31	2	7551981	7551982	1	C	core_nonrep	4	1	1
Rue3-1-31	2	7556376	7556377	1	A	nonrep	3	1	1
Rue3-1-31	2	7556478	7556479	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7556987	7556988	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7561336	7561337	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7561346	7561347	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	7561712	7561713	1	A	core_nonrep	11	1	1
Rue3-1-31	2	7561841	7561842	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	7563295	7563296	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	7563297	7563298	1	C	core_nonrep	8	1	1
Rue3-1-31	2	7565072	7565073	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7566098	7566099	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	2	7570975	7570976	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7571331	7571332	1	C	nonrep	3	1	1
Rue3-1-31	2	7571332	7571333	1	C	nonrep	3	1	1
Rue3-1-31	2	7572637	7572638	2	AC	core_nonrep	8	1	1
Rue3-1-31	2	7573299	7573300	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7573540	7573541	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7574767	7574768	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7575491	7575492	1	G	core_nonrep	3	1	1
Rue3-1-31	2	7584305	7584306	1	T	nonrep	4	0.8	1
Rue3-1-31	2	7586472	7586473	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	7586711	7586712	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	7587407	7587408	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	7593934	7593935	1	A	core_nonrep	9	0.875	1
Rue3-1-31	2	7596054	7596055	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7596419	7596420	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7596946	7596947	1	C	core_nonrep	13	1	1
Rue3-1-31	2	7605320	7605321	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	7605321	7605322	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	7611095	7611096	2	TA	core_nonrep	5	1	1
Rue3-1-31	2	7614288	7614289	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	2	7614345	7614346	1	G	core_nonrep	7	1	1
Rue3-1-31	2	7614543	7614544	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7621046	7621047	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7626923	7626924	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7629019	7629020	1	G	core_nonrep	6	1	1
Rue3-1-31	2	7630580	7630581	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	7630608	7630609	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7630611	7630612	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	7634220	7634221	1	T	core_nonrep	12	0.75	1
Rue3-1-31	2	7637712	7637713	1	C	core_nonrep	14	0.916667	1
Rue3-1-31	2	7643928	7643929	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	7644098	7644099	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7646607	7646608	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7647674	7647675	2	TT	nonrep	3	1	1
Rue3-1-31	2	7650252	7650253	1	A	core_nonrep	6	1	1
Rue3-1-31	2	7657455	7657456	1	A	core	3	0.75	1.33333
Rue3-1-31	2	7663871	7663872	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7664580	7664581	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7664753	7664754	1	C	core_nonrep	16	1	1
Rue3-1-31	2	7665112	7665113	1	A	core_nonrep	10	0.75	1
Rue3-1-31	2	7681236	7681237	1	T	core_nonrep	21	0.789474	1
Rue3-1-31	2	7706520	7706521	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7706683	7706684	1	C	core_nonrep	6	1	1
Rue3-1-31	2	7709800	7709801	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	2	7724073	7724074	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7726233	7726234	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	7734632	7734633	1	T	core_nonrep	7	1	1
Rue3-1-31	2	7734633	7734634	1	A	core_nonrep	9	1	1
Rue3-1-31	2	7735634	7735635	1	T	core_nonrep	6	1	1
Rue3-1-31	2	7737915	7737916	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	7738011	7738012	2	CG	core_nonrep	3	1	1
Rue3-1-31	2	7746866	7746867	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7747116	7747117	1	T	core_nonrep	13	1	1
Rue3-1-31	2	7749158	7749159	1	A	nonrep	3	1	1
Rue3-1-31	2	7759995	7759996	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	7772794	7772795	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7814731	7814732	1	T	nonrep	3	1	1
Rue3-1-31	2	7819451	7819452	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	7824615	7824616	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7825148	7825149	1	G	nonrep	3	0.75	1
Rue3-1-31	2	7825414	7825415	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	7843570	7843571	1	T	core_nonrep	6	1	1
Rue3-1-31	2	7847909	7847910	1	A	core_nonrep	8	1	1
Rue3-1-31	2	7852026	7852027	1	G	core_nonrep	5	1	1
Rue3-1-31	2	7853276	7853277	1	T	core_nonrep	6	1	1
Rue3-1-31	2	7854448	7854449	2	AT	core_nonrep	7	1	1
Rue3-1-31	2	7860567	7860568	1	A	core_nonrep	8	1	1
Rue3-1-31	2	7867505	7867506	1	A	core_nonrep	6	1	1
Rue3-1-31	2	7868162	7868163	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	7869630	7869631	2	CG	core_nonrep	5	0.8	1
Rue3-1-31	2	7869874	7869875	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7870034	7870035	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	7874919	7874920	1	T	core_nonrep	5	1	1
Rue3-1-31	2	7885891	7885892	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7891975	7891976	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7892400	7892401	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7896871	7896872	1	A	core_nonrep	5	1	1
Rue3-1-31	2	7896914	7896915	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7898885	7898886	1	A	core_nonrep	4	1	1
Rue3-1-31	2	7901885	7901886	3	AAA	core_nonrep	6	0.75	1
Rue3-1-31	2	7902649	7902650	1	A	core_nonrep	3	1	1
Rue3-1-31	2	7903296	7903297	1	A	nonrep	4	0.8	1
Rue3-1-31	2	7904065	7904066	2	AT	core_nonrep	3	1	1
Rue3-1-31	2	7910629	7910630	1	C	core_nonrep	8	1	1
Rue3-1-31	2	7916924	7916925	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	7917196	7917197	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	7917198	7917199	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	7917201	7917202	1	G	core_nonrep	4	1	1
Rue3-1-31	2	7917254	7917255	1	T	core_nonrep	3	1	1
Rue3-1-31	2	7917920	7917921	2	AT	core_nonrep	4	1	1
Rue3-1-31	2	7919880	7919881	2	GT	core_nonrep	11	0.9	1
Rue3-1-31	2	7930645	7930646	1	T	core_nonrep	4	1	1
Rue3-1-31	2	7934127	7934128	2	GA	core_nonrep	5	1	1.8
Rue3-1-31	2	7939303	7939304	1	A	core_nonrep	12	1	1
Rue3-1-31	2	7940923	7940924	1	T	core_nonrep	17	1	1
Rue3-1-31	2	7952253	7952254	1	A	core_nonrep	7	1	1
Rue3-1-31	2	7983035	7983036	1	T	core_nonrep	3	1	1.125
Rue3-1-31	2	7989444	7989445	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	7989773	7989774	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	8001570	8001571	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	8001572	8001573	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	8001573	8001574	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	8003675	8003676	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	2	8007919	8007920	1	A	core_nonrep	13	0.923077	1
Rue3-1-31	2	8008052	8008053	1	A	core_nonrep	5	1	1
Rue3-1-31	2	8023060	8023061	1	A	core_nonrep	6	1	1
Rue3-1-31	2	8023926	8023927	1	C	core_nonrep	3	1	1
Rue3-1-31	2	8031946	8031947	1	G	core_nonrep	3	1	1
Rue3-1-31	2	8035268	8035269	1	T	nonrep	3	0.75	1
Rue3-1-31	2	8049106	8049107	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	8063834	8063835	1	A	nonrep	3	0.75	1
Rue3-1-31	2	8066763	8066764	1	A	core_nonrep	20	1	1
Rue3-1-31	2	8069708	8069709	3	TAG	core_nonrep	3	0.75	1
Rue3-1-31	2	8076604	8076605	1	T	nonrep	3	0.75	1
Rue3-1-31	2	8080013	8080014	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	8080184	8080185	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	8080563	8080564	1	A	core_nonrep	18	1	1
Rue3-1-31	2	8081295	8081296	1	A	core_nonrep	11	1	1
Rue3-1-31	2	8081357	8081358	1	G	core_nonrep	10	1	1
Rue3-1-31	2	8082809	8082810	1	C	core_nonrep	4	1	1
Rue3-1-31	2	8093217	8093218	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	8093243	8093244	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8099930	8099931	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	8099971	8099972	1	A	core_nonrep	4	1	1
Rue3-1-31	2	8101841	8101842	1	T	core_nonrep	10	1	1
Rue3-1-31	2	8106764	8106765	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8113243	8113244	1	A	core_nonrep	4	1	1
Rue3-1-31	2	8114581	8114582	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	8118162	8118163	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8119641	8119642	1	G	core_nonrep	10	0.714286	1
Rue3-1-31	2	8124799	8124800	1	A	core_nonrep	10	1	1
Rue3-1-31	2	8130905	8130906	1	C	nonrep	4	0.8	1
Rue3-1-31	2	8142050	8142051	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8143985	8143986	2	GT	core_nonrep	10	0.909091	1
Rue3-1-31	2	8145591	8145592	1	G	core_nonrep	8	1	1
Rue3-1-31	2	8146744	8146745	1	G	core_nonrep	10	1	1
Rue3-1-31	2	8154997	8154998	1	T	core_nonrep	9	1	1
Rue3-1-31	2	8164681	8164682	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	8165028	8165029	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	8174441	8174442	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8175738	8175739	1	C	core_nonrep	4	1	1
Rue3-1-31	2	8200232	8200233	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8200283	8200284	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8200544	8200545	1	A	core_nonrep	9	0.75	1
Rue3-1-31	2	8203967	8203968	2	AA	core_nonrep	8	1	1
Rue3-1-31	2	8209342	8209343	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	2	8218127	8218128	2	AG	core_nonrep	9	1	1
Rue3-1-31	2	8222956	8222957	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	8226302	8226303	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	8235835	8235836	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	8240410	8240411	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	8243309	8243310	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8243794	8243795	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8259545	8259546	1	T	nonrep	3	1	1
Rue3-1-31	2	8262648	8262649	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8278321	8278322	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8284597	8284598	1	G	core_nonrep	7	1	1
Rue3-1-31	2	8287443	8287444	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8289245	8289246	1	C	core_nonrep	6	1	1
Rue3-1-31	2	8300733	8300734	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8300824	8300825	1	A	nonrep	3	1	1
Rue3-1-31	2	8304533	8304534	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	8310807	8310808	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	8314595	8314596	1	G	core_nonrep	6	1	1
Rue3-1-31	2	8314832	8314833	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	8319995	8319996	1	A	core_nonrep	5	1	1
Rue3-1-31	2	8320494	8320495	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	2	8325141	8325142	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	8325457	8325458	1	C	core_nonrep	6	1	1
Rue3-1-31	2	8336102	8336103	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	8338729	8338730	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8339268	8339269	1	A	core_nonrep	7	1	1
Rue3-1-31	2	8341742	8341743	1	T	core_nonrep	22	1	1
Rue3-1-31	2	8341762	8341763	1	T	core_nonrep	10	1	1
Rue3-1-31	2	8342428	8342429	1	C	core_nonrep	7	1	1
Rue3-1-31	2	8346835	8346836	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	8347053	8347054	1	C	core_nonrep	11	1	1
Rue3-1-31	2	8349118	8349119	1	C	core_nonrep	13	0.8	1
Rue3-1-31	2	8349120	8349121	2	TT	core_nonrep	15	0.928571	1
Rue3-1-31	2	8350141	8350142	1	C	core_nonrep	3	1	1
Rue3-1-31	2	8358931	8358932	1	G	core_nonrep	15	1	1
Rue3-1-31	2	8358957	8358958	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	2	8360005	8360006	1	G	core_nonrep	4	1	1
Rue3-1-31	2	8361046	8361047	1	A	core_nonrep	8	1	1
Rue3-1-31	2	8375280	8375281	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	8379846	8379847	1	C	nonrep	4	1	1
Rue3-1-31	2	8384512	8384513	1	C	core_nonrep	5	1	1
Rue3-1-31	2	8384558	8384559	1	T	core_nonrep	7	1	1
Rue3-1-31	2	8390481	8390482	1	G	core_nonrep	7	1	1
Rue3-1-31	2	8406077	8406078	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	8406122	8406123	1	T	nonrep	3	1	1
Rue3-1-31	2	8409885	8409886	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	8411768	8411769	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	2	8419656	8419657	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	2	8430259	8430260	3	AAT	core_nonrep	4	1	1
Rue3-1-31	2	8443132	8443133	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	8456759	8456760	1	G	core_nonrep	5	1	1
Rue3-1-31	2	8457627	8457628	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	8458286	8458287	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8459830	8459831	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	8462446	8462447	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	2	8462448	8462449	1	A	core_nonrep	5	1	1
Rue3-1-31	2	8462514	8462515	1	A	nonrep	3	1	1
Rue3-1-31	2	8467085	8467086	1	G	core_nonrep	8	1	1
Rue3-1-31	2	8467092	8467093	1	G	core_nonrep	5	1	1
Rue3-1-31	2	8467698	8467699	1	C	core_nonrep	11	1	1
Rue3-1-31	2	8477047	8477048	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8477651	8477652	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8485228	8485229	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	8487682	8487683	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	2	8487683	8487684	1	A	core_nonrep	11	1	1
Rue3-1-31	2	8490032	8490033	1	T	core_nonrep	7	0.8	1
Rue3-1-31	2	8500245	8500246	1	A	core_nonrep	8	1	1
Rue3-1-31	2	8510265	8510266	1	T	core_nonrep	7	1	1
Rue3-1-31	2	8521482	8521483	1	A	core_nonrep	11	1	1
Rue3-1-31	2	8522831	8522832	1	T	core_nonrep	10	1	1
Rue3-1-31	2	8534823	8534824	2	AA	core_nonrep	8	1	1
Rue3-1-31	2	8535000	8535001	1	A	core_nonrep	16	1	1
Rue3-1-31	2	8535305	8535306	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	8535833	8535834	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	2	8537534	8537535	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	8549326	8549327	2	AA	core_nonrep	6	1	1
Rue3-1-31	2	8549890	8549891	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8564580	8564581	1	T	core_nonrep	12	1	1
Rue3-1-31	2	8566294	8566295	1	A	core_nonrep	7	0.7	1
Rue3-1-31	2	8566657	8566658	1	A	nonrep	9	0.9	1
Rue3-1-31	2	8567740	8567741	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	2	8569334	8569335	1	T	core_nonrep	7	1	1
Rue3-1-31	2	8574066	8574067	1	T	nonrep	3	1	1
Rue3-1-31	2	8577118	8577119	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8582010	8582011	1	G	core_nonrep	6	1	1
Rue3-1-31	2	8582851	8582852	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8583111	8583112	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	2	8610592	8610593	2	CC	core_nonrep	14	0.923077	1
Rue3-1-31	2	8620441	8620442	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	8620442	8620443	1	C	core_nonrep	8	1	1
Rue3-1-31	2	8644333	8644334	2	CA	core_nonrep	15	1	1
Rue3-1-31	2	8644335	8644336	1	G	core_nonrep	13	1	1
Rue3-1-31	2	8644838	8644839	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	8650567	8650568	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8652738	8652739	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8662509	8662510	1	T	nonrep	3	1	1
Rue3-1-31	2	8669866	8669867	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8676041	8676042	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	8677145	8677146	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8681569	8681570	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	8681575	8681576	1	G	core_nonrep	6	1	1
Rue3-1-31	2	8684605	8684606	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8684677	8684678	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	8684679	8684680	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	8684689	8684690	1	C	core_nonrep	5	1	1
Rue3-1-31	2	8699012	8699013	1	T	core_nonrep	9	1	1
Rue3-1-31	2	8704612	8704613	1	T	nonrep	9	0.9	1
Rue3-1-31	2	8708348	8708349	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8708857	8708858	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	8708864	8708865	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	2	8715375	8715376	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	8717142	8717143	1	A	core_nonrep	6	1	1
Rue3-1-31	2	8717535	8717536	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8737180	8737181	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	2	8740707	8740708	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	8742158	8742159	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	8752403	8752404	1	A	core_nonrep	10	0.714286	1
Rue3-1-31	2	8773310	8773311	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8802632	8802633	1	G	core_nonrep	10	1	1
Rue3-1-31	2	8803432	8803433	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	8804111	8804112	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8804112	8804113	1	A	core_nonrep	4	1	1
Rue3-1-31	2	8804880	8804881	1	T	core_nonrep	9	1	1
Rue3-1-31	2	8811853	8811854	1	T	core_nonrep	7	1	1
Rue3-1-31	2	8816705	8816706	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	8816990	8816991	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	8830246	8830247	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	2	8850568	8850569	2	CT	core_nonrep	15	1	1
Rue3-1-31	2	8855040	8855041	1	G	core_nonrep	14	0.916667	1
Rue3-1-31	2	8866499	8866500	1	T	core_nonrep	6	1	1
Rue3-1-31	2	8872734	8872735	2	TG	core_nonrep	10	1	1
Rue3-1-31	2	8873510	8873511	1	T	core_nonrep	13	1	1
Rue3-1-31	2	8879083	8879084	1	A	core_nonrep	3	1	1
Rue3-1-31	2	8879604	8879605	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	8881039	8881040	1	A	core_nonrep	7	1	1
Rue3-1-31	2	8884087	8884088	1	T	core_nonrep	4	1	1
Rue3-1-31	2	8885112	8885113	1	T	core_nonrep	11	1	1
Rue3-1-31	2	8897749	8897750	1	T	nonrep	3	0.75	1
Rue3-1-31	2	8898204	8898205	1	A	core_nonrep	5	1	1
Rue3-1-31	2	8898205	8898206	1	G	core_nonrep	5	1	1
Rue3-1-31	2	8906634	8906635	1	T	core_nonrep	10	1	1
Rue3-1-31	2	8907831	8907832	1	A	core_nonrep	11	1	1
Rue3-1-31	2	8929728	8929729	1	G	core_nonrep	5	1	1
Rue3-1-31	2	8930159	8930160	1	T	core_nonrep	8	1	1
Rue3-1-31	2	8931567	8931568	1	G	core_nonrep	9	0.8	1
Rue3-1-31	2	8934931	8934932	3	TTG	core_nonrep	9	1	1
Rue3-1-31	2	8944718	8944719	2	AT	core_nonrep	7	0.833333	1
Rue3-1-31	2	8946851	8946852	1	A	core_nonrep	6	1	1
Rue3-1-31	2	8948937	8948938	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8951599	8951600	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	8952334	8952335	1	A	core_nonrep	9	1	1
Rue3-1-31	2	8963290	8963291	1	T	core_nonrep	3	1	1
Rue3-1-31	2	8963996	8963997	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	8998893	8998894	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	9008865	9008866	1	G	core_nonrep	11	1	1
Rue3-1-31	2	9013684	9013685	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9013904	9013905	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9014012	9014013	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9022432	9022433	1	A	core_nonrep	13	1	1
Rue3-1-31	2	9042690	9042691	1	G	core_nonrep	9	0.727273	1
Rue3-1-31	2	9042694	9042695	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	2	9044983	9044984	1	A	core_nonrep	6	1	1
Rue3-1-31	2	9046439	9046440	1	C	core_nonrep	5	1	1
Rue3-1-31	2	9046508	9046509	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	2	9055605	9055606	1	T	core_nonrep	10	0.9	1
Rue3-1-31	2	9057178	9057179	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9063497	9063498	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9067530	9067531	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9067537	9067538	1	G	core_nonrep	3	1	1
Rue3-1-31	2	9067693	9067694	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9075751	9075752	1	T	nonrep	9	0.818182	1
Rue3-1-31	2	9099420	9099421	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	9110339	9110340	2	TT	core_nonrep	5	1	1
Rue3-1-31	2	9124653	9124654	1	A	core_nonrep	8	1	1
Rue3-1-31	2	9127238	9127239	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9133575	9133576	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	2	9133581	9133582	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	9133884	9133885	3	ATA	core_nonrep	5	0.714286	1
Rue3-1-31	2	9133910	9133911	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9136352	9136353	1	T	core_nonrep	8	1	1
Rue3-1-31	2	9139393	9139394	1	G	core_nonrep	8	1	1
Rue3-1-31	2	9139758	9139759	1	G	core_nonrep	16	1	1
Rue3-1-31	2	9142133	9142134	1	C	core_nonrep	9	1	1
Rue3-1-31	2	9145719	9145720	1	T	core_nonrep	7	1	1
Rue3-1-31	2	9146509	9146510	1	C	core_nonrep	12	0.857143	1
Rue3-1-31	2	9146510	9146511	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	2	9157350	9157351	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	2	9157352	9157353	1	G	core_nonrep	5	0.8	1
Rue3-1-31	2	9164891	9164892	1	G	core_nonrep	5	1	1
Rue3-1-31	2	9167344	9167345	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9177726	9177727	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	2	9183732	9183733	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	9205007	9205008	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9212554	9212555	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9212624	9212625	1	A	nonrep	3	1	1
Rue3-1-31	2	9213600	9213601	1	T	nonrep	3	1	1
Rue3-1-31	2	9214381	9214382	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9216814	9216815	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	9219966	9219967	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	9223127	9223128	1	T	core_nonrep	8	1	1
Rue3-1-31	2	9241700	9241701	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9241908	9241909	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	9247598	9247599	1	C	core_nonrep	9	1	1
Rue3-1-31	2	9250209	9250210	1	A	core_nonrep	6	1	1
Rue3-1-31	2	9255412	9255413	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	2	9256145	9256146	1	T	nonrep	3	0.75	1
Rue3-1-31	2	9256401	9256402	1	T	core_nonrep	8	1	1
Rue3-1-31	2	9258407	9258408	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9267455	9267456	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9270167	9270168	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	2	9271937	9271938	1	G	core_nonrep	3	1	1
Rue3-1-31	2	9280105	9280106	1	T	core_nonrep	8	1	1
Rue3-1-31	2	9281118	9281119	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9292193	9292194	1	A	core_nonrep	7	1	1
Rue3-1-31	2	9294554	9294555	1	A	core_nonrep	13	1	1
Rue3-1-31	2	9311999	9312000	1	A	core_nonrep	8	1	1
Rue3-1-31	2	9314315	9314316	1	T	core_nonrep	12	1	1
Rue3-1-31	2	9317123	9317124	2	GA	core_nonrep	19	0.904762	1
Rue3-1-31	2	9324899	9324900	1	A	core_nonrep	25	0.833333	1.03571
Rue3-1-31	2	9325383	9325384	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9326754	9326755	2	GA	core_nonrep	11	0.769231	1
Rue3-1-31	2	9327143	9327144	1	T	core_nonrep	9	1	1
Rue3-1-31	2	9329400	9329401	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	9329593	9329594	1	A	core_nonrep	15	0.9375	1
Rue3-1-31	2	9329753	9329754	1	C	core_nonrep	11	0.75	1
Rue3-1-31	2	9329924	9329925	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	9330035	9330036	1	T	nonrep	3	1	1
Rue3-1-31	2	9334024	9334025	2	GA	core_nonrep	3	1	1
Rue3-1-31	2	9334026	9334027	1	G	core_nonrep	3	1	1
Rue3-1-31	2	9334208	9334209	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	2	9336608	9336609	1	T	core_nonrep	8	1	1
Rue3-1-31	2	9344468	9344469	1	A	core_nonrep	7	1	1
Rue3-1-31	2	9344595	9344596	1	G	core_nonrep	12	1	1
Rue3-1-31	2	9346186	9346187	1	A	core_nonrep	5	0.75	1
Rue3-1-31	2	9348439	9348440	2	AT	core_nonrep	9	0.714286	1
Rue3-1-31	2	9351204	9351205	1	C	core_nonrep	5	0.75	1
Rue3-1-31	2	9352190	9352191	1	C	core_nonrep	3	1	1
Rue3-1-31	2	9486649	9486650	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9487036	9487037	1	A	core_nonrep	9	1	1
Rue3-1-31	2	9488165	9488166	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	9491261	9491262	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	9492957	9492958	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9493936	9493937	1	T	nonrep	3	1	1
Rue3-1-31	2	9498724	9498725	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	9525549	9525550	3	TTG	core_nonrep	4	1	1
Rue3-1-31	2	9526139	9526140	1	G	core_nonrep	5	1	1
Rue3-1-31	2	9528604	9528605	1	A	nonrep	6	0.857143	1
Rue3-1-31	2	9530191	9530192	1	G	core_nonrep	10	0.9	1
Rue3-1-31	2	9532881	9532882	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9532989	9532990	1	A	core_nonrep	8	1	1
Rue3-1-31	2	9532992	9532993	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9546904	9546905	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	9548323	9548324	3	ACT	core_nonrep	5	0.714286	1
Rue3-1-31	2	9549404	9549405	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9560488	9560489	1	C	core_nonrep	4	1	1
Rue3-1-31	2	9567416	9567417	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9569573	9569574	2	CA	core_nonrep	9	0.888889	1
Rue3-1-31	2	9570153	9570154	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	9570542	9570543	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	2	9574739	9574740	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9574876	9574877	2	TA	core_nonrep	3	1	1
Rue3-1-31	2	9574990	9574991	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	9575913	9575914	2	TT	core_nonrep	9	0.888889	1
Rue3-1-31	2	9576918	9576919	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9576920	9576921	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9586542	9586543	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	9622358	9622359	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	9631078	9631079	2	GT	core_nonrep	11	0.785714	1
Rue3-1-31	2	9633260	9633261	1	A	core_nonrep	9	1	1
Rue3-1-31	2	9642233	9642234	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9642258	9642259	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9644140	9644141	1	A	core_nonrep	5	1	1
Rue3-1-31	2	9645852	9645853	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9646573	9646574	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9646921	9646922	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	9650047	9650048	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9651718	9651719	3	TGT	core_nonrep	3	1	1
Rue3-1-31	2	9669539	9669540	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9674678	9674679	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	2	9684403	9684404	1	T	core_nonrep	11	1	1
Rue3-1-31	2	9687656	9687657	3	AAC	core_nonrep	3	1	1
Rue3-1-31	2	9688225	9688226	1	C	core_nonrep	3	1	1
Rue3-1-31	2	9688535	9688536	1	A	nonrep	3	1	1
Rue3-1-31	2	9689348	9689349	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	9691048	9691049	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9700511	9700512	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9707725	9707726	1	T	core_nonrep	9	1	1
Rue3-1-31	2	9711058	9711059	1	T	core_nonrep	7	1	1
Rue3-1-31	2	9713397	9713398	1	G	core_nonrep	4	1	1
Rue3-1-31	2	9723491	9723492	1	T	core_nonrep	15	1	1
Rue3-1-31	2	9726366	9726367	2	TA	core_nonrep	9	0.7	1
Rue3-1-31	2	9749419	9749420	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	9761523	9761524	2	TA	core_nonrep	4	1	1.5
Rue3-1-31	2	9761573	9761574	1	T	core_nonrep	7	0.7	1
Rue3-1-31	2	9764042	9764043	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9768302	9768303	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9768588	9768589	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9780154	9780155	1	T	core_nonrep	5	1	1
Rue3-1-31	2	9784987	9784988	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9786021	9786022	1	G	core_nonrep	11	1	1
Rue3-1-31	2	9786043	9786044	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9788189	9788190	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	9788693	9788694	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9791617	9791618	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9803656	9803657	1	T	core_nonrep	3	1	1
Rue3-1-31	2	9805075	9805076	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9841962	9841963	1	A	core_nonrep	11	1	1
Rue3-1-31	2	9850556	9850557	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	2	9852774	9852775	1	A	nonrep	5	0.833333	1
Rue3-1-31	2	9858723	9858724	1	A	core_nonrep	10	1	1
Rue3-1-31	2	9858958	9858959	1	A	core_nonrep	5	0.75	1
Rue3-1-31	2	9859127	9859128	1	C	core_nonrep	10	1	1
Rue3-1-31	2	9859691	9859692	1	A	core_nonrep	5	0.75	1.42857
Rue3-1-31	2	9876257	9876258	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9880627	9880628	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9886162	9886163	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	2	9896408	9896409	1	C	core_nonrep	10	0.9	1
Rue3-1-31	2	9897621	9897622	1	A	nonrep	3	0.75	1
Rue3-1-31	2	9899143	9899144	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	9900346	9900347	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	2	9901618	9901619	1	T	core_nonrep	7	1	1
Rue3-1-31	2	9903310	9903311	1	G	core_nonrep	9	1	1
Rue3-1-31	2	9909622	9909623	2	GG	core_nonrep	4	0.8	1
Rue3-1-31	2	9909625	9909626	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9910128	9910129	1	A	core_nonrep	4	1	1
Rue3-1-31	2	9915555	9915556	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9917483	9917484	1	A	core_nonrep	3	1	1
Rue3-1-31	2	9918690	9918691	1	T	nonrep	3	1	1
Rue3-1-31	2	9919767	9919768	1	A	core_nonrep	6	1	1
Rue3-1-31	2	9944090	9944091	1	T	core_nonrep	6	1	1
Rue3-1-31	2	9947139	9947140	1	C	core_nonrep	6	0.8	1
Rue3-1-31	2	9949797	9949798	1	C	core_nonrep	12	1	1
Rue3-1-31	2	9953756	9953757	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	9953946	9953947	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	9976236	9976237	1	T	core_nonrep	4	1	1
Rue3-1-31	2	9985656	9985657	1	A	core_nonrep	14	1	1
Rue3-1-31	2	9987473	9987474	1	T	nonrep	4	1	1
Rue3-1-31	2	9987802	9987803	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	9988030	9988031	1	A	core_nonrep	6	1	1
Rue3-1-31	2	9993291	9993292	3	TAA	core_nonrep	5	0.833333	1
Rue3-1-31	2	9993706	9993707	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	9994210	9994211	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	2	9994590	9994591	1	G	core_nonrep	4	1	1
Rue3-1-31	2	9995067	9995068	2	TG	nonrep	4	1	1
Rue3-1-31	2	9997313	9997314	1	A	core_nonrep	11	1	1
Rue3-1-31	2	10027641	10027642	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	10048277	10048278	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10055649	10055650	1	G	core_nonrep	4	1	1
Rue3-1-31	2	10059351	10059352	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	10061650	10061651	1	A	core_nonrep	13	1	1
Rue3-1-31	2	10061651	10061652	1	T	core_nonrep	14	0.909091	1
Rue3-1-31	2	10062436	10062437	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	2	10062596	10062597	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	2	10063694	10063695	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10065865	10065866	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10067242	10067243	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	2	10082399	10082400	1	T	core_nonrep	18	0.923077	1
Rue3-1-31	2	10084408	10084409	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	10086745	10086746	1	C	core_nonrep	4	1	1
Rue3-1-31	2	10087915	10087916	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	10087916	10087917	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10120479	10120480	1	C	core_nonrep	4	1	1
Rue3-1-31	2	10120843	10120844	1	T	core_nonrep	3	1	1
Rue3-1-31	2	10121094	10121095	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	10126301	10126302	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10126475	10126476	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	10129335	10129336	1	T	nonrep	3	0.75	1
Rue3-1-31	2	10130290	10130291	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10137091	10137092	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	10143773	10143774	1	G	core_nonrep	8	1	1
Rue3-1-31	2	10150512	10150513	1	T	nonrep	3	0.75	1
Rue3-1-31	2	10150513	10150514	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10150514	10150515	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10154180	10154181	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10156263	10156264	1	T	core_nonrep	12	1	1
Rue3-1-31	2	10159614	10159615	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	10165102	10165103	1	T	core_nonrep	5	1	1
Rue3-1-31	2	10167161	10167162	1	A	core_nonrep	10	1	1
Rue3-1-31	2	10171447	10171448	2	TC	core_nonrep	5	1	1
Rue3-1-31	2	10184764	10184765	1	C	core_nonrep	4	0.75	1
Rue3-1-31	2	10185296	10185297	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	10185301	10185302	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	10188462	10188463	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	10198700	10198701	1	T	core_nonrep	10	1	1
Rue3-1-31	2	10211566	10211567	1	T	core_nonrep	11	1	1
Rue3-1-31	2	10211898	10211899	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10213403	10213404	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10214536	10214537	2	GT	core_nonrep	5	1	1
Rue3-1-31	2	10215711	10215712	1	A	nonrep	3	1	1
Rue3-1-31	2	10217320	10217321	1	T	nonrep	3	0.75	1
Rue3-1-31	2	10247022	10247023	1	G	core_nonrep	3	1	1
Rue3-1-31	2	10275192	10275193	2	CA	core_nonrep	13	1	1
Rue3-1-31	2	10278754	10278755	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	10284672	10284673	2	AC	core_nonrep	7	0.75	1
Rue3-1-31	2	10287202	10287203	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10287476	10287477	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	10287513	10287514	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10287548	10287549	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10287556	10287557	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10289880	10289881	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	2	10291622	10291623	1	A	core_nonrep	13	1	1
Rue3-1-31	2	10293296	10293297	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10294006	10294007	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10297678	10297679	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	10306897	10306898	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10315945	10315946	1	T	core_nonrep	7	1	1
Rue3-1-31	2	10316234	10316235	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	10321874	10321875	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	10322951	10322952	1	G	core_nonrep	8	1	1
Rue3-1-31	2	10322952	10322953	1	A	core_nonrep	8	1	1
Rue3-1-31	2	10332867	10332868	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10336344	10336345	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10336516	10336517	1	G	core_nonrep	6	1	1
Rue3-1-31	2	10337647	10337648	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10338216	10338217	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10340660	10340661	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	10349454	10349455	1	T	core_nonrep	17	1	1
Rue3-1-31	2	10349794	10349795	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	2	10350685	10350686	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	10350687	10350688	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10357282	10357283	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10362631	10362632	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	10373385	10373386	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	10381987	10381988	1	T	core_nonrep	7	1	1
Rue3-1-31	2	10384826	10384827	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10401644	10401645	1	C	core_nonrep	12	0.785714	1
Rue3-1-31	2	10401645	10401646	2	GT	core_nonrep	13	0.785714	1
Rue3-1-31	2	10404433	10404434	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	10406002	10406003	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10412864	10412865	1	T	core_nonrep	4	1	1
Rue3-1-31	2	10416433	10416434	1	A	core_nonrep	9	1	1
Rue3-1-31	2	10417709	10417710	1	T	core_nonrep	4	1	1
Rue3-1-31	2	10425279	10425280	1	C	core_nonrep	13	0.846154	1
Rue3-1-31	2	10425281	10425282	1	T	core_nonrep	14	0.923077	1
Rue3-1-31	2	10427157	10427158	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10431791	10431792	1	G	core_nonrep	15	1	1
Rue3-1-31	2	10434749	10434750	2	AA	core_nonrep	5	0.75	1
Rue3-1-31	2	10435326	10435327	1	T	core_nonrep	15	1	1
Rue3-1-31	2	10444734	10444735	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	10445548	10445549	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	10468543	10468544	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	2	10494728	10494729	1	T	core_nonrep	4	1	1
Rue3-1-31	2	10499441	10499442	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10504096	10504097	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	10504219	10504220	1	A	core_nonrep	12	1	1
Rue3-1-31	2	10506462	10506463	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	2	10507459	10507460	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	10507772	10507773	1	A	core_nonrep	8	1	1
Rue3-1-31	2	10511352	10511353	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10511964	10511965	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10512229	10512230	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10512236	10512237	1	T	core_nonrep	8	1	1
Rue3-1-31	2	10513298	10513299	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10513337	10513338	1	T	core_nonrep	3	1	1
Rue3-1-31	2	10513671	10513672	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	10515255	10515256	1	A	core_nonrep	9	1	1
Rue3-1-31	2	10517800	10517801	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	10518657	10518658	1	T	nonrep	3	0.75	1
Rue3-1-31	2	10528075	10528076	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10529307	10529308	1	C	core_nonrep	7	1	1
Rue3-1-31	2	10535189	10535190	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10535452	10535453	1	A	nonrep	6	1	1
Rue3-1-31	2	10567706	10567707	2	GA	core_nonrep	3	1	1
Rue3-1-31	2	10568921	10568922	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10570077	10570078	1	G	core_nonrep	13	1	1
Rue3-1-31	2	10572668	10572669	1	C	core_nonrep	5	1	1
Rue3-1-31	2	10574002	10574003	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10577153	10577154	1	C	core_nonrep	5	1	1
Rue3-1-31	2	10587470	10587471	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	10589529	10589530	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	10590324	10590325	1	C	core_nonrep	5	1	1
Rue3-1-31	2	10595690	10595691	1	T	core_nonrep	3	1	1
Rue3-1-31	2	10616524	10616525	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	2	10616975	10616976	2	CC	core_nonrep	4	1	1
Rue3-1-31	2	10617399	10617400	3	CTT	core_nonrep	6	0.857143	1
Rue3-1-31	2	10619480	10619481	1	G	core_nonrep	13	1	1
Rue3-1-31	2	10619938	10619939	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10633327	10633328	1	T	core_nonrep	5	1	1
Rue3-1-31	2	10642950	10642951	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	10654785	10654786	1	A	core_nonrep	3	1	1.57143
Rue3-1-31	2	10672560	10672561	1	A	core_nonrep	10	1	1
Rue3-1-31	2	10685149	10685150	1	C	nonrep	3	1	1
Rue3-1-31	2	10696283	10696284	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10696763	10696764	2	AG	core_nonrep	4	1	1
Rue3-1-31	2	10711978	10711979	1	G	core_nonrep	5	1	1
Rue3-1-31	2	10711988	10711989	1	G	nonrep	4	0.8	1
Rue3-1-31	2	10713388	10713389	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	10732509	10732510	1	G	core_nonrep	16	0.923077	1
Rue3-1-31	2	10738369	10738370	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	10739882	10739883	1	C	core_nonrep	23	1	1
Rue3-1-31	2	10742123	10742124	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	2	10744925	10744926	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	10746013	10746014	1	G	core_nonrep	6	0.75	1
Rue3-1-31	2	10746979	10746980	1	T	core_nonrep	4	1	1
Rue3-1-31	2	10747510	10747511	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	2	10747682	10747683	1	T	core_nonrep	7	1	1
Rue3-1-31	2	10748451	10748452	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10749233	10749234	1	T	nonrep	5	1	1
Rue3-1-31	2	10751331	10751332	1	T	core_nonrep	6	1	1
Rue3-1-31	2	10758418	10758419	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	2	10760886	10760887	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10760937	10760938	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10763889	10763890	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10766873	10766874	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	10771357	10771358	1	T	core_nonrep	5	1	1
Rue3-1-31	2	10772934	10772935	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	10777695	10777696	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10777909	10777910	1	T	core_nonrep	4	1	1
Rue3-1-31	2	10779416	10779417	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	10779653	10779654	1	A	core_nonrep	8	1	1
Rue3-1-31	2	10781371	10781372	1	T	core_nonrep	5	1	1
Rue3-1-31	2	10782411	10782412	1	G	core_nonrep	3	1	1
Rue3-1-31	2	10783922	10783923	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	10784335	10784336	1	T	core_nonrep	8	1	1
Rue3-1-31	2	10784440	10784441	1	T	core_nonrep	9	1	1
Rue3-1-31	2	10784988	10784989	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10785462	10785463	1	T	core_nonrep	10	1	1
Rue3-1-31	2	10788995	10788996	1	T	core_nonrep	7	1	1
Rue3-1-31	2	10789374	10789375	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10789436	10789437	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10795511	10795512	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	10795700	10795701	1	G	core_nonrep	3	1	1
Rue3-1-31	2	10801352	10801353	1	T	nonrep	3	1	1
Rue3-1-31	2	10801802	10801803	1	A	core_nonrep	8	1	1
Rue3-1-31	2	10801994	10801995	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	10804466	10804467	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	10832568	10832569	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10834048	10834049	1	C	core_nonrep	10	0.857143	1
Rue3-1-31	2	10834326	10834327	1	T	core_nonrep	22	0.894737	1
Rue3-1-31	2	10838754	10838755	1	C	core	3	1	1.375
Rue3-1-31	2	10839019	10839020	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10843617	10843618	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	10849628	10849629	1	A	nonrep	3	1	1
Rue3-1-31	2	10849637	10849638	1	A	nonrep	3	0.75	1
Rue3-1-31	2	10853684	10853685	1	A	core_nonrep	3	1	1
Rue3-1-31	2	10853738	10853739	1	A	nonrep	3	1	1
Rue3-1-31	2	10861811	10861812	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	10862285	10862286	3	TAA	core_nonrep	5	0.8	1
Rue3-1-31	2	10862687	10862688	1	A	nonrep	3	0.75	1
Rue3-1-31	2	10864181	10864182	1	T	core_nonrep	11	1	1
Rue3-1-31	2	10864270	10864271	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	10867361	10867362	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	2	10867421	10867422	1	A	nonrep	3	1	1
Rue3-1-31	2	10867476	10867477	1	G	nonrep	3	1	1
Rue3-1-31	2	10880848	10880849	1	A	core_nonrep	5	1	1
Rue3-1-31	2	10898947	10898948	1	G	core_nonrep	11	1	1
Rue3-1-31	2	10898948	10898949	1	T	core_nonrep	16	0.769231	1
Rue3-1-31	2	10903289	10903290	1	C	core_nonrep	15	1	1
Rue3-1-31	2	10909819	10909820	1	C	core_nonrep	9	1	1
Rue3-1-31	2	10910946	10910947	1	G	core_nonrep	4	1	1
Rue3-1-31	2	10913440	10913441	1	A	core_nonrep	7	1	1
Rue3-1-31	2	10946953	10946954	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	2	10951066	10951067	1	A	core_nonrep	4	1	1
Rue3-1-31	2	10952040	10952041	1	A	core_nonrep	6	1	1
Rue3-1-31	2	10962659	10962660	1	A	core_nonrep	12	1	1
Rue3-1-31	2	10981684	10981685	1	A	core_nonrep	8	1	1
Rue3-1-31	2	10994877	10994878	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11001297	11001298	1	G	core_nonrep	7	1	1
Rue3-1-31	2	11049994	11049995	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	11051959	11051960	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11052105	11052106	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11061214	11061215	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	11063200	11063201	1	A	nonrep	4	0.8	1
Rue3-1-31	2	11063958	11063959	1	C	core_nonrep	6	1	1
Rue3-1-31	2	11065146	11065147	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	11076837	11076838	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	11083350	11083351	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11083351	11083352	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11090657	11090658	2	TT	core_nonrep	6	1	1
Rue3-1-31	2	11098364	11098365	1	T	core_nonrep	4	1	1
Rue3-1-31	2	11101692	11101693	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	11109069	11109070	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11122073	11122074	1	T	core_nonrep	6	1	1
Rue3-1-31	2	11122099	11122100	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	2	11129265	11129266	1	G	core_nonrep	4	0.8	1.14286
Rue3-1-31	2	11144343	11144344	1	G	core_nonrep	10	0.875	1
Rue3-1-31	2	11154341	11154342	1	A	nonrep	3	0.75	1
Rue3-1-31	2	11155398	11155399	1	C	core_nonrep	7	1	1
Rue3-1-31	2	11168002	11168003	1	G	nonrep	3	0.75	1
Rue3-1-31	2	11180136	11180137	1	T	core_nonrep	16	1	1
Rue3-1-31	2	11181417	11181418	1	T	core_nonrep	3	1	1.14286
Rue3-1-31	2	11190447	11190448	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11195108	11195109	1	T	nonrep	10	0.714286	1
Rue3-1-31	2	11195898	11195899	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	2	11196127	11196128	1	A	core_nonrep	10	1	1
Rue3-1-31	2	11196810	11196811	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11208594	11208595	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	11227748	11227749	1	T	core_nonrep	5	1	1
Rue3-1-31	2	11233517	11233518	1	T	core_nonrep	4	1	1
Rue3-1-31	2	11235985	11235986	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	2	11238241	11238242	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	11238749	11238750	1	G	nonrep	3	0.75	1
Rue3-1-31	2	11240477	11240478	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	2	11241245	11241246	1	A	core_nonrep	7	0.75	1
Rue3-1-31	2	11241246	11241247	1	T	core_nonrep	8	1	1
Rue3-1-31	2	11245212	11245213	1	T	core_nonrep	7	1	1
Rue3-1-31	2	11245521	11245522	1	T	core_nonrep	8	1	1
Rue3-1-31	2	11256815	11256816	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	11256818	11256819	1	C	core_nonrep	5	0.75	1
Rue3-1-31	2	11265507	11265508	1	C	core_nonrep	7	1	1
Rue3-1-31	2	11265621	11265622	1	A	nonrep	3	0.75	1
Rue3-1-31	2	11266325	11266326	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11267200	11267201	2	AT	core_nonrep	15	1	1
Rue3-1-31	2	11268508	11268509	1	G	core_nonrep	6	1	1
Rue3-1-31	2	11270541	11270542	2	CT	core_nonrep	6	0.833333	1
Rue3-1-31	2	11270869	11270870	1	G	core_nonrep	4	1	1
Rue3-1-31	2	11271513	11271514	2	TT	core_nonrep	8	0.7	1
Rue3-1-31	2	11272941	11272942	1	T	core_nonrep	4	1	1
Rue3-1-31	2	11275025	11275026	1	T	core_nonrep	6	1	1
Rue3-1-31	2	11286349	11286350	1	T	nonrep	5	0.714286	1
Rue3-1-31	2	11286642	11286643	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	11286644	11286645	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11287611	11287612	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	2	11289640	11289641	3	TCG	core_nonrep	3	1	1
Rue3-1-31	2	11299351	11299352	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	2	11300671	11300672	1	T	core_nonrep	8	1	1
Rue3-1-31	2	11300715	11300716	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11304106	11304107	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11306424	11306425	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	11311568	11311569	1	A	core_nonrep	3	1	1
Rue3-1-31	2	11315235	11315236	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	11318219	11318220	1	A	core_nonrep	9	1	1
Rue3-1-31	2	11345870	11345871	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	11362641	11362642	1	T	core_nonrep	8	1	1
Rue3-1-31	2	11364303	11364304	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11366779	11366780	1	G	core_nonrep	10	1	1
Rue3-1-31	2	11370518	11370519	1	T	core_nonrep	4	1	1
Rue3-1-31	2	11373158	11373159	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11374552	11374553	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	11376301	11376302	1	A	core_nonrep	8	1	1
Rue3-1-31	2	11376399	11376400	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	11378855	11378856	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	11380356	11380357	1	G	core_nonrep	5	1	1
Rue3-1-31	2	11380833	11380834	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	11390932	11390933	1	T	core_nonrep	10	1	1
Rue3-1-31	2	11398987	11398988	1	C	core_nonrep	4	1	1
Rue3-1-31	2	11407934	11407935	1	C	nonrep	3	1	1
Rue3-1-31	2	11416055	11416056	1	A	core_nonrep	10	1	1
Rue3-1-31	2	11441002	11441003	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	11441003	11441004	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	2	11441004	11441005	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	11487087	11487088	1	T	nonrep	4	1	1
Rue3-1-31	2	11506492	11506493	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11507429	11507430	3	AAC	core_nonrep	5	0.833333	1
Rue3-1-31	2	11516164	11516165	1	T	nonrep	3	0.75	1
Rue3-1-31	2	11516202	11516203	1	G	core_nonrep	8	1	1
Rue3-1-31	2	11516526	11516527	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	2	11516743	11516744	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11516751	11516752	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11519075	11519076	1	T	core_nonrep	5	1	1
Rue3-1-31	2	11523930	11523931	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11524323	11524324	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11540527	11540528	1	T	nonrep	3	0.75	1
Rue3-1-31	2	11549601	11549602	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	11553327	11553328	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	11556906	11556907	1	T	nonrep	4	0.8	1
Rue3-1-31	2	11564758	11564759	2	GG	core_nonrep	6	1	1.07143
Rue3-1-31	2	11565122	11565123	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	11583023	11583024	2	AA	core_nonrep	9	0.777778	1
Rue3-1-31	2	11590927	11590928	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	2	11592881	11592882	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11599459	11599460	1	T	core_nonrep	10	1	1
Rue3-1-31	2	11622049	11622050	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11625044	11625045	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	11629253	11629254	1	A	core_nonrep	10	0.8	1
Rue3-1-31	2	11651227	11651228	1	T	core_nonrep	9	0.875	1
Rue3-1-31	2	11653197	11653198	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11673575	11673576	1	A	nonrep	5	0.714286	1
Rue3-1-31	2	11680574	11680575	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11680677	11680678	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	11693226	11693227	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11693316	11693317	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	11697614	11697615	1	T	core_nonrep	8	0.8	1
Rue3-1-31	2	11699694	11699695	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	11701698	11701699	1	G	core_nonrep	10	1	1
Rue3-1-31	2	11712035	11712036	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	11712535	11712536	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11713028	11713029	1	T	nonrep	4	0.8	1
Rue3-1-31	2	11714674	11714675	1	T	core_nonrep	22	1	1
Rue3-1-31	2	11717305	11717306	2	AA	nonrep	3	0.75	1
Rue3-1-31	2	11724217	11724218	2	AC	core_nonrep	11	1	1
Rue3-1-31	2	11725179	11725180	1	T	core_nonrep	5	1	1
Rue3-1-31	2	11725191	11725192	1	G	core_nonrep	4	1	1
Rue3-1-31	2	11728048	11728049	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11728052	11728053	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	11728618	11728619	2	TA	core_nonrep	6	1	1
Rue3-1-31	2	11735186	11735187	1	T	core_nonrep	7	1	1
Rue3-1-31	2	11738458	11738459	2	CG	core_nonrep	5	1	1
Rue3-1-31	2	11738721	11738722	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	11740578	11740579	1	G	core_nonrep	7	1	1
Rue3-1-31	2	11742683	11742684	1	C	core_nonrep	6	1	1
Rue3-1-31	2	11743352	11743353	1	C	core_nonrep	4	1	1
Rue3-1-31	2	11744709	11744710	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	11746844	11746845	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11747595	11747596	1	T	core_nonrep	8	1	1
Rue3-1-31	2	11756134	11756135	1	C	core_nonrep	14	1	1
Rue3-1-31	2	11757231	11757232	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11757324	11757325	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11757328	11757329	1	C	core_nonrep	4	1	1
Rue3-1-31	2	11765123	11765124	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	11770297	11770298	1	A	nonrep	3	0.75	1
Rue3-1-31	2	11774150	11774151	2	TT	core_nonrep	5	1	1
Rue3-1-31	2	11776422	11776423	1	T	core_nonrep	7	1	1
Rue3-1-31	2	11781607	11781608	2	AT	core_nonrep	8	1	1
Rue3-1-31	2	11782079	11782080	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11783142	11783143	1	T	core_nonrep	7	1	1
Rue3-1-31	2	11784573	11784574	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	2	11801415	11801416	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	11802005	11802006	1	A	core_nonrep	4	1	1
Rue3-1-31	2	11804602	11804603	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11807958	11807959	2	AG	core_nonrep	6	0.8	1
Rue3-1-31	2	11811053	11811054	1	C	core_nonrep	10	1	1
Rue3-1-31	2	11813676	11813677	1	T	core_nonrep	7	1	1
Rue3-1-31	2	11819346	11819347	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	11819347	11819348	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	11827002	11827003	1	C	core_nonrep	11	0.9	1
Rue3-1-31	2	11830742	11830743	1	T	core_nonrep	8	0.8	1
Rue3-1-31	2	11835434	11835435	2	AT	core_nonrep	5	0.833333	1
Rue3-1-31	2	11835845	11835846	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	11835846	11835847	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	11836419	11836420	1	A	core_nonrep	3	1	1
Rue3-1-31	2	11837531	11837532	1	A	core_nonrep	3	1	1
Rue3-1-31	2	11841901	11841902	1	A	core_nonrep	6	1	1
Rue3-1-31	2	11843422	11843423	1	A	core_nonrep	3	1	1
Rue3-1-31	2	11846918	11846919	1	A	core_nonrep	5	1	1
Rue3-1-31	2	11860878	11860879	1	G	core_nonrep	11	0.909091	1
Rue3-1-31	2	11875566	11875567	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	2	11875736	11875737	1	C	core_nonrep	4	1	1
Rue3-1-31	2	11875835	11875836	1	A	core_nonrep	9	1	1
Rue3-1-31	2	11877357	11877358	1	A	core_nonrep	7	1	1
Rue3-1-31	2	11878361	11878362	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	11887145	11887146	1	T	core_nonrep	14	0.705882	1
Rue3-1-31	2	11895393	11895394	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	11900788	11900789	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	11942911	11942912	1	G	core_nonrep	8	1	1
Rue3-1-31	2	11956045	11956046	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	11973800	11973801	1	T	nonrep	3	0.75	1
Rue3-1-31	2	11976794	11976795	1	C	core_nonrep	11	0.8	1
Rue3-1-31	2	11987547	11987548	1	T	core_nonrep	3	1	1
Rue3-1-31	2	11991133	11991134	2	AA	core_nonrep	5	1	1
Rue3-1-31	2	11995660	11995661	1	T	nonrep	3	1	1
Rue3-1-31	2	12002255	12002256	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	12038251	12038252	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	12040419	12040420	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12047302	12047303	2	TA	core_nonrep	13	1	1
Rue3-1-31	2	12049177	12049178	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	12085217	12085218	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	12092912	12092913	1	T	nonrep	6	0.857143	1
Rue3-1-31	2	12093288	12093289	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12093289	12093290	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12106761	12106762	1	A	nonrep	4	1	1
Rue3-1-31	2	12107840	12107841	1	T	core_nonrep	8	0.75	1
Rue3-1-31	2	12110147	12110148	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12113640	12113641	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	2	12114935	12114936	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12114942	12114943	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	2	12118522	12118523	2	TA	core_nonrep	3	1	1
Rue3-1-31	2	12122560	12122561	1	T	core_nonrep	12	0.833333	1
Rue3-1-31	2	12124789	12124790	1	T	nonrep	3	1	1
Rue3-1-31	2	12125081	12125082	1	T	core_nonrep	9	0.9	1
Rue3-1-31	2	12130965	12130966	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12138379	12138380	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	12151594	12151595	1	T	core_nonrep	9	1	1
Rue3-1-31	2	12152726	12152727	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12153695	12153696	1	C	core_nonrep	6	1	1
Rue3-1-31	2	12153696	12153697	1	G	core_nonrep	7	0.8	1
Rue3-1-31	2	12156182	12156183	1	G	core_nonrep	11	1	1
Rue3-1-31	2	12159139	12159140	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12159142	12159143	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12161188	12161189	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	12171644	12171645	1	T	nonrep	3	1	1
Rue3-1-31	2	12171789	12171790	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12175892	12175893	1	A	core_nonrep	14	0.909091	1
Rue3-1-31	2	12179608	12179609	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	12182798	12182799	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12183372	12183373	2	AA	core_nonrep	7	0.777778	1
Rue3-1-31	2	12183379	12183380	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	12183588	12183589	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12189573	12189574	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	12189575	12189576	1	C	core_nonrep	3	1	1
Rue3-1-31	2	12191580	12191581	1	G	core_nonrep	8	1	1
Rue3-1-31	2	12207364	12207365	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12213195	12213196	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12213358	12213359	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12213961	12213962	2	AT	core_nonrep	7	1	1
Rue3-1-31	2	12216198	12216199	1	C	nonrep	3	0.75	1
Rue3-1-31	2	12225005	12225006	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	12238052	12238053	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12247308	12247309	1	T	core_nonrep	11	1	1
Rue3-1-31	2	12251503	12251504	1	A	core_nonrep	5	1	1
Rue3-1-31	2	12266950	12266951	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	12282356	12282357	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	12288680	12288681	1	T	core_nonrep	3	1	1
Rue3-1-31	2	12298284	12298285	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	12298329	12298330	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	2	12298867	12298868	1	A	nonrep	6	0.75	1
Rue3-1-31	2	12300214	12300215	1	T	core_nonrep	3	1	1
Rue3-1-31	2	12300749	12300750	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	12306551	12306552	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12307411	12307412	2	AC	core_nonrep	4	1	1
Rue3-1-31	2	12308881	12308882	1	A	core_nonrep	9	1	1
Rue3-1-31	2	12310387	12310388	1	A	core_nonrep	7	1	1
Rue3-1-31	2	12316868	12316869	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12331132	12331133	1	A	nonrep	5	0.714286	1
Rue3-1-31	2	12337796	12337797	3	TCT	core_nonrep	4	1	1
Rue3-1-31	2	12351250	12351251	2	AC	core_nonrep	5	1	1
Rue3-1-31	2	12358192	12358193	1	G	core_nonrep	5	1	1
Rue3-1-31	2	12358194	12358195	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12360625	12360626	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12362849	12362850	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12367619	12367620	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	12368360	12368361	1	A	core_nonrep	5	1	1
Rue3-1-31	2	12375451	12375452	1	A	core_nonrep	7	1	1
Rue3-1-31	2	12378907	12378908	1	G	core_nonrep	13	1	1
Rue3-1-31	2	12381339	12381340	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12381880	12381881	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	12383916	12383917	2	AT	nonrep	5	0.714286	1
Rue3-1-31	2	12388475	12388476	1	A	core_nonrep	9	1	1
Rue3-1-31	2	12392119	12392120	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12392139	12392140	1	G	core_nonrep	9	1	1
Rue3-1-31	2	12392179	12392180	1	T	nonrep	3	0.75	1
Rue3-1-31	2	12395065	12395066	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12397579	12397580	1	A	nonrep	4	1	1
Rue3-1-31	2	12397755	12397756	2	TA	core_nonrep	4	1	1
Rue3-1-31	2	12397789	12397790	1	G	core_nonrep	4	1	1
Rue3-1-31	2	12397978	12397979	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	2	12399494	12399495	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	12400758	12400759	1	A	core_nonrep	14	1	1.11111
Rue3-1-31	2	12401237	12401238	2	TA	core_nonrep	7	1	1
Rue3-1-31	2	12402566	12402567	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12418011	12418012	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12422620	12422621	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12424229	12424230	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12424478	12424479	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	12426942	12426943	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12431566	12431567	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	12432932	12432933	1	A	core_nonrep	11	1	1
Rue3-1-31	2	12436464	12436465	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12436489	12436490	1	C	nonrep	6	1	1
Rue3-1-31	2	12437114	12437115	1	A	core_nonrep	14	0.857143	1
Rue3-1-31	2	12438537	12438538	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12438588	12438589	1	A	core_nonrep	5	1	1
Rue3-1-31	2	12440329	12440330	1	T	core_nonrep	14	1	1
Rue3-1-31	2	12442194	12442195	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	12443418	12443419	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	12444342	12444343	1	C	core_nonrep	3	1	1
Rue3-1-31	2	12451143	12451144	1	T	nonrep	3	1	1
Rue3-1-31	2	12451377	12451378	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	2	12451378	12451379	1	A	core_nonrep	13	0.923077	1
Rue3-1-31	2	12453256	12453257	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12473674	12473675	1	A	core_nonrep	18	1	1
Rue3-1-31	2	12475937	12475938	1	C	core_nonrep	9	1	1
Rue3-1-31	2	12476606	12476607	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	2	12480640	12480641	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	12503502	12503503	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12515158	12515159	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12522323	12522324	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12524741	12524742	1	T	core_nonrep	8	1	1
Rue3-1-31	2	12531718	12531719	1	T	nonrep	4	0.8	1
Rue3-1-31	2	12536315	12536316	1	C	core_nonrep	4	1	1
Rue3-1-31	2	12536793	12536794	2	TA	core_nonrep	8	1	1
Rue3-1-31	2	12537533	12537534	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12541976	12541977	1	G	core_nonrep	11	0.857143	1
Rue3-1-31	2	12542707	12542708	2	CA	core_nonrep	11	1	1
Rue3-1-31	2	12543802	12543803	1	T	core_nonrep	16	1	1
Rue3-1-31	2	12545984	12545985	1	A	core_nonrep	7	0.875	1
Rue3-1-31	2	12549595	12549596	1	T	nonrep	5	0.714286	1
Rue3-1-31	2	12549629	12549630	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12556930	12556931	1	T	core_nonrep	6	1	1
Rue3-1-31	2	12588017	12588018	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12593149	12593150	1	G	core_nonrep	12	1	1
Rue3-1-31	2	12604612	12604613	1	G	core_nonrep	10	1	1
Rue3-1-31	2	12610158	12610159	1	G	core_nonrep	5	1	1
Rue3-1-31	2	12615644	12615645	1	G	core_nonrep	10	1	1
Rue3-1-31	2	12626443	12626444	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12630130	12630131	1	T	core_nonrep	5	1	1
Rue3-1-31	2	12644945	12644946	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12647539	12647540	1	A	core_nonrep	23	0.944444	1
Rue3-1-31	2	12652477	12652478	1	C	core_nonrep	6	0.8	1
Rue3-1-31	2	12653539	12653540	1	G	core_nonrep	8	1	1
Rue3-1-31	2	12656056	12656057	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	2	12658794	12658795	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	12659238	12659239	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	12661470	12661471	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12664837	12664838	1	T	core_nonrep	16	1	1
Rue3-1-31	2	12667900	12667901	1	A	nonrep	3	1	1
Rue3-1-31	2	12674793	12674794	1	C	core_nonrep	7	1	1
Rue3-1-31	2	12683246	12683247	1	A	core_nonrep	8	0.75	1
Rue3-1-31	2	12683502	12683503	1	G	core_nonrep	11	1	1
Rue3-1-31	2	12683701	12683702	2	TT	core_nonrep	6	1	1
Rue3-1-31	2	12685716	12685717	2	AT	core_nonrep	4	1	1
Rue3-1-31	2	12686230	12686231	1	G	nonrep	3	1	1
Rue3-1-31	2	12687965	12687966	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	12693376	12693377	1	C	core_nonrep	4	1	1
Rue3-1-31	2	12693997	12693998	3	TAA	core_nonrep	6	0.833333	1
Rue3-1-31	2	12694433	12694434	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12694642	12694643	2	AG	core_nonrep	6	0.8	1
Rue3-1-31	2	12694833	12694834	2	AT	core_nonrep	3	1	1
Rue3-1-31	2	12707199	12707200	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	2	12708173	12708174	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	12716303	12716304	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	12716304	12716305	2	TA	core_nonrep	4	0.8	1
Rue3-1-31	2	12722525	12722526	1	T	core_nonrep	8	0.875	1
Rue3-1-31	2	12723366	12723367	2	TT	core_nonrep	23	0.869565	1
Rue3-1-31	2	12724448	12724449	2	TA	core_nonrep	4	1	1
Rue3-1-31	2	12729328	12729329	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	12732129	12732130	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12732839	12732840	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	12735356	12735357	1	C	core_nonrep	10	0.909091	1
Rue3-1-31	2	12745736	12745737	1	C	nonrep	3	1	1
Rue3-1-31	2	12747760	12747761	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12747767	12747768	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	12758818	12758819	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12763970	12763971	2	AA	core_nonrep	7	1	1
Rue3-1-31	2	12773530	12773531	1	A	core_nonrep	8	0.8	1
Rue3-1-31	2	12773895	12773896	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12775660	12775661	1	A	core_nonrep	13	1	1
Rue3-1-31	2	12780624	12780625	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12790327	12790328	3	AAT	core_nonrep	3	1	1
Rue3-1-31	2	12794711	12794712	1	C	core_nonrep	7	1	1
Rue3-1-31	2	12795512	12795513	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12806594	12806595	1	T	core_nonrep	8	0.75	1
Rue3-1-31	2	12811682	12811683	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	12811687	12811688	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12815437	12815438	2	TA	core_nonrep	6	1	1
Rue3-1-31	2	12831283	12831284	1	C	core_nonrep	6	1	1
Rue3-1-31	2	12849499	12849500	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12849968	12849969	1	T	core_nonrep	3	1	1
Rue3-1-31	2	12851896	12851897	1	C	nonrep	3	1	1
Rue3-1-31	2	12854485	12854486	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	2	12861148	12861149	1	A	core_nonrep	3	1	1
Rue3-1-31	2	12861149	12861150	1	G	core_nonrep	5	1	1
Rue3-1-31	2	12866198	12866199	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	12888827	12888828	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12890157	12890158	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12902320	12902321	2	CT	core_nonrep	10	1	1
Rue3-1-31	2	12903275	12903276	1	G	core_nonrep	4	1	1
Rue3-1-31	2	12903989	12903990	1	T	core_nonrep	3	1	1
Rue3-1-31	2	12905737	12905738	1	G	nonrep	3	1	1
Rue3-1-31	2	12905738	12905739	1	T	core_nonrep	3	1	1
Rue3-1-31	2	12906290	12906291	1	A	core_nonrep	7	1	1
Rue3-1-31	2	12907881	12907882	1	G	core_nonrep	3	1	1
Rue3-1-31	2	12912251	12912252	1	G	core_nonrep	5	1	1
Rue3-1-31	2	12914524	12914525	1	C	core_nonrep	5	1	1
Rue3-1-31	2	12914545	12914546	2	CA	core_nonrep	9	0.888889	1
Rue3-1-31	2	12914611	12914612	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12915840	12915841	1	A	core_nonrep	5	1	1
Rue3-1-31	2	12916720	12916721	1	A	nonrep	5	1	1
Rue3-1-31	2	12917454	12917455	3	GTC	core_nonrep	9	0.727273	1
Rue3-1-31	2	12918249	12918250	1	T	core_nonrep	12	1	1
Rue3-1-31	2	12919493	12919494	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12927606	12927607	1	A	core_nonrep	5	1	1
Rue3-1-31	2	12929418	12929419	1	T	core_nonrep	8	1	1
Rue3-1-31	2	12929501	12929502	2	GA	core_nonrep	7	0.857143	1
Rue3-1-31	2	12932764	12932765	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	12935747	12935748	2	TG	core_nonrep	12	0.916667	1
Rue3-1-31	2	12954307	12954308	1	A	core_nonrep	10	1	1
Rue3-1-31	2	12967697	12967698	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12968502	12968503	1	T	core_nonrep	4	1	1
Rue3-1-31	2	12970140	12970141	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	2	12972894	12972895	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	12972896	12972897	2	GA	core_nonrep	4	1	1
Rue3-1-31	2	12973730	12973731	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12973937	12973938	1	A	core_nonrep	6	1	1
Rue3-1-31	2	12974348	12974349	1	C	core_nonrep	5	1	1
Rue3-1-31	2	12975078	12975079	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	2	12981569	12981570	1	T	core_nonrep	7	1	1
Rue3-1-31	2	12985863	12985864	1	G	core_nonrep	7	0.875	1
Rue3-1-31	2	12986058	12986059	1	A	core_nonrep	4	1	1
Rue3-1-31	2	12992297	12992298	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	13003579	13003580	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	13007450	13007451	1	A	core_nonrep	7	1	1
Rue3-1-31	2	13011812	13011813	1	C	core_nonrep	9	0.777778	1
Rue3-1-31	2	13015249	13015250	1	A	core_nonrep	9	1	1
Rue3-1-31	2	13016012	13016013	1	C	core_nonrep	7	1	1
Rue3-1-31	2	13016021	13016022	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	2	13018066	13018067	1	G	core_nonrep	7	1	1
Rue3-1-31	2	13018771	13018772	1	G	core_nonrep	5	1	1
Rue3-1-31	2	13019959	13019960	1	C	core_nonrep	6	1	1
Rue3-1-31	2	13024708	13024709	1	T	core_nonrep	4	1	1
Rue3-1-31	2	13024865	13024866	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	2	13031018	13031019	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	2	13031265	13031266	1	A	core_nonrep	5	1	1
Rue3-1-31	2	13038786	13038787	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	13039816	13039817	1	T	core_nonrep	9	1	1
Rue3-1-31	2	13040109	13040110	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	13040760	13040761	1	T	core_nonrep	6	1	1
Rue3-1-31	2	13043092	13043093	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13043339	13043340	1	G	core_nonrep	5	1	1
Rue3-1-31	2	13043762	13043763	1	A	core_nonrep	3	1	1
Rue3-1-31	2	13047591	13047592	1	T	core_nonrep	13	0.928571	1
Rue3-1-31	2	13048720	13048721	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	13050112	13050113	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13050114	13050115	1	T	core_nonrep	7	1	1
Rue3-1-31	2	13061043	13061044	1	A	core_nonrep	5	1	1
Rue3-1-31	2	13073430	13073431	1	C	core_nonrep	5	1	1.25
Rue3-1-31	2	13078611	13078612	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	13087233	13087234	1	C	core_nonrep	9	1	1
Rue3-1-31	2	13091174	13091175	1	A	core_nonrep	9	1	1
Rue3-1-31	2	13091912	13091913	1	A	core_nonrep	7	1	1
Rue3-1-31	2	13096532	13096533	1	G	core_nonrep	5	1	1
Rue3-1-31	2	13125306	13125307	1	T	core_nonrep	19	1	1
Rue3-1-31	2	13125769	13125770	1	A	core_nonrep	10	1	1
Rue3-1-31	2	13132268	13132269	1	A	core_nonrep	8	1	1
Rue3-1-31	2	13136230	13136231	1	C	core_nonrep	5	1	1
Rue3-1-31	2	13136317	13136318	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	13140678	13140679	2	CA	core_nonrep	6	0.833333	1
Rue3-1-31	2	13140744	13140745	1	C	nonrep	4	0.8	1
Rue3-1-31	2	13152893	13152894	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	2	13165996	13165997	1	C	core_nonrep	6	1	1
Rue3-1-31	2	13170742	13170743	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	2	13174372	13174373	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	13178548	13178549	1	G	nonrep	6	0.75	1
Rue3-1-31	2	13181109	13181110	1	A	core_nonrep	4	1	1.28571
Rue3-1-31	2	13185886	13185887	1	T	core_nonrep	6	1	1
Rue3-1-31	2	13186030	13186031	2	TT	core_nonrep	9	0.75	1
Rue3-1-31	2	13192402	13192403	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13210278	13210279	3	ACG	core_nonrep	7	0.857143	1
Rue3-1-31	2	13242045	13242046	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	13258915	13258916	2	TA	core_nonrep	6	1	1
Rue3-1-31	2	13262649	13262650	1	A	core_nonrep	7	1	1
Rue3-1-31	2	13282617	13282618	1	T	nonrep	3	0.75	1
Rue3-1-31	2	13282774	13282775	1	A	core_nonrep	3	1	1
Rue3-1-31	2	13291552	13291553	1	C	nonrep	3	0.75	1
Rue3-1-31	2	13295568	13295569	1	A	nonrep	3	0.75	1
Rue3-1-31	2	13298512	13298513	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	2	13298514	13298515	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	2	13300731	13300732	1	A	core_nonrep	11	1	1
Rue3-1-31	2	13301361	13301362	1	T	core_nonrep	7	1	1
Rue3-1-31	2	13301840	13301841	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13302658	13302659	1	A	core_nonrep	10	1	1
Rue3-1-31	2	13306746	13306747	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	13308999	13309000	1	A	core_nonrep	7	1	1
Rue3-1-31	2	13326690	13326691	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	13329247	13329248	1	T	core_nonrep	3	1	1
Rue3-1-31	2	13334652	13334653	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	13335536	13335537	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	13357504	13357505	1	A	core_nonrep	3	1	1.2
Rue3-1-31	2	13358977	13358978	1	A	core_nonrep	18	1	1
Rue3-1-31	2	13363250	13363251	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	2	13365055	13365056	2	AC	core_nonrep	5	0.8	1
Rue3-1-31	2	13366007	13366008	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	2	13372570	13372571	1	C	core_nonrep	7	1	1
Rue3-1-31	2	13373846	13373847	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	13379408	13379409	2	AA	core_nonrep	6	0.75	1
Rue3-1-31	2	13385885	13385886	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	13390627	13390628	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	13399902	13399903	1	T	core_nonrep	9	1	1
Rue3-1-31	2	13405616	13405617	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	2	13405620	13405621	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	2	13418759	13418760	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	2	13418988	13418989	2	TA	nonrep	6	0.75	1
Rue3-1-31	2	13420510	13420511	2	CA	core_nonrep	5	1	1
Rue3-1-31	2	13420701	13420702	1	A	core_nonrep	8	1	1
Rue3-1-31	2	13433862	13433863	1	C	core_nonrep	3	1	1
Rue3-1-31	2	13435478	13435479	1	C	core_nonrep	8	1	1
Rue3-1-31	2	13438006	13438007	3	CAA	core	5	0.714286	1.44444
Rue3-1-31	2	13439467	13439468	1	T	core_nonrep	3	1	1
Rue3-1-31	2	13442763	13442764	1	A	core_nonrep	5	1	1
Rue3-1-31	2	13443251	13443252	1	T	core_nonrep	5	1	1
Rue3-1-31	2	13445895	13445896	1	T	core_nonrep	5	1	1
Rue3-1-31	2	13446473	13446474	1	T	core_nonrep	4	1	1
Rue3-1-31	2	13454292	13454293	1	G	core_nonrep	9	0.8	1
Rue3-1-31	2	13476659	13476660	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	2	13486121	13486122	1	T	core_nonrep	5	1	1
Rue3-1-31	2	13488006	13488007	1	T	core_nonrep	6	1	1.3
Rue3-1-31	2	13496267	13496268	1	A	core_nonrep	5	1	1
Rue3-1-31	2	13503488	13503489	2	AT	core_nonrep	3	1	1
Rue3-1-31	2	13507052	13507053	1	T	core_nonrep	6	1	1
Rue3-1-31	2	13507101	13507102	1	C	nonrep	3	0.75	1
Rue3-1-31	2	13521805	13521806	1	A	core_nonrep	3	1	1
Rue3-1-31	2	13523999	13524000	1	T	nonrep	7	0.7	1
Rue3-1-31	2	13534818	13534819	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	13534832	13534833	1	T	core_nonrep	7	1	1
Rue3-1-31	2	13535610	13535611	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	13535611	13535612	2	AC	core_nonrep	5	0.833333	1
Rue3-1-31	2	13536774	13536775	2	TG	core_nonrep	5	0.75	1
Rue3-1-31	2	13547910	13547911	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	13550837	13550838	1	C	core_nonrep	8	0.714286	1
Rue3-1-31	2	13554086	13554087	1	G	core_nonrep	8	1	1
Rue3-1-31	2	13555163	13555164	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	13559090	13559091	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13559592	13559593	1	C	core_nonrep	5	1	1
Rue3-1-31	2	13560169	13560170	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	13566807	13566808	1	A	core_nonrep	7	1	1
Rue3-1-31	2	13567364	13567365	1	T	core_nonrep	10	0.9	1
Rue3-1-31	2	13577513	13577514	1	T	core_nonrep	6	1	1
Rue3-1-31	2	13577569	13577570	1	A	core_nonrep	5	1	1
Rue3-1-31	2	13589863	13589864	1	C	core_nonrep	9	0.714286	1
Rue3-1-31	2	13591270	13591271	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13591975	13591976	1	A	core_nonrep	19	0.944444	1
Rue3-1-31	2	13597407	13597408	1	A	core_nonrep	8	1	1
Rue3-1-31	2	13597479	13597480	1	T	core_nonrep	5	1	1
Rue3-1-31	2	13599105	13599106	1	G	core_nonrep	10	1	1
Rue3-1-31	2	13599881	13599882	1	T	core_nonrep	7	1	1
Rue3-1-31	2	13602182	13602183	1	G	core_nonrep	9	0.8	1
Rue3-1-31	2	13607302	13607303	1	T	nonrep	4	0.8	1
Rue3-1-31	2	13607612	13607613	1	T	core_nonrep	13	0.818182	1
Rue3-1-31	2	13609639	13609640	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	2	13631707	13631708	1	T	core_nonrep	3	1	1
Rue3-1-31	2	13639360	13639361	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13640368	13640369	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	13645814	13645815	2	AG	core_nonrep	4	0.8	1
Rue3-1-31	2	13648938	13648939	2	AC	core_nonrep	3	1	1
Rue3-1-31	2	13652559	13652560	1	A	core_nonrep	9	1	1
Rue3-1-31	2	13663324	13663325	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13664320	13664321	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13664544	13664545	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	2	13667703	13667704	1	G	core_nonrep	7	1	1
Rue3-1-31	2	13670695	13670696	1	T	core_nonrep	10	1	1
Rue3-1-31	2	13676649	13676650	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	13677245	13677246	1	C	core_nonrep	9	1	1
Rue3-1-31	2	13680524	13680525	1	T	core_nonrep	4	1	1
Rue3-1-31	2	13681323	13681324	3	GTT	core_nonrep	4	1	1
Rue3-1-31	2	13698055	13698056	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	13698291	13698292	1	T	core_nonrep	7	1	1
Rue3-1-31	2	13701064	13701065	3	ACA	core_nonrep	11	0.833333	1
Rue3-1-31	2	13726083	13726084	1	A	core_nonrep	9	1	1
Rue3-1-31	2	13737061	13737062	1	T	core_nonrep	10	1	1
Rue3-1-31	2	13741498	13741499	1	T	core_nonrep	6	1	1
Rue3-1-31	2	13753045	13753046	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	2	13773227	13773228	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	13773971	13773972	1	T	core_nonrep	5	1	1
Rue3-1-31	2	13777516	13777517	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	13780942	13780943	1	C	core_nonrep	3	0.75	1
Rue3-1-31	2	13782710	13782711	1	T	core_nonrep	4	1	1
Rue3-1-31	2	13794471	13794472	1	C	core_nonrep	10	1	1
Rue3-1-31	2	13795477	13795478	1	G	core_nonrep	15	1	1
Rue3-1-31	2	13834752	13834753	1	T	core_nonrep	9	1	1
Rue3-1-31	2	13835579	13835580	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	2	13837153	13837154	1	A	core_nonrep	16	1	1
Rue3-1-31	2	13844096	13844097	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	13844427	13844428	1	T	nonrep	4	1	1
Rue3-1-31	2	13849436	13849437	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	13851547	13851548	1	G	core_nonrep	6	1	1
Rue3-1-31	2	13854190	13854191	2	TA	core_nonrep	5	1	1
Rue3-1-31	2	13855232	13855233	1	A	core_nonrep	4	1	1
Rue3-1-31	2	13855653	13855654	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	2	13857058	13857059	1	G	nonrep	3	0.75	1
Rue3-1-31	2	13863791	13863792	1	G	nonrep	4	1	1
Rue3-1-31	2	13863855	13863856	2	AA	core_nonrep	4	1	1
Rue3-1-31	2	13907706	13907707	1	C	core_nonrep	17	1	1
Rue3-1-31	2	13919386	13919387	1	C	core_nonrep	5	1	1
Rue3-1-31	2	13923302	13923303	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	13923304	13923305	2	GC	core_nonrep	5	0.833333	1
Rue3-1-31	2	13923463	13923464	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	13923535	13923536	1	G	core_nonrep	9	1	1
Rue3-1-31	2	13926788	13926789	2	CA	core_nonrep	8	1	1
Rue3-1-31	2	13927758	13927759	1	A	core_nonrep	8	1	1
Rue3-1-31	2	13930866	13930867	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	13937136	13937137	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13941283	13941284	1	G	core_nonrep	10	0.9	1
Rue3-1-31	2	13954322	13954323	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	13956515	13956516	1	T	core_nonrep	10	1	1
Rue3-1-31	2	13969117	13969118	2	TA	core_nonrep	3	1	1
Rue3-1-31	2	13972672	13972673	1	A	core_nonrep	13	1	1
Rue3-1-31	2	13976800	13976801	2	TC	core_nonrep	7	0.75	1
Rue3-1-31	2	13978909	13978910	3	AAC	core_nonrep	11	1	1
Rue3-1-31	2	13984540	13984541	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13984576	13984577	1	A	core_nonrep	6	1	1
Rue3-1-31	2	13985432	13985433	1	G	core_nonrep	11	0.8	1
Rue3-1-31	2	14008814	14008815	1	G	nonrep	3	0.75	1
Rue3-1-31	2	14016728	14016729	1	G	core_nonrep	5	1	1
Rue3-1-31	2	14017689	14017690	1	G	core_nonrep	3	1	1
Rue3-1-31	2	14041159	14041160	1	T	core_nonrep	20	0.9375	1
Rue3-1-31	2	14043147	14043148	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	2	14043267	14043268	1	C	core_nonrep	12	0.846154	1
Rue3-1-31	2	14053580	14053581	1	A	core_nonrep	5	1	1
Rue3-1-31	2	14053590	14053591	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14062358	14062359	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	14066990	14066991	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14073043	14073044	2	TA	core_nonrep	5	0.8	1
Rue3-1-31	2	14081811	14081812	2	AG	nonrep	3	0.75	1
Rue3-1-31	2	14086783	14086784	1	T	core_nonrep	10	1	1
Rue3-1-31	2	14090135	14090136	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	2	14091632	14091633	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14116549	14116550	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	14133728	14133729	1	G	core_nonrep	12	0.909091	1
Rue3-1-31	2	14141542	14141543	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	14150056	14150057	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	14158095	14158096	1	A	core_nonrep	9	1	1
Rue3-1-31	2	14158252	14158253	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	14159417	14159418	2	TG	core_nonrep	8	1	1
Rue3-1-31	2	14161526	14161527	1	G	nonrep	4	0.8	1
Rue3-1-31	2	14165019	14165020	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	2	14204830	14204831	1	T	core_nonrep	7	1	1
Rue3-1-31	2	14210284	14210285	1	A	core_nonrep	6	1	1
Rue3-1-31	2	14210883	14210884	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	2	14218892	14218893	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	14218987	14218988	1	T	core_nonrep	6	1	1
Rue3-1-31	2	14223969	14223970	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14251014	14251015	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	14260372	14260373	1	G	core_nonrep	10	1	1
Rue3-1-31	2	14271397	14271398	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	2	14276059	14276060	1	A	nonrep	6	0.75	1
Rue3-1-31	2	14281333	14281334	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	14294016	14294017	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14295063	14295064	1	A	core_nonrep	5	1	1
Rue3-1-31	2	14295064	14295065	1	G	core_nonrep	6	1	1
Rue3-1-31	2	14295362	14295363	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	14296923	14296924	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14296925	14296926	1	A	core_nonrep	5	1	1
Rue3-1-31	2	14298882	14298883	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	14302424	14302425	1	T	core_nonrep	12	0.818182	1
Rue3-1-31	2	14302947	14302948	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	2	14304014	14304015	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	14309667	14309668	1	A	core_nonrep	12	1	1
Rue3-1-31	2	14309683	14309684	1	A	core_nonrep	10	1	1
Rue3-1-31	2	14310031	14310032	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	14311140	14311141	1	C	core_nonrep	7	0.875	1
Rue3-1-31	2	14316275	14316276	1	G	core_nonrep	3	1	1
Rue3-1-31	2	14316430	14316431	1	A	core_nonrep	8	1	1
Rue3-1-31	2	14323863	14323864	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	14331443	14331444	2	TT	core_nonrep	5	1	1
Rue3-1-31	2	14331747	14331748	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14332417	14332418	1	T	core_nonrep	10	1	1
Rue3-1-31	2	14337314	14337315	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14337625	14337626	1	T	nonrep	3	0.75	1
Rue3-1-31	2	14343942	14343943	1	A	nonrep	9	0.818182	1
Rue3-1-31	2	14343943	14343944	1	T	core_nonrep	9	1	1
Rue3-1-31	2	14356049	14356050	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	14357587	14357588	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	2	14359949	14359950	1	A	core_nonrep	8	1	1
Rue3-1-31	2	14367350	14367351	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14376652	14376653	3	AAG	core_nonrep	6	0.857143	1
Rue3-1-31	2	14389220	14389221	1	A	core_nonrep	7	1	1
Rue3-1-31	2	14395001	14395002	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	14395002	14395003	2	GA	core_nonrep	4	0.8	1
Rue3-1-31	2	14396447	14396448	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14398403	14398404	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	14401360	14401361	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	2	14408860	14408861	1	A	core_nonrep	10	0.9	1
Rue3-1-31	2	14408864	14408865	1	G	core_nonrep	10	1	1
Rue3-1-31	2	14408905	14408906	1	T	core_nonrep	3	1	1
Rue3-1-31	2	14408928	14408929	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14413791	14413792	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	2	14420039	14420040	1	T	nonrep	3	0.75	1
Rue3-1-31	2	14422288	14422289	2	TA	core_nonrep	3	1	1
Rue3-1-31	2	14423110	14423111	1	T	nonrep	3	0.75	1
Rue3-1-31	2	14429565	14429566	1	T	core_nonrep	3	1	1
Rue3-1-31	2	14430409	14430410	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	14432043	14432044	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	14434015	14434016	1	T	core_nonrep	9	0.8	1
Rue3-1-31	2	14437749	14437750	2	TG	core_nonrep	7	1	1
Rue3-1-31	2	14441849	14441850	1	T	core_nonrep	6	1	1
Rue3-1-31	2	14558497	14558498	1	A	nonrep	4	0.8	1
Rue3-1-31	2	14565813	14565814	2	GG	core_nonrep	5	0.8	1
Rue3-1-31	2	14581276	14581277	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	14589075	14589076	1	C	core_nonrep	8	1	1
Rue3-1-31	2	14589088	14589089	1	G	core_nonrep	7	1	1
Rue3-1-31	2	14591810	14591811	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	14596940	14596941	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	2	14607644	14607645	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14608947	14608948	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14623760	14623761	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14627456	14627457	1	A	core_nonrep	6	1	1
Rue3-1-31	2	14639842	14639843	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	2	14643346	14643347	1	C	core_nonrep	5	0.75	1
Rue3-1-31	2	14653765	14653766	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	14685645	14685646	1	T	nonrep	3	1	1
Rue3-1-31	2	14686495	14686496	1	G	core_nonrep	9	1	1
Rue3-1-31	2	14687880	14687881	1	A	nonrep	3	0.75	1
Rue3-1-31	2	14688152	14688153	1	T	nonrep	4	0.8	1
Rue3-1-31	2	14689478	14689479	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14694259	14694260	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14694260	14694261	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14695493	14695494	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14711394	14711395	1	C	core_nonrep	12	1	1
Rue3-1-31	2	14714520	14714521	1	G	core_nonrep	11	1	1
Rue3-1-31	2	14721711	14721712	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14757115	14757116	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14786771	14786772	1	A	core_nonrep	3	1	1
Rue3-1-31	2	14790289	14790290	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14796284	14796285	1	A	core_nonrep	14	1	1
Rue3-1-31	2	14807810	14807811	1	A	core_nonrep	8	1	1
Rue3-1-31	2	14819748	14819749	2	AA	core_nonrep	8	1	1
Rue3-1-31	2	14820666	14820667	1	T	core_nonrep	3	1	1
Rue3-1-31	2	14820683	14820684	1	T	nonrep	3	0.75	1
Rue3-1-31	2	14833277	14833278	1	G	core_nonrep	4	1	1
Rue3-1-31	2	14851771	14851772	1	A	core_nonrep	5	1	1
Rue3-1-31	2	14854609	14854610	1	A	core_nonrep	6	1	1
Rue3-1-31	2	14857730	14857731	1	A	core_nonrep	6	1	1
Rue3-1-31	2	14864069	14864070	1	A	core_nonrep	10	0.9	1
Rue3-1-31	2	14869498	14869499	1	T	core_nonrep	5	1	1
Rue3-1-31	2	14878160	14878161	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	2	14886630	14886631	1	T	core_nonrep	15	1	1
Rue3-1-31	2	14886719	14886720	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14888223	14888224	1	G	core_nonrep	5	1	1
Rue3-1-31	2	14888280	14888281	1	A	core_nonrep	7	1	1
Rue3-1-31	2	14893386	14893387	1	T	core_nonrep	4	1	1
Rue3-1-31	2	14901310	14901311	1	T	core_nonrep	8	1	1
Rue3-1-31	2	14913663	14913664	2	TT	core_nonrep	7	1	1
Rue3-1-31	2	14915748	14915749	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	14938947	14938948	1	A	core_nonrep	12	1	1
Rue3-1-31	2	14944651	14944652	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	14951501	14951502	1	G	core_nonrep	5	1	1
Rue3-1-31	2	14964457	14964458	1	A	core_nonrep	4	1	1
Rue3-1-31	2	14993022	14993023	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	2	15010213	15010214	2	TG	core_nonrep	4	0.8	1
Rue3-1-31	2	15010215	15010216	1	T	core_nonrep	6	1	1
Rue3-1-31	2	15013461	15013462	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	15014192	15014193	1	T	core_nonrep	11	1	1
Rue3-1-31	2	15016023	15016024	1	T	core_nonrep	7	1	1
Rue3-1-31	2	15019600	15019601	1	A	core_nonrep	12	1	1
Rue3-1-31	2	15026702	15026703	3	GAA	core_nonrep	16	0.888889	1
Rue3-1-31	2	15031539	15031540	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	15036765	15036766	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	15044475	15044476	1	T	core_nonrep	6	1	1
Rue3-1-31	2	15047654	15047655	1	A	nonrep	3	1	1
Rue3-1-31	2	15082188	15082189	1	C	core_nonrep	6	1	1
Rue3-1-31	2	15089879	15089880	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15100694	15100695	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	15101965	15101966	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15102748	15102749	1	T	core_nonrep	3	1	1
Rue3-1-31	2	15105358	15105359	1	G	core_nonrep	6	1	1
Rue3-1-31	2	15137583	15137584	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	15138731	15138732	1	C	nonrep	7	0.875	1
Rue3-1-31	2	15142613	15142614	1	A	core_nonrep	6	1	1
Rue3-1-31	2	15142635	15142636	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	15146890	15146891	1	T	core_nonrep	4	1	1
Rue3-1-31	2	15149376	15149377	2	AC	core_nonrep	6	1	1
Rue3-1-31	2	15150766	15150767	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15163959	15163960	1	C	core_nonrep	13	1	1
Rue3-1-31	2	15163960	15163961	1	A	core_nonrep	14	1	1
Rue3-1-31	2	15164565	15164566	1	T	core_nonrep	16	1	1
Rue3-1-31	2	15170212	15170213	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	2	15181696	15181697	1	A	core_nonrep	6	1	1
Rue3-1-31	2	15210016	15210017	1	T	core_nonrep	7	1	1
Rue3-1-31	2	15210072	15210073	2	AT	nonrep	3	0.75	1
Rue3-1-31	2	15211022	15211023	1	A	core_nonrep	8	0.75	1
Rue3-1-31	2	15214078	15214079	1	A	core_nonrep	5	1	1
Rue3-1-31	2	15225297	15225298	1	T	core_nonrep	4	1	1
Rue3-1-31	2	15226443	15226444	1	G	core_nonrep	8	1	1
Rue3-1-31	2	15233817	15233818	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	2	15242733	15242734	1	T	core_nonrep	9	1	1
Rue3-1-31	2	15245312	15245313	2	CT	core_nonrep	10	1	1
Rue3-1-31	2	15245707	15245708	1	T	core_nonrep	7	1	1
Rue3-1-31	2	15260355	15260356	1	C	core_nonrep	9	1	1
Rue3-1-31	2	15264133	15264134	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15291162	15291163	1	C	core_nonrep	4	0.8	1
Rue3-1-31	2	15291892	15291893	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	15291893	15291894	2	TT	core_nonrep	4	1	1
Rue3-1-31	2	15292047	15292048	1	A	core_nonrep	5	1	1
Rue3-1-31	2	15300339	15300340	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15300952	15300953	1	A	nonrep	3	0.75	1
Rue3-1-31	2	15301356	15301357	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	15301358	15301359	1	A	core_nonrep	4	1	1
Rue3-1-31	2	15302980	15302981	1	A	core_nonrep	10	1	1
Rue3-1-31	2	15305949	15305950	1	T	core_nonrep	3	1	1
Rue3-1-31	2	15307772	15307773	1	T	core_nonrep	5	1	1
Rue3-1-31	2	15315904	15315905	1	C	core_nonrep	5	1	1
Rue3-1-31	2	15324545	15324546	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	15324991	15324992	2	AA	core_nonrep	3	1	1
Rue3-1-31	2	15329208	15329209	1	A	core_nonrep	15	1	1
Rue3-1-31	2	15330281	15330282	2	AA	core_nonrep	7	0.7	1
Rue3-1-31	2	15332211	15332212	1	C	core_nonrep	6	1	1
Rue3-1-31	2	15403743	15403744	1	C	core_nonrep	9	1	1
Rue3-1-31	2	15409147	15409148	1	A	core_nonrep	3	1	1
Rue3-1-31	2	15488853	15488854	1	T	core_nonrep	3	1	1
Rue3-1-31	2	15508255	15508256	1	A	nonrep	3	1	1
Rue3-1-31	2	15509124	15509125	3	GAA	core_nonrep	7	0.777778	1
Rue3-1-31	2	15510565	15510566	2	CT	core_nonrep	12	0.909091	1
Rue3-1-31	2	15521362	15521363	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	15526721	15526722	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	15531075	15531076	1	C	core_nonrep	13	1	1
Rue3-1-31	2	15552171	15552172	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	15560326	15560327	1	A	core_nonrep	9	1	1
Rue3-1-31	2	15571401	15571402	1	A	core_nonrep	3	1	1
Rue3-1-31	2	15620485	15620486	1	G	core_nonrep	5	1	1
Rue3-1-31	2	15643608	15643609	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	15680612	15680613	1	G	core_nonrep	4	1	1
Rue3-1-31	2	15683428	15683429	1	A	core_nonrep	10	1	1
Rue3-1-31	2	15685893	15685894	1	T	core_nonrep	5	1	1
Rue3-1-31	2	15720693	15720694	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	15733659	15733660	1	T	core_nonrep	9	1	1
Rue3-1-31	2	15735526	15735527	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	15735574	15735575	1	C	core_nonrep	5	1	1
Rue3-1-31	2	15736438	15736439	2	GT	core_nonrep	6	1	1
Rue3-1-31	2	15737353	15737354	1	T	nonrep	5	0.714286	1
Rue3-1-31	2	15738114	15738115	1	A	nonrep	3	1	1
Rue3-1-31	2	15738456	15738457	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	2	15739305	15739306	2	AT	core_nonrep	6	0.714286	1
Rue3-1-31	2	15739313	15739314	1	G	core_nonrep	8	1	1
Rue3-1-31	2	15739621	15739622	1	A	core_nonrep	5	1	1
Rue3-1-31	2	15739715	15739716	1	T	core_nonrep	7	1	1
Rue3-1-31	2	15748015	15748016	1	T	core_nonrep	9	1	1
Rue3-1-31	2	15755084	15755085	1	C	core_nonrep	5	1	1
Rue3-1-31	2	15757327	15757328	1	A	core_nonrep	3	1	1
Rue3-1-31	2	15757764	15757765	1	A	core_nonrep	6	1	1
Rue3-1-31	2	15757854	15757855	1	T	core_nonrep	6	1	1
Rue3-1-31	2	15887658	15887659	1	T	core_nonrep	13	1	1
Rue3-1-31	2	15899325	15899326	2	GG	core_nonrep	9	0.818182	1
Rue3-1-31	2	15899858	15899859	2	CA	core_nonrep	14	1	1
Rue3-1-31	2	15899972	15899973	1	A	core_nonrep	7	1	1
Rue3-1-31	2	15913309	15913310	1	A	core_nonrep	3	1	1
Rue3-1-31	2	15919851	15919852	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	15925723	15925724	1	G	core_nonrep	9	1	1
Rue3-1-31	2	15930818	15930819	1	A	core_nonrep	12	0.857143	1
Rue3-1-31	2	15961020	15961021	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	15961216	15961217	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	15962705	15962706	1	A	core_nonrep	5	1	1
Rue3-1-31	2	15967791	15967792	1	C	core_nonrep	11	1	1
Rue3-1-31	2	15968041	15968042	1	T	core_nonrep	5	1	1
Rue3-1-31	2	15968593	15968594	1	T	core_nonrep	5	1	1
Rue3-1-31	2	15970520	15970521	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	15971534	15971535	1	A	core_nonrep	3	1	1
Rue3-1-31	2	15975294	15975295	1	T	core_nonrep	3	1	1
Rue3-1-31	2	15979129	15979130	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	2	15979366	15979367	1	A	core_nonrep	7	1	1
Rue3-1-31	2	15979717	15979718	1	T	core_nonrep	4	1	1
Rue3-1-31	2	16063251	16063252	1	G	core_nonrep	3	1	1
Rue3-1-31	2	16064162	16064163	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	16065528	16065529	1	T	core_nonrep	4	1	1
Rue3-1-31	2	16076675	16076676	1	T	nonrep	9	0.692308	1
Rue3-1-31	2	16081581	16081582	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16083864	16083865	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	2	16085507	16085508	1	T	core_nonrep	8	1	1
Rue3-1-31	2	16102550	16102551	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	2	16122590	16122591	1	G	core_nonrep	5	1	1
Rue3-1-31	2	16156320	16156321	1	T	core_nonrep	5	1	1
Rue3-1-31	2	16173004	16173005	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	2	16173276	16173277	1	T	nonrep	8	0.8	1
Rue3-1-31	2	16174269	16174270	2	TT	core_nonrep	7	0.833333	1
Rue3-1-31	2	16186907	16186908	1	T	core_nonrep	14	1	1
Rue3-1-31	2	16190205	16190206	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	2	16191853	16191854	1	A	core_nonrep	16	1	1
Rue3-1-31	2	16199953	16199954	1	A	core_nonrep	10	1	1
Rue3-1-31	2	16217368	16217369	1	G	core_nonrep	9	0.857143	1
Rue3-1-31	2	16245760	16245761	1	A	core_nonrep	9	1	1
Rue3-1-31	2	16249964	16249965	1	A	core_nonrep	9	0.9	1
Rue3-1-31	2	16252146	16252147	2	AT	core_nonrep	4	1	1
Rue3-1-31	2	16252439	16252440	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	16258181	16258182	1	C	core_nonrep	6	0.8	1
Rue3-1-31	2	16261538	16261539	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16264865	16264866	2	CT	core_nonrep	9	1	1
Rue3-1-31	2	16268097	16268098	1	T	core_nonrep	14	0.857143	1
Rue3-1-31	2	16279887	16279888	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16281458	16281459	1	T	core_nonrep	16	1	1
Rue3-1-31	2	16285498	16285499	1	G	core_nonrep	3	1	1
Rue3-1-31	2	16288163	16288164	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16293224	16293225	1	T	core_nonrep	8	1	1
Rue3-1-31	2	16300324	16300325	1	C	core_nonrep	10	0.75	1
Rue3-1-31	2	16302253	16302254	1	G	core_nonrep	5	1	1
Rue3-1-31	2	16303345	16303346	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	16318180	16318181	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	2	16319159	16319160	1	A	core_nonrep	13	1	1
Rue3-1-31	2	16320639	16320640	1	G	core_nonrep	6	1	1
Rue3-1-31	2	16325954	16325955	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	16326396	16326397	3	ACC	core_nonrep	4	1	1
Rue3-1-31	2	16327854	16327855	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	16334267	16334268	1	A	core_nonrep	6	1	1
Rue3-1-31	2	16334268	16334269	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	2	16335532	16335533	1	T	core_nonrep	8	1	1
Rue3-1-31	2	16335634	16335635	1	G	core_nonrep	12	1	1
Rue3-1-31	2	16336479	16336480	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	2	16344523	16344524	1	T	core_nonrep	3	1	1
Rue3-1-31	2	16347571	16347572	2	TT	core_nonrep	7	0.714286	1
Rue3-1-31	2	16374667	16374668	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	16394909	16394910	2	TT	core_nonrep	7	1	1
Rue3-1-31	2	16397109	16397110	1	T	core_nonrep	5	1	1
Rue3-1-31	2	16398207	16398208	1	T	core_nonrep	4	0.75	1
Rue3-1-31	2	16398413	16398414	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	16399115	16399116	1	C	core_nonrep	4	0.8	1.42857
Rue3-1-31	2	16408684	16408685	3	ACA	core_nonrep	5	1	1
Rue3-1-31	2	16415281	16415282	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	2	16420731	16420732	1	A	core_nonrep	10	1	1
Rue3-1-31	2	16423493	16423494	1	G	nonrep	4	0.8	1
Rue3-1-31	2	16426233	16426234	1	A	core_nonrep	4	1	1
Rue3-1-31	2	16440754	16440755	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	2	16442838	16442839	1	T	core_nonrep	5	1	1
Rue3-1-31	2	16444346	16444347	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	2	16451268	16451269	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	16493591	16493592	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	16511424	16511425	1	A	core_nonrep	9	1	1
Rue3-1-31	2	16513282	16513283	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	16524790	16524791	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	16524791	16524792	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	16539525	16539526	1	A	core_nonrep	15	1	1
Rue3-1-31	2	16546040	16546041	1	A	core_nonrep	11	0.857143	1
Rue3-1-31	2	16556035	16556036	1	T	core_nonrep	7	1	1
Rue3-1-31	2	16561059	16561060	1	T	core_nonrep	4	1	1
Rue3-1-31	2	16562907	16562908	1	G	core_nonrep	8	1	1
Rue3-1-31	2	16563127	16563128	1	T	core_nonrep	4	1	1
Rue3-1-31	2	16566476	16566477	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16572264	16572265	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	16572785	16572786	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	16573014	16573015	1	T	core_nonrep	9	1	1
Rue3-1-31	2	16582082	16582083	1	A	nonrep	3	0.75	1.33333
Rue3-1-31	2	16582749	16582750	1	G	core_nonrep	3	1	1
Rue3-1-31	2	16591158	16591159	1	T	core_nonrep	15	1	1
Rue3-1-31	2	16594055	16594056	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	16595305	16595306	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	16596050	16596051	1	G	core_nonrep	7	1	1
Rue3-1-31	2	16600704	16600705	2	AT	core_nonrep	9	0.818182	1
Rue3-1-31	2	16609670	16609671	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	16611239	16611240	1	A	nonrep	4	0.8	1
Rue3-1-31	2	16615494	16615495	1	A	nonrep	3	0.75	1
Rue3-1-31	2	16615496	16615497	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	16616543	16616544	1	A	nonrep	3	0.75	1
Rue3-1-31	2	16632869	16632870	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	16636921	16636922	1	T	nonrep	7	0.875	1
Rue3-1-31	2	16639367	16639368	1	T	core_nonrep	9	1	1
Rue3-1-31	2	16647462	16647463	1	A	core_nonrep	6	1	1
Rue3-1-31	2	16648232	16648233	3	TAG	core_nonrep	4	0.75	1
Rue3-1-31	2	16648543	16648544	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16654285	16654286	1	T	core_nonrep	4	1	1
Rue3-1-31	2	16683701	16683702	1	A	core_nonrep	8	1	1
Rue3-1-31	2	16683714	16683715	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	16685533	16685534	1	C	core_nonrep	8	1	1
Rue3-1-31	2	16688487	16688488	1	T	core_nonrep	7	1	1
Rue3-1-31	2	16702058	16702059	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	2	16702642	16702643	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16704574	16704575	1	A	core_nonrep	6	1	1
Rue3-1-31	2	16705760	16705761	1	A	core_nonrep	17	0.933333	1
Rue3-1-31	2	16706480	16706481	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	2	16707200	16707201	1	T	core_nonrep	7	1	1
Rue3-1-31	2	16709041	16709042	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16709046	16709047	1	G	core_nonrep	5	1	1
Rue3-1-31	2	16709632	16709633	1	T	core_nonrep	7	1	1
Rue3-1-31	2	16710401	16710402	1	T	core_nonrep	7	1	1
Rue3-1-31	2	16748568	16748569	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	2	16756983	16756984	1	G	core_nonrep	25	0.956522	1
Rue3-1-31	2	16769182	16769183	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	16787781	16787782	1	C	core_nonrep	9	0.75	1
Rue3-1-31	2	16795153	16795154	1	C	core_nonrep	4	1	1
Rue3-1-31	2	16802292	16802293	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16802506	16802507	1	G	core_nonrep	5	0.8	1
Rue3-1-31	2	16811892	16811893	1	T	core_nonrep	3	1	1
Rue3-1-31	2	16821148	16821149	1	G	core_nonrep	5	1	1
Rue3-1-31	2	16822992	16822993	1	A	core_nonrep	6	1	1
Rue3-1-31	2	16827843	16827844	1	A	core_nonrep	4	1	1
Rue3-1-31	2	16840901	16840902	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16843182	16843183	1	A	core_nonrep	9	1	1
Rue3-1-31	2	16844165	16844166	1	A	core_nonrep	7	1	1
Rue3-1-31	2	16844295	16844296	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	16847686	16847687	1	A	core_nonrep	6	0.8	1
Rue3-1-31	2	16848483	16848484	1	A	core_nonrep	7	1	1
Rue3-1-31	2	16858634	16858635	1	G	core_nonrep	14	1	1
Rue3-1-31	2	16867535	16867536	1	A	core_nonrep	7	1	1
Rue3-1-31	2	16870851	16870852	1	T	core_nonrep	3	1	1
Rue3-1-31	2	16870852	16870853	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16873978	16873979	1	C	core_nonrep	7	1	1
Rue3-1-31	2	16896988	16896989	1	A	core_nonrep	7	1	1
Rue3-1-31	2	16902560	16902561	1	T	core_nonrep	3	1	1
Rue3-1-31	2	16902638	16902639	1	T	core_nonrep	5	0.75	1
Rue3-1-31	2	16903659	16903660	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16912892	16912893	1	T	core_nonrep	6	1	1
Rue3-1-31	2	16922323	16922324	1	A	core_nonrep	4	1	1
Rue3-1-31	2	16923145	16923146	1	T	core_nonrep	3	1	1
Rue3-1-31	2	16928341	16928342	1	G	core_nonrep	5	1	1.1
Rue3-1-31	2	16937713	16937714	1	A	core_nonrep	3	1	1
Rue3-1-31	2	16937716	16937717	1	G	core_nonrep	3	0.75	1
Rue3-1-31	2	16952141	16952142	1	A	nonrep	4	0.8	1
Rue3-1-31	2	16973375	16973376	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	2	16998478	16998479	1	A	core_nonrep	5	1	1
Rue3-1-31	2	16998488	16998489	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	17002781	17002782	1	A	core_nonrep	10	0.9	1
Rue3-1-31	2	17003738	17003739	1	A	nonrep	5	0.714286	1
Rue3-1-31	2	17009800	17009801	1	T	core_nonrep	8	1	1
Rue3-1-31	2	17034222	17034223	1	A	core_nonrep	11	0.9	1
Rue3-1-31	2	17039458	17039459	1	T	core_nonrep	7	0.75	1
Rue3-1-31	2	17046891	17046892	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17067876	17067877	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	17068901	17068902	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	17155517	17155518	2	GA	core_nonrep	14	1	1
Rue3-1-31	2	17166086	17166087	1	T	core_nonrep	6	1	1
Rue3-1-31	2	17166862	17166863	2	CC	core_nonrep	8	0.888889	1
Rue3-1-31	2	17171681	17171682	1	G	core_nonrep	5	0.8	1
Rue3-1-31	2	17171796	17171797	1	A	core_nonrep	5	1	1
Rue3-1-31	2	17174131	17174132	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	17197839	17197840	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17198588	17198589	2	TA	core_nonrep	7	0.777778	1
Rue3-1-31	2	17199407	17199408	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	17218202	17218203	1	T	core_nonrep	23	0.916667	1
Rue3-1-31	2	17218204	17218205	2	GG	core_nonrep	26	1	1
Rue3-1-31	2	17223016	17223017	1	C	core_nonrep	20	1	1
Rue3-1-31	2	17227320	17227321	1	C	core_nonrep	5	1	1.33333
Rue3-1-31	2	17243297	17243298	1	G	core_nonrep	15	1	1
Rue3-1-31	2	17248311	17248312	1	C	core_nonrep	5	1	1
Rue3-1-31	2	17255264	17255265	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17263742	17263743	1	A	core_nonrep	3	1	1.14286
Rue3-1-31	2	17264967	17264968	1	T	core_nonrep	15	0.846154	1
Rue3-1-31	2	17275225	17275226	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	17275833	17275834	1	A	core_nonrep	5	1	1
Rue3-1-31	2	17277920	17277921	1	T	core_nonrep	21	1	1
Rue3-1-31	2	17287357	17287358	1	A	core_nonrep	14	1	1
Rue3-1-31	2	17290879	17290880	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	17291315	17291316	3	TTT	core_nonrep	10	0.909091	1
Rue3-1-31	2	17292745	17292746	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	2	17294315	17294316	1	A	core_nonrep	7	1	1
Rue3-1-31	2	17297936	17297937	1	A	core_nonrep	9	1	1
Rue3-1-31	2	17301072	17301073	1	C	core_nonrep	3	1	1
Rue3-1-31	2	17301080	17301081	2	AG	core_nonrep	4	1	1
Rue3-1-31	2	17302655	17302656	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	17302662	17302663	1	G	core_nonrep	6	0.75	1
Rue3-1-31	2	17303058	17303059	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	2	17303674	17303675	1	A	nonrep	3	1	1
Rue3-1-31	2	17304560	17304561	1	C	core_nonrep	3	1	1
Rue3-1-31	2	17304811	17304812	1	T	core_nonrep	8	1	1
Rue3-1-31	2	17304904	17304905	1	A	core_nonrep	3	1	1
Rue3-1-31	2	17306097	17306098	1	G	core_nonrep	4	1	1
Rue3-1-31	2	17366503	17366504	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17380875	17380876	1	A	core_nonrep	9	1	1
Rue3-1-31	2	17381450	17381451	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	2	17385961	17385962	1	T	core_nonrep	13	0.833333	1
Rue3-1-31	2	17386159	17386160	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	17386168	17386169	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	2	17386947	17386948	1	T	core_nonrep	5	0.8	1
Rue3-1-31	2	17386950	17386951	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	17386951	17386952	1	G	core_nonrep	6	1	1
Rue3-1-31	2	17403743	17403744	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	2	17404014	17404015	2	AA	core_nonrep	8	1	1
Rue3-1-31	2	17404242	17404243	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	17404360	17404361	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17427775	17427776	1	A	core_nonrep	5	1	1
Rue3-1-31	2	17449243	17449244	1	A	core_nonrep	10	0.9	1
Rue3-1-31	2	17449328	17449329	1	T	nonrep	3	1	1
Rue3-1-31	2	17450671	17450672	1	A	nonrep	3	1	1
Rue3-1-31	2	17466906	17466907	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	17477669	17477670	1	G	core_nonrep	4	0.75	1
Rue3-1-31	2	17481454	17481455	1	T	nonrep	4	0.8	1
Rue3-1-31	2	17505314	17505315	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	17506300	17506301	1	G	core_nonrep	5	1	1
Rue3-1-31	2	17526373	17526374	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17550117	17550118	1	A	core_nonrep	3	1	1
Rue3-1-31	2	17551276	17551277	1	A	core_nonrep	9	1	1
Rue3-1-31	2	17553955	17553956	1	T	core_nonrep	8	1	1
Rue3-1-31	2	17554065	17554066	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	17554069	17554070	1	C	core_nonrep	3	1	1
Rue3-1-31	2	17554893	17554894	2	AA	nonrep	5	0.833333	1
Rue3-1-31	2	17559332	17559333	1	G	core_nonrep	9	1	1
Rue3-1-31	2	17559334	17559335	1	C	core_nonrep	9	1	1
Rue3-1-31	2	17560065	17560066	1	A	core_nonrep	5	1	1
Rue3-1-31	2	17562254	17562255	1	C	core_nonrep	12	1	1
Rue3-1-31	2	17585722	17585723	1	T	core_nonrep	16	0.941176	1
Rue3-1-31	2	17589091	17589092	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	17589093	17589094	1	G	core_nonrep	5	1	1
Rue3-1-31	2	17589211	17589212	2	TA	core_nonrep	8	1	1
Rue3-1-31	2	17589666	17589667	1	G	core_nonrep	8	0.777778	1
Rue3-1-31	2	17590226	17590227	1	T	core_nonrep	4	1	1
Rue3-1-31	2	17620754	17620755	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17629639	17629640	1	G	core_nonrep	10	1	1
Rue3-1-31	2	17637913	17637914	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	2	17642287	17642288	3	GGA	core_nonrep	7	0.75	1
Rue3-1-31	2	17652009	17652010	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	2	17655026	17655027	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	17659705	17659706	1	A	core_nonrep	3	1	1
Rue3-1-31	2	17661467	17661468	1	G	core_nonrep	7	0.875	1
Rue3-1-31	2	17663114	17663115	1	C	core_nonrep	12	1	1
Rue3-1-31	2	17664539	17664540	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	17664541	17664542	1	T	nonrep	4	0.8	1
Rue3-1-31	2	17668802	17668803	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17668936	17668937	1	T	core_nonrep	4	1	1
Rue3-1-31	2	17674307	17674308	1	A	core_nonrep	13	1	1
Rue3-1-31	2	17675165	17675166	1	T	core_nonrep	11	1	1
Rue3-1-31	2	17678918	17678919	1	T	core_nonrep	3	1	1
Rue3-1-31	2	17682571	17682572	1	A	core_nonrep	6	1	1
Rue3-1-31	2	17691741	17691742	1	T	core_nonrep	3	1	1
Rue3-1-31	2	17691742	17691743	1	C	core_nonrep	3	1	1
Rue3-1-31	2	17695268	17695269	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	2	17695269	17695270	1	A	core_nonrep	8	0.875	1
Rue3-1-31	2	17696484	17696485	1	T	core_nonrep	7	1	1
Rue3-1-31	2	17702346	17702347	1	T	core_nonrep	13	1	1
Rue3-1-31	2	17703156	17703157	1	T	nonrep	3	1	1
Rue3-1-31	2	17718051	17718052	2	GA	core_nonrep	13	1	1
Rue3-1-31	2	17742279	17742280	1	A	core_nonrep	18	0.823529	1
Rue3-1-31	2	17758310	17758311	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	17809299	17809300	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	2	17813067	17813068	2	TT	core_nonrep	7	1	1
Rue3-1-31	2	17824640	17824641	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17831752	17831753	2	GC	core_nonrep	6	0.833333	1
Rue3-1-31	2	17835711	17835712	1	G	core_nonrep	6	0.8	1
Rue3-1-31	2	17835820	17835821	1	T	core_nonrep	5	1	1
Rue3-1-31	2	17835954	17835955	2	AC	core_nonrep	5	0.75	1
Rue3-1-31	2	17836728	17836729	1	T	core_nonrep	7	0.875	1
Rue3-1-31	2	17838281	17838282	1	A	core_nonrep	5	1	1
Rue3-1-31	2	17838346	17838347	1	T	core_nonrep	3	1	1
Rue3-1-31	2	17844345	17844346	1	G	core_nonrep	10	0.875	1
Rue3-1-31	2	17855940	17855941	1	T	core_nonrep	7	1	1
Rue3-1-31	2	17855994	17855995	1	A	nonrep	3	0.75	1
Rue3-1-31	2	17856768	17856769	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17859433	17859434	1	T	core_nonrep	5	1	1
Rue3-1-31	2	17862799	17862800	1	A	core_nonrep	9	1	1
Rue3-1-31	2	17862809	17862810	1	T	core_nonrep	9	1	1
Rue3-1-31	2	17862964	17862965	1	T	core_nonrep	8	1	1
Rue3-1-31	2	17863337	17863338	1	A	core_nonrep	9	1	1
Rue3-1-31	2	17864576	17864577	1	T	core_nonrep	7	1	1
Rue3-1-31	2	17871753	17871754	1	G	core_nonrep	14	0.875	1
Rue3-1-31	2	17874500	17874501	1	T	core_nonrep	12	0.818182	1
Rue3-1-31	2	17876321	17876322	1	A	core_nonrep	11	1	1
Rue3-1-31	2	17879659	17879660	1	T	core_nonrep	4	1	1
Rue3-1-31	2	17890195	17890196	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	17898246	17898247	1	A	core_nonrep	4	0.75	1
Rue3-1-31	2	17898530	17898531	1	A	core_nonrep	3	1	1
Rue3-1-31	2	17898588	17898589	1	A	core_nonrep	6	0.8	1.3
Rue3-1-31	2	17899015	17899016	1	C	core_nonrep	3	1	1
Rue3-1-31	2	17900711	17900712	1	T	core_nonrep	19	1	1
Rue3-1-31	2	17900759	17900760	1	G	core_nonrep	21	1	1
Rue3-1-31	2	17901849	17901850	1	T	core_nonrep	10	1	1
Rue3-1-31	2	17909220	17909221	1	T	nonrep	3	1	1
Rue3-1-31	2	17915429	17915430	1	T	nonrep	3	0.75	1
Rue3-1-31	2	17933522	17933523	1	G	core_nonrep	11	1	1
Rue3-1-31	2	17939250	17939251	1	A	nonrep	3	0.75	1
Rue3-1-31	2	17942011	17942012	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17946019	17946020	1	T	core_nonrep	3	1	1
Rue3-1-31	2	17951571	17951572	1	G	core_nonrep	5	1	1
Rue3-1-31	2	17981521	17981522	1	G	core_nonrep	4	1	1
Rue3-1-31	2	17982028	17982029	1	A	core_nonrep	8	1	1
Rue3-1-31	2	17983983	17983984	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17984050	17984051	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17988959	17988960	1	A	core_nonrep	7	1	1
Rue3-1-31	2	17992569	17992570	1	A	core_nonrep	4	1	1
Rue3-1-31	2	17993296	17993297	1	A	core_nonrep	3	1	1
Rue3-1-31	2	17996507	17996508	1	T	core_nonrep	14	1	1.0625
Rue3-1-31	2	17996646	17996647	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	18003769	18003770	1	A	core_nonrep	4	1	1
Rue3-1-31	2	18025050	18025051	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	18026563	18026564	1	G	core_nonrep	5	1	1
Rue3-1-31	2	18063853	18063854	1	C	core_nonrep	14	1	1
Rue3-1-31	2	18065613	18065614	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	2	18076955	18076956	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	2	18079971	18079972	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18079972	18079973	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	18080269	18080270	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18080285	18080286	1	A	core_nonrep	7	1	1
Rue3-1-31	2	18080378	18080379	1	A	core_nonrep	4	1	1
Rue3-1-31	2	18080924	18080925	1	G	core_nonrep	12	0.818182	1
Rue3-1-31	2	18092129	18092130	2	AG	core_nonrep	6	1	1
Rue3-1-31	2	18092130	18092131	1	G	core_nonrep	8	1	1
Rue3-1-31	2	18093384	18093385	1	C	core_nonrep	10	0.833333	1
Rue3-1-31	2	18093385	18093386	2	GG	core_nonrep	11	0.916667	1
Rue3-1-31	2	18094706	18094707	1	C	core_nonrep	5	0.8	1
Rue3-1-31	2	18096501	18096502	1	T	core_nonrep	6	0.8	1
Rue3-1-31	2	18097309	18097310	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18104457	18104458	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	18106211	18106212	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18109176	18109177	1	C	core_nonrep	7	1	1
Rue3-1-31	2	18169076	18169077	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	2	18172303	18172304	1	A	core_nonrep	3	1	1
Rue3-1-31	2	18175466	18175467	3	GAA	core_nonrep	3	1	1
Rue3-1-31	2	18182172	18182173	1	A	core_nonrep	8	1	1
Rue3-1-31	2	18185996	18185997	1	A	core_nonrep	17	1	1
Rue3-1-31	2	18200270	18200271	1	G	nonrep	6	0.857143	1.125
Rue3-1-31	2	18212565	18212566	1	A	core_nonrep	8	1	1
Rue3-1-31	2	18221244	18221245	1	G	core_nonrep	5	1	1
Rue3-1-31	2	18223211	18223212	1	T	core_nonrep	3	1	1
Rue3-1-31	2	18223667	18223668	1	A	core_nonrep	9	1	1
Rue3-1-31	2	18226560	18226561	1	A	core_nonrep	11	1	1
Rue3-1-31	2	18231804	18231805	1	A	core_nonrep	14	0.866667	1
Rue3-1-31	2	18235697	18235698	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	2	18235745	18235746	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	18243016	18243017	1	A	core_nonrep	5	1	1
Rue3-1-31	2	18243257	18243258	1	G	nonrep	3	1	1
Rue3-1-31	2	18260340	18260341	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18270280	18270281	1	A	core_nonrep	8	1	1
Rue3-1-31	2	18273578	18273579	1	G	core_nonrep	25	0.913043	1
Rue3-1-31	2	18274792	18274793	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18275009	18275010	1	C	core_nonrep	7	1	1
Rue3-1-31	2	18276258	18276259	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18278396	18278397	1	A	core_nonrep	8	1	1
Rue3-1-31	2	18279221	18279222	1	A	core_nonrep	7	1	1
Rue3-1-31	2	18284216	18284217	1	T	core_nonrep	13	1	1
Rue3-1-31	2	18316022	18316023	1	T	core_nonrep	13	0.833333	1
Rue3-1-31	2	18317253	18317254	1	A	core_nonrep	10	1	1
Rue3-1-31	2	18317259	18317260	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18324248	18324249	2	TT	core_nonrep	6	0.833333	1
Rue3-1-31	2	18324249	18324250	1	C	core_nonrep	8	0.75	1
Rue3-1-31	2	18328926	18328927	1	A	core_nonrep	5	1	1
Rue3-1-31	2	18328927	18328928	2	GG	core_nonrep	5	1	1
Rue3-1-31	2	18329136	18329137	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	2	18329137	18329138	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	2	18332832	18332833	1	G	core_nonrep	5	1	1
Rue3-1-31	2	18348254	18348255	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	2	18351031	18351032	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18351610	18351611	1	G	core_nonrep	3	1	1
Rue3-1-31	2	18351614	18351615	1	G	core_nonrep	3	1	1
Rue3-1-31	2	18351789	18351790	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	18352034	18352035	1	T	core_nonrep	9	1	1
Rue3-1-31	2	18355327	18355328	1	A	core_nonrep	5	1	1
Rue3-1-31	2	18356213	18356214	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	18358575	18358576	1	T	core_nonrep	20	1	1
Rue3-1-31	2	18359708	18359709	1	G	core_nonrep	6	1	1
Rue3-1-31	2	18361865	18361866	1	A	core_nonrep	6	1	1
Rue3-1-31	2	18364121	18364122	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18368665	18368666	1	T	core_nonrep	7	1	1
Rue3-1-31	2	18371822	18371823	1	T	nonrep	3	0.75	1
Rue3-1-31	2	18372827	18372828	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18372828	18372829	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18375844	18375845	1	C	core_nonrep	4	0.75	1
Rue3-1-31	2	18388192	18388193	1	C	core_nonrep	14	0.833333	1
Rue3-1-31	2	18398633	18398634	1	G	nonrep	4	1	1
Rue3-1-31	2	18400929	18400930	1	G	core_nonrep	6	0.8	1
Rue3-1-31	2	18407149	18407150	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	18413015	18413016	1	A	core_nonrep	15	1	1
Rue3-1-31	2	18419439	18419440	1	T	core_nonrep	13	0.846154	1
Rue3-1-31	2	18422228	18422229	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18428217	18428218	1	T	core_nonrep	11	1	1
Rue3-1-31	2	18433862	18433863	1	C	core_nonrep	18	1	1
Rue3-1-31	2	18440320	18440321	1	T	core_nonrep	13	1	1
Rue3-1-31	2	18450421	18450422	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	18461821	18461822	1	A	nonrep	5	1	1
Rue3-1-31	2	18464786	18464787	1	T	nonrep	3	0.75	1
Rue3-1-31	2	18466992	18466993	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18467350	18467351	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	2	18468276	18468277	1	T	core_nonrep	8	1	1
Rue3-1-31	2	18468709	18468710	1	G	core_nonrep	5	1	1
Rue3-1-31	2	18470961	18470962	1	G	core_nonrep	4	1	1
Rue3-1-31	2	18471328	18471329	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18471863	18471864	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18479934	18479935	1	T	core_nonrep	4	0.8	1
Rue3-1-31	2	18480956	18480957	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18482177	18482178	1	G	core_nonrep	4	1	1
Rue3-1-31	2	18482576	18482577	1	C	nonrep	3	1	1
Rue3-1-31	2	18485877	18485878	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	2	18485933	18485934	2	GT	core_nonrep	10	0.692308	1
Rue3-1-31	2	18485935	18485936	1	A	core_nonrep	10	0.769231	1
Rue3-1-31	2	18489881	18489882	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18496156	18496157	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	2	18523571	18523572	1	T	core_nonrep	3	1	1
Rue3-1-31	2	18531283	18531284	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18532471	18532472	2	TT	nonrep	6	1	1
Rue3-1-31	2	18539283	18539284	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18572065	18572066	3	CAA	core_nonrep	13	1	1
Rue3-1-31	2	18577704	18577705	1	A	nonrep	3	0.75	1
Rue3-1-31	2	18594725	18594726	1	A	nonrep	3	1	1
Rue3-1-31	2	18597713	18597714	1	A	core_nonrep	9	0.75	1
Rue3-1-31	2	18603219	18603220	1	A	core_nonrep	14	1	1
Rue3-1-31	2	18605818	18605819	2	TT	core_nonrep	8	1	1
Rue3-1-31	2	18606429	18606430	1	A	core_nonrep	5	1	1
Rue3-1-31	2	18607763	18607764	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18609025	18609026	1	A	core_nonrep	3	1	1
Rue3-1-31	2	18609114	18609115	1	G	core_nonrep	4	1	1
Rue3-1-31	2	18609618	18609619	1	T	core_nonrep	11	0.9	1
Rue3-1-31	2	18618543	18618544	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	2	18639447	18639448	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	18653851	18653852	1	A	core_nonrep	6	1	1
Rue3-1-31	2	18654158	18654159	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	18666180	18666181	3	AAA	core_nonrep	9	1	1.09091
Rue3-1-31	2	18678485	18678486	1	C	core_nonrep	12	1	1
Rue3-1-31	2	18687800	18687801	1	C	core_nonrep	11	1	1
Rue3-1-31	2	18698286	18698287	1	A	core_nonrep	4	1	1
Rue3-1-31	2	18703950	18703951	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	18708094	18708095	1	T	core_nonrep	3	1	1
Rue3-1-31	2	18714953	18714954	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	18722174	18722175	2	AG	core_nonrep	5	1	1
Rue3-1-31	2	18722999	18723000	1	A	core_nonrep	6	0.75	1
Rue3-1-31	2	18724975	18724976	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18725631	18725632	1	G	core_nonrep	12	0.916667	1
Rue3-1-31	2	18734593	18734594	1	A	core_nonrep	6	1	1
Rue3-1-31	2	18740398	18740399	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	18741053	18741054	1	T	core_nonrep	4	1	1
Rue3-1-31	2	18757725	18757726	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18780408	18780409	1	T	nonrep	4	0.8	1
Rue3-1-31	2	18796471	18796472	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	2	18816455	18816456	1	C	core_nonrep	12	1	1
Rue3-1-31	2	18817574	18817575	1	T	core_nonrep	6	1	1
Rue3-1-31	2	18829846	18829847	2	CG	core_nonrep	12	1	1
Rue3-1-31	2	18848091	18848092	1	T	core_nonrep	15	1	1
Rue3-1-31	2	18855983	18855984	1	T	core_nonrep	7	1	1
Rue3-1-31	2	18874981	18874982	1	T	core_nonrep	7	1	1
Rue3-1-31	2	18875494	18875495	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	18876015	18876016	1	T	core_nonrep	5	1	1
Rue3-1-31	2	18888956	18888957	1	C	core_nonrep	11	1	1
Rue3-1-31	2	18896829	18896830	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	2	18900844	18900845	1	G	core_nonrep	6	1	1
Rue3-1-31	2	18900857	18900858	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	18902403	18902404	1	G	core_nonrep	11	1	1
Rue3-1-31	2	18902717	18902718	1	T	core_nonrep	8	1	1
Rue3-1-31	2	18914616	18914617	1	C	core_nonrep	8	1	1
Rue3-1-31	2	18941694	18941695	1	A	core_nonrep	3	1	1
Rue3-1-31	2	18945099	18945100	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	2	18945105	18945106	1	A	core_nonrep	6	1	1
Rue3-1-31	2	18951985	18951986	1	C	core_nonrep	15	1	1
Rue3-1-31	2	18951986	18951987	2	AA	core_nonrep	14	0.866667	1
Rue3-1-31	2	18957561	18957562	2	AA	core_nonrep	7	1	1
Rue3-1-31	2	18964835	18964836	1	G	core_nonrep	6	1	1.16667
Rue3-1-31	2	18965131	18965132	1	A	core_nonrep	7	1	1
Rue3-1-31	2	18969290	18969291	1	T	core_nonrep	3	0.75	1
Rue3-1-31	2	18977918	18977919	1	G	core_nonrep	11	1	1
Rue3-1-31	2	18981462	18981463	2	AT	core_nonrep	4	1	1
Rue3-1-31	2	18981502	18981503	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	2	18981656	18981657	1	A	core_nonrep	12	1	1
Rue3-1-31	2	18983732	18983733	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	2	18986168	18986169	1	A	core_nonrep	7	1	1
Rue3-1-31	2	18997761	18997762	1	C	core_nonrep	13	0.923077	1
Rue3-1-31	2	19001975	19001976	1	T	core_nonrep	8	0.7	1
Rue3-1-31	2	19002191	19002192	2	AC	core_nonrep	7	1	1
Rue3-1-31	2	19002226	19002227	1	A	core_nonrep	5	1	1
Rue3-1-31	2	19006014	19006015	1	G	core_nonrep	9	1	1
Rue3-1-31	2	19016211	19016212	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	2	19025787	19025788	1	A	core_nonrep	4	1	1
Rue3-1-31	2	19025789	19025790	1	G	core_nonrep	4	0.8	1
Rue3-1-31	2	19026553	19026554	1	C	core_nonrep	7	0.8	1
Rue3-1-31	2	19037203	19037204	1	T	nonrep	3	0.75	1
Rue3-1-31	2	19038830	19038831	1	A	core_nonrep	8	1	1
Rue3-1-31	2	19042820	19042821	1	G	core_nonrep	21	1	1
Rue3-1-31	2	19045594	19045595	1	T	core_nonrep	12	1	1
Rue3-1-31	2	19057368	19057369	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	2	19064562	19064563	2	TA	core_nonrep	6	0.75	1
Rue3-1-31	2	19064884	19064885	1	T	core_nonrep	3	1	1
Rue3-1-31	2	19077692	19077693	1	C	core_nonrep	11	1	1
Rue3-1-31	2	19088481	19088482	1	T	core_nonrep	11	1	1.05882
Rue3-1-31	2	19097966	19097967	1	A	core_nonrep	5	1	1
Rue3-1-31	2	19101748	19101749	1	T	nonrep	3	1	1
Rue3-1-31	2	19102419	19102420	1	A	core_nonrep	4	0.8	1
Rue3-1-31	2	19108053	19108054	1	G	nonrep	6	0.857143	1
Rue3-1-31	2	19109316	19109317	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	2	19110769	19110770	1	A	core_nonrep	6	1	1
Rue3-1-31	2	19111770	19111771	1	A	core_nonrep	5	0.8	1
Rue3-1-31	2	19116174	19116175	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	2	19118073	19118074	1	A	core_nonrep	12	1	1
Rue3-1-31	2	19140467	19140468	1	C	nonrep	3	0.75	1
Rue3-1-31	2	19145749	19145750	1	C	core_nonrep	14	0.8	1
Rue3-1-31	2	19155206	19155207	1	T	core_nonrep	10	1	1
Rue3-1-31	2	19159953	19159954	1	A	core_nonrep	4	1	1
Rue3-1-31	2	19167894	19167895	1	G	core_nonrep	5	0.75	1
Rue3-1-31	2	19174556	19174557	1	T	core_nonrep	3	1	1
Rue3-1-31	2	19218693	19218694	1	G	nonrep	3	1	1
Rue3-1-31	2	19237564	19237565	1	G	core_nonrep	19	0.9375	1
Rue3-1-31	2	19408291	19408292	2	AA	core_nonrep	11	1	1
Rue3-1-31	2	19414518	19414519	2	GA	core_nonrep	6	1	1
Rue3-1-31	2	19416828	19416829	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	2	19418581	19418582	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	19458554	19458555	1	A	core_nonrep	12	1	1
Rue3-1-31	2	19468484	19468485	3	AAG	core_nonrep	8	0.888889	1
Rue3-1-31	2	19473067	19473068	1	A	core_nonrep	5	1	1
Rue3-1-31	2	19479446	19479447	1	A	core_nonrep	4	1	1
Rue3-1-31	2	19485078	19485079	1	A	core_nonrep	3	1	1
Rue3-1-31	2	19497444	19497445	1	A	nonrep	3	0.75	1
Rue3-1-31	2	19497858	19497859	1	A	core_nonrep	9	1	1
Rue3-1-31	2	19498622	19498623	1	T	core_nonrep	10	1	1
Rue3-1-31	2	19499119	19499120	2	GG	core_nonrep	3	1	1
Rue3-1-31	2	19499184	19499185	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	2	19501467	19501468	1	T	core_nonrep	18	1	1
Rue3-1-31	2	19505427	19505428	1	G	core_nonrep	7	1	1
Rue3-1-31	2	19550893	19550894	1	A	core_nonrep	3	0.75	1
Rue3-1-31	2	19550929	19550930	1	T	core_nonrep	5	1	1
Rue3-1-31	2	19554478	19554479	1	A	core_nonrep	6	1	1
Rue3-1-31	2	19565760	19565761	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	2	19575436	19575437	1	T	core_nonrep	6	1	1
Rue3-1-31	2	19580127	19580128	2	TT	core_nonrep	3	1	1
Rue3-1-31	2	19584115	19584116	1	A	core_nonrep	6	1	1
Rue3-1-31	2	19593258	19593259	2	GA	core_nonrep	8	0.857143	1
Rue3-1-31	2	19598523	19598524	1	T	core_nonrep	10	1	1
Rue3-1-31	2	19606002	19606003	2	TC	core_nonrep	8	0.8	1
Rue3-1-31	2	19614314	19614315	1	C	core_nonrep	12	1	1
Rue3-1-31	2	19624719	19624720	1	T	core_nonrep	27	1	1
Rue3-1-31	2	19629497	19629498	1	T	nonrep	4	0.8	1
Rue3-1-31	2	19630784	19630785	2	TA	core_nonrep	6	1	1
Rue3-1-31	2	19630950	19630951	1	C	core_nonrep	8	1	1
Rue3-1-31	2	19657171	19657172	2	GA	core_nonrep	7	0.777778	1
Rue3-1-31	2	19658354	19658355	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	2	19703190	19703191	1	A	core_nonrep	9	0.75	1
Rue3-1-31	3	24704	24705	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	3	24859	24860	1	A	core_nonrep	7	1	1
Rue3-1-31	3	26174	26175	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	35160	35161	1	T	core_nonrep	6	1	1
Rue3-1-31	3	35189	35190	1	G	core_nonrep	10	1	1
Rue3-1-31	3	37868	37869	1	C	core_nonrep	20	1	1
Rue3-1-31	3	43117	43118	2	AC	core_nonrep	8	1	1
Rue3-1-31	3	43330	43331	1	T	core_nonrep	5	1	1
Rue3-1-31	3	43428	43429	1	A	core_nonrep	6	1	1
Rue3-1-31	3	45399	45400	1	C	core_nonrep	8	1	1
Rue3-1-31	3	48921	48922	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	54412	54413	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	61612	61613	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	69255	69256	1	C	core_nonrep	16	0.857143	1
Rue3-1-31	3	71688	71689	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	82017	82018	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	82506	82507	1	T	core_nonrep	5	1	1
Rue3-1-31	3	84874	84875	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	89716	89717	1	A	core_nonrep	8	1	1
Rue3-1-31	3	91916	91917	1	A	core_nonrep	17	0.916667	1
Rue3-1-31	3	97002	97003	1	G	core_nonrep	17	1	1
Rue3-1-31	3	112160	112161	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	119202	119203	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	3	122603	122604	1	T	nonrep	3	1	1
Rue3-1-31	3	122895	122896	1	C	core_nonrep	3	1	1
Rue3-1-31	3	123220	123221	1	A	core_nonrep	3	1	1
Rue3-1-31	3	123223	123224	1	T	core_nonrep	3	1	1
Rue3-1-31	3	128698	128699	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	128773	128774	2	TA	core_nonrep	11	1	1
Rue3-1-31	3	131874	131875	1	G	core_nonrep	3	1	1
Rue3-1-31	3	150750	150751	1	G	core_nonrep	6	1	1
Rue3-1-31	3	150820	150821	1	A	core_nonrep	3	1	1
Rue3-1-31	3	155081	155082	1	A	core_nonrep	12	1	1
Rue3-1-31	3	158894	158895	1	G	core_nonrep	7	1	1
Rue3-1-31	3	169660	169661	1	C	core_nonrep	6	1	1
Rue3-1-31	3	187212	187213	1	T	core_nonrep	3	1	1
Rue3-1-31	3	209812	209813	1	A	core_nonrep	12	0.75	1
Rue3-1-31	3	225569	225570	1	A	core_nonrep	8	1	1
Rue3-1-31	3	269129	269130	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	3	299556	299557	1	T	core_nonrep	5	1	1
Rue3-1-31	3	304976	304977	3	TAT	core_nonrep	6	0.833333	1
Rue3-1-31	3	323554	323555	1	T	core_nonrep	4	1	1
Rue3-1-31	3	325236	325237	2	GG	core_nonrep	6	1	1
Rue3-1-31	3	327164	327165	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	3	327201	327202	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	3	327310	327311	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	327460	327461	1	G	core_nonrep	5	1	1
Rue3-1-31	3	327569	327570	1	A	core_nonrep	8	1	1
Rue3-1-31	3	337309	337310	3	CAT	core_nonrep	11	0.909091	1
Rue3-1-31	3	344898	344899	1	A	core_nonrep	15	0.933333	1
Rue3-1-31	3	349934	349935	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	429345	429346	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	462841	462842	1	G	core_nonrep	19	1	1
Rue3-1-31	3	466494	466495	1	G	core_nonrep	14	1	1
Rue3-1-31	3	468560	468561	1	T	core_nonrep	3	1	1
Rue3-1-31	3	481319	481320	1	C	core_nonrep	9	1	1
Rue3-1-31	3	495458	495459	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	497632	497633	1	G	core_nonrep	10	1	1
Rue3-1-31	3	505526	505527	2	AA	core_nonrep	8	0.75	1
Rue3-1-31	3	518608	518609	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	518983	518984	1	A	core_nonrep	4	1	1
Rue3-1-31	3	519597	519598	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	3	521370	521371	1	A	core_nonrep	5	1	1
Rue3-1-31	3	530008	530009	1	A	core_nonrep	7	1	1
Rue3-1-31	3	538280	538281	1	A	core_nonrep	9	1	1
Rue3-1-31	3	545045	545046	1	A	core_nonrep	3	1	1
Rue3-1-31	3	559144	559145	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	581339	581340	1	T	core_nonrep	7	1	1
Rue3-1-31	3	582537	582538	1	C	core_nonrep	9	1	1
Rue3-1-31	3	593469	593470	1	A	core_nonrep	10	1	1
Rue3-1-31	3	596166	596167	1	C	core_nonrep	9	1	1
Rue3-1-31	3	625215	625216	1	C	core_nonrep	6	1	1
Rue3-1-31	3	631002	631003	1	A	nonrep	3	0.75	1
Rue3-1-31	3	639544	639545	2	AT	core_nonrep	5	0.714286	1
Rue3-1-31	3	645743	645744	1	T	core_nonrep	7	1	1
Rue3-1-31	3	648031	648032	1	A	nonrep	7	0.777778	1
Rue3-1-31	3	648115	648116	1	A	nonrep	3	0.75	1
Rue3-1-31	3	649855	649856	2	TC	core_nonrep	5	0.714286	1
Rue3-1-31	3	654694	654695	1	A	core_nonrep	12	0.875	1
Rue3-1-31	3	659993	659994	1	C	core_nonrep	3	1	1
Rue3-1-31	3	663951	663952	1	A	core_nonrep	5	1	1
Rue3-1-31	3	674199	674200	1	A	core_nonrep	7	1	1
Rue3-1-31	3	676441	676442	1	T	core_nonrep	12	0.846154	1
Rue3-1-31	3	678800	678801	1	G	core_nonrep	7	0.714286	1
Rue3-1-31	3	680839	680840	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	3	684652	684653	1	G	core_nonrep	23	1	1
Rue3-1-31	3	697155	697156	1	G	core_nonrep	14	0.866667	1
Rue3-1-31	3	697156	697157	1	T	core_nonrep	14	0.933333	1
Rue3-1-31	3	720130	720131	1	A	nonrep	3	0.75	1
Rue3-1-31	3	735363	735364	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	756609	756610	1	A	core_nonrep	3	1	1
Rue3-1-31	3	758505	758506	1	T	core_nonrep	6	1	1
Rue3-1-31	3	759672	759673	1	T	core_nonrep	3	1	1
Rue3-1-31	3	760625	760626	1	T	core_nonrep	3	1	1
Rue3-1-31	3	760632	760633	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	763834	763835	1	T	core_nonrep	11	1	1
Rue3-1-31	3	765538	765539	2	AT	core_nonrep	6	0.833333	1
Rue3-1-31	3	769585	769586	1	A	core_nonrep	9	1	1
Rue3-1-31	3	792607	792608	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	798151	798152	1	A	core_nonrep	6	1	1
Rue3-1-31	3	799499	799500	1	A	core_nonrep	5	1	1
Rue3-1-31	3	801400	801401	1	C	core_nonrep	11	0.9	1
Rue3-1-31	3	824497	824498	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	830780	830781	1	A	core_nonrep	9	1	1
Rue3-1-31	3	835326	835327	1	C	core_nonrep	5	1	1
Rue3-1-31	3	840733	840734	1	G	core_nonrep	6	0.8	1
Rue3-1-31	3	840892	840893	1	T	core_nonrep	4	1	1
Rue3-1-31	3	841087	841088	1	A	nonrep	3	0.75	1
Rue3-1-31	3	846442	846443	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	3	863890	863891	1	A	core_nonrep	7	1	1
Rue3-1-31	3	865693	865694	1	T	core_nonrep	9	1	1
Rue3-1-31	3	872590	872591	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	873425	873426	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	3	876561	876562	1	T	core_nonrep	3	1	1
Rue3-1-31	3	911200	911201	1	T	core_nonrep	7	1	1
Rue3-1-31	3	913899	913900	1	T	core_nonrep	6	1	1
Rue3-1-31	3	965504	965505	1	T	core_nonrep	6	1	1
Rue3-1-31	3	970049	970050	1	C	core_nonrep	18	0.933333	1
Rue3-1-31	3	975281	975282	1	G	core_nonrep	10	0.9	1
Rue3-1-31	3	976313	976314	1	T	nonrep	3	0.75	1
Rue3-1-31	3	976832	976833	1	A	core_nonrep	5	1	1
Rue3-1-31	3	977248	977249	1	A	core_nonrep	13	0.846154	1
Rue3-1-31	3	979529	979530	1	A	core_nonrep	4	1	1
Rue3-1-31	3	980907	980908	1	G	core_nonrep	6	1	1
Rue3-1-31	3	980924	980925	1	T	core_nonrep	11	1	1
Rue3-1-31	3	981643	981644	1	T	core_nonrep	5	1	1
Rue3-1-31	3	981828	981829	2	AC	core_nonrep	4	1	1
Rue3-1-31	3	983048	983049	2	TT	core_nonrep	8	1	1
Rue3-1-31	3	993012	993013	1	T	core_nonrep	11	1	1
Rue3-1-31	3	993356	993357	1	A	core_nonrep	5	1	1
Rue3-1-31	3	995452	995453	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1002565	1002566	1	A	core_nonrep	10	1	1
Rue3-1-31	3	1023920	1023921	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	3	1024320	1024321	1	G	core_nonrep	11	1	1
Rue3-1-31	3	1026769	1026770	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1027345	1027346	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	1027718	1027719	2	TA	core_nonrep	6	1	1
Rue3-1-31	3	1028735	1028736	2	TT	core_nonrep	7	0.833333	1
Rue3-1-31	3	1032580	1032581	2	TT	core_nonrep	10	1	1
Rue3-1-31	3	1035160	1035161	1	T	core_nonrep	4	1	1
Rue3-1-31	3	1052399	1052400	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1054190	1054191	1	C	core_nonrep	4	1	1
Rue3-1-31	3	1056888	1056889	1	T	core_nonrep	8	1	1
Rue3-1-31	3	1058842	1058843	1	C	nonrep	3	1	1
Rue3-1-31	3	1060686	1060687	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1091789	1091790	2	GA	core_nonrep	10	0.727273	1
Rue3-1-31	3	1101174	1101175	1	C	core_nonrep	12	0.923077	1.17647
Rue3-1-31	3	1106396	1106397	2	GA	core_nonrep	4	1	1
Rue3-1-31	3	1121727	1121728	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	1121733	1121734	1	G	core_nonrep	6	1	1
Rue3-1-31	3	1138118	1138119	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	1141387	1141388	2	TC	core_nonrep	7	1	1
Rue3-1-31	3	1143665	1143666	1	G	core_nonrep	5	1	1
Rue3-1-31	3	1157566	1157567	1	C	core_nonrep	24	0.904762	1
Rue3-1-31	3	1161560	1161561	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	3	1163745	1163746	1	C	core_nonrep	11	0.75	1
Rue3-1-31	3	1163746	1163747	1	A	core_nonrep	11	0.75	1
Rue3-1-31	3	1199452	1199453	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	1200190	1200191	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1200939	1200940	1	G	core_nonrep	11	1	1
Rue3-1-31	3	1201033	1201034	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	3	1207768	1207769	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	1216746	1216747	1	A	core_nonrep	10	1	1
Rue3-1-31	3	1216964	1216965	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	1233265	1233266	1	G	core_nonrep	3	1	1
Rue3-1-31	3	1247660	1247661	1	T	core_nonrep	14	1	1
Rue3-1-31	3	1250074	1250075	1	G	core_nonrep	4	1	1
Rue3-1-31	3	1251257	1251258	1	A	core_nonrep	17	0.866667	1
Rue3-1-31	3	1251293	1251294	1	G	core_nonrep	17	1	1
Rue3-1-31	3	1253111	1253112	1	G	core_nonrep	14	1	1
Rue3-1-31	3	1254549	1254550	1	A	core_nonrep	8	1	1
Rue3-1-31	3	1256522	1256523	1	T	core_nonrep	14	1	1
Rue3-1-31	3	1256808	1256809	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	1276798	1276799	1	A	nonrep	6	0.75	1
Rue3-1-31	3	1288995	1288996	1	A	core_nonrep	7	1	1
Rue3-1-31	3	1292307	1292308	1	G	core_nonrep	6	1	1
Rue3-1-31	3	1292811	1292812	1	A	core_nonrep	5	1	1
Rue3-1-31	3	1306737	1306738	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	1306952	1306953	1	A	core_nonrep	5	1	1
Rue3-1-31	3	1326013	1326014	1	T	core_nonrep	12	1	1
Rue3-1-31	3	1326149	1326150	1	A	core_nonrep	14	1	1
Rue3-1-31	3	1331260	1331261	2	TA	core_nonrep	7	1	1
Rue3-1-31	3	1340473	1340474	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	1344467	1344468	1	T	core_nonrep	15	1	1
Rue3-1-31	3	1350506	1350507	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	1352493	1352494	1	A	core_nonrep	13	1	1
Rue3-1-31	3	1358454	1358455	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	1361086	1361087	1	C	core_nonrep	4	0.75	1
Rue3-1-31	3	1362021	1362022	1	G	core_nonrep	13	0.909091	1
Rue3-1-31	3	1364959	1364960	1	A	core_nonrep	3	1	1
Rue3-1-31	3	1365479	1365480	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	1384847	1384848	1	A	core_nonrep	4	1	1
Rue3-1-31	3	1386981	1386982	2	CC	core_nonrep	6	0.8	1
Rue3-1-31	3	1392454	1392455	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	1414785	1414786	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	1415759	1415760	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1426297	1426298	1	A	core_nonrep	17	1	1
Rue3-1-31	3	1426991	1426992	1	C	core_nonrep	19	0.764706	1
Rue3-1-31	3	1427596	1427597	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	1430278	1430279	1	A	core_nonrep	3	1	1
Rue3-1-31	3	1430391	1430392	2	AT	core_nonrep	5	1	1
Rue3-1-31	3	1437715	1437716	1	A	core_nonrep	11	1	1
Rue3-1-31	3	1439471	1439472	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	1441505	1441506	1	A	nonrep	4	0.8	1
Rue3-1-31	3	1442889	1442890	1	T	core_nonrep	4	1	1
Rue3-1-31	3	1443040	1443041	1	T	nonrep	3	0.75	1
Rue3-1-31	3	1446392	1446393	2	AC	core_nonrep	4	0.8	1
Rue3-1-31	3	1447224	1447225	1	C	core_nonrep	3	1	1
Rue3-1-31	3	1447273	1447274	1	T	core_nonrep	3	1	1
Rue3-1-31	3	1447385	1447386	3	AAA	core_nonrep	3	1	1
Rue3-1-31	3	1450908	1450909	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1451048	1451049	1	A	core_nonrep	7	1	1
Rue3-1-31	3	1451504	1451505	1	A	nonrep	3	0.75	1
Rue3-1-31	3	1452486	1452487	1	G	core_nonrep	5	1	1
Rue3-1-31	3	1452690	1452691	1	G	core_nonrep	8	1	1
Rue3-1-31	3	1453008	1453009	1	T	core_nonrep	3	1	1
Rue3-1-31	3	1457883	1457884	1	A	core_nonrep	7	1	1
Rue3-1-31	3	1460406	1460407	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	1476797	1476798	1	C	core_nonrep	8	1	1
Rue3-1-31	3	1479097	1479098	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1481151	1481152	1	T	core_nonrep	8	1	1
Rue3-1-31	3	1481894	1481895	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	1482819	1482820	1	A	core_nonrep	4	1	1
Rue3-1-31	3	1486731	1486732	1	T	core_nonrep	7	1	1
Rue3-1-31	3	1492284	1492285	1	A	core_nonrep	12	1	1
Rue3-1-31	3	1496617	1496618	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	1499900	1499901	1	C	core_nonrep	7	0.7	1
Rue3-1-31	3	1500318	1500319	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1508538	1508539	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	3	1513536	1513537	2	AA	core_nonrep	5	0.714286	1
Rue3-1-31	3	1519173	1519174	1	T	core_nonrep	9	0.833333	1
Rue3-1-31	3	1539670	1539671	2	TC	core_nonrep	6	0.714286	1
Rue3-1-31	3	1540125	1540126	1	G	core_nonrep	4	1	1
Rue3-1-31	3	1545660	1545661	3	GAA	core_nonrep	17	0.85	1
Rue3-1-31	3	1548868	1548869	1	A	core_nonrep	5	1	1
Rue3-1-31	3	1553284	1553285	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1554156	1554157	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1562301	1562302	1	T	core_nonrep	13	1	1
Rue3-1-31	3	1568966	1568967	1	C	core_nonrep	7	1	1
Rue3-1-31	3	1581002	1581003	2	AA	core_nonrep	20	1	1
Rue3-1-31	3	1583403	1583404	1	G	nonrep	3	0.75	1
Rue3-1-31	3	1584099	1584100	1	T	core_nonrep	4	1	1
Rue3-1-31	3	1584574	1584575	1	A	core_nonrep	4	1	1
Rue3-1-31	3	1584636	1584637	2	TG	core_nonrep	8	1	1
Rue3-1-31	3	1590768	1590769	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	1591182	1591183	1	T	core_nonrep	8	1	1
Rue3-1-31	3	1594200	1594201	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	1601323	1601324	1	T	core_nonrep	6	0.8	1
Rue3-1-31	3	1606453	1606454	1	C	core_nonrep	9	0.875	1
Rue3-1-31	3	1608363	1608364	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1625273	1625274	2	AC	core_nonrep	10	1	1
Rue3-1-31	3	1628575	1628576	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	3	1643951	1643952	1	C	core_nonrep	7	1	1
Rue3-1-31	3	1648980	1648981	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	1653544	1653545	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1666731	1666732	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	1674149	1674150	2	CG	core_nonrep	8	1	1
Rue3-1-31	3	1684515	1684516	1	T	core_nonrep	4	1	1
Rue3-1-31	3	1686941	1686942	1	A	core_nonrep	8	0.875	1
Rue3-1-31	3	1692549	1692550	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	1693969	1693970	1	A	core_nonrep	8	0.875	1
Rue3-1-31	3	1704003	1704004	1	T	nonrep	3	0.75	1
Rue3-1-31	3	1714716	1714717	1	A	core_nonrep	7	1	1
Rue3-1-31	3	1726761	1726762	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	3	1729638	1729639	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	1730021	1730022	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	3	1746922	1746923	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	1748503	1748504	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1793683	1793684	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	1795019	1795020	1	C	core_nonrep	7	1	1
Rue3-1-31	3	1795051	1795052	1	T	core_nonrep	5	1	1
Rue3-1-31	3	1797378	1797379	1	A	nonrep	3	1	1
Rue3-1-31	3	1799596	1799597	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	3	1800211	1800212	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	3	1800266	1800267	1	A	core_nonrep	5	1	1
Rue3-1-31	3	1800409	1800410	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1800411	1800412	2	CC	core_nonrep	6	1	1
Rue3-1-31	3	1806075	1806076	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	1807720	1807721	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1808107	1808108	3	AAT	core_nonrep	5	1	1
Rue3-1-31	3	1808186	1808187	3	TAA	core_nonrep	6	1	1
Rue3-1-31	3	1808284	1808285	1	T	core_nonrep	9	0.875	1
Rue3-1-31	3	1810222	1810223	1	A	core_nonrep	4	1	1
Rue3-1-31	3	1810223	1810224	1	C	core_nonrep	4	1	1
Rue3-1-31	3	1811701	1811702	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	3	1815252	1815253	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	1815412	1815413	1	A	core_nonrep	6	1	1
Rue3-1-31	3	1820106	1820107	1	G	core_nonrep	11	0.875	1
Rue3-1-31	3	1824289	1824290	1	T	core_nonrep	9	0.8	1
Rue3-1-31	3	1837799	1837800	1	T	core_nonrep	6	1	1
Rue3-1-31	3	1843310	1843311	1	A	core_nonrep	7	1	1
Rue3-1-31	3	1849616	1849617	2	GA	core_nonrep	4	1	1
Rue3-1-31	3	1855172	1855173	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	1860947	1860948	1	C	nonrep	5	0.833333	1
Rue3-1-31	3	1861590	1861591	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	1866027	1866028	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	1898109	1898110	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	1903617	1903618	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	1933528	1933529	2	TC	core_nonrep	8	1	1
Rue3-1-31	3	1935786	1935787	1	A	core_nonrep	3	1	1
Rue3-1-31	3	1957855	1957856	1	T	core_nonrep	15	0.833333	1
Rue3-1-31	3	1976062	1976063	2	AG	core_nonrep	3	1	1
Rue3-1-31	3	1996606	1996607	1	C	core_nonrep	4	1	1
Rue3-1-31	3	2010265	2010266	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	2050050	2050051	1	C	nonrep	6	0.75	1
Rue3-1-31	3	2056662	2056663	1	T	core_nonrep	4	1	1
Rue3-1-31	3	2078426	2078427	1	T	core_nonrep	4	1	1
Rue3-1-31	3	2083090	2083091	1	A	core_nonrep	12	0.769231	1
Rue3-1-31	3	2087560	2087561	1	A	core_nonrep	10	0.875	1
Rue3-1-31	3	2088194	2088195	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2092864	2092865	1	A	core_nonrep	6	1	1
Rue3-1-31	3	2094062	2094063	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2094274	2094275	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2094376	2094377	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	2095222	2095223	1	G	core_nonrep	3	1	1
Rue3-1-31	3	2096069	2096070	1	A	core_nonrep	7	1	1
Rue3-1-31	3	2096071	2096072	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	2096076	2096077	1	A	core_nonrep	10	1	1
Rue3-1-31	3	2097097	2097098	1	T	core_nonrep	4	1	1
Rue3-1-31	3	2097896	2097897	1	A	core_nonrep	9	0.875	1
Rue3-1-31	3	2100084	2100085	1	G	core_nonrep	9	0.727273	1
Rue3-1-31	3	2101624	2101625	1	A	core_nonrep	6	1	1
Rue3-1-31	3	2102701	2102702	3	GAA	core_nonrep	8	0.7	1
Rue3-1-31	3	2125962	2125963	1	G	core_nonrep	14	1	1
Rue3-1-31	3	2126519	2126520	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2132551	2132552	1	A	core_nonrep	9	1	1
Rue3-1-31	3	2142516	2142517	2	TA	core_nonrep	7	1	1
Rue3-1-31	3	2142517	2142518	1	A	core_nonrep	7	1	1
Rue3-1-31	3	2173016	2173017	1	A	core_nonrep	3	1	1
Rue3-1-31	3	2173017	2173018	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	2179075	2179076	1	T	core_nonrep	8	1	1
Rue3-1-31	3	2205627	2205628	1	T	core_nonrep	12	0.692308	1.05263
Rue3-1-31	3	2205932	2205933	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	2217058	2217059	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	2230586	2230587	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	3	2232148	2232149	1	T	core_nonrep	9	1	1
Rue3-1-31	3	2233250	2233251	1	G	core_nonrep	7	1	1
Rue3-1-31	3	2236295	2236296	1	C	core_nonrep	7	1	1
Rue3-1-31	3	2237441	2237442	1	T	nonrep	3	0.75	1
Rue3-1-31	3	2245631	2245632	1	T	core_nonrep	12	0.75	1
Rue3-1-31	3	2254112	2254113	2	AA	core_nonrep	7	1	1
Rue3-1-31	3	2279949	2279950	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2283514	2283515	2	GT	core_nonrep	5	0.75	1
Rue3-1-31	3	2290410	2290411	1	T	nonrep	4	0.8	1
Rue3-1-31	3	2302787	2302788	1	G	core_nonrep	13	0.785714	1
Rue3-1-31	3	2307138	2307139	1	A	nonrep	4	1	1
Rue3-1-31	3	2307250	2307251	1	C	core_nonrep	6	1	1
Rue3-1-31	3	2307251	2307252	1	A	core_nonrep	5	1	1
Rue3-1-31	3	2320530	2320531	1	N	core_nonrep	3	0.75	1
Rue3-1-31	3	2321201	2321202	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2321202	2321203	1	G	core_nonrep	4	1	1
Rue3-1-31	3	2329701	2329702	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	3	2329732	2329733	1	A	core_nonrep	10	1	1
Rue3-1-31	3	2337395	2337396	1	A	core_nonrep	10	1	1
Rue3-1-31	3	2339898	2339899	1	T	core_nonrep	18	1	1
Rue3-1-31	3	2348954	2348955	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2348955	2348956	1	A	core_nonrep	7	1	1
Rue3-1-31	3	2353567	2353568	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	2355425	2355426	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	2357731	2357732	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2367986	2367987	1	G	core_nonrep	12	0.909091	1
Rue3-1-31	3	2374165	2374166	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	3	2391086	2391087	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	3	2391087	2391088	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	3	2392649	2392650	1	G	core_nonrep	3	1	1
Rue3-1-31	3	2397796	2397797	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2420630	2420631	1	A	core_nonrep	12	1	1
Rue3-1-31	3	2422212	2422213	1	C	core_nonrep	9	0.875	1
Rue3-1-31	3	2430160	2430161	1	C	core_nonrep	9	1	1
Rue3-1-31	3	2490452	2490453	1	T	core_nonrep	8	1	1
Rue3-1-31	3	2499406	2499407	1	T	core_nonrep	3	1	1
Rue3-1-31	3	2499407	2499408	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	2501883	2501884	1	A	core_nonrep	9	1	1
Rue3-1-31	3	2516000	2516001	1	T	core_nonrep	3	1	1
Rue3-1-31	3	2518962	2518963	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	2523289	2523290	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2534619	2534620	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	2558511	2558512	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	2584483	2584484	1	T	core_nonrep	7	1	1
Rue3-1-31	3	2612646	2612647	1	C	core_nonrep	6	1	1
Rue3-1-31	3	2613926	2613927	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	2614054	2614055	1	C	core_nonrep	7	1	1
Rue3-1-31	3	2617638	2617639	2	CA	core_nonrep	8	0.75	1
Rue3-1-31	3	2627240	2627241	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	3	2637370	2637371	1	C	core_nonrep	5	1	1
Rue3-1-31	3	2645866	2645867	1	T	core_nonrep	10	0.8	1
Rue3-1-31	3	2660213	2660214	1	T	core_nonrep	4	1	1
Rue3-1-31	3	2660261	2660262	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	2664375	2664376	1	G	core_nonrep	6	1	1
Rue3-1-31	3	2664811	2664812	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	2695248	2695249	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	2698164	2698165	2	GA	core_nonrep	11	1	1
Rue3-1-31	3	2700079	2700080	1	G	core_nonrep	7	1	1
Rue3-1-31	3	2702844	2702845	1	G	core_nonrep	15	1	1
Rue3-1-31	3	2704489	2704490	1	T	core_nonrep	10	1	1
Rue3-1-31	3	2705724	2705725	1	A	core_nonrep	12	0.818182	1
Rue3-1-31	3	2707322	2707323	1	C	core_nonrep	9	0.9	1
Rue3-1-31	3	2710238	2710239	1	T	core_nonrep	3	1	1
Rue3-1-31	3	2713171	2713172	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	3	2713243	2713244	1	G	core_nonrep	7	0.714286	1
Rue3-1-31	3	2714459	2714460	1	A	core_nonrep	12	1	1
Rue3-1-31	3	2714613	2714614	1	A	core_nonrep	13	1	1
Rue3-1-31	3	2722275	2722276	1	A	core_nonrep	10	0.9	1
Rue3-1-31	3	2723670	2723671	1	T	core_nonrep	7	1	1
Rue3-1-31	3	2728083	2728084	1	G	core_nonrep	11	1	1
Rue3-1-31	3	2738140	2738141	3	CAG	core_nonrep	4	0.75	1
Rue3-1-31	3	2748027	2748028	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	2752347	2752348	1	T	core_nonrep	7	1	1
Rue3-1-31	3	2754569	2754570	1	T	core_nonrep	5	1	1
Rue3-1-31	3	2756902	2756903	1	G	core_nonrep	6	1	1
Rue3-1-31	3	2793890	2793891	1	A	core_nonrep	4	1	1
Rue3-1-31	3	2799895	2799896	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	2803645	2803646	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	3	2806420	2806421	1	A	core_nonrep	8	1	1
Rue3-1-31	3	2807285	2807286	1	A	core_nonrep	3	1	1
Rue3-1-31	3	2825298	2825299	2	AC	core_nonrep	10	1	1
Rue3-1-31	3	2827424	2827425	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	3	2832998	2832999	1	A	nonrep	3	0.75	1
Rue3-1-31	3	2850190	2850191	1	T	core_nonrep	6	1	1
Rue3-1-31	3	2858018	2858019	1	T	core_nonrep	17	1	1
Rue3-1-31	3	2858020	2858021	1	C	core_nonrep	17	1	1
Rue3-1-31	3	2863559	2863560	1	A	core_nonrep	9	1	1
Rue3-1-31	3	2864127	2864128	1	C	core_nonrep	8	0.875	1
Rue3-1-31	3	2870734	2870735	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	2875812	2875813	1	T	core_nonrep	7	1	1
Rue3-1-31	3	2880802	2880803	1	T	core_nonrep	9	1	1
Rue3-1-31	3	2880812	2880813	1	A	core_nonrep	8	1	1
Rue3-1-31	3	2882281	2882282	1	C	core_nonrep	4	0.75	1
Rue3-1-31	3	2885969	2885970	1	A	core_nonrep	6	1	1
Rue3-1-31	3	2889998	2889999	1	T	core_nonrep	5	1	1
Rue3-1-31	3	2891086	2891087	1	T	core_nonrep	5	1	1
Rue3-1-31	3	2932658	2932659	1	T	core_nonrep	13	0.857143	1
Rue3-1-31	3	2945672	2945673	1	C	core_nonrep	3	1	1
Rue3-1-31	3	2971862	2971863	1	A	core_nonrep	11	0.875	1
Rue3-1-31	3	2974943	2974944	1	A	core_nonrep	10	0.777778	1
Rue3-1-31	3	2989011	2989012	1	A	nonrep	3	0.75	1
Rue3-1-31	3	2997843	2997844	1	A	core_nonrep	10	0.9	1
Rue3-1-31	3	3018823	3018824	1	A	core_nonrep	3	1	1
Rue3-1-31	3	3111687	3111688	1	A	nonrep	3	0.75	1
Rue3-1-31	3	3122253	3122254	1	T	core_nonrep	5	1	1.33333
Rue3-1-31	3	3129542	3129543	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	3130908	3130909	2	GT	core_nonrep	7	0.777778	1
Rue3-1-31	3	3130909	3130910	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	3	3131113	3131114	1	T	core_nonrep	10	1	1
Rue3-1-31	3	3132887	3132888	1	T	core_nonrep	12	1	1
Rue3-1-31	3	3145673	3145674	1	T	core_nonrep	7	1	1
Rue3-1-31	3	3145822	3145823	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	3	3145838	3145839	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	3147483	3147484	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	3147555	3147556	1	G	core_nonrep	8	0.8	1
Rue3-1-31	3	3150394	3150395	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	3	3152518	3152519	1	A	core_nonrep	11	0.777778	1
Rue3-1-31	3	3153312	3153313	1	A	core_nonrep	5	1	1
Rue3-1-31	3	3161923	3161924	1	G	core_nonrep	9	0.818182	1
Rue3-1-31	3	3169449	3169450	1	G	core_nonrep	6	1	1
Rue3-1-31	3	3175004	3175005	1	T	core_nonrep	11	0.785714	1
Rue3-1-31	3	3178289	3178290	1	A	core_nonrep	7	1	1
Rue3-1-31	3	3188581	3188582	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3197858	3197859	1	T	nonrep	4	0.8	1
Rue3-1-31	3	3201780	3201781	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	3205489	3205490	1	A	core_nonrep	4	1	1
Rue3-1-31	3	3221759	3221760	1	C	core_nonrep	6	1	1
Rue3-1-31	3	3223070	3223071	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	3274860	3274861	1	G	core_nonrep	4	1	1
Rue3-1-31	3	3310166	3310167	1	G	core_nonrep	5	1	1
Rue3-1-31	3	3400596	3400597	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	3404087	3404088	1	A	core_nonrep	5	1	1
Rue3-1-31	3	3405599	3405600	1	T	core_nonrep	6	1	1
Rue3-1-31	3	3429953	3429954	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3432862	3432863	1	T	nonrep	3	1	1
Rue3-1-31	3	3443774	3443775	1	G	core_nonrep	6	1	1
Rue3-1-31	3	3444019	3444020	1	T	core_nonrep	6	1	1
Rue3-1-31	3	3450026	3450027	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	3454870	3454871	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3459995	3459996	1	A	core_nonrep	5	1	1
Rue3-1-31	3	3460610	3460611	1	T	core_nonrep	10	1	1
Rue3-1-31	3	3461476	3461477	2	TA	core_nonrep	4	1	1
Rue3-1-31	3	3461739	3461740	1	T	core_nonrep	6	1	1
Rue3-1-31	3	3462360	3462361	1	A	core_nonrep	5	1	1
Rue3-1-31	3	3467179	3467180	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3467259	3467260	1	G	core_nonrep	4	1	1
Rue3-1-31	3	3467467	3467468	1	A	core_nonrep	6	1	1
Rue3-1-31	3	3470116	3470117	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	3470158	3470159	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	3503544	3503545	1	T	core_nonrep	4	1	1
Rue3-1-31	3	3509871	3509872	2	TT	core_nonrep	10	0.888889	1
Rue3-1-31	3	3511378	3511379	1	G	core_nonrep	15	1	1
Rue3-1-31	3	3513316	3513317	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	3514377	3514378	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	3516269	3516270	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3516496	3516497	1	A	core_nonrep	6	1	1
Rue3-1-31	3	3518257	3518258	1	A	core_nonrep	7	1	1
Rue3-1-31	3	3524493	3524494	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	3524495	3524496	1	A	core_nonrep	4	1	1
Rue3-1-31	3	3544860	3544861	1	T	nonrep	3	0.75	1
Rue3-1-31	3	3545800	3545801	1	T	core_nonrep	4	1	1
Rue3-1-31	3	3555592	3555593	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	3	3566578	3566579	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	3575735	3575736	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	3576356	3576357	2	TA	core_nonrep	4	1	1
Rue3-1-31	3	3580594	3580595	1	C	core_nonrep	4	0.75	1
Rue3-1-31	3	3588092	3588093	1	C	core_nonrep	3	1	1
Rue3-1-31	3	3589392	3589393	1	A	core_nonrep	10	1	1
Rue3-1-31	3	3600660	3600661	1	C	core_nonrep	4	1	1
Rue3-1-31	3	3605289	3605290	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	3610423	3610424	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	3621075	3621076	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3621076	3621077	1	C	core_nonrep	7	1	1
Rue3-1-31	3	3625655	3625656	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3629918	3629919	1	T	core_nonrep	8	1	1
Rue3-1-31	3	3642286	3642287	1	A	core_nonrep	10	1	1
Rue3-1-31	3	3648658	3648659	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	3	3653789	3653790	1	A	core_nonrep	5	1	1
Rue3-1-31	3	3655189	3655190	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	3657152	3657153	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	3	3669007	3669008	1	G	core_nonrep	9	1	1
Rue3-1-31	3	3679869	3679870	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	3679871	3679872	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	3681669	3681670	1	C	core_nonrep	21	0.9375	1
Rue3-1-31	3	3682502	3682503	1	A	core_nonrep	9	1	1
Rue3-1-31	3	3687560	3687561	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3690538	3690539	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3690650	3690651	1	T	nonrep	5	0.833333	1
Rue3-1-31	3	3692764	3692765	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	3693903	3693904	1	A	core_nonrep	4	1	1
Rue3-1-31	3	3694577	3694578	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3709297	3709298	1	C	core_nonrep	9	0.714286	1
Rue3-1-31	3	3710934	3710935	1	A	core_nonrep	6	1	1
Rue3-1-31	3	3714819	3714820	3	ATC	core_nonrep	5	0.833333	1
Rue3-1-31	3	3717341	3717342	1	A	core_nonrep	3	1	1
Rue3-1-31	3	3717342	3717343	1	T	core_nonrep	3	1	1
Rue3-1-31	3	3717549	3717550	1	A	core_nonrep	4	1	1
Rue3-1-31	3	3723418	3723419	1	A	core_nonrep	10	1	1
Rue3-1-31	3	3725807	3725808	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	3750611	3750612	1	A	core_nonrep	4	1	1
Rue3-1-31	3	3760703	3760704	1	T	core_nonrep	4	1	1
Rue3-1-31	3	3771715	3771716	1	C	core_nonrep	11	0.857143	1
Rue3-1-31	3	3771717	3771718	1	T	core_nonrep	12	0.9	1
Rue3-1-31	3	3774323	3774324	1	T	core_nonrep	13	1	1
Rue3-1-31	3	3793857	3793858	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	3798944	3798945	1	A	core_nonrep	11	1	1
Rue3-1-31	3	3800722	3800723	1	T	core_nonrep	10	1	1
Rue3-1-31	3	3842677	3842678	1	T	core_nonrep	8	1	1
Rue3-1-31	3	3854854	3854855	1	C	core_nonrep	12	0.769231	1
Rue3-1-31	3	3862505	3862506	1	T	nonrep	3	0.75	1
Rue3-1-31	3	3868538	3868539	2	CA	core_nonrep	20	0.952381	1
Rue3-1-31	3	3885209	3885210	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	3890817	3890818	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	3894476	3894477	1	A	core_nonrep	9	1	1
Rue3-1-31	3	3905829	3905830	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	3911042	3911043	1	T	core_nonrep	5	1	1
Rue3-1-31	3	3917482	3917483	3	TTG	core_nonrep	3	1	1
Rue3-1-31	3	3922375	3922376	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	3	3924623	3924624	2	TT	core_nonrep	11	0.818182	1
Rue3-1-31	3	3937423	3937424	2	TG	nonrep	9	0.818182	1
Rue3-1-31	3	3950616	3950617	2	TG	core_nonrep	4	1	1
Rue3-1-31	3	3964194	3964195	1	T	core_nonrep	4	1	1
Rue3-1-31	3	3964195	3964196	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	3971042	3971043	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	3	4042423	4042424	1	T	nonrep	3	0.75	1
Rue3-1-31	3	4078476	4078477	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4078477	4078478	2	TC	core_nonrep	3	1	1
Rue3-1-31	3	4078776	4078777	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	4082627	4082628	1	A	nonrep	6	0.857143	1
Rue3-1-31	3	4083274	4083275	1	T	core_nonrep	9	1	1
Rue3-1-31	3	4086697	4086698	1	A	core_nonrep	5	1	1
Rue3-1-31	3	4093656	4093657	2	AT	core_nonrep	8	1	1
Rue3-1-31	3	4093657	4093658	1	T	core_nonrep	9	1	1
Rue3-1-31	3	4100748	4100749	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	3	4100749	4100750	2	AA	core_nonrep	12	0.923077	1
Rue3-1-31	3	4102822	4102823	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	4106202	4106203	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	4106282	4106283	1	C	core_nonrep	4	1	1
Rue3-1-31	3	4106284	4106285	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4106350	4106351	1	C	core_nonrep	5	1	1
Rue3-1-31	3	4108533	4108534	1	T	core_nonrep	12	1	1
Rue3-1-31	3	4111826	4111827	1	T	core_nonrep	16	1	1
Rue3-1-31	3	4112035	4112036	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4117945	4117946	1	T	core_nonrep	8	1	1
Rue3-1-31	3	4118442	4118443	1	T	core_nonrep	6	1	1
Rue3-1-31	3	4126426	4126427	1	A	nonrep	3	0.75	1
Rue3-1-31	3	4126898	4126899	2	AT	core_nonrep	8	0.777778	1
Rue3-1-31	3	4126899	4126900	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	3	4127003	4127004	1	T	core_nonrep	4	1	1
Rue3-1-31	3	4128172	4128173	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4134834	4134835	1	A	core_nonrep	15	0.6875	1
Rue3-1-31	3	4137855	4137856	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	4202659	4202660	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	4218428	4218429	1	A	core_nonrep	4	1	1
Rue3-1-31	3	4219351	4219352	2	TC	core_nonrep	4	1	1
Rue3-1-31	3	4219645	4219646	1	G	core_nonrep	7	1	1
Rue3-1-31	3	4219646	4219647	1	C	core_nonrep	7	1	1
Rue3-1-31	3	4231218	4231219	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	4231219	4231220	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	4231483	4231484	2	TA	core_nonrep	7	1	1
Rue3-1-31	3	4231778	4231779	1	G	core_nonrep	7	1	1
Rue3-1-31	3	4251040	4251041	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4288481	4288482	1	A	core_nonrep	8	1	1
Rue3-1-31	3	4292089	4292090	1	G	core_nonrep	13	1	1
Rue3-1-31	3	4295209	4295210	1	G	nonrep	3	0.75	1
Rue3-1-31	3	4310356	4310357	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4427512	4427513	1	T	core_nonrep	8	1	1
Rue3-1-31	3	4486251	4486252	1	C	nonrep	3	1	1
Rue3-1-31	3	4494528	4494529	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	4500160	4500161	1	A	core_nonrep	7	1	1
Rue3-1-31	3	4504809	4504810	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	4506255	4506256	1	A	core_nonrep	7	1	1
Rue3-1-31	3	4506622	4506623	1	T	core_nonrep	5	1	1
Rue3-1-31	3	4507446	4507447	2	TA	nonrep	4	0.8	1
Rue3-1-31	3	4511621	4511622	1	A	core_nonrep	6	1	1
Rue3-1-31	3	4513304	4513305	1	A	core_nonrep	7	1	1
Rue3-1-31	3	4513518	4513519	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	3	4517512	4517513	1	A	core_nonrep	9	1	1
Rue3-1-31	3	4517555	4517556	1	T	core_nonrep	7	1	1
Rue3-1-31	3	4524652	4524653	1	T	core_nonrep	4	1	1
Rue3-1-31	3	4526272	4526273	1	T	core_nonrep	7	1	1
Rue3-1-31	3	4531338	4531339	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	4531342	4531343	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	3	4532566	4532567	1	A	core_nonrep	7	1	1
Rue3-1-31	3	4536934	4536935	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	3	4547399	4547400	1	T	core_nonrep	3	1	1
Rue3-1-31	3	4548685	4548686	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	4579360	4579361	1	A	core_nonrep	3	0.75	1.4
Rue3-1-31	3	4580889	4580890	1	A	core_nonrep	10	1	1
Rue3-1-31	3	4658055	4658056	2	CT	core_nonrep	7	1	1
Rue3-1-31	3	4672089	4672090	1	A	core_nonrep	6	1	1
Rue3-1-31	3	4687448	4687449	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	4688768	4688769	1	T	core_nonrep	4	1	1
Rue3-1-31	3	4707153	4707154	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	4709386	4709387	1	T	nonrep	4	0.8	1
Rue3-1-31	3	4709843	4709844	1	A	nonrep	3	0.75	1
Rue3-1-31	3	4711225	4711226	1	A	core_nonrep	8	0.727273	1
Rue3-1-31	3	4711227	4711228	1	G	core_nonrep	12	0.9	1
Rue3-1-31	3	4711228	4711229	1	T	core_nonrep	12	1	1
Rue3-1-31	3	4711808	4711809	1	T	core_nonrep	9	1	1
Rue3-1-31	3	4724467	4724468	1	C	core_nonrep	9	1	1
Rue3-1-31	3	4724969	4724970	1	C	core_nonrep	11	1	1
Rue3-1-31	3	4750517	4750518	1	T	nonrep	6	0.75	1
Rue3-1-31	3	4771106	4771107	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	4774280	4774281	1	G	core_nonrep	3	1	1
Rue3-1-31	3	4776735	4776736	1	T	core_nonrep	3	1	1
Rue3-1-31	3	4787922	4787923	1	A	core_nonrep	6	1	1
Rue3-1-31	3	4799504	4799505	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	4803542	4803543	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	4827729	4827730	2	TT	core_nonrep	8	0.777778	1
Rue3-1-31	3	4840528	4840529	1	T	nonrep	3	1	1
Rue3-1-31	3	4841010	4841011	1	T	nonrep	3	1	1
Rue3-1-31	3	4841366	4841367	3	ACA	core_nonrep	6	0.833333	1
Rue3-1-31	3	4845532	4845533	1	A	core_nonrep	5	1	1
Rue3-1-31	3	4848485	4848486	1	G	core_nonrep	3	1	1
Rue3-1-31	3	4849762	4849763	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	4849763	4849764	1	T	core_nonrep	8	1	1
Rue3-1-31	3	4851336	4851337	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	3	4856629	4856630	1	A	core_nonrep	4	1	1
Rue3-1-31	3	4862762	4862763	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4863503	4863504	1	T	core_nonrep	12	0.9	1
Rue3-1-31	3	4868615	4868616	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	4873399	4873400	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4873806	4873807	2	AT	core_nonrep	6	0.75	1
Rue3-1-31	3	4874592	4874593	1	T	nonrep	3	0.75	1
Rue3-1-31	3	4874593	4874594	1	A	core_nonrep	3	1	1
Rue3-1-31	3	4878562	4878563	1	A	nonrep	3	0.75	1
Rue3-1-31	3	4889357	4889358	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	3	4918154	4918155	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	3	4944679	4944680	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	4959460	4959461	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	3	4961146	4961147	1	T	core_nonrep	3	1	1
Rue3-1-31	3	4963754	4963755	2	AT	core_nonrep	5	0.75	1
Rue3-1-31	3	4963902	4963903	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	3	4976365	4976366	1	T	nonrep	3	0.75	1
Rue3-1-31	3	4987884	4987885	1	T	nonrep	3	0.75	1
Rue3-1-31	3	5007980	5007981	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5060435	5060436	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5060436	5060437	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5095936	5095937	1	T	core_nonrep	6	0.8	1
Rue3-1-31	3	5108369	5108370	1	T	core_nonrep	4	1	1
Rue3-1-31	3	5119727	5119728	1	A	nonrep	3	1	1
Rue3-1-31	3	5120163	5120164	1	T	core_nonrep	14	1	1
Rue3-1-31	3	5132742	5132743	1	T	core_nonrep	10	1	1
Rue3-1-31	3	5146867	5146868	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	5146869	5146870	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	3	5179655	5179656	2	AA	core_nonrep	7	1	1
Rue3-1-31	3	5183329	5183330	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	3	5183691	5183692	1	A	core_nonrep	4	1	1
Rue3-1-31	3	5211802	5211803	1	A	nonrep	5	1	1
Rue3-1-31	3	5223032	5223033	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5224719	5224720	2	CA	core_nonrep	5	0.833333	1
Rue3-1-31	3	5240334	5240335	1	G	core_nonrep	5	1	1
Rue3-1-31	3	5243074	5243075	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	5265798	5265799	1	A	core_nonrep	7	0.8	1
Rue3-1-31	3	5272731	5272732	1	T	core_nonrep	6	1	1
Rue3-1-31	3	5277596	5277597	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	5282659	5282660	1	G	nonrep	4	0.8	1
Rue3-1-31	3	5288492	5288493	1	A	core_nonrep	22	1	1
Rue3-1-31	3	5288539	5288540	1	T	core_nonrep	13	1	1
Rue3-1-31	3	5293187	5293188	1	A	nonrep	3	0.75	1
Rue3-1-31	3	5297190	5297191	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	3	5302937	5302938	1	C	core_nonrep	3	1	1
Rue3-1-31	3	5303269	5303270	1	T	core_nonrep	5	1	1
Rue3-1-31	3	5303271	5303272	1	G	core_nonrep	5	1	1
Rue3-1-31	3	5308241	5308242	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	3	5309770	5309771	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5311113	5311114	1	T	core_nonrep	15	0.722222	1
Rue3-1-31	3	5311292	5311293	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	3	5354739	5354740	1	T	core_nonrep	7	1	1
Rue3-1-31	3	5363269	5363270	1	G	core_nonrep	12	0.769231	1
Rue3-1-31	3	5371879	5371880	1	T	core_nonrep	6	1	1
Rue3-1-31	3	5372258	5372259	1	A	nonrep	3	0.75	1
Rue3-1-31	3	5372259	5372260	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	5374139	5374140	1	G	core_nonrep	4	0.75	1
Rue3-1-31	3	5376649	5376650	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	5380292	5380293	1	A	core_nonrep	7	1	1
Rue3-1-31	3	5380805	5380806	1	T	core_nonrep	4	1	1
Rue3-1-31	3	5397643	5397644	2	TC	core_nonrep	4	0.8	1
Rue3-1-31	3	5408254	5408255	1	T	core_nonrep	7	1	1
Rue3-1-31	3	5408348	5408349	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	5419408	5419409	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5423312	5423313	1	T	nonrep	6	0.857143	1
Rue3-1-31	3	5426867	5426868	1	T	core_nonrep	6	1	1
Rue3-1-31	3	5438996	5438997	1	G	core_nonrep	6	1	1
Rue3-1-31	3	5456324	5456325	1	G	core_nonrep	4	1	1
Rue3-1-31	3	5469821	5469822	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5471080	5471081	2	GT	core_nonrep	5	1	1
Rue3-1-31	3	5471204	5471205	1	T	core_nonrep	5	1	1
Rue3-1-31	3	5471483	5471484	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	5472458	5472459	1	T	core_nonrep	15	0.818182	1
Rue3-1-31	3	5473207	5473208	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	5478480	5478481	1	A	core_nonrep	16	1	1
Rue3-1-31	3	5480396	5480397	1	A	core_nonrep	8	1	1
Rue3-1-31	3	5480420	5480421	1	A	core_nonrep	12	0.8	1
Rue3-1-31	3	5483552	5483553	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5485967	5485968	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	5487003	5487004	1	T	nonrep	7	0.7	1
Rue3-1-31	3	5489057	5489058	2	AA	core_nonrep	6	0.75	1
Rue3-1-31	3	5490631	5490632	1	C	core_nonrep	9	1	1
Rue3-1-31	3	5496537	5496538	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	5497478	5497479	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5529745	5529746	1	T	core_nonrep	14	1	1
Rue3-1-31	3	5542021	5542022	1	A	core_nonrep	8	0.8	1
Rue3-1-31	3	5552938	5552939	2	CG	core_nonrep	5	0.8	1
Rue3-1-31	3	5559506	5559507	1	A	core_nonrep	10	1	1
Rue3-1-31	3	5564591	5564592	1	T	core_nonrep	4	1	1
Rue3-1-31	3	5564773	5564774	1	A	core_nonrep	6	1	1
Rue3-1-31	3	5566141	5566142	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5569813	5569814	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	5575281	5575282	1	T	core_nonrep	7	1	1
Rue3-1-31	3	5577838	5577839	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5578155	5578156	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5587681	5587682	2	CT	core_nonrep	9	1	1
Rue3-1-31	3	5588370	5588371	1	T	nonrep	4	0.8	1
Rue3-1-31	3	5588933	5588934	1	T	core_nonrep	13	1	1
Rue3-1-31	3	5588944	5588945	1	T	core_nonrep	15	1	1
Rue3-1-31	3	5589439	5589440	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	3	5593237	5593238	1	C	core_nonrep	5	1	1
Rue3-1-31	3	5593245	5593246	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5596938	5596939	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	5599614	5599615	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	5599625	5599626	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	5600008	5600009	1	A	core_nonrep	5	1	1
Rue3-1-31	3	5605677	5605678	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	5606173	5606174	1	A	nonrep	3	1	1
Rue3-1-31	3	5609794	5609795	1	A	core_nonrep	6	1	1
Rue3-1-31	3	5618552	5618553	1	T	core_nonrep	6	1	1
Rue3-1-31	3	5621974	5621975	2	TC	core_nonrep	6	1	1
Rue3-1-31	3	5624181	5624182	1	G	nonrep	3	1	1
Rue3-1-31	3	5624338	5624339	1	G	core_nonrep	3	1	1
Rue3-1-31	3	5627730	5627731	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	5648915	5648916	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5648919	5648920	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5649857	5649858	1	A	core_nonrep	11	0.8	1
Rue3-1-31	3	5684733	5684734	1	A	core_nonrep	7	1	1
Rue3-1-31	3	5685038	5685039	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5686546	5686547	1	A	core_nonrep	3	1	1
Rue3-1-31	3	5686548	5686549	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5689297	5689298	2	AT	core_nonrep	7	0.75	1
Rue3-1-31	3	5689299	5689300	1	G	core_nonrep	7	1	1
Rue3-1-31	3	5709222	5709223	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	5709311	5709312	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	5710382	5710383	2	CA	core_nonrep	5	1	1
Rue3-1-31	3	5715406	5715407	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	3	5747587	5747588	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	5754054	5754055	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5787756	5787757	1	C	core_nonrep	17	1	1
Rue3-1-31	3	5790647	5790648	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	5790648	5790649	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	5792280	5792281	1	T	core_nonrep	10	0.777778	1
Rue3-1-31	3	5794929	5794930	1	A	nonrep	5	0.714286	1
Rue3-1-31	3	5794933	5794934	2	TG	core_nonrep	5	0.833333	1
Rue3-1-31	3	5800047	5800048	1	T	core_nonrep	3	1	1
Rue3-1-31	3	5820726	5820727	2	CG	core_nonrep	7	0.833333	1
Rue3-1-31	3	5830322	5830323	1	A	core_nonrep	7	1	1
Rue3-1-31	3	5844288	5844289	1	G	core_nonrep	3	1	1
Rue3-1-31	3	5848481	5848482	3	CTT	core_nonrep	3	1	1
Rue3-1-31	3	5849739	5849740	1	T	core_nonrep	4	1	1
Rue3-1-31	3	5850315	5850316	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	5856512	5856513	1	A	core_nonrep	4	1	1
Rue3-1-31	3	5886972	5886973	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	3	5887920	5887921	1	A	core_nonrep	6	1	1
Rue3-1-31	3	5887955	5887956	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	5888100	5888101	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	3	5888263	5888264	2	AT	core_nonrep	4	1	1
Rue3-1-31	3	5902295	5902296	1	G	core_nonrep	7	1	1
Rue3-1-31	3	5923824	5923825	1	G	core_nonrep	12	1	1
Rue3-1-31	3	5932493	5932494	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	5932494	5932495	2	AC	core_nonrep	4	1	1
Rue3-1-31	3	5963085	5963086	1	G	core_nonrep	5	1	1
Rue3-1-31	3	5986283	5986284	1	A	core_nonrep	6	1	1
Rue3-1-31	3	5995708	5995709	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	6003917	6003918	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	6004655	6004656	1	T	core_nonrep	8	1	1
Rue3-1-31	3	6004772	6004773	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6006574	6006575	1	T	core_nonrep	3	1	1
Rue3-1-31	3	6012686	6012687	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6013426	6013427	1	G	nonrep	5	1	1
Rue3-1-31	3	6035551	6035552	1	C	core_nonrep	7	1	1
Rue3-1-31	3	6039113	6039114	1	T	core_nonrep	7	0.8	1
Rue3-1-31	3	6045308	6045309	1	C	core_nonrep	6	1	1
Rue3-1-31	3	6048818	6048819	1	A	core_nonrep	9	1	1
Rue3-1-31	3	6049873	6049874	1	C	core_nonrep	6	1	1
Rue3-1-31	3	6089524	6089525	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6097397	6097398	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	6104743	6104744	1	C	nonrep	3	1	1
Rue3-1-31	3	6108574	6108575	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6115203	6115204	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6116459	6116460	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	6116460	6116461	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	3	6116559	6116560	1	C	core_nonrep	5	1	1
Rue3-1-31	3	6119860	6119861	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	3	6120399	6120400	1	G	core_nonrep	4	1	1
Rue3-1-31	3	6120889	6120890	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	6121559	6121560	1	T	core_nonrep	14	1	1
Rue3-1-31	3	6122039	6122040	2	TT	core_nonrep	16	0.882353	1
Rue3-1-31	3	6122040	6122041	1	A	core_nonrep	15	0.833333	1
Rue3-1-31	3	6122695	6122696	2	AA	core_nonrep	17	1	1
Rue3-1-31	3	6124320	6124321	1	T	core_nonrep	12	1	1
Rue3-1-31	3	6134924	6134925	1	G	core_nonrep	5	1	1
Rue3-1-31	3	6139014	6139015	1	T	core_nonrep	5	1	1
Rue3-1-31	3	6140540	6140541	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	3	6145607	6145608	1	G	core_nonrep	5	1	1
Rue3-1-31	3	6145624	6145625	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6145669	6145670	1	T	nonrep	3	0.75	1
Rue3-1-31	3	6147607	6147608	1	T	core_nonrep	11	1	1
Rue3-1-31	3	6154075	6154076	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	3	6155683	6155684	1	T	core_nonrep	10	1	1
Rue3-1-31	3	6159768	6159769	1	T	core_nonrep	5	1	1
Rue3-1-31	3	6164206	6164207	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6164207	6164208	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6164568	6164569	1	T	core_nonrep	6	0.8	1
Rue3-1-31	3	6171296	6171297	1	A	nonrep	3	0.75	1
Rue3-1-31	3	6173282	6173283	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	6173284	6173285	1	C	core_nonrep	5	1	1
Rue3-1-31	3	6179301	6179302	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6186998	6186999	1	T	core_nonrep	8	1	1
Rue3-1-31	3	6195336	6195337	1	T	core_nonrep	16	1	1
Rue3-1-31	3	6211111	6211112	1	A	core_nonrep	9	1	1
Rue3-1-31	3	6217484	6217485	1	C	core_nonrep	17	0.8	1
Rue3-1-31	3	6218961	6218962	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6219211	6219212	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	6219217	6219218	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	3	6226192	6226193	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6226193	6226194	2	GT	core_nonrep	7	1	1
Rue3-1-31	3	6234357	6234358	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6243129	6243130	1	G	nonrep	3	1	1
Rue3-1-31	3	6243681	6243682	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6247200	6247201	2	CA	core_nonrep	7	0.875	1
Rue3-1-31	3	6249279	6249280	1	A	core_nonrep	24	0.875	1
Rue3-1-31	3	6260972	6260973	1	G	core_nonrep	9	1	1
Rue3-1-31	3	6272348	6272349	1	A	nonrep	5	0.714286	1
Rue3-1-31	3	6278483	6278484	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	6280896	6280897	1	A	nonrep	3	1	1
Rue3-1-31	3	6290952	6290953	1	T	core_nonrep	5	1	1
Rue3-1-31	3	6304349	6304350	1	A	core_nonrep	14	1	1
Rue3-1-31	3	6305508	6305509	1	A	nonrep	3	0.75	1
Rue3-1-31	3	6323028	6323029	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6345827	6345828	1	T	core_nonrep	5	1	1
Rue3-1-31	3	6346579	6346580	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	6347058	6347059	1	C	core_nonrep	4	1	1
Rue3-1-31	3	6347131	6347132	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6347135	6347136	1	A	core_nonrep	4	1	1
Rue3-1-31	3	6347826	6347827	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	6348906	6348907	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6353224	6353225	1	T	core_nonrep	7	1	1
Rue3-1-31	3	6355575	6355576	1	G	core_nonrep	5	1	1
Rue3-1-31	3	6357424	6357425	2	CC	core_nonrep	14	0.923077	1
Rue3-1-31	3	6360982	6360983	1	G	core_nonrep	5	1	1
Rue3-1-31	3	6361166	6361167	1	A	core_nonrep	10	1	1
Rue3-1-31	3	6367233	6367234	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6378682	6378683	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	6383549	6383550	1	A	core_nonrep	4	1	1
Rue3-1-31	3	6384501	6384502	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	6388447	6388448	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6388449	6388450	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6390283	6390284	3	CAA	core_nonrep	5	0.833333	1
Rue3-1-31	3	6390630	6390631	1	A	core_nonrep	5	1	1
Rue3-1-31	3	6390719	6390720	1	A	core_nonrep	5	1	1
Rue3-1-31	3	6397243	6397244	2	CA	core_nonrep	12	0.909091	1
Rue3-1-31	3	6398418	6398419	1	A	core_nonrep	13	1	1
Rue3-1-31	3	6401123	6401124	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6401790	6401791	1	G	core_nonrep	14	1	1
Rue3-1-31	3	6403357	6403358	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	6404879	6404880	1	A	core_nonrep	14	1	1
Rue3-1-31	3	6406482	6406483	1	T	core_nonrep	9	1	1
Rue3-1-31	3	6407748	6407749	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	3	6413396	6413397	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	6416323	6416324	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6418084	6418085	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	3	6419172	6419173	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	6419781	6419782	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	6427057	6427058	1	A	nonrep	3	1	1
Rue3-1-31	3	6435490	6435491	1	A	core_nonrep	9	0.875	1
Rue3-1-31	3	6443891	6443892	2	AA	core_nonrep	11	1	1
Rue3-1-31	3	6448743	6448744	1	C	core_nonrep	6	1	1
Rue3-1-31	3	6473480	6473481	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6477582	6477583	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	3	6477743	6477744	1	A	core_nonrep	10	1	1
Rue3-1-31	3	6484450	6484451	1	C	core_nonrep	5	1	1
Rue3-1-31	3	6488219	6488220	2	AT	core_nonrep	7	1	1
Rue3-1-31	3	6490330	6490331	1	C	core_nonrep	9	1	1
Rue3-1-31	3	6496170	6496171	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	3	6503326	6503327	1	T	core_nonrep	9	1	1
Rue3-1-31	3	6506833	6506834	1	A	core_nonrep	14	1	1
Rue3-1-31	3	6507571	6507572	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6507960	6507961	1	T	core_nonrep	9	1	1
Rue3-1-31	3	6508156	6508157	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6509466	6509467	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	6510430	6510431	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6510550	6510551	1	T	core_nonrep	8	1	1
Rue3-1-31	3	6517579	6517580	1	T	core_nonrep	7	1	1
Rue3-1-31	3	6529801	6529802	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6551760	6551761	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6555361	6555362	2	GA	core_nonrep	6	0.8	1
Rue3-1-31	3	6563291	6563292	1	T	core_nonrep	7	1	1
Rue3-1-31	3	6563384	6563385	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	6564376	6564377	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	3	6565205	6565206	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	6581815	6581816	1	G	core_nonrep	7	1	1
Rue3-1-31	3	6582460	6582461	1	T	core_nonrep	12	0.857143	1
Rue3-1-31	3	6590545	6590546	1	G	core_nonrep	4	1	1
Rue3-1-31	3	6591595	6591596	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6595767	6595768	1	G	core_nonrep	7	1	1
Rue3-1-31	3	6597609	6597610	2	TG	core_nonrep	7	1	1
Rue3-1-31	3	6599147	6599148	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6616136	6616137	1	G	core_nonrep	4	1	1
Rue3-1-31	3	6621377	6621378	1	C	core_nonrep	4	1	1
Rue3-1-31	3	6621638	6621639	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	3	6622720	6622721	1	G	core_nonrep	11	1	1
Rue3-1-31	3	6625113	6625114	1	T	core_nonrep	5	1	1
Rue3-1-31	3	6625500	6625501	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6630789	6630790	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	3	6632444	6632445	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6637419	6637420	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	6650869	6650870	1	A	core_nonrep	4	1	1
Rue3-1-31	3	6651807	6651808	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6652492	6652493	1	G	core_nonrep	9	1	1
Rue3-1-31	3	6668072	6668073	1	C	core_nonrep	9	1	1
Rue3-1-31	3	6671344	6671345	1	G	core_nonrep	8	1	1
Rue3-1-31	3	6676200	6676201	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	6686987	6686988	1	T	core_nonrep	9	1	1
Rue3-1-31	3	6687102	6687103	1	A	core_nonrep	10	1	1
Rue3-1-31	3	6693846	6693847	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	6693847	6693848	2	AG	core_nonrep	7	0.875	1
Rue3-1-31	3	6699084	6699085	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	6716891	6716892	1	G	core_nonrep	4	1	1
Rue3-1-31	3	6720512	6720513	2	AT	core_nonrep	3	1	1
Rue3-1-31	3	6721631	6721632	1	A	core_nonrep	4	1	1
Rue3-1-31	3	6722224	6722225	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6723014	6723015	1	A	core_nonrep	10	0.9	1
Rue3-1-31	3	6727817	6727818	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6731129	6731130	1	T	core_nonrep	7	1	1
Rue3-1-31	3	6740520	6740521	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	6742274	6742275	2	AG	core_nonrep	13	1	1
Rue3-1-31	3	6743603	6743604	1	A	core_nonrep	4	1	1
Rue3-1-31	3	6744828	6744829	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	6754647	6754648	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6755997	6755998	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6760109	6760110	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	6771092	6771093	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6771307	6771308	1	A	core	3	1	1.33333
Rue3-1-31	3	6777243	6777244	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	6777642	6777643	1	C	core_nonrep	7	1	1
Rue3-1-31	3	6779792	6779793	2	AT	core_nonrep	7	0.857143	1
Rue3-1-31	3	6779875	6779876	1	A	core_nonrep	5	1	1
Rue3-1-31	3	6779928	6779929	2	CG	core_nonrep	5	1	1
Rue3-1-31	3	6787152	6787153	1	T	core_nonrep	6	1	1
Rue3-1-31	3	6788201	6788202	1	G	core_nonrep	3	1	1
Rue3-1-31	3	6790311	6790312	1	A	core_nonrep	9	1	1
Rue3-1-31	3	6793275	6793276	1	A	core_nonrep	10	1	1
Rue3-1-31	3	6793413	6793414	1	A	core_nonrep	7	1	1
Rue3-1-31	3	6795014	6795015	1	T	core_nonrep	4	1	1
Rue3-1-31	3	6795619	6795620	1	A	nonrep	3	1	1
Rue3-1-31	3	6800313	6800314	2	AT	core_nonrep	5	1	1
Rue3-1-31	3	6804803	6804804	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	6815605	6815606	1	G	core_nonrep	9	0.75	1
Rue3-1-31	3	6827736	6827737	1	C	core_nonrep	4	1	1
Rue3-1-31	3	6829694	6829695	1	A	core_nonrep	12	1	1
Rue3-1-31	3	6829884	6829885	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	3	6829887	6829888	1	C	core_nonrep	9	1	1
Rue3-1-31	3	6838222	6838223	1	A	nonrep	4	0.8	1
Rue3-1-31	3	6849313	6849314	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	6850580	6850581	2	AC	core_nonrep	8	1	1
Rue3-1-31	3	6856153	6856154	1	C	core_nonrep	12	1	1
Rue3-1-31	3	6857749	6857750	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	6866263	6866264	1	A	core_nonrep	12	1	1
Rue3-1-31	3	6883426	6883427	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6902129	6902130	1	A	nonrep	3	0.75	1
Rue3-1-31	3	6902130	6902131	1	T	nonrep	3	0.75	1
Rue3-1-31	3	6917209	6917210	1	A	core_nonrep	6	1	1
Rue3-1-31	3	6920426	6920427	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	3	6926244	6926245	2	GA	core_nonrep	3	1	1
Rue3-1-31	3	6940041	6940042	1	C	core_nonrep	8	1	1
Rue3-1-31	3	6940406	6940407	2	TC	core_nonrep	5	0.8	1
Rue3-1-31	3	6940540	6940541	1	T	nonrep	3	0.75	1
Rue3-1-31	3	6945277	6945278	1	A	core_nonrep	3	1	1
Rue3-1-31	3	6951226	6951227	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	3	6951227	6951228	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	3	7074958	7074959	1	A	core_nonrep	10	1	1
Rue3-1-31	3	7076511	7076512	1	C	core_nonrep	14	0.769231	1
Rue3-1-31	3	7079009	7079010	2	CG	core_nonrep	9	1	1
Rue3-1-31	3	7079122	7079123	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7079719	7079720	1	T	core_nonrep	7	1	1
Rue3-1-31	3	7079816	7079817	1	T	core_nonrep	12	1	1
Rue3-1-31	3	7079983	7079984	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	7081871	7081872	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	7083558	7083559	1	T	core_nonrep	5	1	1
Rue3-1-31	3	7084118	7084119	2	TT	core_nonrep	4	1	1
Rue3-1-31	3	7087618	7087619	1	A	core_nonrep	10	1	1
Rue3-1-31	3	7095183	7095184	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7108381	7108382	1	T	core_nonrep	7	1	1
Rue3-1-31	3	7108668	7108669	1	A	core_nonrep	14	0.888889	1
Rue3-1-31	3	7111866	7111867	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	7114096	7114097	1	A	core_nonrep	7	1	1
Rue3-1-31	3	7115382	7115383	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7122104	7122105	1	T	core_nonrep	11	1	1
Rue3-1-31	3	7122172	7122173	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	7122506	7122507	1	G	core_nonrep	13	0.928571	1
Rue3-1-31	3	7126150	7126151	1	T	core_nonrep	5	1	1
Rue3-1-31	3	7128715	7128716	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7136836	7136837	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7138752	7138753	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	7146932	7146933	1	T	core_nonrep	11	1	1
Rue3-1-31	3	7152384	7152385	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	3	7155908	7155909	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	7156626	7156627	1	T	core_nonrep	5	1	1
Rue3-1-31	3	7174316	7174317	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	7191676	7191677	1	A	core_nonrep	6	1	1
Rue3-1-31	3	7193806	7193807	1	T	nonrep	5	0.714286	1
Rue3-1-31	3	7194534	7194535	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	7202648	7202649	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7227423	7227424	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	7257952	7257953	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	7259788	7259789	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	3	7265584	7265585	3	AAC	core_nonrep	5	1	1
Rue3-1-31	3	7266101	7266102	1	A	core_nonrep	7	1	1
Rue3-1-31	3	7273715	7273716	1	A	core_nonrep	13	1	1
Rue3-1-31	3	7274563	7274564	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	7275331	7275332	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	7275370	7275371	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7286479	7286480	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7292566	7292567	2	AT	core_nonrep	3	1	1
Rue3-1-31	3	7294452	7294453	2	AT	core_nonrep	3	1	1
Rue3-1-31	3	7297028	7297029	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7302263	7302264	1	C	core_nonrep	7	1	1
Rue3-1-31	3	7304098	7304099	1	A	core_nonrep	7	1	1
Rue3-1-31	3	7306081	7306082	1	T	core_nonrep	13	1	1
Rue3-1-31	3	7306619	7306620	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7312969	7312970	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	7323257	7323258	1	A	core_nonrep	7	1	1
Rue3-1-31	3	7324412	7324413	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7343807	7343808	3	AAG	core_nonrep	11	1	1.06667
Rue3-1-31	3	7347841	7347842	2	CC	core_nonrep	8	0.833333	1
Rue3-1-31	3	7348565	7348566	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	3	7356412	7356413	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	3	7376468	7376469	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7411126	7411127	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7411323	7411324	1	A	core_nonrep	13	0.714286	1
Rue3-1-31	3	7431216	7431217	1	T	core_nonrep	9	1	1
Rue3-1-31	3	7445063	7445064	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	3	7445484	7445485	1	A	core_nonrep	7	1	1
Rue3-1-31	3	7445653	7445654	1	C	core_nonrep	7	1	1
Rue3-1-31	3	7445654	7445655	1	G	core_nonrep	5	0.8	1
Rue3-1-31	3	7450763	7450764	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	7455453	7455454	1	C	core_nonrep	9	0.833333	1
Rue3-1-31	3	7456265	7456266	1	A	core_nonrep	9	1	1
Rue3-1-31	3	7457495	7457496	1	T	core_nonrep	7	1	1
Rue3-1-31	3	7465837	7465838	1	G	core_nonrep	13	1	1
Rue3-1-31	3	7467348	7467349	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	7467643	7467644	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	7483783	7483784	1	T	core_nonrep	8	1	1
Rue3-1-31	3	7492543	7492544	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	7502078	7502079	2	GT	core_nonrep	13	0.923077	1
Rue3-1-31	3	7521361	7521362	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7525014	7525015	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7538416	7538417	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	7538417	7538418	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	7542291	7542292	1	A	core_nonrep	6	1	1
Rue3-1-31	3	7543474	7543475	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	7553109	7553110	1	A	core_nonrep	10	1	1
Rue3-1-31	3	7559393	7559394	1	A	core_nonrep	13	0.923077	1
Rue3-1-31	3	7573339	7573340	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7579882	7579883	1	G	core_nonrep	4	1	1
Rue3-1-31	3	7585964	7585965	1	A	core_nonrep	3	1	1
Rue3-1-31	3	7586488	7586489	1	T	core_nonrep	10	1	1
Rue3-1-31	3	7593307	7593308	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7599224	7599225	1	C	core_nonrep	5	1	1
Rue3-1-31	3	7614122	7614123	1	A	core_nonrep	8	0.8	1
Rue3-1-31	3	7618594	7618595	2	CG	core_nonrep	6	1	1
Rue3-1-31	3	7619420	7619421	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	3	7620992	7620993	1	A	core_nonrep	3	1	1
Rue3-1-31	3	7621423	7621424	1	T	core_nonrep	10	1	1
Rue3-1-31	3	7623798	7623799	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	7631182	7631183	1	C	core_nonrep	4	1	1
Rue3-1-31	3	7632898	7632899	1	G	core_nonrep	4	1	1
Rue3-1-31	3	7632994	7632995	1	G	nonrep	3	0.75	1
Rue3-1-31	3	7633001	7633002	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7639967	7639968	2	TC	core_nonrep	5	0.833333	1
Rue3-1-31	3	7640131	7640132	1	T	nonrep	5	1	1
Rue3-1-31	3	7644516	7644517	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7655775	7655776	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7658229	7658230	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7658233	7658234	1	G	core_nonrep	3	1	1
Rue3-1-31	3	7669389	7669390	2	GA	core_nonrep	4	0.75	1
Rue3-1-31	3	7670465	7670466	2	TA	core_nonrep	4	0.8	1
Rue3-1-31	3	7670602	7670603	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7670804	7670805	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	3	7676756	7676757	1	A	core_nonrep	3	1	1
Rue3-1-31	3	7684833	7684834	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	3	7692813	7692814	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	7692982	7692983	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7693973	7693974	1	T	core_nonrep	8	1	1
Rue3-1-31	3	7699720	7699721	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7706316	7706317	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7710236	7710237	1	T	core_nonrep	7	1	1
Rue3-1-31	3	7711700	7711701	1	A	nonrep	3	0.75	1
Rue3-1-31	3	7715079	7715080	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	7715080	7715081	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	7715081	7715082	1	C	core_nonrep	3	1	1
Rue3-1-31	3	7725087	7725088	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7727175	7727176	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7741431	7741432	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	7774782	7774783	1	A	nonrep	3	1	1
Rue3-1-31	3	7785618	7785619	1	T	core_nonrep	5	1	1
Rue3-1-31	3	7786641	7786642	1	A	core_nonrep	6	1	1
Rue3-1-31	3	7787767	7787768	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	7787768	7787769	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	7789311	7789312	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7789404	7789405	1	T	core_nonrep	5	1	1
Rue3-1-31	3	7797652	7797653	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	7826321	7826322	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7830915	7830916	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7834636	7834637	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	3	7866206	7866207	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7870587	7870588	1	T	nonrep	4	1	1
Rue3-1-31	3	7874668	7874669	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	7878766	7878767	2	GT	core_nonrep	5	0.833333	1
Rue3-1-31	3	7878767	7878768	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	7885148	7885149	1	A	core_nonrep	10	1	1
Rue3-1-31	3	7888591	7888592	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7890097	7890098	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7890637	7890638	1	T	core_nonrep	9	0.9	1
Rue3-1-31	3	7890709	7890710	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7891039	7891040	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	3	7892189	7892190	1	A	core_nonrep	5	1	1
Rue3-1-31	3	7893117	7893118	1	A	core_nonrep	10	1	1
Rue3-1-31	3	7896256	7896257	2	AA	core_nonrep	14	1	1
Rue3-1-31	3	7899156	7899157	1	C	core_nonrep	4	1	1
Rue3-1-31	3	7901569	7901570	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7903819	7903820	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	7909969	7909970	1	A	core_nonrep	13	1	1
Rue3-1-31	3	7911859	7911860	1	A	core_nonrep	3	1	1
Rue3-1-31	3	7936260	7936261	1	A	core_nonrep	8	1	1
Rue3-1-31	3	7936287	7936288	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	3	7938255	7938256	1	G	core_nonrep	4	1	1
Rue3-1-31	3	7938920	7938921	1	C	core_nonrep	3	1	1
Rue3-1-31	3	7939238	7939239	1	A	core_nonrep	3	1	1
Rue3-1-31	3	7940271	7940272	1	G	core_nonrep	4	1	1
Rue3-1-31	3	7940953	7940954	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7940954	7940955	1	A	core_nonrep	4	1	1
Rue3-1-31	3	7943695	7943696	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7986341	7986342	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	7997362	7997363	1	T	core_nonrep	6	1	1
Rue3-1-31	3	7998593	7998594	1	T	core_nonrep	4	1	1
Rue3-1-31	3	7998595	7998596	1	T	core_nonrep	3	1	1
Rue3-1-31	3	7998648	7998649	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8000775	8000776	1	G	core_nonrep	6	1	1
Rue3-1-31	3	8000776	8000777	1	A	core_nonrep	6	1	1
Rue3-1-31	3	8002487	8002488	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8014603	8014604	1	T	core_nonrep	5	1	1
Rue3-1-31	3	8026756	8026757	2	CG	core_nonrep	5	1	1
Rue3-1-31	3	8028924	8028925	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8033395	8033396	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	8041531	8041532	2	AG	core_nonrep	7	0.857143	1
Rue3-1-31	3	8058704	8058705	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	8067367	8067368	1	T	nonrep	3	1	1
Rue3-1-31	3	8071785	8071786	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8086127	8086128	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	3	8087074	8087075	1	C	nonrep	5	1	1
Rue3-1-31	3	8089792	8089793	1	A	core_nonrep	9	0.9	1
Rue3-1-31	3	8089793	8089794	1	G	core_nonrep	10	1	1
Rue3-1-31	3	8091464	8091465	1	G	core_nonrep	10	1	1
Rue3-1-31	3	8093515	8093516	1	C	core_nonrep	3	1	1
Rue3-1-31	3	8103703	8103704	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	8104016	8104017	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	8109884	8109885	1	A	core_nonrep	5	1	1
Rue3-1-31	3	8110143	8110144	2	TA	core_nonrep	8	1	1
Rue3-1-31	3	8115152	8115153	1	C	core_nonrep	8	1	1
Rue3-1-31	3	8119538	8119539	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	8125132	8125133	1	A	core_nonrep	8	1	1
Rue3-1-31	3	8133147	8133148	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	8136937	8136938	1	A	core_nonrep	15	1	1
Rue3-1-31	3	8142326	8142327	1	T	core_nonrep	11	1	1
Rue3-1-31	3	8144851	8144852	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	8147643	8147644	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8149441	8149442	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8149442	8149443	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8149443	8149444	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	8150070	8150071	1	T	core_nonrep	5	0.833333	1.375
Rue3-1-31	3	8188232	8188233	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	8311158	8311159	1	C	core_nonrep	6	1	1
Rue3-1-31	3	8343946	8343947	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	8368812	8368813	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	8371312	8371313	1	C	nonrep	3	0.75	1
Rue3-1-31	3	8391658	8391659	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8391659	8391660	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8391662	8391663	1	G	core_nonrep	3	1	1
Rue3-1-31	3	8392906	8392907	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8394204	8394205	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8400414	8400415	1	A	core_nonrep	3	1	1
Rue3-1-31	3	8404211	8404212	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8404349	8404350	1	T	core_nonrep	12	1	1.2
Rue3-1-31	3	8417373	8417374	1	A	core_nonrep	13	1	1
Rue3-1-31	3	8422427	8422428	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	3	8425342	8425343	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8425744	8425745	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	3	8433466	8433467	1	T	core_nonrep	4	1	1.2
Rue3-1-31	3	8435407	8435408	1	G	core_nonrep	4	1	1
Rue3-1-31	3	8437752	8437753	1	A	core_nonrep	8	1	1
Rue3-1-31	3	8445684	8445685	2	GC	core_nonrep	16	1	1
Rue3-1-31	3	8447609	8447610	1	G	core_nonrep	8	1	1
Rue3-1-31	3	8451454	8451455	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	8452256	8452257	1	G	core_nonrep	16	1	1
Rue3-1-31	3	8457370	8457371	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	8458650	8458651	1	T	core_nonrep	14	1	1
Rue3-1-31	3	8458704	8458705	1	G	core_nonrep	12	0.923077	1
Rue3-1-31	3	8466724	8466725	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	3	8488459	8488460	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8496945	8496946	1	A	core_nonrep	5	1	1
Rue3-1-31	3	8509160	8509161	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	8526980	8526981	1	A	core_nonrep	7	1	1
Rue3-1-31	3	8527007	8527008	1	C	core_nonrep	6	1	1
Rue3-1-31	3	8528045	8528046	1	T	core_nonrep	14	0.875	1
Rue3-1-31	3	8529596	8529597	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	8544786	8544787	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8545876	8545877	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8548012	8548013	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	8549335	8549336	1	C	core_nonrep	5	1	1
Rue3-1-31	3	8549378	8549379	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	8549615	8549616	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8550832	8550833	1	C	core_nonrep	5	1	1
Rue3-1-31	3	8555596	8555597	1	G	core_nonrep	5	0.8	1
Rue3-1-31	3	8561570	8561571	1	G	core_nonrep	10	1	1
Rue3-1-31	3	8561825	8561826	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8584565	8584566	1	C	core_nonrep	7	1	1
Rue3-1-31	3	8597140	8597141	1	C	core_nonrep	5	0.8	1
Rue3-1-31	3	8605648	8605649	1	T	core_nonrep	7	1	1
Rue3-1-31	3	8610898	8610899	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	8612955	8612956	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8613480	8613481	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8618450	8618451	1	A	core_nonrep	7	1	1
Rue3-1-31	3	8630398	8630399	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	8640469	8640470	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	3	8645488	8645489	1	T	core_nonrep	7	0.875	1.33333
Rue3-1-31	3	8645556	8645557	1	T	core_nonrep	7	1	1
Rue3-1-31	3	8645698	8645699	2	GT	core_nonrep	7	0.777778	1
Rue3-1-31	3	8651474	8651475	1	T	core_nonrep	5	1	1
Rue3-1-31	3	8686442	8686443	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	8686516	8686517	1	G	core_nonrep	4	1	1
Rue3-1-31	3	8689311	8689312	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8693464	8693465	1	C	core_nonrep	23	0.956522	1
Rue3-1-31	3	8701343	8701344	1	C	core_nonrep	8	1	1
Rue3-1-31	3	8704559	8704560	1	A	core_nonrep	6	1	1
Rue3-1-31	3	8708931	8708932	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8711060	8711061	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8729048	8729049	1	A	core_nonrep	11	1	1
Rue3-1-31	3	8751466	8751467	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8752913	8752914	1	A	core_nonrep	6	0.833333	1.66667
Rue3-1-31	3	8756311	8756312	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	8758707	8758708	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8759302	8759303	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8764169	8764170	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	8803597	8803598	1	A	core_nonrep	3	1	1
Rue3-1-31	3	8819060	8819061	1	T	core_nonrep	10	1	1
Rue3-1-31	3	8830336	8830337	1	A	core_nonrep	8	1	1
Rue3-1-31	3	8838090	8838091	1	T	core_nonrep	9	1	1
Rue3-1-31	3	8842943	8842944	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	3	8858361	8858362	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	8859589	8859590	1	T	core_nonrep	10	1	1
Rue3-1-31	3	8859750	8859751	2	TA	core_nonrep	6	1	1
Rue3-1-31	3	8860851	8860852	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8860852	8860853	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8862770	8862771	1	A	core_nonrep	6	1	1
Rue3-1-31	3	8862941	8862942	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	8863660	8863661	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8880294	8880295	3	AAG	core_nonrep	9	0.7	1
Rue3-1-31	3	8885542	8885543	1	C	core_nonrep	3	1	1
Rue3-1-31	3	8887183	8887184	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8888946	8888947	1	T	core_nonrep	7	1	1
Rue3-1-31	3	8900251	8900252	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	8902686	8902687	1	G	core_nonrep	4	1	1
Rue3-1-31	3	8904743	8904744	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8905393	8905394	1	G	core_nonrep	6	1	1
Rue3-1-31	3	8909320	8909321	1	A	nonrep	3	0.75	1
Rue3-1-31	3	8909774	8909775	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8921830	8921831	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	8921924	8921925	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8922221	8922222	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	3	8923053	8923054	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	3	8923528	8923529	1	A	core_nonrep	5	1	1
Rue3-1-31	3	8926435	8926436	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8926936	8926937	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8929007	8929008	1	T	core_nonrep	6	1	1
Rue3-1-31	3	8930336	8930337	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8930341	8930342	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	8931529	8931530	1	A	core_nonrep	4	1	1
Rue3-1-31	3	8931833	8931834	2	TG	core_nonrep	4	1	1
Rue3-1-31	3	8939645	8939646	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	3	8942888	8942889	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8945151	8945152	2	TT	core_nonrep	11	1	1
Rue3-1-31	3	8947452	8947453	1	T	core_nonrep	16	0.857143	1
Rue3-1-31	3	8949068	8949069	1	T	core_nonrep	13	0.846154	1
Rue3-1-31	3	8952804	8952805	1	A	core_nonrep	3	1	1
Rue3-1-31	3	8964127	8964128	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	8968127	8968128	1	A	core_nonrep	9	1	1
Rue3-1-31	3	8968285	8968286	1	A	core_nonrep	20	1	1
Rue3-1-31	3	8969163	8969164	1	A	core_nonrep	11	1	1
Rue3-1-31	3	8971292	8971293	1	G	core_nonrep	8	1	1
Rue3-1-31	3	8973551	8973552	1	T	core_nonrep	4	1	1
Rue3-1-31	3	8974179	8974180	1	T	core_nonrep	3	1	1
Rue3-1-31	3	8981941	8981942	1	T	core_nonrep	10	0.9	1
Rue3-1-31	3	8983198	8983199	1	A	core_nonrep	7	1	1
Rue3-1-31	3	8983199	8983200	1	C	core_nonrep	7	1	1
Rue3-1-31	3	8983761	8983762	1	A	core_nonrep	9	1	1
Rue3-1-31	3	8983872	8983873	1	A	core_nonrep	9	1	1
Rue3-1-31	3	8996933	8996934	2	TA	core_nonrep	5	1	1
Rue3-1-31	3	9000227	9000228	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	9001541	9001542	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	9006684	9006685	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	3	9018316	9018317	1	T	core_nonrep	9	1	1
Rue3-1-31	3	9019657	9019658	1	T	core_nonrep	3	1	1
Rue3-1-31	3	9020140	9020141	1	C	core_nonrep	4	1	1
Rue3-1-31	3	9021599	9021600	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	9021804	9021805	1	T	core_nonrep	3	1	1
Rue3-1-31	3	9035425	9035426	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9043392	9043393	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9043393	9043394	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9043478	9043479	1	A	core_nonrep	3	1	1
Rue3-1-31	3	9052934	9052935	1	A	core_nonrep	11	1	1
Rue3-1-31	3	9053394	9053395	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9053403	9053404	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	9054603	9054604	2	TT	nonrep	4	0.8	1
Rue3-1-31	3	9054988	9054989	1	C	core_nonrep	7	1	1.14286
Rue3-1-31	3	9063594	9063595	1	A	core_nonrep	8	1	1
Rue3-1-31	3	9064433	9064434	1	C	core_nonrep	8	1	1
Rue3-1-31	3	9066964	9066965	2	TT	core_nonrep	4	1	1
Rue3-1-31	3	9067105	9067106	1	G	nonrep	3	0.75	1
Rue3-1-31	3	9073101	9073102	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	9098496	9098497	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9113655	9113656	1	C	core_nonrep	3	1	1
Rue3-1-31	3	9123641	9123642	1	G	core_nonrep	5	1	1
Rue3-1-31	3	9130625	9130626	1	T	core_nonrep	3	1	1
Rue3-1-31	3	9131194	9131195	1	A	core_nonrep	3	1	1
Rue3-1-31	3	9131878	9131879	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9133401	9133402	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9133995	9133996	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9135042	9135043	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9135489	9135490	1	C	core_nonrep	4	1	1
Rue3-1-31	3	9136589	9136590	2	GG	core_nonrep	8	0.833333	1
Rue3-1-31	3	9137237	9137238	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9143261	9143262	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9146143	9146144	1	C	core_nonrep	8	1	1
Rue3-1-31	3	9149721	9149722	2	AA	core_nonrep	11	1	1
Rue3-1-31	3	9151369	9151370	2	GT	core_nonrep	8	0.857143	1
Rue3-1-31	3	9151405	9151406	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	9151664	9151665	1	C	core_nonrep	6	1	1
Rue3-1-31	3	9152092	9152093	1	C	core_nonrep	8	1	1
Rue3-1-31	3	9152117	9152118	1	A	core_nonrep	7	1	1
Rue3-1-31	3	9163292	9163293	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	9163971	9163972	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	9165605	9165606	1	C	core_nonrep	5	1	1
Rue3-1-31	3	9173859	9173860	1	T	nonrep	4	1	1
Rue3-1-31	3	9177146	9177147	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9178198	9178199	1	C	core_nonrep	8	1	1
Rue3-1-31	3	9178364	9178365	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	9185155	9185156	1	T	core_nonrep	15	0.823529	1
Rue3-1-31	3	9189320	9189321	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	9207862	9207863	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9209287	9209288	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9212700	9212701	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9212777	9212778	2	TT	core_nonrep	4	1	1
Rue3-1-31	3	9212778	9212779	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9213760	9213761	2	TT	core_nonrep	8	0.8	1
Rue3-1-31	3	9213776	9213777	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	9214446	9214447	1	C	core_nonrep	9	1	1
Rue3-1-31	3	9214640	9214641	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	9215064	9215065	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9221044	9221045	1	A	core_nonrep	7	1	1
Rue3-1-31	3	9222789	9222790	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9242944	9242945	1	A	core_nonrep	5	1	1
Rue3-1-31	3	9243135	9243136	1	C	core_nonrep	12	0.769231	1
Rue3-1-31	3	9274596	9274597	1	C	core_nonrep	4	0.75	1
Rue3-1-31	3	9278146	9278147	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	9280879	9280880	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	9293863	9293864	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	9295464	9295465	1	A	core_nonrep	9	1	1
Rue3-1-31	3	9299770	9299771	1	T	core_nonrep	6	0.8	1
Rue3-1-31	3	9301514	9301515	1	A	core_nonrep	8	1	1
Rue3-1-31	3	9306754	9306755	1	T	nonrep	3	1	1
Rue3-1-31	3	9308004	9308005	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9309164	9309165	1	T	core_nonrep	9	1	1
Rue3-1-31	3	9311470	9311471	1	T	core_nonrep	11	1	1
Rue3-1-31	3	9314604	9314605	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9327777	9327778	1	C	core_nonrep	4	1	1
Rue3-1-31	3	9330110	9330111	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	9330403	9330404	1	G	core_nonrep	6	1	1
Rue3-1-31	3	9330417	9330418	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9333376	9333377	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9340866	9340867	1	G	core_nonrep	13	0.916667	1
Rue3-1-31	3	9341015	9341016	1	A	core_nonrep	10	1	1
Rue3-1-31	3	9420508	9420509	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	9474151	9474152	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9479679	9479680	1	G	core_nonrep	5	1	1
Rue3-1-31	3	9483752	9483753	1	T	core_nonrep	18	0.842105	1
Rue3-1-31	3	9485882	9485883	1	A	nonrep	6	0.75	1
Rue3-1-31	3	9488403	9488404	1	G	core_nonrep	9	1	1
Rue3-1-31	3	9494381	9494382	1	T	nonrep	6	0.75	1
Rue3-1-31	3	9494870	9494871	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	9496266	9496267	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9497076	9497077	1	T	core_nonrep	9	1	1
Rue3-1-31	3	9507190	9507191	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9511072	9511073	1	T	core_nonrep	6	1	1
Rue3-1-31	3	9515729	9515730	3	ATA	core_nonrep	6	0.75	1
Rue3-1-31	3	9526432	9526433	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	9537120	9537121	1	A	core_nonrep	3	1	1
Rue3-1-31	3	9538684	9538685	1	T	core_nonrep	6	1	1
Rue3-1-31	3	9551752	9551753	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	9552110	9552111	1	A	core_nonrep	5	1	1
Rue3-1-31	3	9578147	9578148	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9587752	9587753	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9588223	9588224	1	C	core_nonrep	6	1	1
Rue3-1-31	3	9589493	9589494	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9590358	9590359	1	C	nonrep	7	0.777778	1
Rue3-1-31	3	9590493	9590494	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9601492	9601493	1	T	core_nonrep	3	1	1
Rue3-1-31	3	9627827	9627828	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9630533	9630534	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9632225	9632226	1	C	core_nonrep	5	1	1
Rue3-1-31	3	9633802	9633803	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9637865	9637866	2	TT	core_nonrep	7	0.777778	1
Rue3-1-31	3	9638567	9638568	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9639268	9639269	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9647881	9647882	1	T	nonrep	4	0.8	1
Rue3-1-31	3	9651647	9651648	1	A	core_nonrep	14	1	1
Rue3-1-31	3	9657085	9657086	1	T	core_nonrep	17	1	1
Rue3-1-31	3	9657086	9657087	1	A	core_nonrep	17	1	1
Rue3-1-31	3	9657087	9657088	1	A	core_nonrep	17	1	1
Rue3-1-31	3	9666714	9666715	1	T	core_nonrep	3	1	1.6
Rue3-1-31	3	9666715	9666716	1	C	core_nonrep	3	1	1
Rue3-1-31	3	9674980	9674981	1	G	core_nonrep	9	1	1
Rue3-1-31	3	9683504	9683505	1	T	core_nonrep	4	1	1.16667
Rue3-1-31	3	9683908	9683909	1	A	core_nonrep	5	1	1
Rue3-1-31	3	9684552	9684553	1	C	core_nonrep	7	1	1
Rue3-1-31	3	9686499	9686500	1	C	core_nonrep	3	1	1
Rue3-1-31	3	9686652	9686653	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9699434	9699435	1	A	core_nonrep	5	1	1
Rue3-1-31	3	9708727	9708728	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	9711354	9711355	2	TG	core_nonrep	10	0.777778	1
Rue3-1-31	3	9717001	9717002	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9723754	9723755	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	9723755	9723756	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	9725120	9725121	1	T	core_nonrep	3	1	1.25
Rue3-1-31	3	9748200	9748201	1	A	core_nonrep	5	1	1
Rue3-1-31	3	9755264	9755265	1	G	core_nonrep	7	0.8	1
Rue3-1-31	3	9764110	9764111	1	C	core_nonrep	14	1	1
Rue3-1-31	3	9766589	9766590	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9769600	9769601	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9775071	9775072	1	G	nonrep	3	1	1
Rue3-1-31	3	9778578	9778579	1	A	core_nonrep	8	1	1
Rue3-1-31	3	9780035	9780036	1	A	nonrep	3	0.75	1
Rue3-1-31	3	9780958	9780959	1	T	nonrep	7	0.875	1
Rue3-1-31	3	9784651	9784652	1	C	core_nonrep	9	0.8	1
Rue3-1-31	3	9784974	9784975	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9795569	9795570	1	A	core_nonrep	7	1	1
Rue3-1-31	3	9798181	9798182	1	T	nonrep	4	0.8	1
Rue3-1-31	3	9806634	9806635	1	T	core_nonrep	9	1	1
Rue3-1-31	3	9808134	9808135	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	9832012	9832013	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9832013	9832014	2	CA	core_nonrep	4	1	1
Rue3-1-31	3	9833049	9833050	1	T	core_nonrep	4	1	1
Rue3-1-31	3	9837720	9837721	1	T	core_nonrep	3	1	1
Rue3-1-31	3	9837804	9837805	1	A	core_nonrep	3	1	1
Rue3-1-31	3	9838016	9838017	1	T	core_nonrep	5	1	1
Rue3-1-31	3	9840040	9840041	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9864990	9864991	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	9865799	9865800	1	C	core_nonrep	5	1	1
Rue3-1-31	3	9880579	9880580	1	T	core_nonrep	6	1	1
Rue3-1-31	3	9892376	9892377	1	A	core_nonrep	9	1	1
Rue3-1-31	3	9892892	9892893	1	G	core_nonrep	4	1	1
Rue3-1-31	3	9893573	9893574	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	3	9894042	9894043	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	9895697	9895698	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9907514	9907515	1	C	core_nonrep	3	1	1
Rue3-1-31	3	9913310	9913311	1	T	core_nonrep	6	1	1
Rue3-1-31	3	9913387	9913388	1	A	core_nonrep	6	1	1
Rue3-1-31	3	9913391	9913392	2	CG	core_nonrep	6	1	1
Rue3-1-31	3	9914417	9914418	1	A	core_nonrep	9	1	1
Rue3-1-31	3	9916417	9916418	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	9916821	9916822	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9918575	9918576	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	9922364	9922365	1	A	core_nonrep	3	1	1
Rue3-1-31	3	9929473	9929474	1	A	core_nonrep	7	1	1
Rue3-1-31	3	9929474	9929475	1	C	core_nonrep	7	1	1
Rue3-1-31	3	9929828	9929829	2	AT	core_nonrep	5	0.714286	1
Rue3-1-31	3	9929982	9929983	1	A	core_nonrep	4	1	1
Rue3-1-31	3	9930468	9930469	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9930917	9930918	2	AA	core_nonrep	7	1	1
Rue3-1-31	3	9931343	9931344	1	C	core_nonrep	8	1	1
Rue3-1-31	3	9931712	9931713	1	A	core_nonrep	17	1	1
Rue3-1-31	3	9939216	9939217	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	3	9953728	9953729	1	T	core_nonrep	7	1	1
Rue3-1-31	3	9954191	9954192	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	9954443	9954444	1	A	core_nonrep	7	1	1
Rue3-1-31	3	9954500	9954501	1	T	core_nonrep	8	1	1
Rue3-1-31	3	9954781	9954782	1	T	core_nonrep	6	1	1
Rue3-1-31	3	9954782	9954783	1	C	core_nonrep	6	1	1
Rue3-1-31	3	9954797	9954798	1	T	nonrep	5	0.714286	1
Rue3-1-31	3	9978314	9978315	2	TT	core_nonrep	5	0.833333	1.11111
Rue3-1-31	3	9983451	9983452	1	C	nonrep	3	0.75	1
Rue3-1-31	3	9995065	9995066	1	T	core_nonrep	21	1	1
Rue3-1-31	3	10012288	10012289	1	C	core_nonrep	8	0.714286	1
Rue3-1-31	3	10014776	10014777	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10019256	10019257	1	G	core_nonrep	4	1	1
Rue3-1-31	3	10031696	10031697	2	AT	core_nonrep	9	1	1
Rue3-1-31	3	10031769	10031770	1	A	core_nonrep	7	1	1
Rue3-1-31	3	10033099	10033100	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	10034683	10034684	1	T	core_nonrep	8	1	1
Rue3-1-31	3	10035014	10035015	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	10036226	10036227	2	TT	core_nonrep	9	0.8	1
Rue3-1-31	3	10038167	10038168	1	G	core_nonrep	3	0.75	1.5
Rue3-1-31	3	10049749	10049750	1	T	nonrep	3	0.75	1
Rue3-1-31	3	10051359	10051360	1	T	core_nonrep	3	1	1
Rue3-1-31	3	10061461	10061462	1	T	core_nonrep	4	1	1
Rue3-1-31	3	10061467	10061468	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	10061576	10061577	1	T	core_nonrep	5	1	1
Rue3-1-31	3	10064106	10064107	2	AT	core_nonrep	4	1	1
Rue3-1-31	3	10073676	10073677	1	T	core_nonrep	5	1	1
Rue3-1-31	3	10073814	10073815	1	T	core_nonrep	11	1	1
Rue3-1-31	3	10078022	10078023	2	GA	core_nonrep	5	0.8	1
Rue3-1-31	3	10084496	10084497	1	A	core_nonrep	11	0.785714	1
Rue3-1-31	3	10087323	10087324	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10115298	10115299	2	TG	core	3	1	1.33333
Rue3-1-31	3	10122292	10122293	1	C	core_nonrep	8	1	1
Rue3-1-31	3	10125130	10125131	1	C	nonrep	3	0.75	1
Rue3-1-31	3	10125476	10125477	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	10125477	10125478	1	G	core_nonrep	7	0.875	1
Rue3-1-31	3	10129690	10129691	1	G	core_nonrep	6	1	1
Rue3-1-31	3	10138262	10138263	1	C	nonrep	3	1	1
Rue3-1-31	3	10139065	10139066	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10144741	10144742	1	G	core_nonrep	15	1	1
Rue3-1-31	3	10144742	10144743	1	A	core_nonrep	16	1	1
Rue3-1-31	3	10147649	10147650	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10149491	10149492	1	G	nonrep	4	1	1
Rue3-1-31	3	10149904	10149905	1	T	core_nonrep	9	1	1
Rue3-1-31	3	10150936	10150937	1	A	core_nonrep	13	1	1
Rue3-1-31	3	10151349	10151350	1	A	core_nonrep	10	1	1
Rue3-1-31	3	10154592	10154593	1	C	nonrep	4	1	1
Rue3-1-31	3	10154640	10154641	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10156960	10156961	1	T	core_nonrep	12	1	1
Rue3-1-31	3	10158104	10158105	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	10158157	10158158	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	10163566	10163567	1	G	core_nonrep	8	1	1
Rue3-1-31	3	10163756	10163757	1	A	core_nonrep	4	1	1
Rue3-1-31	3	10164833	10164834	1	T	core_nonrep	9	1	1
Rue3-1-31	3	10165006	10165007	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10167268	10167269	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	10167412	10167413	1	C	core_nonrep	7	1	1
Rue3-1-31	3	10177606	10177607	1	G	core_nonrep	6	1	1
Rue3-1-31	3	10181668	10181669	1	T	core_nonrep	3	1	1
Rue3-1-31	3	10182340	10182341	1	A	nonrep	3	1	1
Rue3-1-31	3	10182704	10182705	1	T	core_nonrep	10	0.8	1
Rue3-1-31	3	10184218	10184219	1	G	core_nonrep	3	1	1
Rue3-1-31	3	10188172	10188173	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10193327	10193328	1	G	core_nonrep	7	1	1
Rue3-1-31	3	10197701	10197702	1	A	core_nonrep	6	1	1
Rue3-1-31	3	10198635	10198636	1	T	core_nonrep	5	1	1
Rue3-1-31	3	10198983	10198984	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	10204979	10204980	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	10206051	10206052	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10206258	10206259	1	A	core_nonrep	9	0.7	1
Rue3-1-31	3	10206307	10206308	1	A	core_nonrep	6	1	1
Rue3-1-31	3	10208946	10208947	1	G	core_nonrep	7	1	1
Rue3-1-31	3	10214318	10214319	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	10220749	10220750	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10221400	10221401	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10221438	10221439	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	10230231	10230232	1	A	core_nonrep	7	1	1
Rue3-1-31	3	10243018	10243019	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	10246455	10246456	1	A	core_nonrep	9	1	1
Rue3-1-31	3	10248544	10248545	1	C	core_nonrep	4	1	1
Rue3-1-31	3	10266985	10266986	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10268004	10268005	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	10274871	10274872	1	A	core_nonrep	6	1	1
Rue3-1-31	3	10300901	10300902	1	G	core_nonrep	6	1	1
Rue3-1-31	3	10306047	10306048	1	T	core_nonrep	4	1	1
Rue3-1-31	3	10306741	10306742	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	10308112	10308113	1	G	core_nonrep	3	1	1
Rue3-1-31	3	10334965	10334966	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	10340638	10340639	1	T	core_nonrep	5	1	1
Rue3-1-31	3	10351283	10351284	1	G	core_nonrep	3	1	1
Rue3-1-31	3	10351527	10351528	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10355061	10355062	1	G	core_nonrep	6	1	1
Rue3-1-31	3	10357187	10357188	1	T	core_nonrep	17	0.866667	1
Rue3-1-31	3	10659013	10659014	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	10668335	10668336	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	10686167	10686168	2	CT	core_nonrep	8	1	1
Rue3-1-31	3	10688509	10688510	2	AT	core_nonrep	9	1	1
Rue3-1-31	3	10691955	10691956	1	C	core	3	0.75	1.4
Rue3-1-31	3	10692015	10692016	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10692152	10692153	1	C	core_nonrep	4	1	1
Rue3-1-31	3	10692753	10692754	1	A	core_nonrep	10	1	1
Rue3-1-31	3	10694274	10694275	2	TA	core_nonrep	6	1	1
Rue3-1-31	3	10705824	10705825	2	GT	core_nonrep	5	1	1
Rue3-1-31	3	10710809	10710810	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10716142	10716143	1	T	core_nonrep	5	1	1
Rue3-1-31	3	10718953	10718954	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10720985	10720986	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10721704	10721705	2	AG	core_nonrep	10	0.9	1
Rue3-1-31	3	10725482	10725483	1	G	core_nonrep	6	1	1
Rue3-1-31	3	10728208	10728209	1	G	core_nonrep	10	1	1
Rue3-1-31	3	10735154	10735155	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	3	10735820	10735821	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10735877	10735878	1	A	nonrep	3	1	1
Rue3-1-31	3	10745040	10745041	1	C	core_nonrep	6	1	1
Rue3-1-31	3	10746139	10746140	1	T	core_nonrep	4	1	1
Rue3-1-31	3	10749022	10749023	1	T	core_nonrep	6	1	1.125
Rue3-1-31	3	10749042	10749043	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	10754032	10754033	1	T	core_nonrep	7	1	1
Rue3-1-31	3	10755417	10755418	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	10767737	10767738	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10773217	10773218	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	3	10780401	10780402	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	10791838	10791839	1	A	core_nonrep	9	1	1
Rue3-1-31	3	10794949	10794950	1	N	core_nonrep	3	0.75	1
Rue3-1-31	3	10804101	10804102	1	G	core_nonrep	12	0.923077	1
Rue3-1-31	3	10804488	10804489	2	AC	core_nonrep	5	1	1
Rue3-1-31	3	10826038	10826039	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	3	10826954	10826955	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10827607	10827608	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	3	10834978	10834979	1	C	nonrep	3	0.75	1
Rue3-1-31	3	10837922	10837923	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	10842481	10842482	1	A	core_nonrep	4	1	1
Rue3-1-31	3	10844827	10844828	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10845383	10845384	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	10846637	10846638	1	A	nonrep	3	1	1
Rue3-1-31	3	10847914	10847915	1	T	nonrep	3	0.75	1
Rue3-1-31	3	10848054	10848055	1	T	core_nonrep	3	1	1
Rue3-1-31	3	10863516	10863517	1	G	core_nonrep	4	1	1
Rue3-1-31	3	10868692	10868693	1	G	core_nonrep	6	0.8	1
Rue3-1-31	3	10870845	10870846	1	A	nonrep	3	0.75	1
Rue3-1-31	3	10878253	10878254	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10883783	10883784	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	10885117	10885118	1	C	core_nonrep	9	1	1
Rue3-1-31	3	10891362	10891363	1	T	nonrep	3	1	1
Rue3-1-31	3	10893437	10893438	1	A	core_nonrep	12	1	1
Rue3-1-31	3	10901252	10901253	2	AT	core_nonrep	3	1	1
Rue3-1-31	3	10904013	10904014	1	T	core_nonrep	10	1	1
Rue3-1-31	3	10904061	10904062	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	10904062	10904063	1	A	core_nonrep	5	1	1
Rue3-1-31	3	10905502	10905503	1	T	core_nonrep	12	1	1
Rue3-1-31	3	10906870	10906871	1	A	core_nonrep	3	1	1
Rue3-1-31	3	10906876	10906877	1	G	core_nonrep	3	1	1
Rue3-1-31	3	10907040	10907041	1	C	core_nonrep	3	1	1
Rue3-1-31	3	10909853	10909854	1	C	nonrep	6	1	1
Rue3-1-31	3	10917740	10917741	1	T	core_nonrep	3	1	1
Rue3-1-31	3	10917844	10917845	1	A	core_nonrep	4	1	1
Rue3-1-31	3	10925496	10925497	1	G	core_nonrep	15	0.916667	1
Rue3-1-31	3	10926774	10926775	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	3	10927892	10927893	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	3	10938376	10938377	2	TA	core_nonrep	7	1	1
Rue3-1-31	3	10942845	10942846	1	G	core_nonrep	4	1	1
Rue3-1-31	3	10945442	10945443	1	A	nonrep	3	1	1
Rue3-1-31	3	10952190	10952191	1	T	core_nonrep	8	1	1
Rue3-1-31	3	10952744	10952745	1	C	core_nonrep	5	1	1
Rue3-1-31	3	10954938	10954939	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	10955949	10955950	2	AC	core_nonrep	3	0.75	1
Rue3-1-31	3	10959641	10959642	1	T	core_nonrep	17	0.923077	1.05882
Rue3-1-31	3	10960290	10960291	2	GG	core_nonrep	4	1	1
Rue3-1-31	3	10960698	10960699	2	AT	core_nonrep	12	0.818182	1
Rue3-1-31	3	10964859	10964860	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	10980768	10980769	1	G	core	10	0.818182	1.15385
Rue3-1-31	3	10988976	10988977	1	A	core_nonrep	7	1	1
Rue3-1-31	3	10989131	10989132	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	3	10991144	10991145	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11011323	11011324	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	11014672	11014673	1	A	nonrep	3	0.75	1
Rue3-1-31	3	11014674	11014675	1	T	nonrep	3	1	1
Rue3-1-31	3	11017159	11017160	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	11026666	11026667	1	T	nonrep	9	0.9	1
Rue3-1-31	3	11041370	11041371	1	A	core_nonrep	12	0.785714	1
Rue3-1-31	3	11041879	11041880	1	A	core_nonrep	14	1	1
Rue3-1-31	3	11048630	11048631	1	C	core_nonrep	9	1	1
Rue3-1-31	3	11050114	11050115	1	C	core_nonrep	3	1	1
Rue3-1-31	3	11054597	11054598	1	T	nonrep	4	1	1
Rue3-1-31	3	11055122	11055123	1	G	core_nonrep	3	1	1
Rue3-1-31	3	11064977	11064978	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11065557	11065558	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11066301	11066302	1	G	core_nonrep	4	1	1
Rue3-1-31	3	11066448	11066449	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11075650	11075651	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	11079705	11079706	1	T	core_nonrep	6	1	1
Rue3-1-31	3	11089734	11089735	1	G	core_nonrep	19	0.857143	1
Rue3-1-31	3	11091610	11091611	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11094624	11094625	3	CAA	core_nonrep	3	1	1
Rue3-1-31	3	11106332	11106333	1	C	core_nonrep	5	1	1
Rue3-1-31	3	11107418	11107419	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11108403	11108404	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11111046	11111047	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	11111746	11111747	2	CT	nonrep	4	0.8	1
Rue3-1-31	3	11111917	11111918	1	A	core_nonrep	10	0.875	1
Rue3-1-31	3	11116303	11116304	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11120064	11120065	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	3	11120065	11120066	1	C	core_nonrep	8	0.7	1
Rue3-1-31	3	11121225	11121226	1	G	core_nonrep	10	0.833333	1
Rue3-1-31	3	11136916	11136917	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	3	11139765	11139766	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	3	11142348	11142349	2	AT	nonrep	3	1	1
Rue3-1-31	3	11143572	11143573	1	A	core_nonrep	8	1	1
Rue3-1-31	3	11146111	11146112	1	C	core_nonrep	10	0.875	1
Rue3-1-31	3	11147058	11147059	1	C	core_nonrep	10	0.857143	1
Rue3-1-31	3	11147358	11147359	1	T	core_nonrep	9	1	1
Rue3-1-31	3	11154964	11154965	1	C	nonrep	3	1	1
Rue3-1-31	3	11155393	11155394	1	T	core_nonrep	10	1	1
Rue3-1-31	3	11164946	11164947	1	A	core_nonrep	9	1	1
Rue3-1-31	3	11164991	11164992	1	C	core_nonrep	12	0.923077	1
Rue3-1-31	3	11165742	11165743	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11167252	11167253	1	T	core_nonrep	7	1	1
Rue3-1-31	3	11167991	11167992	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11183291	11183292	1	G	nonrep	3	1	1
Rue3-1-31	3	11183995	11183996	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	11184550	11184551	1	A	nonrep	3	1	1
Rue3-1-31	3	11186505	11186506	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11189911	11189912	3	ATA	core_nonrep	4	0.8	1
Rue3-1-31	3	11199562	11199563	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	11215240	11215241	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	11218344	11218345	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	3	11219812	11219813	2	TT	nonrep	3	1	1
Rue3-1-31	3	11221121	11221122	1	A	core	4	1	1.4
Rue3-1-31	3	11224224	11224225	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11226550	11226551	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11229969	11229970	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11231210	11231211	1	G	core_nonrep	4	1	1
Rue3-1-31	3	11243863	11243864	1	A	nonrep	3	0.75	1
Rue3-1-31	3	11244144	11244145	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	11249279	11249280	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	11250895	11250896	1	A	core_nonrep	9	1	1
Rue3-1-31	3	11264033	11264034	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11267690	11267691	1	A	nonrep	3	1	1
Rue3-1-31	3	11268544	11268545	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	11270542	11270543	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	11270980	11270981	1	T	core_nonrep	6	1	1
Rue3-1-31	3	11272726	11272727	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11272888	11272889	1	C	core_nonrep	5	1	1
Rue3-1-31	3	11276249	11276250	1	T	core_nonrep	6	1	1
Rue3-1-31	3	11276250	11276251	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11277435	11277436	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	11280370	11280371	2	CA	core_nonrep	6	1	1
Rue3-1-31	3	11281507	11281508	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11285848	11285849	1	T	core_nonrep	10	1	1
Rue3-1-31	3	11289684	11289685	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11290020	11290021	1	T	core_nonrep	7	1	1
Rue3-1-31	3	11301066	11301067	1	T	nonrep	4	0.8	1
Rue3-1-31	3	11301849	11301850	1	C	nonrep	3	0.75	1
Rue3-1-31	3	11302190	11302191	1	T	core_nonrep	9	1	1
Rue3-1-31	3	11305637	11305638	1	G	core_nonrep	6	1	1
Rue3-1-31	3	11307926	11307927	1	G	core	9	0.75	1.25
Rue3-1-31	3	11309749	11309750	1	A	nonrep	4	0.8	1
Rue3-1-31	3	11310730	11310731	1	G	core_nonrep	5	1	1
Rue3-1-31	3	11310882	11310883	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	11311031	11311032	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	11312391	11312392	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11322164	11322165	1	C	core_nonrep	3	1	1
Rue3-1-31	3	11325623	11325624	1	A	core_nonrep	9	0.857143	1.28571
Rue3-1-31	3	11327724	11327725	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11328087	11328088	1	T	core_nonrep	7	1	1
Rue3-1-31	3	11336053	11336054	1	G	core_nonrep	8	0.75	1
Rue3-1-31	3	11343875	11343876	1	A	core_nonrep	6	1	1
Rue3-1-31	3	11364805	11364806	1	A	nonrep	9	0.714286	1.41667
Rue3-1-31	3	11383684	11383685	1	G	core_nonrep	7	1	1
Rue3-1-31	3	11386139	11386140	1	C	core_nonrep	13	1	1
Rue3-1-31	3	11386140	11386141	1	T	core_nonrep	14	1	1
Rue3-1-31	3	11389261	11389262	2	AT	nonrep	5	0.714286	1
Rue3-1-31	3	11389485	11389486	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	11390181	11390182	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11397131	11397132	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	11400935	11400936	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11401149	11401150	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	11406988	11406989	1	A	core_nonrep	10	0.692308	1
Rue3-1-31	3	11431647	11431648	1	C	core_nonrep	6	1	1
Rue3-1-31	3	11435430	11435431	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11452715	11452716	1	C	core_nonrep	4	1	1
Rue3-1-31	3	11464563	11464564	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11470318	11470319	1	A	nonrep	4	0.8	1
Rue3-1-31	3	11470383	11470384	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11470878	11470879	1	A	core_nonrep	23	0.909091	1
Rue3-1-31	3	11472960	11472961	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11476181	11476182	1	A	core	5	0.714286	1.33333
Rue3-1-31	3	11477266	11477267	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11478351	11478352	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	11487962	11487963	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11490476	11490477	1	C	core_nonrep	8	1	1
Rue3-1-31	3	11493522	11493523	1	C	core_nonrep	3	1	1
Rue3-1-31	3	11496542	11496543	1	T	core	4	1	1.4
Rue3-1-31	3	11500750	11500751	1	G	core_nonrep	6	1	1
Rue3-1-31	3	11507808	11507809	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11510330	11510331	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	11526167	11526168	1	A	core_nonrep	8	1	1
Rue3-1-31	3	11527568	11527569	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	11528959	11528960	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11529632	11529633	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11532960	11532961	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	11590449	11590450	1	G	core_nonrep	4	1	1
Rue3-1-31	3	11610258	11610259	1	T	core	7	0.714286	1.3125
Rue3-1-31	3	11610815	11610816	1	C	core_nonrep	10	1	1
Rue3-1-31	3	11612704	11612705	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11616491	11616492	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	11616522	11616523	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11619392	11619393	1	G	core_nonrep	6	1	1
Rue3-1-31	3	11623240	11623241	1	G	core_nonrep	8	1	1
Rue3-1-31	3	11624159	11624160	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11626086	11626087	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	11652057	11652058	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	11664661	11664662	2	AA	core_nonrep	9	0.727273	1
Rue3-1-31	3	11677576	11677577	1	T	core_nonrep	6	0.8	1
Rue3-1-31	3	11682254	11682255	1	A	core_nonrep	33	0.84375	1
Rue3-1-31	3	11697581	11697582	1	A	core_nonrep	6	1	1
Rue3-1-31	3	11704562	11704563	1	G	nonrep	6	0.75	1
Rue3-1-31	3	11716587	11716588	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	3	11717015	11717016	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11725043	11725044	1	A	core_nonrep	6	1	1
Rue3-1-31	3	11725178	11725179	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11732960	11732961	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11732961	11732962	1	G	core_nonrep	4	0.75	1
Rue3-1-31	3	11733032	11733033	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11734196	11734197	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11734250	11734251	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11736111	11736112	1	A	core_nonrep	9	0.9	1
Rue3-1-31	3	11745741	11745742	1	T	nonrep	4	0.8	1
Rue3-1-31	3	11749180	11749181	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11751539	11751540	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11765770	11765771	1	A	core_nonrep	5	1	1
Rue3-1-31	3	11770560	11770561	1	A	core_nonrep	7	0.7	1
Rue3-1-31	3	11772096	11772097	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11778606	11778607	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11786081	11786082	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	11793234	11793235	1	T	core_nonrep	12	1	1
Rue3-1-31	3	11795045	11795046	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11810622	11810623	1	C	core_nonrep	4	1	1
Rue3-1-31	3	11812026	11812027	3	AAA	core_nonrep	4	1	1
Rue3-1-31	3	11814215	11814216	1	C	core_nonrep	5	1	1
Rue3-1-31	3	11814217	11814218	2	TT	core_nonrep	4	1	1
Rue3-1-31	3	11840411	11840412	1	T	core_nonrep	5	1	1
Rue3-1-31	3	11842831	11842832	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11843039	11843040	1	T	core_nonrep	7	1	1
Rue3-1-31	3	11843966	11843967	1	A	nonrep	5	0.833333	1
Rue3-1-31	3	11854127	11854128	1	A	core_nonrep	4	1	1
Rue3-1-31	3	11855192	11855193	1	C	core_nonrep	5	0.8	1
Rue3-1-31	3	11861215	11861216	1	T	core_nonrep	4	1	1.2
Rue3-1-31	3	11863128	11863129	1	C	core_nonrep	10	1	1.64286
Rue3-1-31	3	11867986	11867987	1	T	core_nonrep	4	1	1
Rue3-1-31	3	11868572	11868573	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	11870415	11870416	1	A	core_nonrep	6	1	1
Rue3-1-31	3	11878405	11878406	1	C	core_nonrep	18	0.944444	1
Rue3-1-31	3	11879639	11879640	1	G	core_nonrep	9	1	1.06667
Rue3-1-31	3	11884858	11884859	1	A	core_nonrep	9	1	1.16667
Rue3-1-31	3	11885259	11885260	1	A	core_nonrep	6	1	1
Rue3-1-31	3	11885387	11885388	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	11890363	11890364	1	A	core_nonrep	12	0.875	1
Rue3-1-31	3	11892408	11892409	1	A	nonrep	3	1	1
Rue3-1-31	3	11892410	11892411	1	A	nonrep	3	1	1
Rue3-1-31	3	11893573	11893574	1	T	core_nonrep	7	1	1
Rue3-1-31	3	11893574	11893575	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	11895182	11895183	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	11898461	11898462	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	11898552	11898553	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	11901792	11901793	1	G	core_nonrep	10	1	1
Rue3-1-31	3	11904614	11904615	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	11905695	11905696	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11905696	11905697	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11906052	11906053	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11906911	11906912	2	AT	core_nonrep	7	1	1
Rue3-1-31	3	11906996	11906997	2	CC	core_nonrep	7	0.857143	1
Rue3-1-31	3	11912766	11912767	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	11920322	11920323	1	A	core_nonrep	7	1	1
Rue3-1-31	3	11922049	11922050	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11923128	11923129	1	A	core_nonrep	9	1	1
Rue3-1-31	3	11926187	11926188	2	AC	core_nonrep	3	1	1
Rue3-1-31	3	11928114	11928115	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	11950208	11950209	1	G	nonrep	4	0.8	1
Rue3-1-31	3	11950288	11950289	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11956461	11956462	1	G	core_nonrep	3	1	1
Rue3-1-31	3	11957361	11957362	2	AC	core_nonrep	3	1	1
Rue3-1-31	3	11959701	11959702	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11962827	11962828	1	A	core_nonrep	10	1	1
Rue3-1-31	3	11962828	11962829	1	A	core_nonrep	10	1	1
Rue3-1-31	3	11969707	11969708	1	T	core_nonrep	3	1	1.14286
Rue3-1-31	3	11971668	11971669	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	3	11976642	11976643	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	11978326	11978327	1	T	core_nonrep	3	1	1
Rue3-1-31	3	11978916	11978917	1	T	core_nonrep	8	1	1
Rue3-1-31	3	11979088	11979089	1	C	core_nonrep	8	1	1
Rue3-1-31	3	11979356	11979357	1	A	core_nonrep	3	1	1
Rue3-1-31	3	11979357	11979358	1	G	core_nonrep	3	1	1
Rue3-1-31	3	11984280	11984281	1	T	core_nonrep	13	1	1
Rue3-1-31	3	11984794	11984795	1	T	core_nonrep	3	1	1.5
Rue3-1-31	3	12002119	12002120	1	A	core_nonrep	5	1	1
Rue3-1-31	3	12016112	12016113	1	T	core_nonrep	3	1	1
Rue3-1-31	3	12023302	12023303	1	A	core_nonrep	9	0.75	1
Rue3-1-31	3	12023303	12023304	1	G	core_nonrep	9	1	1
Rue3-1-31	3	12028579	12028580	2	GT	core_nonrep	11	0.888889	1
Rue3-1-31	3	12030747	12030748	1	A	core_nonrep	3	1	1
Rue3-1-31	3	12033215	12033216	1	T	core_nonrep	8	1	1
Rue3-1-31	3	12057289	12057290	1	T	core_nonrep	4	1	1
Rue3-1-31	3	12060846	12060847	1	T	core_nonrep	5	1	1.22222
Rue3-1-31	3	12063801	12063802	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	12101528	12101529	1	A	core_nonrep	9	1	1
Rue3-1-31	3	12105285	12105286	1	C	core_nonrep	6	1	1
Rue3-1-31	3	12105387	12105388	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	12124071	12124072	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	12126422	12126423	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	12128777	12128778	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	12128951	12128952	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	12128954	12128955	1	A	core_nonrep	5	1	1
Rue3-1-31	3	12128994	12128995	1	A	nonrep	3	1	1
Rue3-1-31	3	12136959	12136960	1	C	core_nonrep	5	1	1
Rue3-1-31	3	12139139	12139140	1	A	nonrep	4	0.8	1
Rue3-1-31	3	12139819	12139820	1	G	core_nonrep	3	1	1
Rue3-1-31	3	12141906	12141907	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	12150963	12150964	1	A	core_nonrep	3	1	1
Rue3-1-31	3	12161526	12161527	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12165395	12165396	1	C	core_nonrep	6	1	1
Rue3-1-31	3	12176929	12176930	1	C	core_nonrep	14	1	1
Rue3-1-31	3	12178892	12178893	1	A	core_nonrep	7	0.7	1.11111
Rue3-1-31	3	12191977	12191978	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12209522	12209523	1	C	core_nonrep	13	0.923077	1.25
Rue3-1-31	3	12209539	12209540	1	T	core_nonrep	8	1	1.11111
Rue3-1-31	3	12209691	12209692	1	G	core_nonrep	11	1	1.06667
Rue3-1-31	3	12236181	12236182	1	C	core_nonrep	6	1	1
Rue3-1-31	3	12237254	12237255	1	A	core_nonrep	3	1	1
Rue3-1-31	3	12237257	12237258	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	12240035	12240036	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	3	12258013	12258014	1	A	nonrep	3	0.75	1
Rue3-1-31	3	12262393	12262394	1	C	core_nonrep	7	1	1
Rue3-1-31	3	12263479	12263480	1	A	nonrep	5	0.833333	1
Rue3-1-31	3	12282871	12282872	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	3	12289114	12289115	3	AAA	core_nonrep	9	0.888889	1
Rue3-1-31	3	12293073	12293074	1	C	core_nonrep	7	0.75	1
Rue3-1-31	3	12297550	12297551	1	T	core_nonrep	7	1	1
Rue3-1-31	3	12298340	12298341	1	A	core_nonrep	7	1	1
Rue3-1-31	3	12319669	12319670	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	12351249	12351250	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	12365863	12365864	1	C	core_nonrep	9	1	1
Rue3-1-31	3	12368570	12368571	1	A	core_nonrep	9	1	1
Rue3-1-31	3	12371290	12371291	1	G	core_nonrep	6	1	1.1
Rue3-1-31	3	12371823	12371824	1	T	core_nonrep	7	0.7	1
Rue3-1-31	3	12372598	12372599	1	G	core_nonrep	8	1	1
Rue3-1-31	3	12373533	12373534	1	T	core_nonrep	8	1	1
Rue3-1-31	3	12375661	12375662	1	G	core_nonrep	16	0.933333	1
Rue3-1-31	3	12381745	12381746	1	C	core_nonrep	6	0.714286	1.69231
Rue3-1-31	3	12388260	12388261	1	G	core_nonrep	4	1	1
Rue3-1-31	3	12389826	12389827	1	T	core_nonrep	10	1	1
Rue3-1-31	3	12391145	12391146	1	A	core_nonrep	8	1	1
Rue3-1-31	3	12403271	12403272	1	A	nonrep	3	1	1
Rue3-1-31	3	12406078	12406079	1	A	core_nonrep	7	1	1
Rue3-1-31	3	12417670	12417671	1	T	core_nonrep	4	0.75	1.44444
Rue3-1-31	3	12421878	12421879	2	TG	core_nonrep	10	1	1
Rue3-1-31	3	12423280	12423281	1	T	core_nonrep	11	1	1.07143
Rue3-1-31	3	12424243	12424244	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	3	12424244	12424245	1	T	core_nonrep	9	1	1.25
Rue3-1-31	3	12446853	12446854	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12450846	12450847	1	T	core_nonrep	6	1	1
Rue3-1-31	3	12450850	12450851	1	T	core_nonrep	5	1	1
Rue3-1-31	3	12451134	12451135	1	A	core_nonrep	3	1	1
Rue3-1-31	3	12451737	12451738	1	C	core_nonrep	9	1	1
Rue3-1-31	3	12453701	12453702	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	12459558	12459559	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	12460764	12460765	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	12461763	12461764	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	12489312	12489313	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	3	12489767	12489768	1	T	core_nonrep	6	1	1
Rue3-1-31	3	12491206	12491207	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12496385	12496386	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	3	12505018	12505019	1	A	core_nonrep	9	1	1
Rue3-1-31	3	12505022	12505023	1	T	core_nonrep	10	0.75	1
Rue3-1-31	3	12526705	12526706	1	T	core_nonrep	13	0.6875	1.06061
Rue3-1-31	3	12544680	12544681	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	12550288	12550289	1	T	core_nonrep	4	1	1
Rue3-1-31	3	12565343	12565344	1	A	core_nonrep	3	1	1
Rue3-1-31	3	12576082	12576083	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	3	12583104	12583105	1	C	core_nonrep	15	0.916667	1
Rue3-1-31	3	12609427	12609428	1	T	nonrep	7	0.777778	1
Rue3-1-31	3	12611606	12611607	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	12612618	12612619	1	C	core_nonrep	10	1	1
Rue3-1-31	3	12615712	12615713	1	A	core_nonrep	14	1	1
Rue3-1-31	3	12615713	12615714	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	3	12623722	12623723	1	C	core_nonrep	7	1	1
Rue3-1-31	3	12629609	12629610	1	T	core_nonrep	6	1	1
Rue3-1-31	3	12633574	12633575	1	G	core_nonrep	7	1	1
Rue3-1-31	3	12639865	12639866	1	G	core_nonrep	8	0.75	1
Rue3-1-31	3	12642909	12642910	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	12644271	12644272	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12648892	12648893	1	G	nonrep	4	1	1
Rue3-1-31	3	12671098	12671099	1	G	core_nonrep	9	1	1
Rue3-1-31	3	12671792	12671793	1	G	core_nonrep	7	1	1
Rue3-1-31	3	12747224	12747225	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12757087	12757088	1	A	core_nonrep	8	1	1.25
Rue3-1-31	3	12766763	12766764	1	T	nonrep	9	0.818182	1
Rue3-1-31	3	12766939	12766940	1	C	core_nonrep	4	1	1
Rue3-1-31	3	12772771	12772772	1	A	nonrep	7	0.875	1.11111
Rue3-1-31	3	12775680	12775681	1	G	core_nonrep	8	1	1
Rue3-1-31	3	12779537	12779538	1	A	core_nonrep	6	0.714286	1.22222
Rue3-1-31	3	12812798	12812799	1	G	core_nonrep	8	1	1.1
Rue3-1-31	3	12815741	12815742	1	A	core_nonrep	5	1	1
Rue3-1-31	3	12817308	12817309	1	C	core_nonrep	17	0.928571	1
Rue3-1-31	3	12824806	12824807	1	T	core_nonrep	4	1	1
Rue3-1-31	3	12824819	12824820	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	12834639	12834640	1	C	core_nonrep	7	1	1
Rue3-1-31	3	12835909	12835910	1	G	core_nonrep	7	1	1
Rue3-1-31	3	12836122	12836123	1	G	nonrep	3	0.75	1.2
Rue3-1-31	3	12874046	12874047	1	T	core_nonrep	4	1	1.25
Rue3-1-31	3	12894441	12894442	1	C	core_nonrep	8	1	1.3
Rue3-1-31	3	12907639	12907640	1	A	core_nonrep	8	1	1
Rue3-1-31	3	12909667	12909668	1	A	core_nonrep	10	1	1
Rue3-1-31	3	12910455	12910456	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	12932267	12932268	1	T	core_nonrep	4	1	1
Rue3-1-31	3	12935827	12935828	1	A	core_nonrep	10	1	1
Rue3-1-31	3	12942470	12942471	1	T	core_nonrep	5	1	1
Rue3-1-31	3	12943729	12943730	1	A	core_nonrep	19	1	1
Rue3-1-31	3	12953936	12953937	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	12953938	12953939	1	G	core_nonrep	5	1	1.2
Rue3-1-31	3	12961712	12961713	1	A	core_nonrep	6	1	1.44444
Rue3-1-31	3	12972098	12972099	1	C	core_nonrep	9	0.833333	1
Rue3-1-31	3	12972165	12972166	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	12979255	12979256	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	12981381	12981382	1	T	core_nonrep	3	1	1
Rue3-1-31	3	12981668	12981669	1	T	core_nonrep	9	0.7	1
Rue3-1-31	3	12983116	12983117	1	G	core_nonrep	8	1	1
Rue3-1-31	3	12984378	12984379	1	A	core_nonrep	4	1	1
Rue3-1-31	3	12998317	12998318	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	12999209	12999210	1	G	core_nonrep	6	1	1
Rue3-1-31	3	13001795	13001796	1	C	core_nonrep	5	1	1.14286
Rue3-1-31	3	13004651	13004652	1	A	nonrep	6	0.857143	1
Rue3-1-31	3	13007757	13007758	1	G	core_nonrep	9	1	1
Rue3-1-31	3	13007811	13007812	1	G	nonrep	3	0.75	1
Rue3-1-31	3	13014276	13014277	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	3	13023006	13023007	1	C	core_nonrep	3	0.75	1.875
Rue3-1-31	3	13030976	13030977	1	T	core_nonrep	26	0.909091	1
Rue3-1-31	3	13035463	13035464	1	T	core_nonrep	7	1	1
Rue3-1-31	3	13035607	13035608	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	13045141	13045142	1	C	nonrep	3	1	1
Rue3-1-31	3	13047415	13047416	1	A	core_nonrep	8	1	1
Rue3-1-31	3	13047549	13047550	1	T	core_nonrep	10	1	1.16667
Rue3-1-31	3	13050321	13050322	1	T	nonrep	3	1	1
Rue3-1-31	3	13052972	13052973	1	A	core_nonrep	5	1	1
Rue3-1-31	3	13053620	13053621	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	13055128	13055129	1	C	core_nonrep	5	1	1
Rue3-1-31	3	13067091	13067092	1	A	core_nonrep	4	1	1
Rue3-1-31	3	13067260	13067261	1	A	nonrep	3	1	1
Rue3-1-31	3	13068556	13068557	1	A	core_nonrep	3	1	1
Rue3-1-31	3	13072325	13072326	1	T	core_nonrep	3	0.75	1.2
Rue3-1-31	3	13072732	13072733	1	T	core_nonrep	15	1	1
Rue3-1-31	3	13073184	13073185	1	A	core_nonrep	6	1	1
Rue3-1-31	3	13073406	13073407	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	3	13075480	13075481	1	T	core_nonrep	7	1	1
Rue3-1-31	3	13083123	13083124	1	A	core_nonrep	11	1	1.35294
Rue3-1-31	3	13084366	13084367	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	13084682	13084683	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	13086187	13086188	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	13101157	13101158	1	T	core_nonrep	13	1	1
Rue3-1-31	3	13110892	13110893	1	A	core_nonrep	26	0.923077	1.025
Rue3-1-31	3	13111474	13111475	1	C	core_nonrep	17	1	1
Rue3-1-31	3	13112902	13112903	1	T	core_nonrep	14	0.833333	1
Rue3-1-31	3	13113534	13113535	1	T	core_nonrep	12	1	1
Rue3-1-31	3	13113577	13113578	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	13119540	13119541	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	13120901	13120902	1	G	core_nonrep	14	0.764706	1.2
Rue3-1-31	3	13123433	13123434	2	TT	core_nonrep	15	0.75	1.21429
Rue3-1-31	3	13125962	13125963	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	13130832	13130833	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	13134803	13134804	1	T	core_nonrep	6	1	1.16667
Rue3-1-31	3	13135164	13135165	1	G	core_nonrep	3	1	1
Rue3-1-31	3	13137103	13137104	1	A	core_nonrep	6	1	1
Rue3-1-31	3	13145147	13145148	1	C	core_nonrep	11	0.875	1
Rue3-1-31	3	13145414	13145415	1	T	core_nonrep	18	0.941176	1
Rue3-1-31	3	13145700	13145701	1	A	core_nonrep	23	1	1.33333
Rue3-1-31	3	13147217	13147218	1	C	core_nonrep	9	1	1
Rue3-1-31	3	13152080	13152081	1	A	core_nonrep	21	0.944444	1.04167
Rue3-1-31	3	13152206	13152207	1	C	core_nonrep	31	0.785714	1
Rue3-1-31	3	13156961	13156962	1	T	core_nonrep	7	1	1
Rue3-1-31	3	13157017	13157018	1	A	core_nonrep	6	1	1
Rue3-1-31	3	13165141	13165142	1	A	core_nonrep	6	1	1.2
Rue3-1-31	3	13169614	13169615	2	AA	core_nonrep	10	0.857143	1.33333
Rue3-1-31	3	13174769	13174770	1	A	core_nonrep	7	1	1.1
Rue3-1-31	3	13179790	13179791	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	13200872	13200873	1	A	core_nonrep	14	1	1.0625
Rue3-1-31	3	13224830	13224831	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	13268650	13268651	1	A	nonrep	4	1	1
Rue3-1-31	3	13313663	13313664	1	G	core_nonrep	4	1	1.22222
Rue3-1-31	3	13314017	13314018	1	A	nonrep	4	1	1
Rue3-1-31	3	13316734	13316735	1	A	core_nonrep	10	1	1.09091
Rue3-1-31	3	13365912	13365913	1	C	core_nonrep	16	1	1
Rue3-1-31	3	13371936	13371937	1	T	core_nonrep	11	0.833333	1.40909
Rue3-1-31	3	13388694	13388695	1	T	core_nonrep	6	1	1
Rue3-1-31	3	13390053	13390054	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	3	13408674	13408675	1	T	core_nonrep	7	1	1.64286
Rue3-1-31	3	13420189	13420190	1	T	core_nonrep	3	0.75	1.14286
Rue3-1-31	3	13421357	13421358	2	GC	core_nonrep	14	1	1
Rue3-1-31	3	13423665	13423666	1	G	core_nonrep	8	1	1
Rue3-1-31	3	13425795	13425796	1	C	core_nonrep	4	1	1
Rue3-1-31	3	13426792	13426793	1	A	core_nonrep	6	1	1
Rue3-1-31	3	13429684	13429685	1	A	core_nonrep	13	1	1.0625
Rue3-1-31	3	13434434	13434435	1	G	core_nonrep	7	0.75	1
Rue3-1-31	3	13449587	13449588	1	N	core_nonrep	3	0.75	1
Rue3-1-31	3	13449588	13449589	1	N	core_nonrep	3	0.75	1.33333
Rue3-1-31	3	13467269	13467270	1	T	core_nonrep	4	1	1
Rue3-1-31	3	13476428	13476429	1	A	core_nonrep	17	0.933333	1
Rue3-1-31	3	13479016	13479017	1	G	core_nonrep	5	0.714286	1.15385
Rue3-1-31	3	13479352	13479353	1	A	core_nonrep	4	1	1
Rue3-1-31	3	13484168	13484169	1	T	core_nonrep	11	0.857143	1.70588
Rue3-1-31	3	13486529	13486530	1	T	core_nonrep	4	1	1
Rue3-1-31	3	13488984	13488985	1	A	core_nonrep	6	1	1
Rue3-1-31	3	13493085	13493086	1	A	core_nonrep	3	1	1
Rue3-1-31	3	13497476	13497477	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	13509394	13509395	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	13510819	13510820	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	13532615	13532616	1	T	core_nonrep	3	1	1
Rue3-1-31	3	13539796	13539797	1	T	core_nonrep	10	0.875	1
Rue3-1-31	3	13542533	13542534	1	T	core_nonrep	8	1	1
Rue3-1-31	3	13544671	13544672	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	13545243	13545244	1	A	core_nonrep	3	1	1
Rue3-1-31	3	13562768	13562769	1	T	core_nonrep	7	1	1
Rue3-1-31	3	13579822	13579823	1	C	nonrep	3	1	1.25
Rue3-1-31	3	13584849	13584850	1	C	core_nonrep	8	1	1
Rue3-1-31	3	13607129	13607130	1	T	core_nonrep	6	0.714286	1.125
Rue3-1-31	3	13620620	13620621	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	13621944	13621945	1	A	nonrep	7	0.7	1.35714
Rue3-1-31	3	13669907	13669908	1	A	core_nonrep	4	1	1
Rue3-1-31	3	13892686	13892687	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	3	13907899	13907900	1	C	nonrep	3	0.75	1
Rue3-1-31	3	13926857	13926858	1	G	core_nonrep	9	1	1.4
Rue3-1-31	3	13927952	13927953	1	C	core_nonrep	11	1	1
Rue3-1-31	3	13928429	13928430	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	13942689	13942690	1	G	nonrep	3	0.75	1
Rue3-1-31	3	13949157	13949158	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	14003288	14003289	1	C	core_nonrep	4	1	1
Rue3-1-31	3	14037381	14037382	1	G	core_nonrep	7	1	1.57143
Rue3-1-31	3	14062429	14062430	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14066447	14066448	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	14067151	14067152	1	A	core_nonrep	5	1	1
Rue3-1-31	3	14067153	14067154	1	C	core_nonrep	8	1	1
Rue3-1-31	3	14086303	14086304	1	T	core_nonrep	11	1	1.21429
Rue3-1-31	3	14095570	14095571	1	T	core_nonrep	5	1	1
Rue3-1-31	3	14095571	14095572	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	14117822	14117823	1	T	nonrep	5	0.714286	1.25
Rue3-1-31	3	14122818	14122819	1	T	core_nonrep	7	0.75	1
Rue3-1-31	3	14130581	14130582	1	C	core_nonrep	8	1	1
Rue3-1-31	3	14132883	14132884	1	A	core_nonrep	6	1	1
Rue3-1-31	3	14164630	14164631	1	A	core_nonrep	20	0.809524	1.78571
Rue3-1-31	3	14174785	14174786	1	A	core_nonrep	11	1	1
Rue3-1-31	3	14174992	14174993	1	T	core_nonrep	16	1	1
Rue3-1-31	3	14177622	14177623	1	T	core_nonrep	12	0.846154	1.33333
Rue3-1-31	3	14178173	14178174	1	C	core_nonrep	14	1	1
Rue3-1-31	3	14224978	14224979	1	A	core_nonrep	4	1	1.625
Rue3-1-31	3	14236217	14236218	1	G	core_nonrep	3	0.75	1.33333
Rue3-1-31	3	14236804	14236805	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	14236805	14236806	1	A	core_nonrep	11	1	1
Rue3-1-31	3	14238034	14238035	1	G	core_nonrep	3	1	1
Rue3-1-31	3	14238133	14238134	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	14239138	14239139	1	A	core_nonrep	16	1	1
Rue3-1-31	3	14239307	14239308	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14249990	14249991	1	A	core_nonrep	7	1	1
Rue3-1-31	3	14249991	14249992	1	C	nonrep	7	0.875	1
Rue3-1-31	3	14256681	14256682	1	A	core_nonrep	14	1	1
Rue3-1-31	3	14258746	14258747	1	C	core_nonrep	10	0.833333	1
Rue3-1-31	3	14307390	14307391	1	C	core_nonrep	13	1	1.30769
Rue3-1-31	3	14319277	14319278	2	TT	core_nonrep	6	1	1
Rue3-1-31	3	14322802	14322803	1	A	core_nonrep	3	1	1
Rue3-1-31	3	14324096	14324097	1	C	core_nonrep	5	1	1
Rue3-1-31	3	14325135	14325136	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	14325374	14325375	1	A	nonrep	3	0.75	1
Rue3-1-31	3	14327018	14327019	1	C	core_nonrep	6	1	1
Rue3-1-31	3	14328770	14328771	1	A	core_nonrep	6	1	1
Rue3-1-31	3	14336015	14336016	1	A	core_nonrep	3	1	1
Rue3-1-31	3	14357186	14357187	1	C	core_nonrep	3	1	1
Rue3-1-31	3	14358072	14358073	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	14390263	14390264	1	T	core_nonrep	8	0.833333	1.1
Rue3-1-31	3	14457912	14457913	1	C	core_nonrep	5	1	1
Rue3-1-31	3	14485831	14485832	1	A	core_nonrep	19	1	1
Rue3-1-31	3	14486713	14486714	1	T	core_nonrep	19	0.882353	1
Rue3-1-31	3	14487085	14487086	2	GT	core_nonrep	22	0.956522	1.06667
Rue3-1-31	3	14531313	14531314	1	A	core_nonrep	6	1	1.2
Rue3-1-31	3	14532122	14532123	1	C	core_nonrep	4	1	1
Rue3-1-31	3	14532391	14532392	1	A	core_nonrep	5	1	1
Rue3-1-31	3	14550317	14550318	2	AG	core_nonrep	3	1	1
Rue3-1-31	3	14576697	14576698	1	C	core_nonrep	6	1	1.28571
Rue3-1-31	3	14578256	14578257	1	A	core_nonrep	6	1	1
Rue3-1-31	3	14585291	14585292	1	G	core_nonrep	3	1	1
Rue3-1-31	3	14586898	14586899	1	G	core_nonrep	8	1	1
Rue3-1-31	3	14592048	14592049	1	G	core_nonrep	3	1	1
Rue3-1-31	3	14595180	14595181	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	14596978	14596979	1	C	nonrep	5	0.714286	1
Rue3-1-31	3	14597219	14597220	1	A	core_nonrep	4	1	1
Rue3-1-31	3	14597304	14597305	1	G	core_nonrep	4	1	1
Rue3-1-31	3	14597535	14597536	1	A	core_nonrep	5	1	1.27273
Rue3-1-31	3	14598853	14598854	1	T	core_nonrep	6	1	1
Rue3-1-31	3	14602053	14602054	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	14602578	14602579	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	3	14604743	14604744	1	G	core_nonrep	7	1	1.22222
Rue3-1-31	3	14615880	14615881	1	T	core_nonrep	8	1	1
Rue3-1-31	3	14615889	14615890	1	G	core_nonrep	8	1	1
Rue3-1-31	3	14617871	14617872	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14618137	14618138	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	14618323	14618324	1	A	nonrep	4	0.8	1
Rue3-1-31	3	14618604	14618605	2	TC	core_nonrep	5	1	1
Rue3-1-31	3	14619779	14619780	1	T	core_nonrep	6	1	1
Rue3-1-31	3	14624607	14624608	1	A	core_nonrep	3	1	1.75
Rue3-1-31	3	14629014	14629015	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	14629559	14629560	1	C	core_nonrep	20	1	1
Rue3-1-31	3	14644287	14644288	1	C	core_nonrep	7	1	1.25
Rue3-1-31	3	14653148	14653149	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	14653414	14653415	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	3	14660743	14660744	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	14660744	14660745	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14663413	14663414	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14668614	14668615	1	G	core_nonrep	12	0.9	1
Rue3-1-31	3	14668985	14668986	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	14670575	14670576	1	G	core_nonrep	12	0.916667	1
Rue3-1-31	3	14670576	14670577	2	AA	core_nonrep	13	0.785714	1
Rue3-1-31	3	14673343	14673344	1	G	core_nonrep	18	0.9375	1
Rue3-1-31	3	14673863	14673864	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	14677062	14677063	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	14683319	14683320	1	G	core_nonrep	15	1	1.22222
Rue3-1-31	3	14683320	14683321	2	TG	core_nonrep	15	1	1.22222
Rue3-1-31	3	14698283	14698284	1	T	core_nonrep	3	1	1
Rue3-1-31	3	14718541	14718542	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	14719146	14719147	1	G	core_nonrep	23	0.823529	1
Rue3-1-31	3	14740091	14740092	1	T	core_nonrep	5	1	1
Rue3-1-31	3	14741661	14741662	1	G	core_nonrep	12	0.9	1
Rue3-1-31	3	14742541	14742542	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	14742714	14742715	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	3	14744727	14744728	1	A	core_nonrep	11	1	1
Rue3-1-31	3	14751481	14751482	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	14753308	14753309	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	14758638	14758639	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	14759608	14759609	1	G	core_nonrep	9	1	1.09091
Rue3-1-31	3	14773940	14773941	3	CTT	core_nonrep	7	0.857143	1
Rue3-1-31	3	14775647	14775648	1	A	core_nonrep	11	1	1
Rue3-1-31	3	14776191	14776192	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	14777775	14777776	2	GA	core_nonrep	12	0.9	1
Rue3-1-31	3	14778889	14778890	1	A	core_nonrep	12	1	1
Rue3-1-31	3	14780914	14780915	1	C	core_nonrep	20	1	1
Rue3-1-31	3	14782374	14782375	1	T	core_nonrep	17	0.714286	1.34211
Rue3-1-31	3	14783313	14783314	1	T	core_nonrep	3	1	1
Rue3-1-31	3	14795071	14795072	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	14795968	14795969	1	G	core_nonrep	8	1	1
Rue3-1-31	3	14797709	14797710	1	C	core_nonrep	11	0.857143	1
Rue3-1-31	3	14800712	14800713	1	A	core_nonrep	5	1	1.14286
Rue3-1-31	3	14802097	14802098	1	A	core_nonrep	12	1	1
Rue3-1-31	3	14804730	14804731	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	14808891	14808892	1	T	core_nonrep	14	1	1.13333
Rue3-1-31	3	14810733	14810734	1	T	core_nonrep	9	1	1
Rue3-1-31	3	14811743	14811744	1	G	core_nonrep	18	1	1.18182
Rue3-1-31	3	14817222	14817223	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	14819422	14819423	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14822595	14822596	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	3	14823458	14823459	2	TA	nonrep	3	0.75	1
Rue3-1-31	3	14841158	14841159	1	C	core_nonrep	21	0.95	1
Rue3-1-31	3	14847583	14847584	1	T	core_nonrep	3	1	1
Rue3-1-31	3	14847781	14847782	1	A	core_nonrep	3	1	1
Rue3-1-31	3	14873635	14873636	1	G	core_nonrep	16	0.928571	1
Rue3-1-31	3	14877963	14877964	1	T	core_nonrep	5	1	1
Rue3-1-31	3	14891291	14891292	1	A	core_nonrep	3	1	1
Rue3-1-31	3	14892415	14892416	1	T	core_nonrep	10	0.75	1
Rue3-1-31	3	14894060	14894061	1	A	core_nonrep	4	1	1
Rue3-1-31	3	14895143	14895144	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	14901267	14901268	1	A	core_nonrep	8	1	1
Rue3-1-31	3	14905596	14905597	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	14907495	14907496	1	T	core_nonrep	11	1	1
Rue3-1-31	3	14909051	14909052	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	14912368	14912369	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	3	14916421	14916422	1	A	core_nonrep	3	1	1
Rue3-1-31	3	14918958	14918959	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	14919878	14919879	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14921730	14921731	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	14927660	14927661	2	AC	core_nonrep	13	0.923077	1
Rue3-1-31	3	14928241	14928242	1	T	core_nonrep	7	0.7	1.29412
Rue3-1-31	3	14928250	14928251	1	A	core_nonrep	10	0.75	1.57143
Rue3-1-31	3	14934533	14934534	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	14937735	14937736	1	A	core_nonrep	9	0.75	1
Rue3-1-31	3	14940990	14940991	1	A	core_nonrep	9	1	1
Rue3-1-31	3	14946861	14946862	1	T	core_nonrep	8	1	1
Rue3-1-31	3	14948892	14948893	1	G	core_nonrep	13	1	1
Rue3-1-31	3	14952388	14952389	1	T	core_nonrep	10	1	1
Rue3-1-31	3	14955218	14955219	1	T	core_nonrep	5	1	1
Rue3-1-31	3	14956982	14956983	1	A	nonrep	5	0.714286	1
Rue3-1-31	3	14963143	14963144	1	A	core_nonrep	14	1	1
Rue3-1-31	3	14963435	14963436	1	C	core_nonrep	3	1	1
Rue3-1-31	3	14963962	14963963	1	T	core_nonrep	4	1	1
Rue3-1-31	3	14964115	14964116	3	CAG	core_nonrep	3	1	1
Rue3-1-31	3	14985847	14985848	1	T	core_nonrep	5	1	1
Rue3-1-31	3	14986483	14986484	1	A	core_nonrep	5	1	1
Rue3-1-31	3	14986564	14986565	1	G	nonrep	3	1	1
Rue3-1-31	3	15012005	15012006	1	G	core_nonrep	12	1	1
Rue3-1-31	3	15013363	15013364	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	3	15020511	15020512	1	C	core_nonrep	3	1	1
Rue3-1-31	3	15020930	15020931	1	T	nonrep	3	0.75	1
Rue3-1-31	3	15035719	15035720	1	A	core_nonrep	11	1	1
Rue3-1-31	3	15036843	15036844	2	AT	core_nonrep	5	0.833333	1
Rue3-1-31	3	15037355	15037356	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15039529	15039530	1	T	core_nonrep	9	1	1
Rue3-1-31	3	15059548	15059549	1	A	core_nonrep	8	1	1
Rue3-1-31	3	15059565	15059566	1	C	core_nonrep	9	1	1
Rue3-1-31	3	15060649	15060650	1	A	core_nonrep	4	1	1
Rue3-1-31	3	15065655	15065656	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15070528	15070529	1	T	core_nonrep	7	0.7	1
Rue3-1-31	3	15073364	15073365	1	T	core_nonrep	8	1	1
Rue3-1-31	3	15073365	15073366	1	G	core_nonrep	9	1	1
Rue3-1-31	3	15076783	15076784	1	G	core_nonrep	15	0.923077	1
Rue3-1-31	3	15077677	15077678	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15083029	15083030	1	C	core_nonrep	7	1	1
Rue3-1-31	3	15086464	15086465	1	A	core_nonrep	8	0.7	1
Rue3-1-31	3	15091894	15091895	1	G	core_nonrep	8	0.875	1
Rue3-1-31	3	15107259	15107260	1	A	core_nonrep	6	1	1
Rue3-1-31	3	15118033	15118034	1	T	core_nonrep	11	1	1.08333
Rue3-1-31	3	15121950	15121951	1	G	core_nonrep	7	1	1
Rue3-1-31	3	15129791	15129792	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15139280	15139281	1	C	core_nonrep	6	1	1.375
Rue3-1-31	3	15178799	15178800	1	C	core_nonrep	9	0.875	1
Rue3-1-31	3	15183870	15183871	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	15190033	15190034	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15196217	15196218	1	C	core_nonrep	3	1	1
Rue3-1-31	3	15196564	15196565	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15199923	15199924	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	15202016	15202017	1	C	core_nonrep	13	1	1
Rue3-1-31	3	15215598	15215599	1	A	core_nonrep	13	0.9	1
Rue3-1-31	3	15216177	15216178	1	T	core_nonrep	8	1	1
Rue3-1-31	3	15226790	15226791	1	C	core_nonrep	12	1	1
Rue3-1-31	3	15227918	15227919	1	C	core_nonrep	17	0.928571	1
Rue3-1-31	3	15235767	15235768	1	G	core_nonrep	4	1	1
Rue3-1-31	3	15239741	15239742	1	G	nonrep	3	1	1
Rue3-1-31	3	15259599	15259600	1	C	core_nonrep	15	1	1
Rue3-1-31	3	15276157	15276158	1	C	core_nonrep	5	1	1
Rue3-1-31	3	15278107	15278108	1	C	core_nonrep	17	0.777778	1
Rue3-1-31	3	15279419	15279420	1	T	core_nonrep	7	1	1
Rue3-1-31	3	15282203	15282204	1	T	core_nonrep	3	1	1
Rue3-1-31	3	15290600	15290601	1	A	core_nonrep	5	1	1
Rue3-1-31	3	15292429	15292430	1	C	core_nonrep	6	1	1.28571
Rue3-1-31	3	15295951	15295952	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	3	15297228	15297229	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	3	15298650	15298651	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15302868	15302869	1	T	core_nonrep	7	0.875	1.18182
Rue3-1-31	3	15303855	15303856	1	T	core_nonrep	9	1	1
Rue3-1-31	3	15304641	15304642	2	GG	core_nonrep	3	1	1
Rue3-1-31	3	15307815	15307816	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	15308953	15308954	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	15310168	15310169	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	15325335	15325336	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	3	15346108	15346109	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15346449	15346450	1	T	nonrep	4	1	1
Rue3-1-31	3	15355883	15355884	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15357371	15357372	1	T	core_nonrep	3	1	1
Rue3-1-31	3	15357372	15357373	1	A	core_nonrep	5	1	1
Rue3-1-31	3	15357490	15357491	1	A	nonrep	4	0.8	1
Rue3-1-31	3	15363828	15363829	1	A	core_nonrep	4	1	1
Rue3-1-31	3	15363830	15363831	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15366807	15366808	1	A	core_nonrep	5	1	1
Rue3-1-31	3	15369914	15369915	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15378148	15378149	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	15380846	15380847	2	AT	core_nonrep	5	0.714286	1
Rue3-1-31	3	15383598	15383599	1	T	core_nonrep	8	1	1
Rue3-1-31	3	15396169	15396170	1	T	core_nonrep	3	1	1
Rue3-1-31	3	15400147	15400148	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	3	15404393	15404394	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	15407401	15407402	1	C	nonrep	3	1	1
Rue3-1-31	3	15408633	15408634	2	CC	nonrep	4	1	1
Rue3-1-31	3	15412125	15412126	1	A	core_nonrep	9	0.9	1
Rue3-1-31	3	15413353	15413354	1	T	core_nonrep	8	1	1
Rue3-1-31	3	15420359	15420360	1	A	nonrep	11	0.916667	1
Rue3-1-31	3	15427384	15427385	1	T	core_nonrep	7	0.8	1.27273
Rue3-1-31	3	15428369	15428370	1	T	nonrep	7	0.7	1
Rue3-1-31	3	15434843	15434844	1	T	core_nonrep	11	0.875	1.33333
Rue3-1-31	3	15435139	15435140	1	G	core_nonrep	4	1	1.28571
Rue3-1-31	3	15441678	15441679	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	15444223	15444224	1	A	core_nonrep	7	0.7	1
Rue3-1-31	3	15451370	15451371	1	A	core_nonrep	18	1	1
Rue3-1-31	3	15453418	15453419	1	A	core_nonrep	19	0.714286	1
Rue3-1-31	3	15456150	15456151	1	A	core_nonrep	33	0.682927	1
Rue3-1-31	3	15473760	15473761	1	A	core_nonrep	5	1	1.1
Rue3-1-31	3	15486399	15486400	1	T	core_nonrep	7	1	1
Rue3-1-31	3	15494205	15494206	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	15497243	15497244	1	A	nonrep	3	1	1
Rue3-1-31	3	15501376	15501377	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	3	15503034	15503035	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15503306	15503307	1	A	core_nonrep	5	1	1
Rue3-1-31	3	15504433	15504434	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	15519629	15519630	1	C	core_nonrep	5	1	1.14286
Rue3-1-31	3	15521926	15521927	1	C	core_nonrep	11	1	1
Rue3-1-31	3	15528992	15528993	1	T	core_nonrep	6	1	1
Rue3-1-31	3	15534671	15534672	1	T	core_nonrep	10	1	1
Rue3-1-31	3	15535075	15535076	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15535251	15535252	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15560283	15560284	1	T	nonrep	8	0.8	1
Rue3-1-31	3	15568743	15568744	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	15575942	15575943	1	A	nonrep	3	0.75	1
Rue3-1-31	3	15582875	15582876	1	C	core_nonrep	5	1	1
Rue3-1-31	3	15596516	15596517	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	15597339	15597340	1	G	core_nonrep	18	1	1
Rue3-1-31	3	15605769	15605770	1	G	core_nonrep	10	0.9	1
Rue3-1-31	3	15610955	15610956	1	G	core_nonrep	12	1	1
Rue3-1-31	3	15611018	15611019	1	G	core_nonrep	9	0.777778	1
Rue3-1-31	3	15619548	15619549	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	15624556	15624557	1	C	core_nonrep	4	1	1
Rue3-1-31	3	15629007	15629008	1	A	core_nonrep	8	1	1
Rue3-1-31	3	15632786	15632787	1	T	core_nonrep	3	1	1
Rue3-1-31	3	15656191	15656192	1	T	core_nonrep	9	1	1
Rue3-1-31	3	15656213	15656214	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	15664809	15664810	1	A	core_nonrep	4	1	1
Rue3-1-31	3	15664810	15664811	1	T	core_nonrep	4	1	1
Rue3-1-31	3	15676949	15676950	1	C	nonrep	3	0.75	1
Rue3-1-31	3	15677201	15677202	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	3	15682035	15682036	1	A	core_nonrep	19	0.9375	1
Rue3-1-31	3	15685563	15685564	1	A	core_nonrep	15	1	1
Rue3-1-31	3	15697730	15697731	1	C	nonrep	4	1	1
Rue3-1-31	3	15698170	15698171	1	T	core_nonrep	7	1	1
Rue3-1-31	3	15706976	15706977	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	15712399	15712400	1	T	core_nonrep	14	1	1
Rue3-1-31	3	15714470	15714471	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	15714473	15714474	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	15715767	15715768	1	T	nonrep	3	0.75	1
Rue3-1-31	3	15715768	15715769	1	A	core_nonrep	3	1	1
Rue3-1-31	3	15717692	15717693	1	T	core_nonrep	3	1	1
Rue3-1-31	3	15737830	15737831	1	A	core_nonrep	6	1	1.625
Rue3-1-31	3	15762872	15762873	1	C	core_nonrep	7	1	1
Rue3-1-31	3	15768995	15768996	1	C	core_nonrep	4	1	1
Rue3-1-31	3	15840956	15840957	1	C	core_nonrep	6	1	1
Rue3-1-31	3	15994062	15994063	1	A	core_nonrep	7	1	1
Rue3-1-31	3	15995967	15995968	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	15999273	15999274	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16003791	16003792	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16006992	16006993	1	T	core_nonrep	9	1	1
Rue3-1-31	3	16008806	16008807	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	3	16010698	16010699	1	C	core_nonrep	14	0.785714	1
Rue3-1-31	3	16013967	16013968	1	T	nonrep	3	1	1
Rue3-1-31	3	16014046	16014047	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16014305	16014306	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	3	16014306	16014307	1	G	core_nonrep	8	1	1
Rue3-1-31	3	16015197	16015198	1	C	core_nonrep	3	1	1
Rue3-1-31	3	16022108	16022109	1	G	core_nonrep	14	1	1
Rue3-1-31	3	16032524	16032525	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	16033516	16033517	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	16033635	16033636	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16035120	16035121	1	G	core_nonrep	5	1	1
Rue3-1-31	3	16035473	16035474	1	T	nonrep	10	0.769231	1
Rue3-1-31	3	16035977	16035978	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16037127	16037128	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16037306	16037307	1	C	core_nonrep	7	1	1
Rue3-1-31	3	16038910	16038911	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	16038956	16038957	1	G	core_nonrep	5	0.75	1
Rue3-1-31	3	16040636	16040637	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16041548	16041549	2	TA	core_nonrep	7	0.875	1
Rue3-1-31	3	16041549	16041550	1	C	core_nonrep	9	0.777778	1
Rue3-1-31	3	16042079	16042080	1	T	core_nonrep	10	0.875	1
Rue3-1-31	3	16043111	16043112	1	G	core_nonrep	7	1	1
Rue3-1-31	3	16043764	16043765	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	16044023	16044024	1	C	core_nonrep	8	1	1
Rue3-1-31	3	16044178	16044179	1	G	nonrep	3	0.75	1
Rue3-1-31	3	16046950	16046951	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	16049131	16049132	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16056638	16056639	1	C	core_nonrep	3	0.75	1.4
Rue3-1-31	3	16063873	16063874	2	TT	core_nonrep	6	0.714286	1
Rue3-1-31	3	16065423	16065424	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	16065432	16065433	1	C	core_nonrep	10	0.875	1
Rue3-1-31	3	16081017	16081018	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	16085583	16085584	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16090349	16090350	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16090856	16090857	1	A	core_nonrep	8	1	1
Rue3-1-31	3	16090862	16090863	1	T	core_nonrep	7	1	1
Rue3-1-31	3	16090993	16090994	1	A	nonrep	3	1	1
Rue3-1-31	3	16091669	16091670	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16092943	16092944	1	G	core_nonrep	6	1	1
Rue3-1-31	3	16100698	16100699	1	T	nonrep	3	0.75	1.5
Rue3-1-31	3	16102118	16102119	1	T	core_nonrep	4	1	1.16667
Rue3-1-31	3	16118636	16118637	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16118638	16118639	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16120021	16120022	1	G	core_nonrep	4	1	1
Rue3-1-31	3	16120085	16120086	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	3	16120087	16120088	1	T	core_nonrep	8	1	1
Rue3-1-31	3	16121162	16121163	1	C	core_nonrep	9	1	1
Rue3-1-31	3	16122534	16122535	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	16125952	16125953	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16128001	16128002	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	16134126	16134127	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16135871	16135872	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16139625	16139626	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16139641	16139642	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16140440	16140441	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16143655	16143656	1	A	core_nonrep	7	0.8	1
Rue3-1-31	3	16144524	16144525	2	AA	nonrep	3	1	1
Rue3-1-31	3	16144727	16144728	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	16145146	16145147	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	16145655	16145656	2	AT	core_nonrep	6	1	1
Rue3-1-31	3	16148305	16148306	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16149663	16149664	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	16151815	16151816	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16152448	16152449	1	G	core_nonrep	6	1	1
Rue3-1-31	3	16156097	16156098	2	GC	core_nonrep	6	0.857143	1
Rue3-1-31	3	16156184	16156185	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16159378	16159379	1	T	nonrep	3	1	1
Rue3-1-31	3	16163025	16163026	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16163670	16163671	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16164912	16164913	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16165126	16165127	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16171656	16171657	1	A	core_nonrep	4	1	1.2
Rue3-1-31	3	16174965	16174966	1	A	core_nonrep	7	1	1
Rue3-1-31	3	16179860	16179861	1	C	core_nonrep	5	0.8	1
Rue3-1-31	3	16190232	16190233	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	3	16193601	16193602	1	C	core_nonrep	3	1	1
Rue3-1-31	3	16197735	16197736	2	CG	core_nonrep	3	1	1
Rue3-1-31	3	16198487	16198488	1	G	core_nonrep	4	1	1
Rue3-1-31	3	16199206	16199207	1	T	core_nonrep	7	1	1
Rue3-1-31	3	16199764	16199765	1	T	core_nonrep	16	0.923077	1
Rue3-1-31	3	16201515	16201516	1	T	core_nonrep	9	0.875	1
Rue3-1-31	3	16202465	16202466	1	C	nonrep	5	0.833333	1
Rue3-1-31	3	16203238	16203239	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16204822	16204823	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	16216217	16216218	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16216224	16216225	1	C	core_nonrep	5	1	1
Rue3-1-31	3	16216894	16216895	1	A	nonrep	3	1	1
Rue3-1-31	3	16217509	16217510	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	16217511	16217512	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	3	16219490	16219491	1	A	core_nonrep	21	1	1
Rue3-1-31	3	16223246	16223247	2	AA	core_nonrep	7	0.777778	1
Rue3-1-31	3	16240135	16240136	1	G	core_nonrep	3	1	1
Rue3-1-31	3	16240660	16240661	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16254044	16254045	1	G	core_nonrep	3	1	1
Rue3-1-31	3	16254227	16254228	1	A	core_nonrep	7	1	1
Rue3-1-31	3	16262127	16262128	1	C	core_nonrep	5	1	1
Rue3-1-31	3	16267698	16267699	1	T	nonrep	3	1	1
Rue3-1-31	3	16276787	16276788	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16276894	16276895	1	A	nonrep	3	1	1
Rue3-1-31	3	16278400	16278401	1	C	nonrep	3	1	1
Rue3-1-31	3	16285018	16285019	1	A	core_nonrep	7	1	1
Rue3-1-31	3	16286457	16286458	1	T	nonrep	5	1	1
Rue3-1-31	3	16291951	16291952	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16292512	16292513	2	AG	core_nonrep	5	1	1
Rue3-1-31	3	16293785	16293786	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16297170	16297171	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16299975	16299976	1	C	core_nonrep	11	0.875	1
Rue3-1-31	3	16300805	16300806	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	3	16305307	16305308	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16315529	16315530	1	G	core_nonrep	10	1	1
Rue3-1-31	3	16316377	16316378	1	T	core_nonrep	10	0.833333	1
Rue3-1-31	3	16317795	16317796	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	16321776	16321777	1	G	core_nonrep	6	1	1
Rue3-1-31	3	16327456	16327457	1	T	core_nonrep	14	1	1
Rue3-1-31	3	16334000	16334001	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	16365527	16365528	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16371891	16371892	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16372006	16372007	1	A	core_nonrep	11	1	1
Rue3-1-31	3	16373572	16373573	2	GC	core_nonrep	9	0.777778	1
Rue3-1-31	3	16377403	16377404	2	TG	core_nonrep	5	0.833333	1
Rue3-1-31	3	16377955	16377956	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16378598	16378599	1	T	core_nonrep	13	1	1
Rue3-1-31	3	16384837	16384838	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	16389698	16389699	1	C	core_nonrep	8	1	1
Rue3-1-31	3	16390522	16390523	1	C	core_nonrep	4	1	1
Rue3-1-31	3	16392847	16392848	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16394838	16394839	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16397191	16397192	1	A	core_nonrep	9	1	1
Rue3-1-31	3	16397192	16397193	1	A	core_nonrep	9	1	1
Rue3-1-31	3	16398995	16398996	1	T	core_nonrep	17	0.882353	1
Rue3-1-31	3	16399352	16399353	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16399459	16399460	1	A	core_nonrep	8	1	1
Rue3-1-31	3	16407098	16407099	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16410257	16410258	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	16416082	16416083	1	G	core_nonrep	3	1	1
Rue3-1-31	3	16417482	16417483	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16418410	16418411	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	16418464	16418465	1	A	nonrep	3	0.75	1
Rue3-1-31	3	16420464	16420465	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	16423247	16423248	1	T	core_nonrep	9	0.75	1
Rue3-1-31	3	16423594	16423595	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	3	16435756	16435757	2	AG	core_nonrep	5	1	1
Rue3-1-31	3	16437661	16437662	1	T	nonrep	3	1	1
Rue3-1-31	3	16440670	16440671	1	T	core_nonrep	12	1	1
Rue3-1-31	3	16441177	16441178	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	3	16441781	16441782	1	A	core_nonrep	10	0.75	1
Rue3-1-31	3	16443161	16443162	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	16444706	16444707	1	G	core_nonrep	7	1	1
Rue3-1-31	3	16445834	16445835	1	A	core_nonrep	19	1	1
Rue3-1-31	3	16448426	16448427	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16453348	16453349	1	A	core_nonrep	8	1	1
Rue3-1-31	3	16454067	16454068	1	C	core_nonrep	6	1	1
Rue3-1-31	3	16455006	16455007	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16455669	16455670	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16459174	16459175	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	16460153	16460154	1	C	nonrep	3	0.75	1
Rue3-1-31	3	16461488	16461489	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16466358	16466359	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	16467417	16467418	1	G	nonrep	3	1	1
Rue3-1-31	3	16471516	16471517	1	C	core_nonrep	6	1	1
Rue3-1-31	3	16473720	16473721	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16473986	16473987	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	3	16474419	16474420	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16488628	16488629	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16495888	16495889	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16500746	16500747	1	G	nonrep	4	0.8	1
Rue3-1-31	3	16501504	16501505	2	AA	core_nonrep	3	0.75	1.125
Rue3-1-31	3	16508795	16508796	2	TC	core_nonrep	3	0.75	1
Rue3-1-31	3	16509532	16509533	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	16509684	16509685	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	3	16525062	16525063	1	A	core_nonrep	8	1	1
Rue3-1-31	3	16542765	16542766	1	G	core_nonrep	12	1	1
Rue3-1-31	3	16542871	16542872	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16546729	16546730	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	16548492	16548493	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	3	16560815	16560816	1	G	core_nonrep	4	1	1
Rue3-1-31	3	16562677	16562678	1	T	core_nonrep	10	1	1
Rue3-1-31	3	16565794	16565795	2	GA	core_nonrep	8	0.833333	1
Rue3-1-31	3	16566848	16566849	1	A	nonrep	3	0.75	1
Rue3-1-31	3	16569282	16569283	1	G	core_nonrep	4	1	1
Rue3-1-31	3	16570341	16570342	2	CT	nonrep	4	1	1
Rue3-1-31	3	16570759	16570760	3	TTT	core_nonrep	6	1	1
Rue3-1-31	3	16572527	16572528	1	A	core_nonrep	10	1	1
Rue3-1-31	3	16575051	16575052	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	16575122	16575123	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16579412	16579413	1	G	core_nonrep	4	1	1
Rue3-1-31	3	16585828	16585829	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16586755	16586756	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16586846	16586847	3	GTG	core_nonrep	8	0.75	1
Rue3-1-31	3	16588971	16588972	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16600610	16600611	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	3	16606825	16606826	2	AA	core_nonrep	11	0.875	1
Rue3-1-31	3	16611580	16611581	1	G	core_nonrep	5	1	1
Rue3-1-31	3	16615848	16615849	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16616449	16616450	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16616626	16616627	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16618275	16618276	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16625350	16625351	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16626530	16626531	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16630120	16630121	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	16631886	16631887	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16631888	16631889	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16637079	16637080	1	T	nonrep	3	1	1
Rue3-1-31	3	16638641	16638642	1	G	core_nonrep	5	1	1
Rue3-1-31	3	16638737	16638738	1	G	core_nonrep	5	1	1
Rue3-1-31	3	16639511	16639512	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	16646217	16646218	1	G	core_nonrep	8	1	1
Rue3-1-31	3	16661170	16661171	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	16661477	16661478	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16667457	16667458	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16667624	16667625	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16670700	16670701	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16686268	16686269	1	A	core_nonrep	12	1	1
Rue3-1-31	3	16686884	16686885	1	T	nonrep	3	1	1
Rue3-1-31	3	16699396	16699397	1	G	core_nonrep	12	1	1
Rue3-1-31	3	16699937	16699938	2	CA	core_nonrep	18	1	1
Rue3-1-31	3	16700289	16700290	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16701178	16701179	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16701537	16701538	1	G	core_nonrep	7	1	1
Rue3-1-31	3	16701733	16701734	2	TC	core_nonrep	7	0.857143	1
Rue3-1-31	3	16714384	16714385	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16714750	16714751	2	GT	core_nonrep	5	1	1
Rue3-1-31	3	16715019	16715020	1	A	nonrep	3	1	1
Rue3-1-31	3	16715348	16715349	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	16715472	16715473	2	AA	nonrep	4	0.8	1
Rue3-1-31	3	16719294	16719295	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	3	16723069	16723070	1	T	nonrep	3	1	1
Rue3-1-31	3	16731995	16731996	2	TT	nonrep	3	1	1
Rue3-1-31	3	16731997	16731998	1	G	core_nonrep	3	1	1
Rue3-1-31	3	16750173	16750174	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	16752091	16752092	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16752092	16752093	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16753501	16753502	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16753875	16753876	2	GA	core_nonrep	5	1	1
Rue3-1-31	3	16755383	16755384	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16757081	16757082	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16767147	16767148	1	C	core_nonrep	7	1	1
Rue3-1-31	3	16770728	16770729	1	T	core_nonrep	9	1	1
Rue3-1-31	3	16772253	16772254	1	T	core_nonrep	8	1	1
Rue3-1-31	3	16778028	16778029	3	TCC	core_nonrep	5	1	1
Rue3-1-31	3	16779533	16779534	1	A	core_nonrep	8	1	1
Rue3-1-31	3	16784370	16784371	1	C	core_nonrep	3	1	1
Rue3-1-31	3	16784373	16784374	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16786196	16786197	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16786593	16786594	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16788899	16788900	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	16789253	16789254	1	G	core_nonrep	6	1	1
Rue3-1-31	3	16796450	16796451	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	3	16796451	16796452	1	C	core_nonrep	10	1	1
Rue3-1-31	3	16804466	16804467	1	T	core_nonrep	7	1	1
Rue3-1-31	3	16804793	16804794	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	16806006	16806007	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16807998	16807999	1	C	core_nonrep	6	1	1
Rue3-1-31	3	16812040	16812041	1	C	core_nonrep	5	1	1
Rue3-1-31	3	16812041	16812042	1	A	core_nonrep	7	1	1
Rue3-1-31	3	16813808	16813809	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	3	16814054	16814055	1	T	core_nonrep	8	1	1
Rue3-1-31	3	16818892	16818893	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	3	16820821	16820822	1	A	core_nonrep	14	1	1
Rue3-1-31	3	16826691	16826692	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16827965	16827966	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16831212	16831213	1	A	core_nonrep	9	0.875	1
Rue3-1-31	3	16834051	16834052	1	T	core_nonrep	18	0.894737	1
Rue3-1-31	3	16834052	16834053	1	C	core_nonrep	19	1	1
Rue3-1-31	3	16834532	16834533	1	A	core_nonrep	4	1	1
Rue3-1-31	3	16848876	16848877	1	A	core_nonrep	12	1	1
Rue3-1-31	3	16849236	16849237	1	G	core_nonrep	5	1	1
Rue3-1-31	3	16849776	16849777	1	T	core_nonrep	8	1	1
Rue3-1-31	3	16851493	16851494	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16851739	16851740	3	TTG	core_nonrep	13	0.733333	1
Rue3-1-31	3	16857724	16857725	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	16868948	16868949	2	AA	core_nonrep	9	0.888889	1
Rue3-1-31	3	16877649	16877650	1	A	nonrep	3	0.75	1
Rue3-1-31	3	16889517	16889518	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16889518	16889519	1	C	core_nonrep	6	1	1
Rue3-1-31	3	16889569	16889570	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16901660	16901661	1	G	core_nonrep	12	0.9	1
Rue3-1-31	3	16901661	16901662	1	A	core_nonrep	13	1	1
Rue3-1-31	3	16910570	16910571	1	T	core_nonrep	4	1	1
Rue3-1-31	3	16912588	16912589	1	G	core_nonrep	3	1	1.25
Rue3-1-31	3	16916696	16916697	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	16920875	16920876	1	C	core_nonrep	22	1	1
Rue3-1-31	3	16920876	16920877	1	G	core_nonrep	21	0.9375	1
Rue3-1-31	3	16921282	16921283	1	G	core_nonrep	3	1	1
Rue3-1-31	3	16922193	16922194	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	16922505	16922506	3	TTG	core_nonrep	4	1	1
Rue3-1-31	3	16928551	16928552	1	G	core_nonrep	6	1	1
Rue3-1-31	3	16929127	16929128	1	G	nonrep	10	0.769231	1
Rue3-1-31	3	16930118	16930119	2	TT	core_nonrep	11	0.916667	1
Rue3-1-31	3	16933615	16933616	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	16942392	16942393	1	A	core_nonrep	5	1	1
Rue3-1-31	3	16943399	16943400	1	A	core_nonrep	10	1	1
Rue3-1-31	3	16943416	16943417	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16945142	16945143	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16949113	16949114	1	T	nonrep	3	1	1
Rue3-1-31	3	16951645	16951646	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16952728	16952729	1	T	core_nonrep	3	1	1
Rue3-1-31	3	16957451	16957452	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	16963243	16963244	1	C	core_nonrep	8	1	1
Rue3-1-31	3	16966122	16966123	1	T	core_nonrep	16	0.833333	1
Rue3-1-31	3	16969884	16969885	1	C	core_nonrep	13	0.888889	1
Rue3-1-31	3	16972257	16972258	1	A	core_nonrep	17	0.933333	1
Rue3-1-31	3	16972258	16972259	1	G	core_nonrep	19	0.9375	1
Rue3-1-31	3	16974029	16974030	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16977592	16977593	1	A	core_nonrep	6	1	1
Rue3-1-31	3	16984472	16984473	1	A	core_nonrep	3	1	1
Rue3-1-31	3	16985964	16985965	1	T	core_nonrep	5	1	1
Rue3-1-31	3	16995191	16995192	1	T	core_nonrep	6	1	1
Rue3-1-31	3	16999190	16999191	1	T	core_nonrep	9	1	1
Rue3-1-31	3	17004933	17004934	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	17008219	17008220	1	T	core_nonrep	9	1	1
Rue3-1-31	3	17017626	17017627	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	3	17017627	17017628	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	17020308	17020309	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17020824	17020825	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17022671	17022672	1	T	nonrep	4	0.8	1
Rue3-1-31	3	17023247	17023248	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17035549	17035550	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	17038315	17038316	1	T	nonrep	3	1	1
Rue3-1-31	3	17038595	17038596	1	T	core_nonrep	5	1	1
Rue3-1-31	3	17057188	17057189	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17062915	17062916	1	G	core_nonrep	3	1	1
Rue3-1-31	3	17079116	17079117	1	G	core_nonrep	9	0.875	1.2
Rue3-1-31	3	17089170	17089171	1	T	core_nonrep	12	1	1
Rue3-1-31	3	17090246	17090247	1	C	nonrep	4	1	1
Rue3-1-31	3	17092518	17092519	1	T	nonrep	3	0.75	1
Rue3-1-31	3	17092760	17092761	2	AC	core_nonrep	6	1	1
Rue3-1-31	3	17099099	17099100	1	G	core_nonrep	3	1	1
Rue3-1-31	3	17099450	17099451	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17099586	17099587	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	17100137	17100138	1	T	core_nonrep	10	1	1
Rue3-1-31	3	17100237	17100238	3	ATC	core_nonrep	11	0.916667	1
Rue3-1-31	3	17101818	17101819	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	17102491	17102492	1	A	core_nonrep	8	1	1
Rue3-1-31	3	17103118	17103119	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17105369	17105370	1	T	core_nonrep	14	0.909091	1
Rue3-1-31	3	17109085	17109086	1	G	core_nonrep	3	1	1
Rue3-1-31	3	17109290	17109291	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17110988	17110989	1	T	core_nonrep	6	1	1
Rue3-1-31	3	17114101	17114102	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17127501	17127502	1	C	core_nonrep	3	1	1
Rue3-1-31	3	17129381	17129382	1	G	core_nonrep	11	1	1
Rue3-1-31	3	17129768	17129769	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	17130112	17130113	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17131364	17131365	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17131589	17131590	1	T	core_nonrep	8	1	1
Rue3-1-31	3	17132067	17132068	1	A	core_nonrep	8	1	1
Rue3-1-31	3	17134461	17134462	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17134465	17134466	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	3	17137825	17137826	2	AC	core_nonrep	6	1	1
Rue3-1-31	3	17138914	17138915	1	G	core_nonrep	4	1	1
Rue3-1-31	3	17138982	17138983	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	17139029	17139030	1	A	core_nonrep	10	1	1
Rue3-1-31	3	17146210	17146211	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17156232	17156233	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17158398	17158399	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	17164409	17164410	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	3	17165756	17165757	1	A	core_nonrep	11	1	1
Rue3-1-31	3	17168548	17168549	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17170790	17170791	1	G	core_nonrep	10	1	1
Rue3-1-31	3	17176467	17176468	1	T	nonrep	4	0.8	1
Rue3-1-31	3	17176514	17176515	1	T	nonrep	4	0.8	1
Rue3-1-31	3	17177632	17177633	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	17177641	17177642	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	17180447	17180448	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	17180950	17180951	1	C	core_nonrep	6	0.75	1
Rue3-1-31	3	17182613	17182614	1	A	core_nonrep	6	1	1
Rue3-1-31	3	17183148	17183149	1	C	core_nonrep	16	1	1
Rue3-1-31	3	17184706	17184707	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	17185400	17185401	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	17187878	17187879	1	A	core_nonrep	13	0.785714	1
Rue3-1-31	3	17188385	17188386	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	17202763	17202764	1	G	core_nonrep	9	1	1
Rue3-1-31	3	17210426	17210427	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17211281	17211282	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	17213115	17213116	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	3	17215134	17215135	1	G	core_nonrep	5	1	1
Rue3-1-31	3	17215260	17215261	1	T	nonrep	3	1	1
Rue3-1-31	3	17220110	17220111	1	A	core_nonrep	13	1	1
Rue3-1-31	3	17221141	17221142	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17221839	17221840	1	A	nonrep	3	0.75	1
Rue3-1-31	3	17223868	17223869	1	C	core_nonrep	3	1	1
Rue3-1-31	3	17230642	17230643	1	C	core_nonrep	6	0.75	1
Rue3-1-31	3	17231066	17231067	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	17235066	17235067	1	A	core_nonrep	7	0.7	1
Rue3-1-31	3	17242590	17242591	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	3	17245035	17245036	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	17248021	17248022	3	GAA	core_nonrep	7	0.777778	1
Rue3-1-31	3	17259730	17259731	1	A	core_nonrep	11	0.9	1
Rue3-1-31	3	17261448	17261449	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	17261889	17261890	1	T	core_nonrep	5	1	1
Rue3-1-31	3	17262511	17262512	2	TC	core_nonrep	9	1	1
Rue3-1-31	3	17263977	17263978	1	G	core_nonrep	3	1	1
Rue3-1-31	3	17266035	17266036	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17268235	17268236	1	T	core_nonrep	8	1	1
Rue3-1-31	3	17269810	17269811	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	3	17270836	17270837	1	A	core_nonrep	6	1	1
Rue3-1-31	3	17270964	17270965	1	A	core_nonrep	3	1	1
Rue3-1-31	3	17270972	17270973	1	T	nonrep	4	0.8	1
Rue3-1-31	3	17273017	17273018	1	G	core_nonrep	12	1	1
Rue3-1-31	3	17282290	17282291	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	17285687	17285688	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17289547	17289548	1	A	core_nonrep	8	1	1
Rue3-1-31	3	17290625	17290626	2	TA	core_nonrep	10	0.8	1
Rue3-1-31	3	17312792	17312793	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	17315467	17315468	1	C	core_nonrep	7	0.75	1
Rue3-1-31	3	17318380	17318381	1	G	core_nonrep	6	1	1
Rue3-1-31	3	17318384	17318385	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17321913	17321914	1	G	core_nonrep	8	1	1
Rue3-1-31	3	17332881	17332882	2	TA	core_nonrep	4	1	1
Rue3-1-31	3	17332919	17332920	1	C	core_nonrep	4	1	1
Rue3-1-31	3	17338449	17338450	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	3	17338847	17338848	1	G	core_nonrep	7	1	1
Rue3-1-31	3	17343920	17343921	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	17355688	17355689	1	A	core_nonrep	6	1	1
Rue3-1-31	3	17382366	17382367	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17390244	17390245	1	A	core_nonrep	10	1	1
Rue3-1-31	3	17390301	17390302	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17391728	17391729	1	T	core_nonrep	5	1	1
Rue3-1-31	3	17402142	17402143	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17411904	17411905	1	A	core_nonrep	9	0.9	1
Rue3-1-31	3	17429292	17429293	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17440572	17440573	1	A	nonrep	5	1	1
Rue3-1-31	3	17448310	17448311	1	C	core_nonrep	4	1	1
Rue3-1-31	3	17450050	17450051	1	T	core_nonrep	10	0.7	1
Rue3-1-31	3	17452043	17452044	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	17452127	17452128	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	17458777	17458778	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17459847	17459848	2	TT	core_nonrep	10	0.818182	1
Rue3-1-31	3	17465795	17465796	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17468206	17468207	1	A	core_nonrep	3	1	1
Rue3-1-31	3	17469890	17469891	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17471529	17471530	1	T	core_nonrep	11	1	1
Rue3-1-31	3	17488248	17488249	1	C	core_nonrep	5	1	1
Rue3-1-31	3	17490021	17490022	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	17490141	17490142	1	G	nonrep	3	1	1
Rue3-1-31	3	17491428	17491429	2	AG	core_nonrep	11	1	1
Rue3-1-31	3	17505914	17505915	1	T	core_nonrep	11	1	1
Rue3-1-31	3	17512311	17512312	1	C	core_nonrep	5	1	1
Rue3-1-31	3	17512312	17512313	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	17512633	17512634	1	A	core_nonrep	6	1	1
Rue3-1-31	3	17513199	17513200	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17514191	17514192	1	A	core_nonrep	7	1	1
Rue3-1-31	3	17514212	17514213	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	17517424	17517425	1	G	core_nonrep	4	1	1
Rue3-1-31	3	17517618	17517619	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17518523	17518524	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17520823	17520824	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	3	17521100	17521101	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	17533996	17533997	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	17541761	17541762	1	A	core_nonrep	9	1	1
Rue3-1-31	3	17549959	17549960	1	G	core_nonrep	9	1	1
Rue3-1-31	3	17552752	17552753	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17555028	17555029	2	GA	core_nonrep	4	0.8	1
Rue3-1-31	3	17558748	17558749	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	17576712	17576713	1	G	core_nonrep	3	1	1
Rue3-1-31	3	17615353	17615354	1	T	core_nonrep	4	1	1
Rue3-1-31	3	17615354	17615355	1	G	core_nonrep	4	1	1
Rue3-1-31	3	17636601	17636602	1	G	core_nonrep	11	1	1
Rue3-1-31	3	17639173	17639174	1	T	core_nonrep	10	0.9	1
Rue3-1-31	3	17640169	17640170	1	T	core_nonrep	13	1	1
Rue3-1-31	3	17644964	17644965	2	TT	core_nonrep	9	0.875	1
Rue3-1-31	3	17645220	17645221	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	3	17645314	17645315	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	17652711	17652712	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	17653298	17653299	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	17659760	17659761	1	T	core_nonrep	10	1	1
Rue3-1-31	3	17672962	17672963	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	17675169	17675170	1	C	core_nonrep	13	0.923077	1
Rue3-1-31	3	17680314	17680315	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	17685122	17685123	1	T	core_nonrep	12	1	1
Rue3-1-31	3	17687900	17687901	1	A	core_nonrep	9	1	1
Rue3-1-31	3	17700996	17700997	1	T	core_nonrep	8	1	1
Rue3-1-31	3	17701036	17701037	2	TC	core_nonrep	9	0.888889	1
Rue3-1-31	3	17708608	17708609	1	A	core_nonrep	20	0.952381	1
Rue3-1-31	3	17726794	17726795	1	A	core_nonrep	8	0.7	1
Rue3-1-31	3	17726912	17726913	2	AA	core_nonrep	10	0.692308	1
Rue3-1-31	3	17735349	17735350	1	A	nonrep	3	1	1
Rue3-1-31	3	17744730	17744731	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17751358	17751359	2	TT	nonrep	5	0.714286	1
Rue3-1-31	3	17751366	17751367	1	A	core_nonrep	6	1	1
Rue3-1-31	3	17760655	17760656	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	17765767	17765768	1	A	core_nonrep	9	1	1
Rue3-1-31	3	17782031	17782032	2	TT	core_nonrep	9	0.75	1
Rue3-1-31	3	17783917	17783918	1	C	core_nonrep	12	1	1
Rue3-1-31	3	17789126	17789127	1	A	core_nonrep	9	1	1
Rue3-1-31	3	17793756	17793757	1	A	nonrep	3	0.75	1
Rue3-1-31	3	17801147	17801148	2	AC	core_nonrep	8	1	1
Rue3-1-31	3	17801973	17801974	1	T	nonrep	5	0.833333	1
Rue3-1-31	3	17812090	17812091	2	CT	core_nonrep	10	0.909091	1
Rue3-1-31	3	17819612	17819613	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	3	17829849	17829850	2	TT	core_nonrep	10	1	1
Rue3-1-31	3	17830019	17830020	2	TT	core_nonrep	5	0.75	1
Rue3-1-31	3	17851115	17851116	1	A	core_nonrep	3	1	1
Rue3-1-31	3	17857490	17857491	3	GTC	core_nonrep	3	1	1
Rue3-1-31	3	17859582	17859583	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17859613	17859614	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	17877136	17877137	1	G	core_nonrep	21	0.947368	1
Rue3-1-31	3	17885332	17885333	1	C	core_nonrep	7	1	1
Rue3-1-31	3	17886741	17886742	1	A	nonrep	3	1	1
Rue3-1-31	3	17893007	17893008	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	17899121	17899122	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	17901079	17901080	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	17901723	17901724	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17910610	17910611	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17915414	17915415	2	AC	core_nonrep	12	0.923077	1
Rue3-1-31	3	17916715	17916716	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	17919341	17919342	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17921752	17921753	1	T	core_nonrep	9	1	1.1
Rue3-1-31	3	17921773	17921774	1	T	core_nonrep	8	1	1
Rue3-1-31	3	17923913	17923914	1	G	core_nonrep	4	1	1
Rue3-1-31	3	17924932	17924933	2	TA	core_nonrep	4	1	1
Rue3-1-31	3	17926140	17926141	1	C	core_nonrep	4	1	1
Rue3-1-31	3	17926215	17926216	1	A	core_nonrep	3	1	1
Rue3-1-31	3	17927780	17927781	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	17929453	17929454	1	T	nonrep	6	0.75	1
Rue3-1-31	3	17934113	17934114	1	T	core_nonrep	24	1	1
Rue3-1-31	3	17934626	17934627	1	A	core_nonrep	4	1	1
Rue3-1-31	3	17958745	17958746	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	17961292	17961293	1	T	core_nonrep	14	1	1
Rue3-1-31	3	17961305	17961306	1	T	core_nonrep	12	0.769231	1
Rue3-1-31	3	17962434	17962435	1	C	nonrep	9	0.75	1
Rue3-1-31	3	17962507	17962508	1	C	core_nonrep	7	1	1
Rue3-1-31	3	17962918	17962919	1	T	core_nonrep	11	1	1
Rue3-1-31	3	17963285	17963286	1	T	core_nonrep	12	1	1
Rue3-1-31	3	17963614	17963615	1	C	core_nonrep	14	1	1
Rue3-1-31	3	17968005	17968006	1	C	core_nonrep	5	1	1
Rue3-1-31	3	17968142	17968143	1	A	core_nonrep	5	1	1
Rue3-1-31	3	17968795	17968796	1	T	core_nonrep	6	1	1
Rue3-1-31	3	17971494	17971495	1	C	core_nonrep	13	0.75	1
Rue3-1-31	3	17971726	17971727	2	CC	core_nonrep	8	1	1
Rue3-1-31	3	17973927	17973928	1	T	core_nonrep	3	1	1
Rue3-1-31	3	17976600	17976601	1	T	core_nonrep	7	1	1
Rue3-1-31	3	17977947	17977948	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	3	17977949	17977950	1	C	core_nonrep	13	1	1
Rue3-1-31	3	17985696	17985697	1	T	core_nonrep	12	1	1
Rue3-1-31	3	18000590	18000591	1	G	core_nonrep	16	1	1
Rue3-1-31	3	18009786	18009787	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18010079	18010080	1	G	core_nonrep	4	0.8	1
Rue3-1-31	3	18010399	18010400	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18011562	18011563	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18011978	18011979	2	TT	core_nonrep	11	1	1
Rue3-1-31	3	18014655	18014656	1	T	core_nonrep	10	1	1
Rue3-1-31	3	18014741	18014742	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	18014938	18014939	1	C	core_nonrep	13	1	1
Rue3-1-31	3	18025095	18025096	1	A	core_nonrep	7	1	1
Rue3-1-31	3	18025815	18025816	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	18026576	18026577	1	C	core_nonrep	7	0.875	1
Rue3-1-31	3	18029719	18029720	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	18034651	18034652	2	CC	core_nonrep	5	0.833333	1
Rue3-1-31	3	18038532	18038533	1	T	nonrep	3	0.75	1
Rue3-1-31	3	18040947	18040948	1	G	core_nonrep	11	0.9	1
Rue3-1-31	3	18041255	18041256	1	C	core_nonrep	4	1	1
Rue3-1-31	3	18053816	18053817	1	T	core_nonrep	13	1	1
Rue3-1-31	3	18055643	18055644	1	A	core_nonrep	7	1	1
Rue3-1-31	3	18055771	18055772	1	T	core_nonrep	3	1	1
Rue3-1-31	3	18060317	18060318	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	18063333	18063334	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18064093	18064094	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	18064418	18064419	1	G	core_nonrep	8	0.75	1
Rue3-1-31	3	18069801	18069802	1	T	core_nonrep	6	1	1
Rue3-1-31	3	18072285	18072286	1	T	core_nonrep	3	1	1
Rue3-1-31	3	18077659	18077660	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	18080152	18080153	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18084214	18084215	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18085766	18085767	1	C	core_nonrep	6	1	1
Rue3-1-31	3	18087641	18087642	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	18087643	18087644	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	18087644	18087645	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18096364	18096365	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18100698	18100699	2	CA	nonrep	10	0.909091	1
Rue3-1-31	3	18113142	18113143	2	AG	core_nonrep	9	1	1
Rue3-1-31	3	18118328	18118329	1	G	core_nonrep	9	1	1
Rue3-1-31	3	18118732	18118733	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	3	18118733	18118734	2	AT	core_nonrep	6	0.714286	1
Rue3-1-31	3	18119504	18119505	1	C	core_nonrep	4	1	1
Rue3-1-31	3	18147759	18147760	1	A	nonrep	3	1	1
Rue3-1-31	3	18147971	18147972	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18152120	18152121	2	AA	core_nonrep	10	1	1
Rue3-1-31	3	18152167	18152168	1	G	core_nonrep	5	1	1
Rue3-1-31	3	18152951	18152952	1	T	core_nonrep	11	1	1
Rue3-1-31	3	18153398	18153399	1	T	core_nonrep	6	0.75	1
Rue3-1-31	3	18172412	18172413	1	C	core_nonrep	15	1	1
Rue3-1-31	3	18174258	18174259	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	18179667	18179668	1	A	core_nonrep	8	1	1
Rue3-1-31	3	18184095	18184096	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18187531	18187532	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18187782	18187783	1	T	core_nonrep	6	1	1
Rue3-1-31	3	18187783	18187784	1	A	core_nonrep	6	1	1
Rue3-1-31	3	18188701	18188702	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	18190784	18190785	1	G	core_nonrep	5	1	1
Rue3-1-31	3	18193251	18193252	1	T	core_nonrep	13	1	1
Rue3-1-31	3	18202864	18202865	1	T	core_nonrep	11	1	1
Rue3-1-31	3	18203440	18203441	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	18215502	18215503	1	G	core_nonrep	8	0.875	1
Rue3-1-31	3	18215914	18215915	3	AAT	core_nonrep	9	0.7	1
Rue3-1-31	3	18216182	18216183	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	18217705	18217706	1	G	core_nonrep	4	1	1
Rue3-1-31	3	18219767	18219768	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	18219768	18219769	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	18221657	18221658	1	G	core_nonrep	4	1	1
Rue3-1-31	3	18229264	18229265	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18231015	18231016	1	A	core_nonrep	9	1	1
Rue3-1-31	3	18232124	18232125	1	C	core_nonrep	6	0.8	1
Rue3-1-31	3	18242937	18242938	1	A	core_nonrep	16	1	1
Rue3-1-31	3	18256139	18256140	1	A	core_nonrep	7	1	1
Rue3-1-31	3	18309918	18309919	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	18312551	18312552	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	18336289	18336290	1	T	core_nonrep	3	1	1
Rue3-1-31	3	18377985	18377986	1	T	core_nonrep	13	0.846154	1
Rue3-1-31	3	18420277	18420278	1	T	core_nonrep	7	1	1
Rue3-1-31	3	18420313	18420314	1	G	core_nonrep	8	0.875	1
Rue3-1-31	3	18420315	18420316	1	A	core_nonrep	8	1	1
Rue3-1-31	3	18442036	18442037	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18448089	18448090	1	A	core_nonrep	4	1	1
Rue3-1-31	3	18463709	18463710	3	ATG	core_nonrep	6	0.857143	1
Rue3-1-31	3	18465589	18465590	1	A	core_nonrep	5	1	1
Rue3-1-31	3	18467798	18467799	1	T	core_nonrep	3	1	1
Rue3-1-31	3	18467866	18467867	1	T	nonrep	4	1	1
Rue3-1-31	3	18468718	18468719	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18469954	18469955	1	G	core_nonrep	8	1	1
Rue3-1-31	3	18470384	18470385	1	T	core_nonrep	7	1	1
Rue3-1-31	3	18470657	18470658	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	18470658	18470659	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	3	18474243	18474244	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18477317	18477318	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	18482340	18482341	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	18488406	18488407	1	T	core_nonrep	8	1	1
Rue3-1-31	3	18489551	18489552	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18494365	18494366	2	AA	core_nonrep	13	0.916667	1
Rue3-1-31	3	18498399	18498400	1	A	core_nonrep	5	1	1
Rue3-1-31	3	18513681	18513682	1	T	core_nonrep	6	1	1
Rue3-1-31	3	18515147	18515148	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	3	18515997	18515998	1	G	core_nonrep	12	0.9	1
Rue3-1-31	3	18522459	18522460	1	T	core_nonrep	3	1	1
Rue3-1-31	3	18527255	18527256	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	3	18528913	18528914	1	G	core_nonrep	6	1	1
Rue3-1-31	3	18530162	18530163	1	T	nonrep	3	1	1
Rue3-1-31	3	18530995	18530996	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	18532201	18532202	1	A	core_nonrep	12	1	1
Rue3-1-31	3	18532202	18532203	2	TT	core_nonrep	12	0.833333	1
Rue3-1-31	3	18534912	18534913	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	3	18539866	18539867	1	A	core_nonrep	6	1	1
Rue3-1-31	3	18540300	18540301	1	T	core_nonrep	6	1	1
Rue3-1-31	3	18540686	18540687	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	18542570	18542571	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	18543339	18543340	1	C	core_nonrep	5	0.75	1
Rue3-1-31	3	18543470	18543471	2	AA	core_nonrep	7	0.714286	1
Rue3-1-31	3	18558106	18558107	1	A	core_nonrep	10	1	1
Rue3-1-31	3	18625272	18625273	1	G	core_nonrep	19	1	1
Rue3-1-31	3	18626742	18626743	1	G	core_nonrep	8	0.777778	1
Rue3-1-31	3	18634200	18634201	1	G	core_nonrep	9	1	1
Rue3-1-31	3	18694749	18694750	1	C	core_nonrep	11	0.9	1
Rue3-1-31	3	18694772	18694773	1	C	core_nonrep	10	1	1
Rue3-1-31	3	18726642	18726643	1	T	core_nonrep	13	0.928571	1
Rue3-1-31	3	18736048	18736049	1	T	core_nonrep	10	1	1
Rue3-1-31	3	18736512	18736513	1	G	nonrep	3	0.75	1.5
Rue3-1-31	3	18741924	18741925	1	T	nonrep	4	0.8	1
Rue3-1-31	3	18742834	18742835	1	A	core_nonrep	9	1	1
Rue3-1-31	3	18753087	18753088	1	A	core_nonrep	6	1	1
Rue3-1-31	3	18753484	18753485	1	G	core_nonrep	10	1	1
Rue3-1-31	3	18753749	18753750	1	G	core_nonrep	13	0.916667	1
Rue3-1-31	3	18755211	18755212	1	G	core_nonrep	4	1	1
Rue3-1-31	3	18756004	18756005	1	C	core_nonrep	8	0.875	1
Rue3-1-31	3	18756082	18756083	1	G	core_nonrep	22	0.695652	1
Rue3-1-31	3	18756085	18756086	1	G	core_nonrep	24	0.92	1
Rue3-1-31	3	18763615	18763616	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	18764321	18764322	1	A	core_nonrep	4	1	1
Rue3-1-31	3	18769367	18769368	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18770026	18770027	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18770250	18770251	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18780622	18780623	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18781698	18781699	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18782013	18782014	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	18791658	18791659	1	T	core_nonrep	5	1	1
Rue3-1-31	3	18798573	18798574	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	18800400	18800401	1	A	core_nonrep	4	1	1
Rue3-1-31	3	18808926	18808927	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	18810627	18810628	1	A	nonrep	4	0.8	1
Rue3-1-31	3	18832883	18832884	2	AG	nonrep	3	0.75	1
Rue3-1-31	3	18848671	18848672	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18848806	18848807	1	G	core_nonrep	5	1	1
Rue3-1-31	3	18850873	18850874	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18851672	18851673	1	T	core_nonrep	9	1	1
Rue3-1-31	3	18851748	18851749	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18851749	18851750	1	G	core_nonrep	3	1	1
Rue3-1-31	3	18864450	18864451	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	3	18876502	18876503	1	A	core_nonrep	3	1	1
Rue3-1-31	3	18885780	18885781	1	G	nonrep	3	1	1
Rue3-1-31	3	18887588	18887589	1	A	core_nonrep	8	1	1
Rue3-1-31	3	18889493	18889494	1	A	core_nonrep	5	1	1
Rue3-1-31	3	18901876	18901877	1	G	core_nonrep	4	1	1
Rue3-1-31	3	18905662	18905663	1	T	core_nonrep	8	1	1
Rue3-1-31	3	18905688	18905689	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	18905689	18905690	1	G	core_nonrep	5	1	1
Rue3-1-31	3	18906747	18906748	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	18910051	18910052	1	A	core_nonrep	12	1	1
Rue3-1-31	3	18910835	18910836	1	T	core_nonrep	7	1	1
Rue3-1-31	3	18911290	18911291	1	A	core_nonrep	9	1	1
Rue3-1-31	3	18920374	18920375	1	A	core_nonrep	11	1	1
Rue3-1-31	3	18921682	18921683	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	18923440	18923441	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	18929085	18929086	1	C	core_nonrep	7	1	1
Rue3-1-31	3	18930421	18930422	1	A	core_nonrep	7	1	1
Rue3-1-31	3	18930646	18930647	1	T	core_nonrep	7	1	1
Rue3-1-31	3	18932231	18932232	1	A	core_nonrep	4	1	1
Rue3-1-31	3	18935091	18935092	1	A	nonrep	3	0.75	1
Rue3-1-31	3	18937798	18937799	1	A	nonrep	3	1	1
Rue3-1-31	3	18940203	18940204	1	C	core_nonrep	6	1	1
Rue3-1-31	3	18942758	18942759	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	18946593	18946594	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	3	18953376	18953377	1	A	nonrep	4	0.8	1
Rue3-1-31	3	18960061	18960062	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18964839	18964840	1	A	core_nonrep	10	1	1
Rue3-1-31	3	18975332	18975333	2	CT	core_nonrep	5	1	1
Rue3-1-31	3	18976667	18976668	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	18976739	18976740	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	3	18987636	18987637	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	18987637	18987638	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	18988928	18988929	1	A	core_nonrep	5	1	1
Rue3-1-31	3	18993678	18993679	1	A	core_nonrep	4	1	1
Rue3-1-31	3	18993812	18993813	1	T	core_nonrep	4	1	1
Rue3-1-31	3	18996219	18996220	1	G	core_nonrep	18	1	1
Rue3-1-31	3	18996221	18996222	1	A	core_nonrep	19	1	1
Rue3-1-31	3	19001668	19001669	1	A	core_nonrep	11	1	1
Rue3-1-31	3	19002355	19002356	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	19002731	19002732	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	3	19008269	19008270	2	TT	core_nonrep	6	0.714286	1
Rue3-1-31	3	19019546	19019547	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19038802	19038803	2	TG	core_nonrep	10	1	1
Rue3-1-31	3	19038944	19038945	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19041759	19041760	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19044604	19044605	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	3	19047880	19047881	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19048120	19048121	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	19058040	19058041	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	19064306	19064307	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	3	19064333	19064334	1	A	core_nonrep	6	1	1
Rue3-1-31	3	19064754	19064755	1	A	core_nonrep	9	1	1
Rue3-1-31	3	19064879	19064880	1	T	core_nonrep	10	0.8	1
Rue3-1-31	3	19066125	19066126	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	19078540	19078541	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	3	19078593	19078594	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	3	19096459	19096460	1	A	core_nonrep	13	1	1
Rue3-1-31	3	19153655	19153656	1	T	nonrep	3	0.75	1
Rue3-1-31	3	19154090	19154091	1	A	core_nonrep	7	1	1
Rue3-1-31	3	19159210	19159211	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	19169505	19169506	1	T	core_nonrep	7	1	1
Rue3-1-31	3	19175696	19175697	1	T	nonrep	3	1	1
Rue3-1-31	3	19176443	19176444	1	G	core_nonrep	6	1	1
Rue3-1-31	3	19176813	19176814	1	G	core_nonrep	9	0.75	1
Rue3-1-31	3	19177559	19177560	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19178000	19178001	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19184063	19184064	1	A	nonrep	3	0.75	1
Rue3-1-31	3	19191759	19191760	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19195948	19195949	1	T	core_nonrep	9	1	1
Rue3-1-31	3	19203098	19203099	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	19214406	19214407	1	C	core_nonrep	11	1	1
Rue3-1-31	3	19214408	19214409	1	C	core_nonrep	6	0.75	1
Rue3-1-31	3	19214420	19214421	1	C	core_nonrep	9	0.75	1
Rue3-1-31	3	19223497	19223498	1	C	core_nonrep	6	1	1
Rue3-1-31	3	19224223	19224224	1	A	core_nonrep	10	1	1
Rue3-1-31	3	19225049	19225050	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	19254133	19254134	1	T	core_nonrep	3	0.75	1.25
Rue3-1-31	3	19256213	19256214	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19260432	19260433	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	19262835	19262836	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	3	19265543	19265544	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19271182	19271183	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19275311	19275312	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19292653	19292654	2	GT	core_nonrep	4	1	1
Rue3-1-31	3	19300517	19300518	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19369238	19369239	1	T	core_nonrep	3	1	1
Rue3-1-31	3	19423680	19423681	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19424687	19424688	1	T	core_nonrep	7	0.7	1
Rue3-1-31	3	19424899	19424900	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19427290	19427291	1	G	core_nonrep	4	1	1
Rue3-1-31	3	19427803	19427804	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	19427804	19427805	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19432048	19432049	1	C	nonrep	3	0.75	1
Rue3-1-31	3	19432163	19432164	1	G	core_nonrep	6	1	1
Rue3-1-31	3	19454511	19454512	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19454638	19454639	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	19455107	19455108	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	19455211	19455212	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	3	19455673	19455674	1	T	nonrep	6	1	1
Rue3-1-31	3	19455681	19455682	1	C	core_nonrep	6	1	1
Rue3-1-31	3	19456094	19456095	1	T	core_nonrep	5	1	1
Rue3-1-31	3	19456320	19456321	1	T	core_nonrep	7	1	1
Rue3-1-31	3	19456782	19456783	2	AC	core_nonrep	8	1	1
Rue3-1-31	3	19465513	19465514	1	T	core_nonrep	3	1	1
Rue3-1-31	3	19478476	19478477	1	T	core_nonrep	4	1	1
Rue3-1-31	3	19479368	19479369	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19484913	19484914	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	19488788	19488789	1	T	nonrep	4	0.8	1
Rue3-1-31	3	19492632	19492633	2	TC	core_nonrep	9	1	1
Rue3-1-31	3	19494869	19494870	1	A	nonrep	3	1	1
Rue3-1-31	3	19511359	19511360	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	19511361	19511362	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	19512760	19512761	3	ATT	core_nonrep	11	0.6875	1
Rue3-1-31	3	19514309	19514310	1	T	core_nonrep	8	1	1
Rue3-1-31	3	19521223	19521224	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	19524780	19524781	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	19530633	19530634	3	AAA	core_nonrep	4	1	1
Rue3-1-31	3	19537944	19537945	1	A	core_nonrep	11	1	1
Rue3-1-31	3	19541478	19541479	1	G	core_nonrep	4	1	1
Rue3-1-31	3	19544353	19544354	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	19559425	19559426	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	19573688	19573689	1	T	core_nonrep	7	1	1
Rue3-1-31	3	19574383	19574384	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	19583958	19583959	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	19583959	19583960	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	19590117	19590118	1	T	core_nonrep	3	1	1
Rue3-1-31	3	19595972	19595973	2	TG	core_nonrep	11	1	1
Rue3-1-31	3	19607400	19607401	1	G	core_nonrep	3	1	1
Rue3-1-31	3	19607921	19607922	1	T	nonrep	3	0.75	1
Rue3-1-31	3	19609830	19609831	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	19612063	19612064	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19628428	19628429	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	19629679	19629680	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	19636494	19636495	1	A	core_nonrep	7	1	1
Rue3-1-31	3	19638168	19638169	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	19638257	19638258	3	AAA	core_nonrep	3	1	1
Rue3-1-31	3	19644456	19644457	1	T	core_nonrep	3	1	1
Rue3-1-31	3	19644662	19644663	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	19649652	19649653	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	19657880	19657881	1	G	core_nonrep	17	1	1
Rue3-1-31	3	19657955	19657956	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	3	19658397	19658398	1	T	core_nonrep	3	1	1
Rue3-1-31	3	19659742	19659743	1	G	core_nonrep	4	1	1
Rue3-1-31	3	19659894	19659895	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	3	19664133	19664134	1	T	core_nonrep	4	1	1
Rue3-1-31	3	19664413	19664414	1	A	nonrep	5	0.833333	1
Rue3-1-31	3	19664415	19664416	1	T	nonrep	5	0.833333	1
Rue3-1-31	3	19669351	19669352	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	19677502	19677503	1	G	core_nonrep	16	0.933333	1
Rue3-1-31	3	19677897	19677898	1	T	core_nonrep	10	1	1
Rue3-1-31	3	19680563	19680564	1	C	core_nonrep	8	1	1
Rue3-1-31	3	19680591	19680592	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19685699	19685700	1	C	core_nonrep	23	1	1
Rue3-1-31	3	19694254	19694255	1	C	core_nonrep	7	1	1
Rue3-1-31	3	19708624	19708625	2	AC	core_nonrep	3	1	1
Rue3-1-31	3	19710854	19710855	2	AT	core_nonrep	5	0.8	1
Rue3-1-31	3	19712708	19712709	1	A	core_nonrep	4	1	1
Rue3-1-31	3	19712933	19712934	1	A	core_nonrep	7	1	1
Rue3-1-31	3	19723398	19723399	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	19724113	19724114	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	3	19724810	19724811	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	3	19727083	19727084	1	T	core_nonrep	10	1	1
Rue3-1-31	3	19733003	19733004	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	19737803	19737804	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	19739768	19739769	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19742894	19742895	1	A	core_nonrep	4	1	1
Rue3-1-31	3	19752339	19752340	1	A	core_nonrep	4	1	1
Rue3-1-31	3	19752408	19752409	1	C	core_nonrep	4	1	1
Rue3-1-31	3	19760665	19760666	1	T	core_nonrep	11	1	1
Rue3-1-31	3	19774172	19774173	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19780661	19780662	1	A	core_nonrep	19	0.941176	1
Rue3-1-31	3	19799990	19799991	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	19808900	19808901	1	G	core_nonrep	7	1	1
Rue3-1-31	3	19814675	19814676	1	A	core_nonrep	9	0.8	1
Rue3-1-31	3	19814812	19814813	1	A	core_nonrep	7	1	1
Rue3-1-31	3	19814828	19814829	1	T	core_nonrep	7	1	1
Rue3-1-31	3	19817471	19817472	1	G	core_nonrep	7	1	1
Rue3-1-31	3	19820851	19820852	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	19826079	19826080	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	19827705	19827706	1	C	core_nonrep	7	0.7	1
Rue3-1-31	3	19827706	19827707	2	TT	core_nonrep	7	0.777778	1
Rue3-1-31	3	19833728	19833729	1	A	core_nonrep	8	1	1
Rue3-1-31	3	19837012	19837013	1	T	core_nonrep	10	1	1
Rue3-1-31	3	19843119	19843120	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	19848165	19848166	1	A	core_nonrep	11	1	1
Rue3-1-31	3	19854538	19854539	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	19854570	19854571	1	A	core_nonrep	4	1	1
Rue3-1-31	3	19856959	19856960	1	T	nonrep	3	0.75	1
Rue3-1-31	3	19857637	19857638	1	G	core_nonrep	9	1	1
Rue3-1-31	3	19857638	19857639	1	A	core_nonrep	9	1	1
Rue3-1-31	3	19861033	19861034	1	A	core_nonrep	8	1	1
Rue3-1-31	3	19861194	19861195	1	A	core_nonrep	6	1	1
Rue3-1-31	3	19861435	19861436	3	AAA	core_nonrep	4	0.8	1
Rue3-1-31	3	19862128	19862129	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19889297	19889298	1	A	core_nonrep	9	1	1
Rue3-1-31	3	19890500	19890501	2	AG	core_nonrep	5	0.8	1
Rue3-1-31	3	19896940	19896941	1	C	core_nonrep	5	0.75	1
Rue3-1-31	3	19897566	19897567	1	A	core_nonrep	3	1	1
Rue3-1-31	3	19899924	19899925	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	19901924	19901925	1	G	core_nonrep	5	1	1
Rue3-1-31	3	19902267	19902268	3	ATC	core_nonrep	12	0.75	1
Rue3-1-31	3	19907539	19907540	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	19907689	19907690	1	T	core_nonrep	6	1	1
Rue3-1-31	3	19909750	19909751	1	G	core_nonrep	5	1	1
Rue3-1-31	3	19913558	19913559	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19914115	19914116	2	AT	core_nonrep	5	1	1
Rue3-1-31	3	19914205	19914206	1	T	core_nonrep	15	1	1
Rue3-1-31	3	19922448	19922449	1	T	nonrep	3	0.75	1
Rue3-1-31	3	19924443	19924444	1	A	core_nonrep	7	1	1
Rue3-1-31	3	19924545	19924546	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	19934152	19934153	1	C	core_nonrep	4	0.8	1
Rue3-1-31	3	19934187	19934188	1	A	nonrep	3	1	1
Rue3-1-31	3	19938952	19938953	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19946437	19946438	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	19950770	19950771	1	A	core_nonrep	6	1	1
Rue3-1-31	3	19952042	19952043	1	A	core_nonrep	8	1	1
Rue3-1-31	3	19954676	19954677	1	C	core_nonrep	9	1	1
Rue3-1-31	3	19955063	19955064	1	A	core_nonrep	5	1	1
Rue3-1-31	3	19964592	19964593	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	19967076	19967077	1	A	core_nonrep	3	1	1
Rue3-1-31	3	20003951	20003952	1	T	core_nonrep	6	1	1
Rue3-1-31	3	20006827	20006828	1	C	core_nonrep	15	1	1
Rue3-1-31	3	20007730	20007731	1	A	core_nonrep	8	0.875	1
Rue3-1-31	3	20010052	20010053	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	20010242	20010243	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	20010585	20010586	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	3	20011366	20011367	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20012098	20012099	1	T	core_nonrep	8	0.8	1
Rue3-1-31	3	20025633	20025634	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20026695	20026696	1	C	core_nonrep	6	1	1
Rue3-1-31	3	20027764	20027765	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	20029342	20029343	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20041012	20041013	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20043303	20043304	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	3	20043397	20043398	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20043515	20043516	1	C	core_nonrep	6	1	1
Rue3-1-31	3	20044116	20044117	1	A	core_nonrep	10	1	1
Rue3-1-31	3	20044162	20044163	1	T	nonrep	3	1	1
Rue3-1-31	3	20044492	20044493	1	A	core_nonrep	10	0.7	1
Rue3-1-31	3	20048163	20048164	1	A	core_nonrep	7	1	1
Rue3-1-31	3	20056066	20056067	1	C	nonrep	4	0.8	1
Rue3-1-31	3	20059575	20059576	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20090922	20090923	1	A	core_nonrep	10	1	1
Rue3-1-31	3	20099946	20099947	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20100189	20100190	1	A	core_nonrep	11	1	1
Rue3-1-31	3	20100827	20100828	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20101541	20101542	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	20101547	20101548	1	C	core_nonrep	4	1	1
Rue3-1-31	3	20102305	20102306	1	C	core_nonrep	5	1	1
Rue3-1-31	3	20103108	20103109	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	20115122	20115123	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	20116945	20116946	1	G	core_nonrep	7	1	1
Rue3-1-31	3	20118223	20118224	1	G	core_nonrep	4	1	1
Rue3-1-31	3	20118271	20118272	2	AC	core_nonrep	7	1	1
Rue3-1-31	3	20118432	20118433	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20118433	20118434	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	20118434	20118435	1	A	core_nonrep	7	1	1
Rue3-1-31	3	20118765	20118766	1	G	core_nonrep	6	1	1
Rue3-1-31	3	20118766	20118767	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20118853	20118854	1	C	core_nonrep	9	0.818182	1
Rue3-1-31	3	20118880	20118881	1	T	core_nonrep	7	0.714286	1
Rue3-1-31	3	20127554	20127555	1	T	nonrep	5	0.714286	1
Rue3-1-31	3	20139159	20139160	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20144606	20144607	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	20147691	20147692	3	AGA	core_nonrep	8	1	1
Rue3-1-31	3	20157366	20157367	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20162578	20162579	2	TA	core_nonrep	3	1	1
Rue3-1-31	3	20169598	20169599	2	TA	core_nonrep	6	1	1
Rue3-1-31	3	20169962	20169963	1	T	core_nonrep	11	1	1
Rue3-1-31	3	20169963	20169964	1	A	core_nonrep	12	1	1
Rue3-1-31	3	20171097	20171098	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20204954	20204955	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	3	20207891	20207892	1	C	core_nonrep	14	1	1
Rue3-1-31	3	20207894	20207895	1	A	core_nonrep	15	1	1
Rue3-1-31	3	20230130	20230131	3	TAG	core_nonrep	10	0.769231	1
Rue3-1-31	3	20230825	20230826	1	C	core_nonrep	9	1	1
Rue3-1-31	3	20235635	20235636	1	A	core_nonrep	8	0.8	1
Rue3-1-31	3	20246382	20246383	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	20255405	20255406	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20255409	20255410	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20267398	20267399	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	3	20268796	20268797	2	AG	core_nonrep	6	0.75	1
Rue3-1-31	3	20269121	20269122	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	20269782	20269783	1	G	core_nonrep	6	1	1
Rue3-1-31	3	20271589	20271590	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	20271823	20271824	1	A	core_nonrep	6	1	1
Rue3-1-31	3	20272087	20272088	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20273915	20273916	1	A	core_nonrep	18	1	1
Rue3-1-31	3	20277715	20277716	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20279581	20279582	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	20279618	20279619	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20280103	20280104	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	20297814	20297815	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20302815	20302816	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	20303364	20303365	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20303392	20303393	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20306377	20306378	1	A	core_nonrep	3	1	1
Rue3-1-31	3	20310820	20310821	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	20315410	20315411	1	G	core_nonrep	5	1	1
Rue3-1-31	3	20328341	20328342	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	20352438	20352439	1	A	core_nonrep	7	1	1
Rue3-1-31	3	20355600	20355601	1	G	core_nonrep	5	0.8	1
Rue3-1-31	3	20355673	20355674	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	20357420	20357421	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	3	20366486	20366487	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	3	20368130	20368131	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20371842	20371843	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20374375	20374376	1	T	core_nonrep	10	1	1
Rue3-1-31	3	20386715	20386716	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20386868	20386869	1	T	nonrep	3	0.75	1
Rue3-1-31	3	20388199	20388200	1	G	core_nonrep	3	1	1
Rue3-1-31	3	20388578	20388579	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20391003	20391004	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20392462	20392463	1	C	core_nonrep	8	1	1
Rue3-1-31	3	20397510	20397511	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	20397515	20397516	1	C	core_nonrep	4	1	1
Rue3-1-31	3	20397596	20397597	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	20399292	20399293	1	G	nonrep	3	0.75	1
Rue3-1-31	3	20400886	20400887	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	3	20401013	20401014	1	T	core_nonrep	11	0.9	1
Rue3-1-31	3	20401950	20401951	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	20402883	20402884	1	T	core_nonrep	9	1	1
Rue3-1-31	3	20402996	20402997	1	C	core_nonrep	3	0.75	1
Rue3-1-31	3	20403264	20403265	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	20404999	20405000	1	C	core_nonrep	4	1	1
Rue3-1-31	3	20405179	20405180	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20405701	20405702	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	3	20407181	20407182	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20408127	20408128	1	T	core_nonrep	8	1	1
Rue3-1-31	3	20408651	20408652	1	A	core_nonrep	9	0.875	1
Rue3-1-31	3	20418822	20418823	1	T	nonrep	3	1	1
Rue3-1-31	3	20424593	20424594	1	A	core_nonrep	6	1	1
Rue3-1-31	3	20430945	20430946	1	T	core_nonrep	6	1	1
Rue3-1-31	3	20438076	20438077	2	TA	core_nonrep	4	1	1
Rue3-1-31	3	20439859	20439860	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20442854	20442855	1	A	core_nonrep	6	1	1
Rue3-1-31	3	20444576	20444577	1	C	core_nonrep	5	0.8	1
Rue3-1-31	3	20453909	20453910	1	C	core_nonrep	6	1	1
Rue3-1-31	3	20456210	20456211	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	20456213	20456214	1	C	core_nonrep	7	0.75	1
Rue3-1-31	3	20460049	20460050	1	G	nonrep	9	0.9	1
Rue3-1-31	3	20463423	20463424	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20465830	20465831	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20465834	20465835	1	A	nonrep	5	0.833333	1
Rue3-1-31	3	20468920	20468921	1	C	core_nonrep	7	1	1
Rue3-1-31	3	20469136	20469137	2	TC	core_nonrep	5	0.833333	1
Rue3-1-31	3	20470232	20470233	1	C	core_nonrep	10	0.9	1
Rue3-1-31	3	20482442	20482443	1	A	core_nonrep	3	1	1
Rue3-1-31	3	20485015	20485016	1	C	core_nonrep	5	1	1
Rue3-1-31	3	20485373	20485374	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20488377	20488378	1	C	core_nonrep	6	1	1
Rue3-1-31	3	20490269	20490270	1	A	core_nonrep	13	1	1
Rue3-1-31	3	20506788	20506789	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20508302	20508303	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	3	20513009	20513010	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	3	20538432	20538433	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20541804	20541805	1	G	core_nonrep	12	0.888889	1
Rue3-1-31	3	20554794	20554795	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20559605	20559606	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	20576929	20576930	1	T	nonrep	5	0.833333	1
Rue3-1-31	3	20600478	20600479	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20605587	20605588	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20627727	20627728	1	A	core_nonrep	3	1	1
Rue3-1-31	3	20644543	20644544	1	C	core_nonrep	6	1	1
Rue3-1-31	3	20654826	20654827	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20667443	20667444	1	G	core_nonrep	3	1	1
Rue3-1-31	3	20681936	20681937	1	A	core_nonrep	8	1	1
Rue3-1-31	3	20692471	20692472	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20693994	20693995	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	20702890	20702891	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20702962	20702963	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20703160	20703161	1	C	core_nonrep	7	1	1
Rue3-1-31	3	20703491	20703492	1	C	core_nonrep	8	1	1
Rue3-1-31	3	20715194	20715195	1	T	core_nonrep	9	0.8	1
Rue3-1-31	3	20715343	20715344	1	C	core_nonrep	4	1	1
Rue3-1-31	3	20720957	20720958	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20722673	20722674	1	T	core_nonrep	7	1	1
Rue3-1-31	3	20725913	20725914	2	TC	core_nonrep	10	1	1
Rue3-1-31	3	20727408	20727409	2	TC	core_nonrep	7	0.875	1
Rue3-1-31	3	20728210	20728211	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	3	20736531	20736532	1	G	core_nonrep	10	1	1
Rue3-1-31	3	20751037	20751038	1	G	core_nonrep	10	0.9	1
Rue3-1-31	3	20762180	20762181	1	G	nonrep	3	1	1
Rue3-1-31	3	20762324	20762325	1	G	core_nonrep	3	1	1
Rue3-1-31	3	20763993	20763994	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	3	20770810	20770811	1	T	core_nonrep	4	1	1
Rue3-1-31	3	20773055	20773056	2	AG	core_nonrep	10	1	1
Rue3-1-31	3	20773241	20773242	1	C	core_nonrep	7	1	1
Rue3-1-31	3	20774618	20774619	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	20782114	20782115	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	20790758	20790759	2	TG	core_nonrep	6	1	1
Rue3-1-31	3	20791243	20791244	1	C	nonrep	5	0.833333	1
Rue3-1-31	3	20795318	20795319	1	T	core_nonrep	10	0.875	1
Rue3-1-31	3	20797218	20797219	3	CCT	core_nonrep	5	1	1
Rue3-1-31	3	20803842	20803843	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	3	20805936	20805937	1	A	core_nonrep	11	1	1
Rue3-1-31	3	20814404	20814405	1	A	core_nonrep	6	1	1
Rue3-1-31	3	20817460	20817461	1	G	core_nonrep	9	1	1
Rue3-1-31	3	20828934	20828935	1	T	core_nonrep	12	1	1
Rue3-1-31	3	20851149	20851150	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	20851898	20851899	1	A	core_nonrep	22	1	1
Rue3-1-31	3	20852714	20852715	1	T	core_nonrep	6	1	1
Rue3-1-31	3	20852715	20852716	1	A	core_nonrep	7	1	1
Rue3-1-31	3	20859612	20859613	1	C	core_nonrep	5	0.75	1
Rue3-1-31	3	20869643	20869644	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	20883659	20883660	2	AA	core_nonrep	6	1	1
Rue3-1-31	3	20889949	20889950	1	A	core_nonrep	7	1	1
Rue3-1-31	3	20913456	20913457	1	A	core_nonrep	12	1	1
Rue3-1-31	3	20924890	20924891	1	T	core_nonrep	3	1	1
Rue3-1-31	3	20924892	20924893	1	A	core_nonrep	3	1	1
Rue3-1-31	3	20932494	20932495	1	A	core_nonrep	6	1	1
Rue3-1-31	3	20935144	20935145	2	AG	core_nonrep	8	0.8	1
Rue3-1-31	3	20939264	20939265	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	20950681	20950682	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	20961181	20961182	2	AG	core_nonrep	3	1	1
Rue3-1-31	3	20962492	20962493	1	T	core_nonrep	5	1	1
Rue3-1-31	3	20965903	20965904	2	CA	core_nonrep	3	1	1
Rue3-1-31	3	20965904	20965905	1	A	core_nonrep	5	1	1
Rue3-1-31	3	20968365	20968366	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20975576	20975577	1	C	core_nonrep	8	1	1
Rue3-1-31	3	20988311	20988312	1	A	core_nonrep	4	1	1
Rue3-1-31	3	20990403	20990404	1	T	core_nonrep	12	1	1
Rue3-1-31	3	20991746	20991747	1	A	core_nonrep	13	1	1
Rue3-1-31	3	21001029	21001030	2	TA	core_nonrep	5	1	1
Rue3-1-31	3	21001033	21001034	1	G	core_nonrep	6	1	1
Rue3-1-31	3	21008052	21008053	1	T	core_nonrep	11	1	1
Rue3-1-31	3	21012702	21012703	1	T	core_nonrep	11	0.727273	1
Rue3-1-31	3	21017865	21017866	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	21019064	21019065	1	T	core_nonrep	12	1	1
Rue3-1-31	3	21025937	21025938	1	T	core_nonrep	8	1	1
Rue3-1-31	3	21036838	21036839	1	A	core_nonrep	5	1	1
Rue3-1-31	3	21049388	21049389	1	G	core_nonrep	3	1	1
Rue3-1-31	3	21067433	21067434	3	TTT	core_nonrep	6	1	1
Rue3-1-31	3	21068494	21068495	1	T	core_nonrep	4	1	1
Rue3-1-31	3	21068643	21068644	1	T	core_nonrep	6	1	1
Rue3-1-31	3	21073577	21073578	1	C	core_nonrep	15	1	1
Rue3-1-31	3	21073845	21073846	2	AC	core_nonrep	6	1	1
Rue3-1-31	3	21076010	21076011	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	21077059	21077060	1	A	core_nonrep	5	1	1
Rue3-1-31	3	21081634	21081635	2	AA	core_nonrep	9	1	1
Rue3-1-31	3	21081635	21081636	1	C	core_nonrep	10	1	1
Rue3-1-31	3	21099812	21099813	1	T	core_nonrep	15	1	1
Rue3-1-31	3	21108592	21108593	1	T	nonrep	4	0.8	1
Rue3-1-31	3	21111618	21111619	1	A	core_nonrep	9	1	1
Rue3-1-31	3	21113839	21113840	1	A	core_nonrep	7	1	1
Rue3-1-31	3	21115944	21115945	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	3	21120648	21120649	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	21128239	21128240	1	A	core_nonrep	5	1	1
Rue3-1-31	3	21136792	21136793	1	T	core_nonrep	14	0.857143	1
Rue3-1-31	3	21146899	21146900	1	A	core_nonrep	8	0.875	1
Rue3-1-31	3	21147478	21147479	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	21149119	21149120	1	A	core_nonrep	4	1	1
Rue3-1-31	3	21152634	21152635	1	T	core_nonrep	6	1	1
Rue3-1-31	3	21155918	21155919	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21156308	21156309	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	21166955	21166956	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	21167489	21167490	1	T	core_nonrep	4	1	1
Rue3-1-31	3	21176314	21176315	1	C	core_nonrep	16	0.833333	1
Rue3-1-31	3	21179308	21179309	1	A	core_nonrep	9	1	1
Rue3-1-31	3	21199535	21199536	1	G	nonrep	5	1	1
Rue3-1-31	3	21201585	21201586	1	A	core_nonrep	4	1	1
Rue3-1-31	3	21202157	21202158	1	G	nonrep	6	1	1
Rue3-1-31	3	21203750	21203751	1	T	core_nonrep	3	1	1
Rue3-1-31	3	21203751	21203752	1	A	core_nonrep	3	1	1
Rue3-1-31	3	21222459	21222460	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	21228445	21228446	1	T	core_nonrep	9	1	1
Rue3-1-31	3	21229074	21229075	1	C	core_nonrep	4	1	1
Rue3-1-31	3	21237092	21237093	1	G	core_nonrep	14	1	1
Rue3-1-31	3	21240632	21240633	1	A	nonrep	3	0.75	1
Rue3-1-31	3	21248298	21248299	1	T	core_nonrep	13	1	1
Rue3-1-31	3	21262328	21262329	1	A	core_nonrep	5	0.75	1
Rue3-1-31	3	21263277	21263278	1	A	core_nonrep	8	1	1
Rue3-1-31	3	21263498	21263499	1	T	core_nonrep	10	0.8	1
Rue3-1-31	3	21270332	21270333	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	3	21276333	21276334	1	T	core_nonrep	20	0.833333	1
Rue3-1-31	3	21287478	21287479	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21296177	21296178	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	21297072	21297073	1	C	core_nonrep	4	1	1
Rue3-1-31	3	21305972	21305973	1	C	core_nonrep	5	1	1
Rue3-1-31	3	21316536	21316537	1	C	core_nonrep	5	1	1
Rue3-1-31	3	21317478	21317479	1	G	core_nonrep	6	1	1
Rue3-1-31	3	21317582	21317583	1	T	core_nonrep	3	1	1
Rue3-1-31	3	21319281	21319282	1	A	core_nonrep	12	1	1
Rue3-1-31	3	21320715	21320716	1	G	core_nonrep	8	1	1
Rue3-1-31	3	21325314	21325315	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	21325337	21325338	1	C	core_nonrep	8	1	1
Rue3-1-31	3	21327622	21327623	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	3	21328232	21328233	1	A	core_nonrep	7	1	1
Rue3-1-31	3	21328958	21328959	2	GG	core_nonrep	10	0.818182	1
Rue3-1-31	3	21329338	21329339	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	21331301	21331302	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	21333048	21333049	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	21339111	21339112	1	T	core_nonrep	4	1	1
Rue3-1-31	3	21340490	21340491	1	T	core_nonrep	7	1	1
Rue3-1-31	3	21354676	21354677	1	A	core_nonrep	3	1	1
Rue3-1-31	3	21354678	21354679	1	G	core_nonrep	3	1	1
Rue3-1-31	3	21358765	21358766	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	21360071	21360072	1	T	core_nonrep	7	0.75	1
Rue3-1-31	3	21364302	21364303	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	21381461	21381462	1	T	core_nonrep	4	0.8	1
Rue3-1-31	3	21387683	21387684	1	T	core_nonrep	3	1	1
Rue3-1-31	3	21388487	21388488	1	A	core_nonrep	3	1	1
Rue3-1-31	3	21390343	21390344	1	T	core_nonrep	4	1	1
Rue3-1-31	3	21398336	21398337	1	T	nonrep	4	0.8	1
Rue3-1-31	3	21403482	21403483	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	21406512	21406513	2	TT	core_nonrep	3	1	1
Rue3-1-31	3	21422807	21422808	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21437303	21437304	1	A	core_nonrep	7	1	1
Rue3-1-31	3	21441093	21441094	1	C	core_nonrep	4	0.75	1
Rue3-1-31	3	21461004	21461005	1	T	core_nonrep	6	1	1
Rue3-1-31	3	21461246	21461247	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	3	21463249	21463250	2	TA	core_nonrep	8	1	1
Rue3-1-31	3	21469709	21469710	1	T	core_nonrep	4	1	1
Rue3-1-31	3	21473874	21473875	2	CA	nonrep	9	0.818182	1
Rue3-1-31	3	21482323	21482324	3	TCT	core_nonrep	12	0.6875	1
Rue3-1-31	3	21488348	21488349	1	C	core_nonrep	17	1	1
Rue3-1-31	3	21492718	21492719	1	G	core_nonrep	3	0.75	1
Rue3-1-31	3	21494697	21494698	1	T	core_nonrep	7	1	1
Rue3-1-31	3	21500489	21500490	1	C	core_nonrep	7	1	1
Rue3-1-31	3	21500490	21500491	1	C	core_nonrep	6	1	1
Rue3-1-31	3	21505670	21505671	1	G	core_nonrep	8	1	1
Rue3-1-31	3	21508600	21508601	1	A	core_nonrep	3	1	1
Rue3-1-31	3	21510959	21510960	1	C	core_nonrep	8	1	1
Rue3-1-31	3	21511827	21511828	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	21519820	21519821	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21554048	21554049	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	21560838	21560839	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	21561171	21561172	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	21562769	21562770	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21567777	21567778	1	A	core_nonrep	4	0.8	1
Rue3-1-31	3	21575627	21575628	1	G	core_nonrep	8	1	1
Rue3-1-31	3	21581225	21581226	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	21585929	21585930	1	A	core_nonrep	15	0.933333	1
Rue3-1-31	3	21585930	21585931	1	T	core_nonrep	16	0.933333	1
Rue3-1-31	3	21586775	21586776	2	AA	core_nonrep	4	1	1
Rue3-1-31	3	21588935	21588936	1	G	core_nonrep	7	1	1
Rue3-1-31	3	21598852	21598853	1	T	core_nonrep	6	1	1
Rue3-1-31	3	21599220	21599221	1	T	core_nonrep	6	1	1
Rue3-1-31	3	21600906	21600907	1	C	core_nonrep	11	1	1
Rue3-1-31	3	21601520	21601521	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	3	21602491	21602492	1	G	nonrep	4	1	1
Rue3-1-31	3	21613410	21613411	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21613591	21613592	3	ACC	core_nonrep	9	0.727273	1
Rue3-1-31	3	21615430	21615431	1	G	core_nonrep	12	0.8	1
Rue3-1-31	3	21628875	21628876	1	A	core_nonrep	8	1	1
Rue3-1-31	3	21633826	21633827	1	T	core_nonrep	17	0.9375	1
Rue3-1-31	3	21694620	21694621	1	A	core_nonrep	7	1	1
Rue3-1-31	3	21711603	21711604	1	C	core_nonrep	6	1	1
Rue3-1-31	3	21712457	21712458	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	3	21718693	21718694	1	G	core_nonrep	9	0.875	1
Rue3-1-31	3	21720260	21720261	1	T	core_nonrep	10	1	1
Rue3-1-31	3	21721636	21721637	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	3	21724376	21724377	2	AT	core_nonrep	12	0.916667	1
Rue3-1-31	3	21725854	21725855	1	T	core_nonrep	3	1	1
Rue3-1-31	3	21730308	21730309	1	A	core_nonrep	11	1	1
Rue3-1-31	3	21732345	21732346	1	A	core_nonrep	10	1	1
Rue3-1-31	3	21742800	21742801	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	3	21747534	21747535	1	A	core_nonrep	5	1	1
Rue3-1-31	3	21750649	21750650	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	21753190	21753191	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21769693	21769694	3	TTA	core_nonrep	7	1	1
Rue3-1-31	3	21778021	21778022	1	T	core_nonrep	10	0.75	1
Rue3-1-31	3	21778073	21778074	1	A	core_nonrep	10	0.8	1
Rue3-1-31	3	21778622	21778623	2	TT	core_nonrep	8	1	1
Rue3-1-31	3	21779295	21779296	2	AA	core_nonrep	12	0.8	1
Rue3-1-31	3	21821019	21821020	1	T	core_nonrep	5	1	1
Rue3-1-31	3	21838872	21838873	1	A	core_nonrep	6	0.75	1
Rue3-1-31	3	21841313	21841314	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	21841354	21841355	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	21842281	21842282	1	A	core_nonrep	10	0.9	1
Rue3-1-31	3	21847394	21847395	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	21857689	21857690	1	T	core_nonrep	9	1	1
Rue3-1-31	3	21869298	21869299	1	A	core_nonrep	8	1	1
Rue3-1-31	3	21874133	21874134	1	C	core_nonrep	5	1	1
Rue3-1-31	3	21874654	21874655	1	C	core_nonrep	16	0.866667	1
Rue3-1-31	3	21875083	21875084	1	A	core_nonrep	5	1	1
Rue3-1-31	3	21879870	21879871	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	3	21894803	21894804	1	A	core_nonrep	10	1	1
Rue3-1-31	3	21894804	21894805	1	T	core_nonrep	10	0.9	1
Rue3-1-31	3	21895629	21895630	2	AG	core_nonrep	14	1	1
Rue3-1-31	3	21916982	21916983	1	G	core_nonrep	15	1	1
Rue3-1-31	3	21917897	21917898	2	AT	core_nonrep	15	1	1
Rue3-1-31	3	21921721	21921722	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	21942554	21942555	1	C	core_nonrep	7	1	1
Rue3-1-31	3	21966111	21966112	1	C	core_nonrep	9	1	1
Rue3-1-31	3	21967450	21967451	3	TTT	core_nonrep	3	0.75	1
Rue3-1-31	3	22026994	22026995	1	T	core_nonrep	5	1	1
Rue3-1-31	3	22030314	22030315	1	T	core_nonrep	3	1	1
Rue3-1-31	3	22035280	22035281	1	T	core_nonrep	11	1	1.07692
Rue3-1-31	3	22053730	22053731	1	A	core_nonrep	6	1	1
Rue3-1-31	3	22054192	22054193	1	A	core_nonrep	10	1	1
Rue3-1-31	3	22056091	22056092	1	T	nonrep	6	0.75	1
Rue3-1-31	3	22056092	22056093	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	3	22056194	22056195	2	AT	core_nonrep	5	1	1
Rue3-1-31	3	22056826	22056827	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	22065902	22065903	1	A	core_nonrep	4	1	1
Rue3-1-31	3	22067845	22067846	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	3	22068255	22068256	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	3	22068520	22068521	1	T	core_nonrep	7	1	1
Rue3-1-31	3	22069528	22069529	1	T	core_nonrep	5	1	1
Rue3-1-31	3	22069909	22069910	1	C	core_nonrep	3	1	1
Rue3-1-31	3	22077730	22077731	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	22081369	22081370	1	A	core_nonrep	23	0.8	1
Rue3-1-31	3	22086877	22086878	1	C	core_nonrep	8	1	1
Rue3-1-31	3	22087216	22087217	2	CT	nonrep	4	1	1
Rue3-1-31	3	22087733	22087734	1	T	core_nonrep	9	1	1
Rue3-1-31	3	22102292	22102293	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22103717	22103718	1	T	nonrep	4	0.8	1
Rue3-1-31	3	22117122	22117123	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	3	22123598	22123599	2	TT	core_nonrep	7	1	1
Rue3-1-31	3	22127190	22127191	1	A	core_nonrep	4	1	1
Rue3-1-31	3	22127244	22127245	1	T	core_nonrep	6	1	1
Rue3-1-31	3	22132007	22132008	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	3	22133259	22133260	1	T	core_nonrep	6	1	1
Rue3-1-31	3	22133559	22133560	1	A	core_nonrep	8	0.875	1
Rue3-1-31	3	22146270	22146271	1	T	core_nonrep	10	1	1
Rue3-1-31	3	22146883	22146884	2	AC	core_nonrep	8	1	1
Rue3-1-31	3	22147569	22147570	1	T	core_nonrep	8	0.75	1
Rue3-1-31	3	22149502	22149503	1	T	core_nonrep	6	1	1
Rue3-1-31	3	22150980	22150981	1	T	core_nonrep	11	0.833333	1
Rue3-1-31	3	22156509	22156510	1	T	core_nonrep	7	1	1
Rue3-1-31	3	22161188	22161189	1	C	core_nonrep	8	1	1
Rue3-1-31	3	22168083	22168084	1	T	core_nonrep	10	0.8	1
Rue3-1-31	3	22181375	22181376	1	C	core_nonrep	3	1	1
Rue3-1-31	3	22181527	22181528	1	A	core_nonrep	3	1	1
Rue3-1-31	3	22194563	22194564	1	C	core_nonrep	14	0.8	1
Rue3-1-31	3	22199556	22199557	1	G	core_nonrep	9	0.875	1
Rue3-1-31	3	22201030	22201031	1	T	core_nonrep	7	0.75	1
Rue3-1-31	3	22209393	22209394	1	G	core_nonrep	8	0.875	1
Rue3-1-31	3	22228985	22228986	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	22257900	22257901	1	T	core_nonrep	14	1	1
Rue3-1-31	3	22268305	22268306	1	T	core_nonrep	7	1	1
Rue3-1-31	3	22268723	22268724	1	T	core_nonrep	3	1	1
Rue3-1-31	3	22284255	22284256	1	G	core_nonrep	11	1	1
Rue3-1-31	3	22292016	22292017	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	22319031	22319032	1	G	core_nonrep	11	1	1
Rue3-1-31	3	22319083	22319084	1	A	core_nonrep	22	0.869565	1
Rue3-1-31	3	22324889	22324890	1	A	core_nonrep	9	1	1
Rue3-1-31	3	22327476	22327477	1	G	core_nonrep	6	1	1
Rue3-1-31	3	22327477	22327478	1	A	core_nonrep	6	1	1
Rue3-1-31	3	22327483	22327484	1	G	core_nonrep	6	1	1
Rue3-1-31	3	22331520	22331521	2	AC	core_nonrep	4	1	1
Rue3-1-31	3	22334169	22334170	1	A	core_nonrep	13	1	1
Rue3-1-31	3	22357498	22357499	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	3	22359726	22359727	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	22359727	22359728	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	3	22360406	22360407	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22363199	22363200	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	22364009	22364010	1	A	core_nonrep	8	1	1
Rue3-1-31	3	22364019	22364020	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22380765	22380766	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	3	22393020	22393021	1	A	core_nonrep	5	1	1
Rue3-1-31	3	22405913	22405914	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	3	22409365	22409366	1	T	core_nonrep	11	1	1
Rue3-1-31	3	22413459	22413460	2	TT	core_nonrep	4	1	1
Rue3-1-31	3	22419237	22419238	1	C	core_nonrep	13	1	1
Rue3-1-31	3	22420800	22420801	1	C	core_nonrep	12	0.833333	1
Rue3-1-31	3	22420801	22420802	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	3	22424372	22424373	1	A	core_nonrep	4	1	1
Rue3-1-31	3	22434667	22434668	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	3	22438111	22438112	1	A	core_nonrep	6	1	1
Rue3-1-31	3	22438546	22438547	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	22442221	22442222	1	T	core_nonrep	6	1	1
Rue3-1-31	3	22447812	22447813	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	22450883	22450884	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22461973	22461974	1	T	core_nonrep	11	1	1
Rue3-1-31	3	22471011	22471012	1	G	core_nonrep	5	1	1
Rue3-1-31	3	22471012	22471013	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	22498930	22498931	1	A	core_nonrep	16	0.933333	1
Rue3-1-31	3	22522738	22522739	2	CT	core_nonrep	14	1	1
Rue3-1-31	3	22527803	22527804	1	N	core	5	0.8	1.33333
Rue3-1-31	3	22528380	22528381	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	3	22528657	22528658	1	T	core_nonrep	12	1	1.21429
Rue3-1-31	3	22528658	22528659	1	C	core_nonrep	12	1	1.42857
Rue3-1-31	3	22532485	22532486	2	AC	core_nonrep	7	0.7	1
Rue3-1-31	3	22549960	22549961	1	A	nonrep	3	1	1
Rue3-1-31	3	22560182	22560183	1	A	core_nonrep	10	0.8	1
Rue3-1-31	3	22567902	22567903	1	A	core_nonrep	3	1	1
Rue3-1-31	3	22572604	22572605	2	AG	core_nonrep	6	1	1.5
Rue3-1-31	3	22576290	22576291	2	CT	core_nonrep	5	1	1
Rue3-1-31	3	22588711	22588712	1	G	core_nonrep	8	0.875	1
Rue3-1-31	3	22627574	22627575	1	A	nonrep	4	1	1
Rue3-1-31	3	22627880	22627881	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	3	22632065	22632066	1	T	core_nonrep	7	0.75	1
Rue3-1-31	3	22645334	22645335	2	TG	core_nonrep	10	0.818182	1
Rue3-1-31	3	22647263	22647264	1	T	core_nonrep	7	0.875	1
Rue3-1-31	3	22655683	22655684	1	A	core_nonrep	7	1	1.11111
Rue3-1-31	3	22655871	22655872	1	A	nonrep	3	1	1
Rue3-1-31	3	22662538	22662539	1	C	core_nonrep	6	1	1
Rue3-1-31	3	22663440	22663441	2	AC	core_nonrep	4	1	1
Rue3-1-31	3	22663862	22663863	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	22667460	22667461	1	G	core_nonrep	15	1	1.04348
Rue3-1-31	3	22680845	22680846	1	A	core_nonrep	3	0.75	1
Rue3-1-31	3	22685898	22685899	1	T	nonrep	3	1	1
Rue3-1-31	3	22692363	22692364	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	3	22694710	22694711	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	3	22718303	22718304	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	22718304	22718305	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	3	22724133	22724134	1	C	nonrep	3	1	1
Rue3-1-31	3	22726648	22726649	2	AA	core_nonrep	5	1	1
Rue3-1-31	3	22726999	22727000	2	GG	nonrep	5	0.833333	1
Rue3-1-31	3	22728546	22728547	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	3	22729614	22729615	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22729617	22729618	1	A	core_nonrep	4	1	1
Rue3-1-31	3	22734803	22734804	1	A	core_nonrep	14	1	1
Rue3-1-31	3	22734980	22734981	1	A	core_nonrep	11	1	1
Rue3-1-31	3	22736123	22736124	1	A	core_nonrep	7	0.875	1
Rue3-1-31	3	22738000	22738001	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22745951	22745952	1	T	core_nonrep	12	0.833333	1
Rue3-1-31	3	22749096	22749097	1	T	core_nonrep	4	1	1
Rue3-1-31	3	22752385	22752386	1	C	core_nonrep	4	1	1
Rue3-1-31	3	22753232	22753233	1	G	core_nonrep	6	1	1
Rue3-1-31	3	22753768	22753769	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	3	22753952	22753953	1	A	core_nonrep	5	1	1
Rue3-1-31	3	22758142	22758143	2	CT	core_nonrep	4	1	1
Rue3-1-31	3	22759231	22759232	1	A	core_nonrep	5	1	1
Rue3-1-31	3	22759232	22759233	1	C	core_nonrep	5	1	1
Rue3-1-31	3	22759365	22759366	1	T	core_nonrep	3	1	1
Rue3-1-31	3	22769395	22769396	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	3	22786819	22786820	2	AC	core_nonrep	6	1	1
Rue3-1-31	3	22789479	22789480	1	C	core_nonrep	4	1	1
Rue3-1-31	3	22789792	22789793	2	TA	core_nonrep	6	0.75	1
Rue3-1-31	3	22789967	22789968	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	3	22800368	22800369	1	T	core_nonrep	8	0.875	1
Rue3-1-31	3	22801102	22801103	1	T	core_nonrep	4	0.75	1
Rue3-1-31	3	22801534	22801535	1	C	core_nonrep	7	1	1
Rue3-1-31	3	22801998	22801999	1	A	core_nonrep	10	1	1
Rue3-1-31	3	22807647	22807648	1	T	core_nonrep	9	1	1
Rue3-1-31	3	22809706	22809707	1	T	core_nonrep	5	0.8	1
Rue3-1-31	3	22809710	22809711	1	A	core_nonrep	5	1	1
Rue3-1-31	3	22815111	22815112	1	T	core_nonrep	9	1	1
Rue3-1-31	3	22824064	22824065	1	C	core_nonrep	8	0.875	1
Rue3-1-31	3	22826926	22826927	1	A	core_nonrep	11	0.875	1
Rue3-1-31	3	22876331	22876332	1	T	core_nonrep	13	1	1
Rue3-1-31	3	22921218	22921219	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	3	22939231	22939232	1	T	core_nonrep	3	1	1
Rue3-1-31	3	22946907	22946908	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	22957720	22957721	2	AA	nonrep	4	0.8	1
Rue3-1-31	3	22961764	22961765	1	A	core_nonrep	5	0.8	1
Rue3-1-31	3	22962494	22962495	1	G	core_nonrep	5	0.8	1
Rue3-1-31	3	22965107	22965108	1	T	core_nonrep	3	1	1
Rue3-1-31	3	22965108	22965109	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	22965456	22965457	1	A	core_nonrep	3	1	1
Rue3-1-31	3	22974129	22974130	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	22975856	22975857	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	22985162	22985163	2	TG	core_nonrep	5	1	1
Rue3-1-31	3	22990661	22990662	2	AA	core_nonrep	3	1	1
Rue3-1-31	3	23001775	23001776	1	T	core_nonrep	5	0.75	1
Rue3-1-31	3	23011359	23011360	1	A	core_nonrep	8	0.75	1
Rue3-1-31	3	23017967	23017968	1	C	core_nonrep	5	0.8	1
Rue3-1-31	3	23031506	23031507	1	A	core_nonrep	9	1	1
Rue3-1-31	3	23076399	23076400	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	3	23077502	23077503	1	A	core_nonrep	6	1	1
Rue3-1-31	3	23079672	23079673	1	T	core_nonrep	4	1	1
Rue3-1-31	3	23080051	23080052	1	A	nonrep	3	0.75	1
Rue3-1-31	3	23089067	23089068	2	TA	core_nonrep	6	0.714286	1
Rue3-1-31	3	23089068	23089069	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	3	23091623	23091624	1	C	core_nonrep	4	1	1
Rue3-1-31	3	23093139	23093140	1	C	core_nonrep	8	1	1
Rue3-1-31	3	23094293	23094294	1	A	core_nonrep	11	0.9	1
Rue3-1-31	3	23108996	23108997	1	G	core_nonrep	3	1	1
Rue3-1-31	3	23109225	23109226	1	A	core_nonrep	4	1	1
Rue3-1-31	3	23110399	23110400	1	A	core_nonrep	13	1	1
Rue3-1-31	3	23110577	23110578	1	T	core_nonrep	4	1	1
Rue3-1-31	3	23110773	23110774	2	GA	core_nonrep	11	0.888889	1
Rue3-1-31	3	23116759	23116760	1	T	core_nonrep	3	1	1.33333
Rue3-1-31	3	23126331	23126332	1	G	core_nonrep	16	0.928571	1.48276
Rue3-1-31	3	23127102	23127103	1	A	core_nonrep	9	1	1
Rue3-1-31	3	23165880	23165881	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	23169960	23169961	2	AA	core_nonrep	8	1	1
Rue3-1-31	3	23173297	23173298	1	C	core_nonrep	11	1	1
Rue3-1-31	3	23177413	23177414	1	A	core_nonrep	9	0.692308	1
Rue3-1-31	3	23187358	23187359	2	CA	core_nonrep	6	1	1
Rue3-1-31	3	23209284	23209285	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	3	23209305	23209306	1	T	core_nonrep	5	1	1
Rue3-1-31	3	23209327	23209328	1	G	core_nonrep	7	0.875	1
Rue3-1-31	3	23224919	23224920	1	A	core_nonrep	9	0.9	1
Rue3-1-31	3	23230502	23230503	1	C	core_nonrep	14	0.8	1
Rue3-1-31	3	23243006	23243007	1	T	core_nonrep	8	1	1
Rue3-1-31	3	23243175	23243176	2	CC	core_nonrep	4	1	1
Rue3-1-31	3	23244363	23244364	1	A	core_nonrep	6	1	1
Rue3-1-31	3	23269223	23269224	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	3	23269850	23269851	1	C	core_nonrep	20	1	1
Rue3-1-31	3	23276355	23276356	1	A	core_nonrep	6	1	1
Rue3-1-31	3	23282530	23282531	1	T	core_nonrep	10	0.9	1
Rue3-1-31	3	23290033	23290034	1	G	nonrep	3	0.75	1
Rue3-1-31	3	23292926	23292927	1	C	core_nonrep	3	1	1
Rue3-1-31	3	23293733	23293734	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	3	23293761	23293762	1	A	core_nonrep	7	0.75	1
Rue3-1-31	3	23297546	23297547	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	3	23297790	23297791	1	A	core_nonrep	9	1	1
Rue3-1-31	3	23300287	23300288	1	T	core_nonrep	3	1	1
Rue3-1-31	3	23302845	23302846	1	T	core_nonrep	7	1	1
Rue3-1-31	3	23306284	23306285	2	GG	core_nonrep	11	1	1
Rue3-1-31	3	23312578	23312579	1	T	core_nonrep	6	1	1
Rue3-1-31	3	23313377	23313378	1	T	core_nonrep	9	1	1
Rue3-1-31	3	23317265	23317266	1	A	core_nonrep	6	1	1
Rue3-1-31	3	23317266	23317267	1	G	core_nonrep	6	0.8	1
Rue3-1-31	3	23328430	23328431	1	A	core_nonrep	5	1	1
Rue3-1-31	3	23332491	23332492	1	T	core_nonrep	5	1	1
Rue3-1-31	3	23332526	23332527	1	A	core_nonrep	6	0.8	1
Rue3-1-31	3	23344521	23344522	1	A	core_nonrep	4	1	1
Rue3-1-31	3	23344688	23344689	1	T	core_nonrep	10	1	1
Rue3-1-31	3	23344689	23344690	1	T	core_nonrep	10	1	1
Rue3-1-31	3	23356326	23356327	1	T	core_nonrep	3	0.75	1
Rue3-1-31	3	23359130	23359131	1	T	core_nonrep	5	1	1
Rue3-1-31	3	23366080	23366081	2	CT	core_nonrep	11	0.909091	1
Rue3-1-31	3	23374513	23374514	1	A	core_nonrep	3	1	1
Rue3-1-31	3	23377004	23377005	1	A	core_nonrep	12	1	1
Rue3-1-31	3	23377360	23377361	1	A	core_nonrep	8	1	1
Rue3-1-31	3	23379637	23379638	1	G	core_nonrep	5	1	1
Rue3-1-31	3	23392517	23392518	1	A	core_nonrep	14	1	1
Rue3-1-31	3	23400286	23400287	1	A	core_nonrep	6	1	1
Rue3-1-31	3	23405606	23405607	1	T	core_nonrep	5	1	1
Rue3-1-31	3	23410284	23410285	1	A	core_nonrep	4	1	1
Rue3-1-31	3	23431226	23431227	1	A	core_nonrep	4	0.75	1
Rue3-1-31	3	23431554	23431555	1	A	core_nonrep	14	1	1
Rue3-1-31	3	23433357	23433358	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	3	23437842	23437843	1	A	core_nonrep	8	1	1
Rue3-1-31	3	23440151	23440152	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	3	23440369	23440370	2	TT	core_nonrep	5	1	1
Rue3-1-31	3	23447606	23447607	1	A	core_nonrep	16	0.857143	1
Rue3-1-31	3	23450539	23450540	2	CT	core_nonrep	8	0.714286	1
Rue3-1-31	3	23462104	23462105	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	3	23462845	23462846	1	T	core_nonrep	14	1	1
Rue3-1-31	4	21419	21420	1	A	core_nonrep	11	0.727273	1
Rue3-1-31	4	36912	36913	1	A	core_nonrep	7	1	1
Rue3-1-31	4	40948	40949	1	A	core_nonrep	10	1	1
Rue3-1-31	4	43890	43891	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	43999	44000	1	T	core_nonrep	5	1	1
Rue3-1-31	4	46915	46916	1	A	core_nonrep	5	1	1
Rue3-1-31	4	47094	47095	1	C	core_nonrep	7	1	1
Rue3-1-31	4	47548	47549	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	4	47573	47574	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	48546	48547	1	G	core_nonrep	7	1	1
Rue3-1-31	4	67642	67643	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	72241	72242	1	T	core_nonrep	9	0.9	1
Rue3-1-31	4	72404	72405	1	C	core_nonrep	9	1	1
Rue3-1-31	4	97847	97848	1	A	core_nonrep	5	1	1
Rue3-1-31	4	130655	130656	1	T	nonrep	4	1	1
Rue3-1-31	4	131961	131962	1	T	core_nonrep	5	1	1
Rue3-1-31	4	136060	136061	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	136172	136173	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	144501	144502	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	146137	146138	1	T	nonrep	3	1	1
Rue3-1-31	4	148065	148066	1	T	core_nonrep	6	1	1
Rue3-1-31	4	148369	148370	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	156492	156493	1	T	core_nonrep	10	1	1
Rue3-1-31	4	160355	160356	1	A	nonrep	3	0.75	1
Rue3-1-31	4	173822	173823	1	A	core_nonrep	5	1	1
Rue3-1-31	4	179613	179614	1	T	core_nonrep	14	0.785714	1
Rue3-1-31	4	181786	181787	1	A	core_nonrep	12	1	1
Rue3-1-31	4	189968	189969	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	190153	190154	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	4	191337	191338	1	C	core_nonrep	6	1	1
Rue3-1-31	4	191457	191458	1	C	core_nonrep	6	0.8	1
Rue3-1-31	4	191656	191657	1	T	nonrep	3	1	1
Rue3-1-31	4	194382	194383	1	C	core_nonrep	6	1	1
Rue3-1-31	4	203045	203046	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	212320	212321	1	C	core_nonrep	3	1	1
Rue3-1-31	4	216916	216917	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	218590	218591	1	A	core_nonrep	12	1	1
Rue3-1-31	4	227851	227852	1	T	core_nonrep	6	1	1
Rue3-1-31	4	228093	228094	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	4	229305	229306	1	C	core_nonrep	8	1	1
Rue3-1-31	4	230328	230329	1	T	core_nonrep	7	1	1
Rue3-1-31	4	230905	230906	1	T	core_nonrep	8	1	1
Rue3-1-31	4	246799	246800	1	A	core_nonrep	5	1	1
Rue3-1-31	4	251777	251778	1	A	core_nonrep	15	1	1
Rue3-1-31	4	279090	279091	1	T	core_nonrep	6	1	1
Rue3-1-31	4	286072	286073	1	T	core_nonrep	8	1	1
Rue3-1-31	4	289739	289740	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	4	295045	295046	1	A	core_nonrep	6	1	1
Rue3-1-31	4	296867	296868	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	304600	304601	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	307422	307423	1	T	core_nonrep	6	1	1
Rue3-1-31	4	312105	312106	1	A	core_nonrep	6	1	1
Rue3-1-31	4	326477	326478	1	T	core_nonrep	8	0.875	1
Rue3-1-31	4	350191	350192	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	355196	355197	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	4	355456	355457	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	4	364090	364091	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	4	368577	368578	1	C	core_nonrep	4	1	1
Rue3-1-31	4	377025	377026	1	G	core_nonrep	3	1	1
Rue3-1-31	4	379878	379879	1	C	core_nonrep	5	1	1
Rue3-1-31	4	382648	382649	1	A	core_nonrep	5	1	1
Rue3-1-31	4	389161	389162	3	TTG	core_nonrep	7	1	1
Rue3-1-31	4	405803	405804	1	T	core_nonrep	6	1	1
Rue3-1-31	4	413363	413364	1	T	core_nonrep	3	1	1
Rue3-1-31	4	417237	417238	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	419503	419504	1	C	core_nonrep	9	1	1
Rue3-1-31	4	420211	420212	1	A	core_nonrep	5	1	1
Rue3-1-31	4	420732	420733	1	T	nonrep	3	1	1
Rue3-1-31	4	420769	420770	1	T	core_nonrep	6	1	1
Rue3-1-31	4	424685	424686	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	425670	425671	1	C	core_nonrep	17	1	1
Rue3-1-31	4	431966	431967	1	T	core_nonrep	7	1	1
Rue3-1-31	4	437478	437479	1	A	core_nonrep	7	1	1
Rue3-1-31	4	438067	438068	1	C	core_nonrep	4	1	1
Rue3-1-31	4	440114	440115	3	AGA	core_nonrep	7	1	1
Rue3-1-31	4	458482	458483	1	T	core_nonrep	6	1	1
Rue3-1-31	4	465184	465185	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	4	468406	468407	1	A	core_nonrep	6	0.75	1
Rue3-1-31	4	469381	469382	1	T	core_nonrep	3	1	1
Rue3-1-31	4	476823	476824	1	T	core_nonrep	4	1	1
Rue3-1-31	4	481357	481358	1	T	core_nonrep	5	1	1
Rue3-1-31	4	482825	482826	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	483347	483348	1	A	core_nonrep	9	1	1
Rue3-1-31	4	483559	483560	2	GA	core_nonrep	7	1	1
Rue3-1-31	4	484181	484182	1	A	core_nonrep	9	1	1
Rue3-1-31	4	487217	487218	1	C	nonrep	3	1	1
Rue3-1-31	4	488318	488319	1	A	core_nonrep	6	1	1
Rue3-1-31	4	488319	488320	1	T	nonrep	6	0.857143	1
Rue3-1-31	4	493432	493433	1	A	core_nonrep	8	1	1
Rue3-1-31	4	496239	496240	2	AG	core_nonrep	4	0.8	1
Rue3-1-31	4	504523	504524	1	G	core_nonrep	4	1	1
Rue3-1-31	4	512432	512433	1	C	core_nonrep	9	1	1
Rue3-1-31	4	512813	512814	1	T	nonrep	6	0.857143	1
Rue3-1-31	4	513079	513080	1	T	core_nonrep	7	1	1
Rue3-1-31	4	513195	513196	1	T	core_nonrep	3	1	1
Rue3-1-31	4	513282	513283	1	T	core_nonrep	4	1	1
Rue3-1-31	4	516607	516608	1	A	core_nonrep	7	0.75	1
Rue3-1-31	4	521573	521574	1	T	core_nonrep	4	1	1
Rue3-1-31	4	522088	522089	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	524663	524664	1	T	core_nonrep	6	1	1
Rue3-1-31	4	527136	527137	1	G	core_nonrep	11	1	1
Rue3-1-31	4	545505	545506	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	545737	545738	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	4	545884	545885	1	A	core_nonrep	11	1	1
Rue3-1-31	4	547570	547571	1	A	core_nonrep	4	1	1
Rue3-1-31	4	548821	548822	1	A	core_nonrep	11	1	1
Rue3-1-31	4	549137	549138	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	549138	549139	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	549376	549377	1	T	core_nonrep	6	1	1
Rue3-1-31	4	549420	549421	1	G	core_nonrep	8	1	1
Rue3-1-31	4	549934	549935	3	ATG	core_nonrep	3	0.75	1
Rue3-1-31	4	550301	550302	1	T	core_nonrep	12	1	1
Rue3-1-31	4	557386	557387	1	G	core_nonrep	15	0.916667	1
Rue3-1-31	4	562972	562973	1	T	core_nonrep	4	1	1
Rue3-1-31	4	562999	563000	2	AA	core_nonrep	3	1	1
Rue3-1-31	4	564852	564853	1	A	core_nonrep	6	1	1
Rue3-1-31	4	568389	568390	1	C	core_nonrep	16	1	1
Rue3-1-31	4	571294	571295	3	ATG	core_nonrep	4	0.8	1
Rue3-1-31	4	589172	589173	1	A	core_nonrep	5	1	1
Rue3-1-31	4	595401	595402	3	CAA	core_nonrep	4	1	1
Rue3-1-31	4	596891	596892	1	T	core_nonrep	8	1	1
Rue3-1-31	4	597276	597277	1	C	nonrep	3	1	1
Rue3-1-31	4	597283	597284	1	A	core_nonrep	3	1	1
Rue3-1-31	4	600621	600622	1	G	core_nonrep	11	1	1
Rue3-1-31	4	601928	601929	2	TC	core_nonrep	8	0.777778	1
Rue3-1-31	4	603477	603478	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	607231	607232	1	A	nonrep	3	0.75	1
Rue3-1-31	4	608433	608434	2	GA	nonrep	3	0.75	1
Rue3-1-31	4	613012	613013	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	613160	613161	1	A	core_nonrep	4	1	1
Rue3-1-31	4	613911	613912	1	T	core_nonrep	4	1	1
Rue3-1-31	4	614908	614909	1	T	core_nonrep	4	1	1
Rue3-1-31	4	624908	624909	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	4	624984	624985	1	A	nonrep	3	0.75	1
Rue3-1-31	4	627521	627522	1	T	core_nonrep	8	1	1
Rue3-1-31	4	631700	631701	1	T	core_nonrep	6	1	1
Rue3-1-31	4	642085	642086	1	T	core_nonrep	14	0.916667	1
Rue3-1-31	4	642246	642247	1	T	core_nonrep	11	1	1
Rue3-1-31	4	658033	658034	1	A	core_nonrep	4	1	1
Rue3-1-31	4	669907	669908	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	673702	673703	1	T	core	5	1	1.125
Rue3-1-31	4	688062	688063	1	C	core_nonrep	7	1	1
Rue3-1-31	4	688761	688762	1	T	core_nonrep	9	1	1
Rue3-1-31	4	688818	688819	1	T	core_nonrep	9	0.833333	1
Rue3-1-31	4	689570	689571	1	A	core_nonrep	9	0.9	1
Rue3-1-31	4	699721	699722	1	A	core_nonrep	7	1	1
Rue3-1-31	4	700325	700326	1	G	nonrep	4	1	1
Rue3-1-31	4	700382	700383	1	T	nonrep	3	0.75	1
Rue3-1-31	4	701549	701550	1	T	nonrep	4	1	1
Rue3-1-31	4	705223	705224	1	C	core_nonrep	7	1	1
Rue3-1-31	4	705340	705341	1	A	core_nonrep	16	1	1
Rue3-1-31	4	708536	708537	1	T	core_nonrep	9	1	1
Rue3-1-31	4	720071	720072	1	T	core_nonrep	5	1	1
Rue3-1-31	4	723967	723968	1	T	core_nonrep	11	1	1
Rue3-1-31	4	742402	742403	1	A	core_nonrep	9	1	1
Rue3-1-31	4	745449	745450	1	A	core_nonrep	7	1	1
Rue3-1-31	4	751263	751264	1	G	core_nonrep	8	1	1
Rue3-1-31	4	761587	761588	1	C	core_nonrep	5	1	1.16667
Rue3-1-31	4	785078	785079	1	T	core_nonrep	4	1	1
Rue3-1-31	4	785349	785350	1	T	core_nonrep	8	1	1
Rue3-1-31	4	791433	791434	1	A	core_nonrep	11	0.833333	1
Rue3-1-31	4	794743	794744	1	T	core_nonrep	5	1	1
Rue3-1-31	4	795206	795207	1	A	core_nonrep	4	1	1
Rue3-1-31	4	797845	797846	1	C	nonrep	5	1	1
Rue3-1-31	4	798818	798819	1	A	core_nonrep	6	1	1
Rue3-1-31	4	801562	801563	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	801858	801859	1	T	core_nonrep	6	1	1
Rue3-1-31	4	803184	803185	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	4	803186	803187	1	C	core_nonrep	11	1	1
Rue3-1-31	4	804654	804655	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	4	807119	807120	1	G	core_nonrep	10	0.727273	1
Rue3-1-31	4	808239	808240	2	CG	core_nonrep	9	1	1
Rue3-1-31	4	813598	813599	1	T	nonrep	7	0.777778	1
Rue3-1-31	4	815948	815949	1	T	core_nonrep	7	1	1
Rue3-1-31	4	817422	817423	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	4	823433	823434	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	829708	829709	1	T	core_nonrep	3	0.75	1.2
Rue3-1-31	4	846942	846943	1	G	core_nonrep	9	1	1
Rue3-1-31	4	858105	858106	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	4	862365	862366	1	T	core_nonrep	10	0.8	1
Rue3-1-31	4	862832	862833	1	A	core_nonrep	3	1	1
Rue3-1-31	4	865607	865608	1	A	core_nonrep	6	1	1.125
Rue3-1-31	4	865843	865844	1	C	core_nonrep	3	1	1
Rue3-1-31	4	885387	885388	1	A	core_nonrep	4	1	1
Rue3-1-31	4	900329	900330	1	T	core_nonrep	5	1	1
Rue3-1-31	4	900637	900638	1	A	nonrep	6	0.75	1
Rue3-1-31	4	900757	900758	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	900955	900956	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	900956	900957	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	4	901086	901087	1	C	core_nonrep	8	1	1
Rue3-1-31	4	901682	901683	1	A	core_nonrep	8	1	1
Rue3-1-31	4	901841	901842	1	T	core_nonrep	8	1	1
Rue3-1-31	4	907602	907603	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	907942	907943	1	G	core_nonrep	6	0.8	1
Rue3-1-31	4	910721	910722	1	A	nonrep	5	0.833333	1
Rue3-1-31	4	913143	913144	1	C	core_nonrep	5	1	1
Rue3-1-31	4	914328	914329	1	A	core_nonrep	9	1	1
Rue3-1-31	4	914717	914718	1	T	core_nonrep	9	1	1
Rue3-1-31	4	915795	915796	1	A	core_nonrep	5	1	1
Rue3-1-31	4	918444	918445	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	920640	920641	1	T	core_nonrep	5	1	1
Rue3-1-31	4	923850	923851	1	C	core_nonrep	19	0.944444	1
Rue3-1-31	4	925625	925626	1	G	core_nonrep	4	1	1
Rue3-1-31	4	941623	941624	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	4	942070	942071	1	T	core_nonrep	6	1	1
Rue3-1-31	4	943333	943334	1	T	core_nonrep	10	1	1
Rue3-1-31	4	945363	945364	1	A	core_nonrep	4	1	1
Rue3-1-31	4	953820	953821	1	T	nonrep	4	0.8	1
Rue3-1-31	4	954113	954114	1	T	core_nonrep	4	1	1
Rue3-1-31	4	954668	954669	1	T	core_nonrep	6	1	1
Rue3-1-31	4	954765	954766	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	960563	960564	2	TT	core_nonrep	9	0.888889	1
Rue3-1-31	4	961595	961596	1	A	core_nonrep	8	0.7	1
Rue3-1-31	4	967349	967350	1	C	core_nonrep	11	0.916667	1
Rue3-1-31	4	971114	971115	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	972560	972561	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	4	976245	976246	1	A	core_nonrep	7	1	1
Rue3-1-31	4	977043	977044	1	T	core_nonrep	11	1	1
Rue3-1-31	4	981561	981562	2	AT	core_nonrep	21	1	1.10714
Rue3-1-31	4	984072	984073	1	C	core_nonrep	11	1	1
Rue3-1-31	4	995006	995007	1	T	core_nonrep	3	1	1
Rue3-1-31	4	995009	995010	1	C	core_nonrep	3	1	1
Rue3-1-31	4	998623	998624	1	T	core_nonrep	9	0.875	1
Rue3-1-31	4	1026304	1026305	1	T	core_nonrep	5	1	1
Rue3-1-31	4	1026326	1026327	1	T	core_nonrep	8	1	1
Rue3-1-31	4	1036762	1036763	3	ATT	core_nonrep	5	1	1
Rue3-1-31	4	1041844	1041845	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1047185	1047186	1	C	core_nonrep	4	1	1
Rue3-1-31	4	1066458	1066459	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	1067778	1067779	1	A	core_nonrep	5	1	1
Rue3-1-31	4	1069093	1069094	1	C	nonrep	5	0.833333	1
Rue3-1-31	4	1072026	1072027	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	1075514	1075515	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	1080187	1080188	1	C	core_nonrep	10	1	1
Rue3-1-31	4	1080227	1080228	1	T	core_nonrep	9	1	1
Rue3-1-31	4	1084092	1084093	1	A	core_nonrep	7	1	1
Rue3-1-31	4	1088179	1088180	1	G	core_nonrep	8	1	1
Rue3-1-31	4	1088805	1088806	2	GA	core_nonrep	5	0.833333	1
Rue3-1-31	4	1095450	1095451	1	T	core_nonrep	5	1	1
Rue3-1-31	4	1096870	1096871	1	T	core_nonrep	3	1	1
Rue3-1-31	4	1101067	1101068	1	T	nonrep	4	1	1
Rue3-1-31	4	1109597	1109598	1	T	core_nonrep	5	1	1
Rue3-1-31	4	1113024	1113025	1	C	core_nonrep	8	0.8	1
Rue3-1-31	4	1114061	1114062	1	T	core_nonrep	3	1	1
Rue3-1-31	4	1119738	1119739	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	1121640	1121641	1	T	nonrep	3	1	1
Rue3-1-31	4	1122161	1122162	2	TA	core_nonrep	4	1	1
Rue3-1-31	4	1137243	1137244	1	T	core_nonrep	3	1	1
Rue3-1-31	4	1139739	1139740	1	T	core_nonrep	9	1	1
Rue3-1-31	4	1151500	1151501	2	AT	core_nonrep	6	1	1
Rue3-1-31	4	1165437	1165438	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	1218648	1218649	2	TT	core_nonrep	6	1	1
Rue3-1-31	4	1261527	1261528	1	T	core_nonrep	7	1	1
Rue3-1-31	4	1270640	1270641	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	1271350	1271351	1	A	core_nonrep	4	1	1
Rue3-1-31	4	1272472	1272473	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	1278588	1278589	2	AT	core_nonrep	6	1	1
Rue3-1-31	4	1283941	1283942	2	CT	core_nonrep	6	1	1
Rue3-1-31	4	1288339	1288340	1	T	core_nonrep	8	1	1
Rue3-1-31	4	1288646	1288647	3	AAA	core_nonrep	6	1	1.14286
Rue3-1-31	4	1288838	1288839	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	1289935	1289936	1	C	core_nonrep	6	1	1
Rue3-1-31	4	1296677	1296678	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	1298913	1298914	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1300376	1300377	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1301019	1301020	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1306179	1306180	1	A	core_nonrep	3	1	1
Rue3-1-31	4	1335782	1335783	2	AG	core_nonrep	8	1	1
Rue3-1-31	4	1345804	1345805	1	A	core_nonrep	6	1	1
Rue3-1-31	4	1355199	1355200	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1356275	1356276	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	1379426	1379427	1	A	core_nonrep	5	1	1
Rue3-1-31	4	1381209	1381210	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	1382400	1382401	1	T	core_nonrep	8	1	1
Rue3-1-31	4	1394827	1394828	2	AC	core_nonrep	3	0.75	1
Rue3-1-31	4	1400447	1400448	1	T	core_nonrep	14	0.75	1
Rue3-1-31	4	1401786	1401787	1	T	core_nonrep	10	1	1
Rue3-1-31	4	1407789	1407790	1	A	core_nonrep	4	1	1
Rue3-1-31	4	1408926	1408927	1	T	core_nonrep	11	1	1
Rue3-1-31	4	1408948	1408949	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	1415338	1415339	1	A	core_nonrep	4	1	1
Rue3-1-31	4	1416201	1416202	1	A	core_nonrep	12	0.875	1
Rue3-1-31	4	1420946	1420947	1	A	core_nonrep	15	1	1
Rue3-1-31	4	1424290	1424291	1	A	core_nonrep	8	1	1
Rue3-1-31	4	1424303	1424304	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	1429019	1429020	1	T	core_nonrep	10	0.9	1
Rue3-1-31	4	1432110	1432111	1	T	core_nonrep	10	1	1
Rue3-1-31	4	1433301	1433302	3	TTT	core_nonrep	5	0.833333	1
Rue3-1-31	4	1436683	1436684	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	4	1440077	1440078	1	G	core_nonrep	6	0.8	1
Rue3-1-31	4	1440347	1440348	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	4	1441556	1441557	1	T	core_nonrep	20	0.863636	1
Rue3-1-31	4	1442077	1442078	1	T	core_nonrep	6	1	1.8
Rue3-1-31	4	1442249	1442250	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1445954	1445955	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1446636	1446637	1	A	nonrep	3	1	1
Rue3-1-31	4	1448015	1448016	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	1480711	1480712	1	C	core_nonrep	6	0.8	1
Rue3-1-31	4	1488280	1488281	1	T	nonrep	3	1	1
Rue3-1-31	4	1494985	1494986	1	A	core_nonrep	7	1	1
Rue3-1-31	4	1495943	1495944	1	G	core_nonrep	4	1	1
Rue3-1-31	4	1496119	1496120	1	G	nonrep	3	0.75	1
Rue3-1-31	4	1496120	1496121	1	A	core_nonrep	3	1	1
Rue3-1-31	4	1496145	1496146	1	A	core_nonrep	6	1	1
Rue3-1-31	4	1496149	1496150	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1496305	1496306	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	1496471	1496472	1	A	nonrep	3	1	1
Rue3-1-31	4	1496919	1496920	1	C	nonrep	3	0.75	1
Rue3-1-31	4	1504713	1504714	1	C	core_nonrep	11	0.833333	1
Rue3-1-31	4	1510423	1510424	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1513059	1513060	1	G	core_nonrep	10	1	1
Rue3-1-31	4	1515114	1515115	1	G	core_nonrep	6	1	1
Rue3-1-31	4	1526098	1526099	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	1527053	1527054	1	C	core_nonrep	5	1	1
Rue3-1-31	4	1527601	1527602	1	C	core_nonrep	12	1	1
Rue3-1-31	4	1528263	1528264	2	AA	core_nonrep	8	0.8	1
Rue3-1-31	4	1532139	1532140	1	A	core_nonrep	5	1	1
Rue3-1-31	4	1532409	1532410	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	1532689	1532690	2	CT	core_nonrep	3	1	1
Rue3-1-31	4	1535902	1535903	1	C	core_nonrep	5	1	1
Rue3-1-31	4	1536061	1536062	1	T	nonrep	7	0.7	1
Rue3-1-31	4	1536617	1536618	1	G	core_nonrep	12	1	1
Rue3-1-31	4	1539455	1539456	1	C	core_nonrep	3	1	1
Rue3-1-31	4	1540397	1540398	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	1568125	1568126	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	1571493	1571494	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	4	1571560	1571561	1	C	core_nonrep	9	1	1
Rue3-1-31	4	1581528	1581529	1	T	core_nonrep	13	0.818182	1
Rue3-1-31	4	1585760	1585761	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	1586550	1586551	1	T	nonrep	3	0.75	1
Rue3-1-31	4	1586684	1586685	1	A	core_nonrep	4	1	1
Rue3-1-31	4	1586689	1586690	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	1594323	1594324	1	G	core_nonrep	7	1	1
Rue3-1-31	4	1594388	1594389	1	G	core_nonrep	7	1	1
Rue3-1-31	4	1596342	1596343	1	A	core_nonrep	8	1	1
Rue3-1-31	4	1597673	1597674	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	4	1599494	1599495	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	1605323	1605324	1	A	core_nonrep	7	1	1
Rue3-1-31	4	1608142	1608143	1	A	core_nonrep	6	1	1
Rue3-1-31	4	1609823	1609824	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	1610308	1610309	1	A	core_nonrep	3	1	1
Rue3-1-31	4	1610509	1610510	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	1630724	1630725	1	A	core_nonrep	8	1	1.125
Rue3-1-31	4	1641340	1641341	1	A	core_nonrep	5	1	1
Rue3-1-31	4	1646236	1646237	1	G	core_nonrep	8	0.714286	1.33333
Rue3-1-31	4	1646645	1646646	1	T	core_nonrep	15	1	1
Rue3-1-31	4	1656464	1656465	1	T	core_nonrep	3	1	1
Rue3-1-31	4	1656823	1656824	1	A	core_nonrep	3	1	1
Rue3-1-31	4	1664347	1664348	1	T	nonrep	3	1	1
Rue3-1-31	4	1670694	1670695	2	AA	core_nonrep	10	0.75	1.26667
Rue3-1-31	4	1673959	1673960	1	T	core_nonrep	12	1	1.78571
Rue3-1-31	4	1697522	1697523	1	A	core_nonrep	10	1	1.23077
Rue3-1-31	4	1743889	1743890	1	T	core_nonrep	9	0.875	1
Rue3-1-31	4	1750485	1750486	1	A	core_nonrep	5	1	1
Rue3-1-31	4	1770293	1770294	1	A	core_nonrep	7	1	1
Rue3-1-31	4	1771751	1771752	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	4	1773526	1773527	1	C	core_nonrep	5	1	1
Rue3-1-31	4	1773840	1773841	1	C	core_nonrep	8	1	1
Rue3-1-31	4	1779097	1779098	1	T	core_nonrep	13	0.846154	1
Rue3-1-31	4	1779098	1779099	1	G	core_nonrep	13	0.857143	1
Rue3-1-31	4	1816348	1816349	1	T	nonrep	7	0.875	1.11111
Rue3-1-31	4	1818869	1818870	1	G	core_nonrep	6	1	1
Rue3-1-31	4	1819391	1819392	1	A	core_nonrep	10	1	1
Rue3-1-31	4	1834127	1834128	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1834128	1834129	1	T	core_nonrep	3	1	1
Rue3-1-31	4	1835717	1835718	1	G	core_nonrep	13	1	1
Rue3-1-31	4	1849254	1849255	1	T	core_nonrep	4	1	1
Rue3-1-31	4	1850353	1850354	1	T	core_nonrep	10	0.875	1
Rue3-1-31	4	1850354	1850355	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	4	1851044	1851045	1	C	nonrep	3	0.75	1
Rue3-1-31	4	1865831	1865832	1	A	core_nonrep	13	0.846154	1
Rue3-1-31	4	1893084	1893085	1	C	core_nonrep	4	1	1
Rue3-1-31	4	1895385	1895386	1	T	core_nonrep	6	1	1
Rue3-1-31	4	1899641	1899642	1	A	core_nonrep	6	1	1
Rue3-1-31	4	1899724	1899725	1	C	core_nonrep	6	1	1.08333
Rue3-1-31	4	1938506	1938507	2	AA	core_nonrep	3	1	1
Rue3-1-31	4	1938865	1938866	1	G	core_nonrep	6	1	1
Rue3-1-31	4	1949874	1949875	1	T	core_nonrep	14	1	1.31579
Rue3-1-31	4	1953510	1953511	1	T	core_nonrep	5	1	1.57143
Rue3-1-31	4	1961578	1961579	1	T	core_nonrep	9	1	1
Rue3-1-31	4	1969312	1969313	1	G	core_nonrep	4	1	1
Rue3-1-31	4	1971157	1971158	1	C	core_nonrep	11	0.9	1
Rue3-1-31	4	1974266	1974267	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	1979701	1979702	1	A	core_nonrep	8	1	1.1
Rue3-1-31	4	1981362	1981363	1	A	nonrep	3	0.75	1
Rue3-1-31	4	1981407	1981408	1	G	core_nonrep	4	1	1
Rue3-1-31	4	1986967	1986968	1	G	core_nonrep	6	0.75	1
Rue3-1-31	4	1999537	1999538	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	2011747	2011748	1	T	core_nonrep	3	1	1
Rue3-1-31	4	2016099	2016100	1	T	core_nonrep	9	0.8	1.36842
Rue3-1-31	4	2017146	2017147	1	T	core_nonrep	6	1	1
Rue3-1-31	4	2024807	2024808	1	T	core_nonrep	11	1	1
Rue3-1-31	4	2026508	2026509	1	T	nonrep	7	0.875	1
Rue3-1-31	4	2027145	2027146	1	T	core_nonrep	15	0.888889	1
Rue3-1-31	4	2032305	2032306	1	T	core_nonrep	14	0.8	1
Rue3-1-31	4	2036368	2036369	1	C	nonrep	4	0.8	1
Rue3-1-31	4	2043075	2043076	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	2049982	2049983	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	2051748	2051749	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	4	2051776	2051777	1	T	core_nonrep	10	0.875	1
Rue3-1-31	4	2054435	2054436	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	2058980	2058981	2	AA	core_nonrep	10	1	1
Rue3-1-31	4	2059938	2059939	1	T	core_nonrep	12	0.875	1
Rue3-1-31	4	2060038	2060039	1	G	core_nonrep	11	0.846154	1
Rue3-1-31	4	2069879	2069880	1	T	core_nonrep	32	0.939394	1.02857
Rue3-1-31	4	2073044	2073045	1	G	nonrep	5	0.714286	1
Rue3-1-31	4	2080495	2080496	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2085284	2085285	1	T	core_nonrep	6	1	1
Rue3-1-31	4	2111114	2111115	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	2136886	2136887	1	G	core_nonrep	11	1	1
Rue3-1-31	4	2137076	2137077	1	T	core_nonrep	14	0.923077	1
Rue3-1-31	4	2139345	2139346	1	G	core_nonrep	6	1	1
Rue3-1-31	4	2139411	2139412	1	T	core_nonrep	15	0.875	1
Rue3-1-31	4	2139669	2139670	1	G	core_nonrep	14	1	1
Rue3-1-31	4	2141256	2141257	1	A	core_nonrep	14	0.8125	1
Rue3-1-31	4	2164357	2164358	1	G	core_nonrep	10	1	1
Rue3-1-31	4	2164703	2164704	1	C	core_nonrep	7	1	1
Rue3-1-31	4	2167805	2167806	1	T	core_nonrep	14	0.833333	1
Rue3-1-31	4	2172735	2172736	1	C	core_nonrep	5	1	1
Rue3-1-31	4	2207943	2207944	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	2217772	2217773	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	2237530	2237531	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	4	2244743	2244744	1	T	core_nonrep	4	1	1
Rue3-1-31	4	2258907	2258908	1	T	core_nonrep	7	1	1
Rue3-1-31	4	2258961	2258962	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	2260694	2260695	1	T	core_nonrep	7	1	1
Rue3-1-31	4	2261155	2261156	1	A	core_nonrep	9	0.875	1.05882
Rue3-1-31	4	2278590	2278591	1	T	nonrep	3	0.75	1
Rue3-1-31	4	2289134	2289135	2	CA	core_nonrep	6	1	1
Rue3-1-31	4	2292349	2292350	1	C	core_nonrep	11	1	1
Rue3-1-31	4	2294309	2294310	1	T	nonrep	4	1	1
Rue3-1-31	4	2295502	2295503	1	A	nonrep	3	1	1
Rue3-1-31	4	2296400	2296401	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	2297808	2297809	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	2304531	2304532	1	A	core_nonrep	13	0.8125	1
Rue3-1-31	4	2306817	2306818	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	2308473	2308474	2	CG	core_nonrep	7	1	1
Rue3-1-31	4	2308993	2308994	1	G	core_nonrep	9	0.75	1
Rue3-1-31	4	2309003	2309004	1	C	core_nonrep	11	1	1
Rue3-1-31	4	2314880	2314881	1	T	core_nonrep	3	1	1
Rue3-1-31	4	2315880	2315881	1	C	core_nonrep	4	1	1
Rue3-1-31	4	2318217	2318218	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2323114	2323115	1	G	core_nonrep	4	1	1
Rue3-1-31	4	2325285	2325286	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	2332868	2332869	2	AT	core_nonrep	5	1	1
Rue3-1-31	4	2337849	2337850	1	C	core_nonrep	3	1	1
Rue3-1-31	4	2338502	2338503	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	2338505	2338506	1	A	core_nonrep	3	1	1
Rue3-1-31	4	2340929	2340930	1	T	core_nonrep	3	1	1
Rue3-1-31	4	2347322	2347323	2	TG	core_nonrep	4	0.75	1
Rue3-1-31	4	2347889	2347890	1	T	core_nonrep	13	0.75	1
Rue3-1-31	4	2357223	2357224	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2358509	2358510	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2360907	2360908	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	4	2371213	2371214	1	C	core_nonrep	10	1	1
Rue3-1-31	4	2398048	2398049	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2400038	2400039	1	A	nonrep	3	1	1
Rue3-1-31	4	2409513	2409514	1	T	core_nonrep	8	0.75	1
Rue3-1-31	4	2409514	2409515	1	G	core_nonrep	9	1	1
Rue3-1-31	4	2409884	2409885	1	A	core_nonrep	11	1	1
Rue3-1-31	4	2415815	2415816	1	C	core_nonrep	7	1	1
Rue3-1-31	4	2418550	2418551	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	4	2419166	2419167	1	C	core_nonrep	4	1	1
Rue3-1-31	4	2421185	2421186	1	A	core_nonrep	8	1	1
Rue3-1-31	4	2430467	2430468	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2447127	2447128	2	TT	nonrep	4	1	1
Rue3-1-31	4	2448073	2448074	2	AC	core_nonrep	6	0.833333	1
Rue3-1-31	4	2452885	2452886	1	A	core_nonrep	7	1	1
Rue3-1-31	4	2453288	2453289	1	T	core_nonrep	10	1	1
Rue3-1-31	4	2453479	2453480	1	C	core_nonrep	9	0.875	1
Rue3-1-31	4	2464934	2464935	1	T	core_nonrep	4	1	1
Rue3-1-31	4	2465774	2465775	1	G	core_nonrep	7	1	1
Rue3-1-31	4	2465838	2465839	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	2466415	2466416	1	A	core_nonrep	11	1	1
Rue3-1-31	4	2467735	2467736	1	A	core_nonrep	4	1	1.5
Rue3-1-31	4	2476130	2476131	1	A	core_nonrep	10	1	1
Rue3-1-31	4	2481836	2481837	1	A	core_nonrep	3	1	1
Rue3-1-31	4	2485364	2485365	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2486107	2486108	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2507836	2507837	1	G	core_nonrep	11	0.9	1
Rue3-1-31	4	2519583	2519584	1	C	core_nonrep	6	1	1
Rue3-1-31	4	2523120	2523121	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2529793	2529794	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	4	2532529	2532530	1	C	nonrep	3	0.75	1
Rue3-1-31	4	2532962	2532963	1	A	core_nonrep	13	1	1
Rue3-1-31	4	2533020	2533021	2	GC	core_nonrep	13	1	1
Rue3-1-31	4	2536523	2536524	1	T	core_nonrep	10	0.875	1
Rue3-1-31	4	2544002	2544003	1	T	core_nonrep	4	1	1
Rue3-1-31	4	2544049	2544050	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	2544050	2544051	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	2544865	2544866	1	A	core_nonrep	8	1	1
Rue3-1-31	4	2547502	2547503	1	T	nonrep	6	0.75	1
Rue3-1-31	4	2550318	2550319	1	T	nonrep	3	0.75	1.2
Rue3-1-31	4	2552001	2552002	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2552659	2552660	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2552829	2552830	1	A	nonrep	5	1	1
Rue3-1-31	4	2556023	2556024	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	2559103	2559104	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2560974	2560975	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	2562407	2562408	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2562724	2562725	1	T	nonrep	3	1	1
Rue3-1-31	4	2569155	2569156	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	2569430	2569431	2	TT	core_nonrep	15	0.875	1
Rue3-1-31	4	2570550	2570551	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	2570841	2570842	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	2571301	2571302	1	T	core_nonrep	6	1	1
Rue3-1-31	4	2575169	2575170	1	T	core_nonrep	8	0.875	1
Rue3-1-31	4	2576332	2576333	1	T	core_nonrep	6	1	1
Rue3-1-31	4	2577167	2577168	1	T	core_nonrep	8	1	1.2
Rue3-1-31	4	2577334	2577335	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2577801	2577802	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2578821	2578822	1	A	core_nonrep	8	1	1
Rue3-1-31	4	2579776	2579777	1	G	nonrep	5	0.833333	1
Rue3-1-31	4	2582441	2582442	1	C	core_nonrep	19	1	1
Rue3-1-31	4	2586317	2586318	1	T	core_nonrep	6	1	1
Rue3-1-31	4	2587382	2587383	1	G	core_nonrep	14	1	1
Rue3-1-31	4	2587833	2587834	3	CAG	core_nonrep	10	0.9	1
Rue3-1-31	4	2587960	2587961	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	4	2589577	2589578	1	T	core_nonrep	7	1	1
Rue3-1-31	4	2589815	2589816	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	4	2592141	2592142	1	T	core_nonrep	8	1	1
Rue3-1-31	4	2594568	2594569	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	2595366	2595367	1	C	core_nonrep	4	1	1
Rue3-1-31	4	2608408	2608409	1	A	core_nonrep	9	1	1
Rue3-1-31	4	2614942	2614943	2	TG	core_nonrep	4	1	1
Rue3-1-31	4	2618994	2618995	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	4	2620361	2620362	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	2628605	2628606	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2629728	2629729	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2630410	2630411	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2670301	2670302	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	2673526	2673527	1	G	core_nonrep	3	1	1
Rue3-1-31	4	2674658	2674659	1	C	core_nonrep	6	1	1
Rue3-1-31	4	2682771	2682772	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	2684994	2684995	1	A	core_nonrep	7	1	1
Rue3-1-31	4	2685054	2685055	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2689044	2689045	1	A	core_nonrep	11	1	1
Rue3-1-31	4	2690256	2690257	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	4	2693303	2693304	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	2695460	2695461	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	2695475	2695476	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2714218	2714219	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	2716080	2716081	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2718016	2718017	1	A	core_nonrep	7	0.75	1.06667
Rue3-1-31	4	2719796	2719797	1	A	core_nonrep	23	1	1
Rue3-1-31	4	2723249	2723250	1	C	core_nonrep	6	1	1
Rue3-1-31	4	2728835	2728836	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	2738497	2738498	1	C	core_nonrep	20	0.777778	1
Rue3-1-31	4	2744495	2744496	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	2756598	2756599	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2758380	2758381	1	G	core_nonrep	10	0.875	1
Rue3-1-31	4	2758730	2758731	1	A	core_nonrep	8	1	1
Rue3-1-31	4	2763817	2763818	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	2764161	2764162	2	TC	core_nonrep	6	1	1
Rue3-1-31	4	2767237	2767238	1	A	core_nonrep	5	1	1
Rue3-1-31	4	2768965	2768966	1	G	core_nonrep	9	1	1
Rue3-1-31	4	2769623	2769624	1	T	core_nonrep	4	1	1
Rue3-1-31	4	2769624	2769625	1	G	core_nonrep	5	1	1
Rue3-1-31	4	2774293	2774294	1	T	core_nonrep	3	1	1
Rue3-1-31	4	2776019	2776020	1	G	core_nonrep	4	0.8	1
Rue3-1-31	4	2776487	2776488	1	T	core_nonrep	5	1	1
Rue3-1-31	4	2777718	2777719	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	2781577	2781578	1	T	core_nonrep	4	1	1
Rue3-1-31	4	2785293	2785294	1	A	core_nonrep	8	0.777778	1.07692
Rue3-1-31	4	2785651	2785652	1	T	core_nonrep	17	1	1
Rue3-1-31	4	2813731	2813732	1	A	core_nonrep	4	1	1
Rue3-1-31	4	2818773	2818774	1	C	core_nonrep	18	0.894737	1
Rue3-1-31	4	2850803	2850804	1	C	core_nonrep	11	0.8	1
Rue3-1-31	4	2851720	2851721	1	T	core_nonrep	9	1	1
Rue3-1-31	4	2854545	2854546	1	A	core_nonrep	6	1	1
Rue3-1-31	4	2859659	2859660	1	C	core_nonrep	9	1	1
Rue3-1-31	4	2894798	2894799	2	TA	core_nonrep	5	1	1
Rue3-1-31	4	2897979	2897980	2	AC	core_nonrep	17	1	1.11538
Rue3-1-31	4	2906120	2906121	1	A	core_nonrep	8	1	1
Rue3-1-31	4	2907370	2907371	1	A	core_nonrep	7	1	1
Rue3-1-31	4	2907372	2907373	1	T	core_nonrep	7	1	1
Rue3-1-31	4	2976503	2976504	1	C	core_nonrep	11	1	1
Rue3-1-31	4	3063736	3063737	1	T	core_nonrep	8	1	1.07692
Rue3-1-31	4	3073353	3073354	1	C	core_nonrep	8	0.857143	1.85714
Rue3-1-31	4	3359175	3359176	1	T	core_nonrep	3	1	1
Rue3-1-31	4	3390274	3390275	1	C	core_nonrep	12	0.875	1
Rue3-1-31	4	3392898	3392899	1	C	core_nonrep	9	0.75	1
Rue3-1-31	4	3401993	3401994	1	T	core_nonrep	17	1	1
Rue3-1-31	4	3474975	3474976	1	T	core_nonrep	14	1	1
Rue3-1-31	4	3516772	3516773	1	T	core_nonrep	8	1	1
Rue3-1-31	4	3528710	3528711	1	T	core_nonrep	16	0.916667	1
Rue3-1-31	4	3530284	3530285	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	3530294	3530295	1	A	core_nonrep	3	1	1
Rue3-1-31	4	3610124	3610125	1	T	core_nonrep	11	1	1
Rue3-1-31	4	3649426	3649427	1	G	core_nonrep	29	0.735294	1
Rue3-1-31	4	3668346	3668347	1	T	core_nonrep	8	1	1
Rue3-1-31	4	3670591	3670592	1	T	core_nonrep	4	1	1
Rue3-1-31	4	3670630	3670631	1	T	core_nonrep	4	1	1
Rue3-1-31	4	3700143	3700144	1	G	core_nonrep	19	1	1
Rue3-1-31	4	3719187	3719188	1	T	core_nonrep	7	1	1
Rue3-1-31	4	3721603	3721604	1	T	core_nonrep	11	1	1
Rue3-1-31	4	3722518	3722519	1	T	core_nonrep	5	1	1
Rue3-1-31	4	3722624	3722625	1	T	core_nonrep	6	1	1
Rue3-1-31	4	3778542	3778543	1	G	core_nonrep	7	0.8	1
Rue3-1-31	4	3803519	3803520	1	G	core_nonrep	8	0.8	1
Rue3-1-31	4	3806967	3806968	1	A	core_nonrep	3	1	1
Rue3-1-31	4	3806990	3806991	1	T	core_nonrep	4	1	1
Rue3-1-31	4	3823739	3823740	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	3837867	3837868	2	AA	core_nonrep	9	0.7	1
Rue3-1-31	4	3857102	3857103	1	A	core_nonrep	17	1	1
Rue3-1-31	4	3857131	3857132	1	A	core_nonrep	10	1	1
Rue3-1-31	4	3877445	3877446	1	G	core_nonrep	13	0.785714	1
Rue3-1-31	4	3939016	3939017	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	4027617	4027618	1	A	core_nonrep	3	0.75	1.44444
Rue3-1-31	4	4073682	4073683	1	G	core_nonrep	13	1	1
Rue3-1-31	4	4117445	4117446	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	4128482	4128483	1	T	core_nonrep	6	1	1
Rue3-1-31	4	4132161	4132162	1	A	core_nonrep	7	0.75	1
Rue3-1-31	4	4200418	4200419	1	G	nonrep	3	1	1
Rue3-1-31	4	4207545	4207546	1	C	nonrep	4	1	1
Rue3-1-31	4	4212999	4213000	1	G	core_nonrep	19	1	1
Rue3-1-31	4	4241558	4241559	1	C	core_nonrep	4	1	1
Rue3-1-31	4	4318640	4318641	1	T	core_nonrep	18	1	1
Rue3-1-31	4	4366704	4366705	1	C	core_nonrep	20	1	1.12
Rue3-1-31	4	4458918	4458919	1	T	core_nonrep	9	1	1
Rue3-1-31	4	4588482	4588483	1	A	core_nonrep	3	1	1
Rue3-1-31	4	4591950	4591951	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	4	4591958	4591959	1	G	core_nonrep	9	0.818182	1
Rue3-1-31	4	4608465	4608466	1	C	nonrep	3	0.75	1
Rue3-1-31	4	4688207	4688208	1	C	core_nonrep	7	0.857143	1.63636
Rue3-1-31	4	4822865	4822866	1	C	core_nonrep	19	0.947368	1
Rue3-1-31	4	4848581	4848582	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	4	4851618	4851619	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	4867916	4867917	2	AA	core_nonrep	8	1	1
Rue3-1-31	4	4872110	4872111	1	A	core_nonrep	7	1	1
Rue3-1-31	4	4884142	4884143	1	T	core_nonrep	3	1	1
Rue3-1-31	4	4889069	4889070	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	4889072	4889073	1	A	core_nonrep	6	1	1
Rue3-1-31	4	4892221	4892222	1	A	core_nonrep	3	1	1
Rue3-1-31	4	4898656	4898657	1	T	core_nonrep	6	0.714286	1.14286
Rue3-1-31	4	4913252	4913253	1	A	core_nonrep	5	1	1
Rue3-1-31	4	4913883	4913884	1	T	core_nonrep	17	1	1
Rue3-1-31	4	4915576	4915577	1	T	core_nonrep	7	1	1
Rue3-1-31	4	4917603	4917604	1	C	core_nonrep	3	1	1
Rue3-1-31	4	4923113	4923114	1	C	core_nonrep	5	1	1
Rue3-1-31	4	4933990	4933991	1	G	core_nonrep	14	1	1
Rue3-1-31	4	4935264	4935265	1	A	nonrep	3	1	1
Rue3-1-31	4	4941758	4941759	1	C	core_nonrep	3	1	1
Rue3-1-31	4	4955342	4955343	1	A	core_nonrep	10	0.75	1
Rue3-1-31	4	4971280	4971281	1	T	core_nonrep	6	1	1
Rue3-1-31	4	4971480	4971481	1	G	core_nonrep	10	0.875	1
Rue3-1-31	4	4977193	4977194	1	G	core_nonrep	19	0.944444	1
Rue3-1-31	4	4991700	4991701	1	A	core_nonrep	3	1	1
Rue3-1-31	4	4993766	4993767	2	CT	core_nonrep	18	0.772727	1.19231
Rue3-1-31	4	5009417	5009418	1	T	core_nonrep	15	1	1
Rue3-1-31	4	5015670	5015671	1	A	core_nonrep	17	0.866667	1
Rue3-1-31	4	5019085	5019086	1	T	core_nonrep	17	0.941176	1.89655
Rue3-1-31	4	5029743	5029744	1	G	core_nonrep	23	1	1
Rue3-1-31	4	5040357	5040358	1	A	core_nonrep	38	0.939394	1
Rue3-1-31	4	5062329	5062330	1	C	core_nonrep	12	0.8	1
Rue3-1-31	4	5074087	5074088	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5078968	5078969	1	C	core_nonrep	13	1	1
Rue3-1-31	4	5113595	5113596	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	4	5116956	5116957	1	T	core_nonrep	15	0.933333	1
Rue3-1-31	4	5118666	5118667	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	5118667	5118668	2	TG	core_nonrep	3	1	1
Rue3-1-31	4	5122965	5122966	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5125545	5125546	1	T	nonrep	3	0.75	1
Rue3-1-31	4	5138266	5138267	1	T	core_nonrep	10	0.7	1
Rue3-1-31	4	5139042	5139043	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	4	5146133	5146134	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	5147673	5147674	1	A	nonrep	6	0.75	1
Rue3-1-31	4	5167421	5167422	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	5168257	5168258	1	A	core_nonrep	10	0.9	1
Rue3-1-31	4	5194515	5194516	1	A	core_nonrep	3	0.75	1.14286
Rue3-1-31	4	5216739	5216740	1	A	core_nonrep	6	1	1
Rue3-1-31	4	5219294	5219295	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	5220948	5220949	1	A	nonrep	4	0.8	1
Rue3-1-31	4	5223377	5223378	1	C	core_nonrep	15	1	1
Rue3-1-31	4	5235147	5235148	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5235989	5235990	1	A	core_nonrep	6	1	1
Rue3-1-31	4	5241924	5241925	1	C	nonrep	3	0.75	1
Rue3-1-31	4	5241925	5241926	1	T	nonrep	3	0.75	1
Rue3-1-31	4	5265333	5265334	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	5267619	5267620	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5267717	5267718	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	5276593	5276594	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	5278537	5278538	1	T	nonrep	3	1	1
Rue3-1-31	4	5282069	5282070	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	4	5284643	5284644	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5291050	5291051	2	TT	core_nonrep	6	1	1
Rue3-1-31	4	5293095	5293096	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5294702	5294703	1	G	core_nonrep	3	1	1
Rue3-1-31	4	5295886	5295887	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	5299979	5299980	1	T	core_nonrep	10	1	1
Rue3-1-31	4	5301991	5301992	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5312781	5312782	2	CT	core_nonrep	4	1	1
Rue3-1-31	4	5312949	5312950	1	T	core_nonrep	3	1	1
Rue3-1-31	4	5312950	5312951	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5313073	5313074	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	5314970	5314971	2	GA	core_nonrep	6	1	1
Rue3-1-31	4	5325920	5325921	1	A	nonrep	3	1	1
Rue3-1-31	4	5355911	5355912	1	T	core_nonrep	3	1	1
Rue3-1-31	4	5358785	5358786	1	A	core_nonrep	4	1	1
Rue3-1-31	4	5363778	5363779	1	G	nonrep	4	1	1
Rue3-1-31	4	5367834	5367835	3	TTT	core_nonrep	4	0.75	1
Rue3-1-31	4	5371132	5371133	2	AA	nonrep	7	0.7	1
Rue3-1-31	4	5371675	5371676	1	G	core_nonrep	5	1	1
Rue3-1-31	4	5374856	5374857	1	A	core_nonrep	10	1	1
Rue3-1-31	4	5375599	5375600	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5381575	5381576	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	4	5391613	5391614	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5398009	5398010	1	T	core_nonrep	10	0.75	1.1875
Rue3-1-31	4	5408678	5408679	1	G	core_nonrep	5	1	1
Rue3-1-31	4	5410641	5410642	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	5424990	5424991	1	C	core_nonrep	11	1	1
Rue3-1-31	4	5426883	5426884	1	C	core_nonrep	7	1	1
Rue3-1-31	4	5433895	5433896	1	C	core_nonrep	10	0.727273	1
Rue3-1-31	4	5435155	5435156	1	A	core_nonrep	6	1	1
Rue3-1-31	4	5436717	5436718	1	T	core_nonrep	11	1	1
Rue3-1-31	4	5438179	5438180	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5448173	5448174	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	4	5455458	5455459	1	G	core_nonrep	6	1	1
Rue3-1-31	4	5456110	5456111	2	AT	core_nonrep	7	1	1
Rue3-1-31	4	5456112	5456113	1	C	core_nonrep	7	1	1
Rue3-1-31	4	5456699	5456700	1	A	core_nonrep	4	1	1
Rue3-1-31	4	5457893	5457894	1	T	core_nonrep	7	1	1
Rue3-1-31	4	5459215	5459216	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	5461505	5461506	1	C	core_nonrep	3	0.75	1
Rue3-1-31	4	5461506	5461507	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	5464557	5464558	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	4	5477197	5477198	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	5493338	5493339	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	4	5496274	5496275	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5496281	5496282	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5503823	5503824	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5507147	5507148	1	A	core_nonrep	9	1	1
Rue3-1-31	4	5516559	5516560	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	5516992	5516993	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5545662	5545663	1	C	core_nonrep	3	1	1
Rue3-1-31	4	5547489	5547490	1	A	core_nonrep	6	1	1
Rue3-1-31	4	5553243	5553244	2	TA	core_nonrep	4	1	1
Rue3-1-31	4	5558222	5558223	1	C	core_nonrep	4	0.75	1
Rue3-1-31	4	5568148	5568149	1	G	core_nonrep	22	0.869565	1.05556
Rue3-1-31	4	5569512	5569513	1	T	core_nonrep	24	1	1
Rue3-1-31	4	5572955	5572956	1	C	core_nonrep	23	1	1
Rue3-1-31	4	5576277	5576278	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5577721	5577722	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	4	5579074	5579075	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	4	5580441	5580442	2	CA	core_nonrep	3	1	1
Rue3-1-31	4	5588373	5588374	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	4	5596659	5596660	1	A	core_nonrep	4	1	1
Rue3-1-31	4	5601751	5601752	1	T	nonrep	3	0.75	1
Rue3-1-31	4	5631282	5631283	3	AAC	core_nonrep	8	1	1
Rue3-1-31	4	5631414	5631415	3	ACA	core_nonrep	10	0.818182	1
Rue3-1-31	4	5634360	5634361	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5635654	5635655	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5641706	5641707	1	T	core_nonrep	3	1	1
Rue3-1-31	4	5642757	5642758	1	G	core_nonrep	5	1	1
Rue3-1-31	4	5646268	5646269	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	5650014	5650015	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	5653712	5653713	1	G	core_nonrep	3	1	1
Rue3-1-31	4	5656257	5656258	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	5661074	5661075	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5675170	5675171	1	T	nonrep	3	1	1
Rue3-1-31	4	5675410	5675411	1	G	core_nonrep	5	1	1
Rue3-1-31	4	5681260	5681261	1	G	core_nonrep	3	1	1
Rue3-1-31	4	5683215	5683216	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	5698169	5698170	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	5710630	5710631	1	T	core_nonrep	3	1	1
Rue3-1-31	4	5715825	5715826	1	G	nonrep	3	1	1
Rue3-1-31	4	5718661	5718662	1	T	nonrep	3	0.75	1
Rue3-1-31	4	5720670	5720671	1	C	nonrep	3	0.75	1
Rue3-1-31	4	5724202	5724203	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	5726984	5726985	2	TA	core_nonrep	12	1	1
Rue3-1-31	4	5732186	5732187	1	A	core_nonrep	10	0.875	1
Rue3-1-31	4	5733198	5733199	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	5733439	5733440	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	5733441	5733442	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5734776	5734777	1	T	nonrep	3	1	1
Rue3-1-31	4	5738849	5738850	1	A	core_nonrep	8	1	1
Rue3-1-31	4	5743494	5743495	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5747798	5747799	3	CAT	core_nonrep	11	0.769231	1
Rue3-1-31	4	5749910	5749911	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5761011	5761012	1	A	nonrep	3	0.75	1
Rue3-1-31	4	5771965	5771966	1	T	core_nonrep	13	0.75	1
Rue3-1-31	4	5780274	5780275	1	G	core_nonrep	4	1	1
Rue3-1-31	4	5781110	5781111	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	4	5781168	5781169	1	T	core_nonrep	5	1	1
Rue3-1-31	4	5781363	5781364	1	C	core_nonrep	5	1	1
Rue3-1-31	4	5781364	5781365	1	T	core_nonrep	5	1	1
Rue3-1-31	4	5783195	5783196	1	A	core_nonrep	7	1	1
Rue3-1-31	4	5784411	5784412	1	T	core_nonrep	13	1	1
Rue3-1-31	4	5784544	5784545	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	5784545	5784546	1	T	core_nonrep	7	1	1
Rue3-1-31	4	5784736	5784737	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	4	5789575	5789576	1	T	nonrep	4	0.8	1
Rue3-1-31	4	5797416	5797417	1	A	core_nonrep	5	1	1
Rue3-1-31	4	5797765	5797766	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	5799639	5799640	2	AA	core_nonrep	9	0.875	1
Rue3-1-31	4	5801448	5801449	3	ATG	core_nonrep	5	1	1
Rue3-1-31	4	5803137	5803138	2	TG	core_nonrep	6	0.857143	1
Rue3-1-31	4	5809572	5809573	1	C	core_nonrep	3	1	1
Rue3-1-31	4	5827295	5827296	1	G	nonrep	4	0.8	1
Rue3-1-31	4	5837469	5837470	1	A	core_nonrep	11	1	1
Rue3-1-31	4	5838262	5838263	1	T	core_nonrep	5	1	1
Rue3-1-31	4	5842161	5842162	1	T	core_nonrep	12	1	1
Rue3-1-31	4	5847320	5847321	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	5847460	5847461	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	5848278	5848279	1	T	core_nonrep	8	1	1
Rue3-1-31	4	5849390	5849391	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	4	5849685	5849686	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	4	5909010	5909011	1	A	core_nonrep	3	1	1
Rue3-1-31	4	5923442	5923443	1	T	core_nonrep	4	1	1
Rue3-1-31	4	5935212	5935213	2	TT	core_nonrep	5	0.8	1.125
Rue3-1-31	4	5976413	5976414	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	6028190	6028191	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	6056355	6056356	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6062036	6062037	1	A	core_nonrep	9	0.9	1
Rue3-1-31	4	6063737	6063738	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6075199	6075200	1	T	core_nonrep	8	1	1
Rue3-1-31	4	6075422	6075423	2	AT	core_nonrep	5	1	1
Rue3-1-31	4	6075659	6075660	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6092020	6092021	1	T	core_nonrep	9	0.8	1
Rue3-1-31	4	6093700	6093701	1	G	core_nonrep	4	1	1
Rue3-1-31	4	6095090	6095091	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	6098575	6098576	1	A	nonrep	3	1	1
Rue3-1-31	4	6113221	6113222	1	C	core_nonrep	13	1	1
Rue3-1-31	4	6116497	6116498	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6117862	6117863	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6118280	6118281	1	C	core_nonrep	13	0.846154	1
Rue3-1-31	4	6121398	6121399	1	T	core_nonrep	13	1	1
Rue3-1-31	4	6121399	6121400	1	A	core_nonrep	13	1	1
Rue3-1-31	4	6123348	6123349	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	4	6140964	6140965	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6141153	6141154	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6143538	6143539	1	A	nonrep	4	0.8	1
Rue3-1-31	4	6174051	6174052	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	4	6175102	6175103	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6179983	6179984	1	T	core_nonrep	8	1	1
Rue3-1-31	4	6181727	6181728	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6184241	6184242	1	A	core_nonrep	5	1	1.28571
Rue3-1-31	4	6187438	6187439	1	G	core_nonrep	6	1	1
Rue3-1-31	4	6194771	6194772	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6194778	6194779	1	T	core_nonrep	7	1	1
Rue3-1-31	4	6209420	6209421	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6209586	6209587	1	C	core_nonrep	10	1	1
Rue3-1-31	4	6210830	6210831	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6212677	6212678	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	6212888	6212889	1	G	core_nonrep	18	1	1
Rue3-1-31	4	6215374	6215375	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	6219878	6219879	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6221241	6221242	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6222780	6222781	1	T	core_nonrep	11	1	1
Rue3-1-31	4	6224036	6224037	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6228656	6228657	1	C	core_nonrep	8	1	1
Rue3-1-31	4	6231610	6231611	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6233728	6233729	1	G	core_nonrep	10	1	1
Rue3-1-31	4	6236324	6236325	1	T	core_nonrep	13	1	1
Rue3-1-31	4	6238145	6238146	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	6239507	6239508	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	6239769	6239770	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	6248990	6248991	3	TAC	core_nonrep	9	0.9	1
Rue3-1-31	4	6253934	6253935	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6258255	6258256	1	G	nonrep	3	1	1
Rue3-1-31	4	6269037	6269038	2	AC	core_nonrep	9	0.8	1
Rue3-1-31	4	6273313	6273314	1	A	core_nonrep	11	1	1
Rue3-1-31	4	6274899	6274900	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6275824	6275825	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6275825	6275826	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6276867	6276868	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6290527	6290528	1	A	core_nonrep	10	0.9	1
Rue3-1-31	4	6293250	6293251	1	C	core_nonrep	6	1	1
Rue3-1-31	4	6299839	6299840	1	A	core_nonrep	8	0.8	1
Rue3-1-31	4	6303057	6303058	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6303059	6303060	1	G	core_nonrep	5	1	1
Rue3-1-31	4	6308385	6308386	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6308605	6308606	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	4	6312968	6312969	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6314110	6314111	2	GT	core_nonrep	6	1	1
Rue3-1-31	4	6314590	6314591	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	6314637	6314638	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6314643	6314644	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6314824	6314825	1	A	nonrep	3	1	1
Rue3-1-31	4	6314859	6314860	1	G	nonrep	5	0.833333	1
Rue3-1-31	4	6320284	6320285	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6321623	6321624	1	G	core_nonrep	9	1	1
Rue3-1-31	4	6322728	6322729	1	T	core_nonrep	10	1	1
Rue3-1-31	4	6326960	6326961	1	C	core_nonrep	6	1	1
Rue3-1-31	4	6329090	6329091	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	6330791	6330792	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6331857	6331858	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6338300	6338301	1	C	core_nonrep	14	0.909091	1
Rue3-1-31	4	6340443	6340444	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6343471	6343472	1	G	core_nonrep	7	0.8	1
Rue3-1-31	4	6345401	6345402	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6350092	6350093	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6354060	6354061	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	4	6355062	6355063	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	4	6355976	6355977	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6355979	6355980	1	G	core_nonrep	3	1	1
Rue3-1-31	4	6360227	6360228	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6385011	6385012	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	6391174	6391175	2	TG	core_nonrep	11	0.833333	1
Rue3-1-31	4	6405476	6405477	1	A	nonrep	3	1	1
Rue3-1-31	4	6406514	6406515	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6409868	6409869	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6410733	6410734	1	C	core_nonrep	13	1	1
Rue3-1-31	4	6411247	6411248	1	A	core_nonrep	10	1	1
Rue3-1-31	4	6412410	6412411	1	T	core_nonrep	5	1	1.16667
Rue3-1-31	4	6412970	6412971	1	C	core_nonrep	7	1	1
Rue3-1-31	4	6418665	6418666	1	C	core_nonrep	3	1	1
Rue3-1-31	4	6419009	6419010	1	T	core_nonrep	4	1	1.4
Rue3-1-31	4	6419985	6419986	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6420405	6420406	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6423298	6423299	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	6427707	6427708	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	6428580	6428581	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	6431886	6431887	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	4	6433677	6433678	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6438832	6438833	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6441375	6441376	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	4	6443432	6443433	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6445290	6445291	1	A	core_nonrep	13	1	1
Rue3-1-31	4	6701364	6701365	1	G	core_nonrep	5	1	1
Rue3-1-31	4	6706868	6706869	1	A	core_nonrep	15	1	1
Rue3-1-31	4	6709597	6709598	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6725704	6725705	1	A	core_nonrep	12	0.888889	1
Rue3-1-31	4	6728141	6728142	1	T	core_nonrep	15	1	1
Rue3-1-31	4	6732568	6732569	2	AT	core_nonrep	5	1	1
Rue3-1-31	4	6738924	6738925	1	T	core_nonrep	13	1	1
Rue3-1-31	4	6741907	6741908	1	A	core_nonrep	12	1	1
Rue3-1-31	4	6742095	6742096	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6743353	6743354	1	A	core_nonrep	9	1	1
Rue3-1-31	4	6743354	6743355	1	T	core_nonrep	9	1	1
Rue3-1-31	4	6743664	6743665	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6743818	6743819	1	C	nonrep	4	1	1
Rue3-1-31	4	6751759	6751760	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6752763	6752764	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6758205	6758206	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	6758450	6758451	1	C	core_nonrep	7	1	1
Rue3-1-31	4	6763933	6763934	1	T	core_nonrep	11	0.9	1
Rue3-1-31	4	6764437	6764438	1	T	core_nonrep	7	1	1
Rue3-1-31	4	6764466	6764467	1	A	core_nonrep	12	1	1
Rue3-1-31	4	6767204	6767205	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6771563	6771564	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6776805	6776806	1	G	core_nonrep	7	1	1
Rue3-1-31	4	6786426	6786427	2	TT	core_nonrep	3	1	1
Rue3-1-31	4	6791942	6791943	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6796511	6796512	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	6796519	6796520	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	6799728	6799729	2	AT	core_nonrep	3	1	1
Rue3-1-31	4	6799748	6799749	2	AT	core_nonrep	4	1	1
Rue3-1-31	4	6801003	6801004	1	G	core_nonrep	6	1	1
Rue3-1-31	4	6801059	6801060	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	6801397	6801398	1	T	core_nonrep	11	0.9	1
Rue3-1-31	4	6802652	6802653	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6802997	6802998	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	6802998	6802999	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6803893	6803894	1	T	core_nonrep	8	1	1
Rue3-1-31	4	6806776	6806777	1	A	core_nonrep	13	1	1
Rue3-1-31	4	6807007	6807008	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	6818048	6818049	1	C	core_nonrep	8	0.875	1
Rue3-1-31	4	6818253	6818254	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6821340	6821341	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6822901	6822902	1	C	nonrep	3	1	1
Rue3-1-31	4	6823881	6823882	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6825333	6825334	1	T	core_nonrep	4	1	1
Rue3-1-31	4	6825776	6825777	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6831018	6831019	1	T	nonrep	3	1	1
Rue3-1-31	4	6834032	6834033	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	6835409	6835410	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	6837057	6837058	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6850779	6850780	1	G	core_nonrep	3	1	1
Rue3-1-31	4	6852442	6852443	2	AG	core_nonrep	13	1	1
Rue3-1-31	4	6854330	6854331	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6859517	6859518	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	4	6860506	6860507	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6861901	6861902	1	G	nonrep	3	1	1
Rue3-1-31	4	6862254	6862255	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6862539	6862540	1	A	core_nonrep	10	1	1
Rue3-1-31	4	6862780	6862781	1	C	nonrep	6	0.857143	1
Rue3-1-31	4	6863751	6863752	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6865973	6865974	1	A	core_nonrep	6	1	1
Rue3-1-31	4	6870967	6870968	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	6871749	6871750	1	A	core_nonrep	5	1	1
Rue3-1-31	4	6872253	6872254	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	6877246	6877247	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6877271	6877272	1	G	core_nonrep	6	1	1
Rue3-1-31	4	6877274	6877275	1	C	core_nonrep	4	1	1
Rue3-1-31	4	6877836	6877837	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	4	6885054	6885055	1	T	core_nonrep	8	0.8	1
Rue3-1-31	4	6886132	6886133	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6889327	6889328	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	6891468	6891469	2	GT	core_nonrep	12	0.916667	1
Rue3-1-31	4	6892298	6892299	1	A	core_nonrep	16	0.923077	1
Rue3-1-31	4	6894742	6894743	1	G	core_nonrep	9	1	1
Rue3-1-31	4	6894828	6894829	2	TT	nonrep	5	1	1
Rue3-1-31	4	6897668	6897669	1	G	core_nonrep	10	1	1
Rue3-1-31	4	6898600	6898601	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	6901603	6901604	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6903377	6903378	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	4	6905825	6905826	1	T	nonrep	3	1	1
Rue3-1-31	4	6907097	6907098	1	A	nonrep	4	1	1
Rue3-1-31	4	6909429	6909430	1	C	nonrep	3	0.75	1
Rue3-1-31	4	6913967	6913968	1	A	core_nonrep	3	1	1
Rue3-1-31	4	6920716	6920717	1	T	core_nonrep	12	0.857143	1
Rue3-1-31	4	6921126	6921127	1	A	core_nonrep	9	1	1
Rue3-1-31	4	6930103	6930104	1	A	core_nonrep	10	1	1
Rue3-1-31	4	6932327	6932328	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	6932950	6932951	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	6939627	6939628	1	C	core_nonrep	15	1	1
Rue3-1-31	4	6940675	6940676	1	A	core_nonrep	4	1	1
Rue3-1-31	4	6943734	6943735	2	TA	nonrep	3	1	1
Rue3-1-31	4	6945608	6945609	1	T	core_nonrep	8	1	1
Rue3-1-31	4	6947363	6947364	1	A	nonrep	6	0.75	1
Rue3-1-31	4	6949552	6949553	1	A	core_nonrep	8	1	1
Rue3-1-31	4	6952349	6952350	1	G	core_nonrep	18	0.933333	1
Rue3-1-31	4	6955773	6955774	1	C	core_nonrep	14	0.727273	1
Rue3-1-31	4	6957405	6957406	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	6957451	6957452	1	C	core_nonrep	3	1	1
Rue3-1-31	4	6957818	6957819	1	G	core_nonrep	7	1	1
Rue3-1-31	4	6961250	6961251	2	CA	core_nonrep	3	1	1
Rue3-1-31	4	6962114	6962115	1	C	core_nonrep	4	1	1
Rue3-1-31	4	6966394	6966395	1	T	core_nonrep	7	1	1
Rue3-1-31	4	6966633	6966634	1	C	core_nonrep	13	1	1
Rue3-1-31	4	6976709	6976710	1	G	core_nonrep	5	1	1
Rue3-1-31	4	6980953	6980954	1	T	core_nonrep	6	1	1
Rue3-1-31	4	6981209	6981210	2	CC	core_nonrep	5	1	1
Rue3-1-31	4	6982087	6982088	1	T	core_nonrep	5	1	1
Rue3-1-31	4	6985274	6985275	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	6987006	6987007	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	6987115	6987116	1	C	core_nonrep	9	0.875	1
Rue3-1-31	4	6989214	6989215	1	G	core_nonrep	10	1	1
Rue3-1-31	4	6989740	6989741	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6991141	6991142	1	A	core_nonrep	30	1	1.19512
Rue3-1-31	4	6999060	6999061	1	T	core_nonrep	3	1	1
Rue3-1-31	4	6999062	6999063	1	G	core_nonrep	3	1	1
Rue3-1-31	4	7004451	7004452	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7007756	7007757	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	7007757	7007758	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	7008165	7008166	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7008295	7008296	3	TTA	core_nonrep	7	1	1
Rue3-1-31	4	7009925	7009926	2	CA	core_nonrep	12	0.785714	1
Rue3-1-31	4	7010713	7010714	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7011327	7011328	1	C	core_nonrep	7	1	1
Rue3-1-31	4	7013638	7013639	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	7020630	7020631	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7032568	7032569	1	G	core_nonrep	3	1	1
Rue3-1-31	4	7035168	7035169	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	7037788	7037789	1	T	nonrep	4	1	1
Rue3-1-31	4	7038466	7038467	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7042192	7042193	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7060976	7060977	1	A	core_nonrep	7	0.7	1
Rue3-1-31	4	7066787	7066788	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7071656	7071657	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7071666	7071667	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	7071756	7071757	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7073469	7073470	1	A	core_nonrep	9	1	1
Rue3-1-31	4	7081835	7081836	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	4	7085412	7085413	1	G	core_nonrep	7	1	1
Rue3-1-31	4	7087492	7087493	1	A	core_nonrep	8	1	1
Rue3-1-31	4	7089590	7089591	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7090814	7090815	1	T	core_nonrep	10	1	1
Rue3-1-31	4	7095032	7095033	1	A	nonrep	3	0.75	1
Rue3-1-31	4	7095802	7095803	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	4	7097244	7097245	1	T	core_nonrep	9	1	1
Rue3-1-31	4	7098173	7098174	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7098813	7098814	1	C	nonrep	5	0.833333	1
Rue3-1-31	4	7099268	7099269	1	G	core_nonrep	8	1	1
Rue3-1-31	4	7099297	7099298	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7099713	7099714	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	7101062	7101063	2	GA	core_nonrep	9	0.8	1
Rue3-1-31	4	7101209	7101210	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	7101210	7101211	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7104369	7104370	3	CTT	core_nonrep	5	1	1
Rue3-1-31	4	7105149	7105150	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7112186	7112187	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	7113745	7113746	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7127924	7127925	1	A	core_nonrep	11	0.9	1
Rue3-1-31	4	7141512	7141513	1	T	core_nonrep	7	1	1
Rue3-1-31	4	7142527	7142528	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	7147228	7147229	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7147330	7147331	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7148244	7148245	1	T	core_nonrep	7	0.75	1
Rue3-1-31	4	7157018	7157019	1	T	core_nonrep	7	0.8	1
Rue3-1-31	4	7160675	7160676	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7163855	7163856	1	A	nonrep	5	1	1
Rue3-1-31	4	7166338	7166339	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7167910	7167911	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7167986	7167987	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7169970	7169971	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	4	7171530	7171531	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7174599	7174600	2	AA	nonrep	7	0.875	1
Rue3-1-31	4	7175163	7175164	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7175164	7175165	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	7175767	7175768	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7186201	7186202	1	C	core_nonrep	8	1	1
Rue3-1-31	4	7186234	7186235	1	A	core_nonrep	8	1	1
Rue3-1-31	4	7186241	7186242	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	7186651	7186652	1	A	core_nonrep	10	1	1
Rue3-1-31	4	7187158	7187159	2	GT	nonrep	6	0.75	1
Rue3-1-31	4	7189258	7189259	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7192512	7192513	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7192635	7192636	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7193709	7193710	1	G	core_nonrep	4	1	1
Rue3-1-31	4	7195233	7195234	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7196792	7196793	1	A	core_nonrep	10	1	1
Rue3-1-31	4	7206416	7206417	1	T	core_nonrep	23	0.916667	1
Rue3-1-31	4	7206419	7206420	1	G	core_nonrep	23	0.769231	1
Rue3-1-31	4	7208564	7208565	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	7210746	7210747	1	T	core_nonrep	7	1	1
Rue3-1-31	4	7213267	7213268	1	G	core_nonrep	8	1	1
Rue3-1-31	4	7213397	7213398	1	A	core_nonrep	7	1	1
Rue3-1-31	4	7213496	7213497	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7214883	7214884	1	G	core_nonrep	8	1	1
Rue3-1-31	4	7215327	7215328	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	7223800	7223801	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7223984	7223985	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	7226262	7226263	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7227724	7227725	3	TTC	core_nonrep	5	0.833333	1
Rue3-1-31	4	7231605	7231606	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7232391	7232392	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	4	7234293	7234294	1	A	core_nonrep	9	0.9	1
Rue3-1-31	4	7241239	7241240	1	A	core_nonrep	14	1	1
Rue3-1-31	4	7241242	7241243	1	G	core_nonrep	17	0.928571	1
Rue3-1-31	4	7241828	7241829	1	A	core_nonrep	7	1	1
Rue3-1-31	4	7244123	7244124	1	C	core_nonrep	7	1	1
Rue3-1-31	4	7246327	7246328	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7266217	7266218	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	7271627	7271628	2	TG	core_nonrep	7	0.75	1
Rue3-1-31	4	7271711	7271712	1	C	core_nonrep	16	0.875	1
Rue3-1-31	4	7274564	7274565	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7277600	7277601	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7278037	7278038	1	T	core_nonrep	7	0.833333	1.6
Rue3-1-31	4	7282109	7282110	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7283201	7283202	1	G	core_nonrep	12	1	1
Rue3-1-31	4	7292504	7292505	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7293781	7293782	1	T	core_nonrep	7	0.75	1
Rue3-1-31	4	7296185	7296186	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7302081	7302082	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	4	7303533	7303534	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7305991	7305992	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7306680	7306681	1	A	core_nonrep	10	1	1
Rue3-1-31	4	7324814	7324815	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7324950	7324951	1	G	core_nonrep	11	0.833333	1
Rue3-1-31	4	7330538	7330539	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7331541	7331542	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7335457	7335458	1	A	core_nonrep	7	1	1
Rue3-1-31	4	7338803	7338804	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	7339183	7339184	1	G	core_nonrep	21	1	1
Rue3-1-31	4	7342841	7342842	1	A	nonrep	3	0.75	1
Rue3-1-31	4	7345508	7345509	1	T	core_nonrep	7	1	1
Rue3-1-31	4	7346872	7346873	1	T	nonrep	7	0.875	1
Rue3-1-31	4	7348536	7348537	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7350996	7350997	1	T	core_nonrep	10	1	1
Rue3-1-31	4	7352629	7352630	1	G	core_nonrep	6	1	1
Rue3-1-31	4	7354081	7354082	2	TG	core_nonrep	5	0.833333	1
Rue3-1-31	4	7365428	7365429	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	7367416	7367417	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	4	7368688	7368689	1	A	core_nonrep	9	1	1
Rue3-1-31	4	7374455	7374456	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	7375133	7375134	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7375151	7375152	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7375230	7375231	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7375267	7375268	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7375354	7375355	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7375372	7375373	1	T	core_nonrep	8	0.8	1
Rue3-1-31	4	7379488	7379489	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7385561	7385562	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7388230	7388231	1	C	core_nonrep	3	1	1
Rue3-1-31	4	7389613	7389614	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7399572	7399573	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7417999	7418000	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	7418168	7418169	1	T	core	3	0.75	1.22222
Rue3-1-31	4	7429511	7429512	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7436336	7436337	1	G	nonrep	3	0.75	1
Rue3-1-31	4	7448875	7448876	1	C	core_nonrep	10	1	1
Rue3-1-31	4	7449096	7449097	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7449097	7449098	2	CT	core_nonrep	3	1	1
Rue3-1-31	4	7449906	7449907	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7453908	7453909	1	G	core_nonrep	11	0.909091	1
Rue3-1-31	4	7455205	7455206	1	G	core_nonrep	8	1	1
Rue3-1-31	4	7455641	7455642	1	T	core_nonrep	13	1	1
Rue3-1-31	4	7457815	7457816	1	T	core_nonrep	9	0.875	1
Rue3-1-31	4	7478726	7478727	1	G	core_nonrep	12	1	1
Rue3-1-31	4	7479710	7479711	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7491548	7491549	2	AA	core_nonrep	7	0.875	1
Rue3-1-31	4	7494269	7494270	3	GAA	core_nonrep	6	0.857143	1
Rue3-1-31	4	7494649	7494650	1	A	core_nonrep	10	1	1
Rue3-1-31	4	7494869	7494870	1	C	core_nonrep	12	0.8	1
Rue3-1-31	4	7513618	7513619	1	A	nonrep	4	0.8	1
Rue3-1-31	4	7524280	7524281	1	G	core_nonrep	5	1	1
Rue3-1-31	4	7524595	7524596	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7530314	7530315	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	7534371	7534372	1	G	core_nonrep	8	1	1
Rue3-1-31	4	7550632	7550633	1	A	core_nonrep	11	1	1
Rue3-1-31	4	7559823	7559824	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7561210	7561211	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7563429	7563430	1	A	core_nonrep	11	1	1
Rue3-1-31	4	7564033	7564034	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7568236	7568237	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7571045	7571046	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	7573960	7573961	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7573961	7573962	1	C	core_nonrep	5	1	1
Rue3-1-31	4	7581729	7581730	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7585058	7585059	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7585196	7585197	2	AA	core_nonrep	6	1	1
Rue3-1-31	4	7586022	7586023	1	A	core_nonrep	8	1	1
Rue3-1-31	4	7586238	7586239	2	TA	core_nonrep	6	0.833333	1
Rue3-1-31	4	7588016	7588017	1	T	core_nonrep	11	1	1
Rue3-1-31	4	7600607	7600608	2	GA	core_nonrep	8	0.875	1
Rue3-1-31	4	7600788	7600789	1	A	core_nonrep	10	1	1
Rue3-1-31	4	7601867	7601868	1	G	core_nonrep	10	0.9	1
Rue3-1-31	4	7603161	7603162	1	C	nonrep	3	0.75	1
Rue3-1-31	4	7603162	7603163	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7603467	7603468	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	4	7603901	7603902	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	7604512	7604513	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	7608687	7608688	1	G	core_nonrep	6	0.75	1
Rue3-1-31	4	7613488	7613489	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7613501	7613502	1	C	nonrep	7	1	1
Rue3-1-31	4	7623618	7623619	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7627132	7627133	1	A	nonrep	3	1	1
Rue3-1-31	4	7631151	7631152	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	4	7631152	7631153	1	C	core_nonrep	12	1	1
Rue3-1-31	4	7632900	7632901	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7632901	7632902	1	G	core_nonrep	3	1	1
Rue3-1-31	4	7634873	7634874	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7636886	7636887	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	7638043	7638044	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7638278	7638279	1	G	core_nonrep	4	1	1
Rue3-1-31	4	7640286	7640287	1	A	nonrep	3	1	1
Rue3-1-31	4	7644374	7644375	1	C	core_nonrep	13	0.9	1
Rue3-1-31	4	7660294	7660295	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7660295	7660296	2	GA	core_nonrep	5	1	1
Rue3-1-31	4	7665695	7665696	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7668710	7668711	1	T	core_nonrep	10	1	1
Rue3-1-31	4	7670143	7670144	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	4	7676356	7676357	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	7676359	7676360	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	7678830	7678831	1	A	nonrep	3	1	1
Rue3-1-31	4	7678990	7678991	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	7679039	7679040	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	7679891	7679892	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7683274	7683275	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7683396	7683397	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7683400	7683401	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7683405	7683406	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7684147	7684148	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7687907	7687908	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	7712349	7712350	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7713544	7713545	1	C	core_nonrep	10	1	1.16667
Rue3-1-31	4	7717887	7717888	1	A	core_nonrep	9	1	1
Rue3-1-31	4	7722034	7722035	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	4	7735412	7735413	1	T	nonrep	3	0.75	1
Rue3-1-31	4	7735413	7735414	1	C	core_nonrep	3	1	1
Rue3-1-31	4	7739851	7739852	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	4	7740136	7740137	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7744889	7744890	1	C	core_nonrep	10	0.9	1.07143
Rue3-1-31	4	7746645	7746646	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7748147	7748148	1	G	core_nonrep	3	1	1
Rue3-1-31	4	7748746	7748747	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7749043	7749044	1	C	core_nonrep	5	1	1
Rue3-1-31	4	7749262	7749263	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7749288	7749289	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7750307	7750308	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7757566	7757567	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7761530	7761531	1	C	nonrep	3	1	1
Rue3-1-31	4	7765137	7765138	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	4	7765214	7765215	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7767639	7767640	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7768817	7768818	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7769940	7769941	1	C	nonrep	3	1	1
Rue3-1-31	4	7772874	7772875	1	T	core_nonrep	11	1	1
Rue3-1-31	4	7775985	7775986	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7780441	7780442	2	TT	core_nonrep	7	1	1
Rue3-1-31	4	7786278	7786279	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	7796893	7796894	1	G	core_nonrep	3	1	1
Rue3-1-31	4	7800625	7800626	1	T	core_nonrep	7	1	1
Rue3-1-31	4	7800913	7800914	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7803293	7803294	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7808348	7808349	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7814484	7814485	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7815318	7815319	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7815381	7815382	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	7822807	7822808	1	T	core_nonrep	6	1	1
Rue3-1-31	4	7823506	7823507	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7823510	7823511	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	7826833	7826834	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	7830236	7830237	1	C	core_nonrep	3	0.75	1
Rue3-1-31	4	7834070	7834071	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7836438	7836439	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7838057	7838058	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	7839113	7839114	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	4	7840097	7840098	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	7840457	7840458	2	AA	core_nonrep	8	1	1
Rue3-1-31	4	7841284	7841285	1	G	core_nonrep	5	0.75	1
Rue3-1-31	4	7841285	7841286	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	7842064	7842065	2	GC	core_nonrep	6	0.833333	1
Rue3-1-31	4	7843334	7843335	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	7843644	7843645	1	G	core_nonrep	9	1	1
Rue3-1-31	4	7844267	7844268	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7848613	7848614	2	AA	core_nonrep	7	1	1
Rue3-1-31	4	7850517	7850518	3	TGT	core_nonrep	6	0.857143	1
Rue3-1-31	4	7856672	7856673	1	A	core_nonrep	6	1	1
Rue3-1-31	4	7856963	7856964	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	7860442	7860443	1	A	core_nonrep	9	1	1
Rue3-1-31	4	7861622	7861623	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7861996	7861997	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	7862611	7862612	1	T	core_nonrep	9	1	1
Rue3-1-31	4	7863319	7863320	1	C	core_nonrep	6	1	1
Rue3-1-31	4	7864868	7864869	1	G	core_nonrep	5	1	1
Rue3-1-31	4	7864891	7864892	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7866752	7866753	3	TTT	core_nonrep	19	0.941176	1
Rue3-1-31	4	7871501	7871502	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	4	7881244	7881245	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7883291	7883292	1	T	core_nonrep	4	1	1.125
Rue3-1-31	4	7884943	7884944	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	7889681	7889682	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	4	7891535	7891536	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	7892859	7892860	1	C	core_nonrep	4	1	1
Rue3-1-31	4	7893173	7893174	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7894325	7894326	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7896550	7896551	1	C	nonrep	3	1	1
Rue3-1-31	4	7896675	7896676	1	T	nonrep	3	1	1
Rue3-1-31	4	7903919	7903920	1	G	core_nonrep	9	0.75	1
Rue3-1-31	4	7903921	7903922	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	4	7904301	7904302	1	G	core_nonrep	6	1	1
Rue3-1-31	4	7904733	7904734	1	A	core_nonrep	7	1	1
Rue3-1-31	4	7907030	7907031	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	7907691	7907692	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7914509	7914510	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	7916223	7916224	1	G	core_nonrep	8	0.75	1
Rue3-1-31	4	7918988	7918989	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7921746	7921747	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7922333	7922334	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7923610	7923611	1	G	core_nonrep	16	1	1
Rue3-1-31	4	7924233	7924234	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	4	7926227	7926228	1	A	core_nonrep	3	1	1
Rue3-1-31	4	7927420	7927421	1	T	core_nonrep	4	1	1
Rue3-1-31	4	7928905	7928906	1	G	core_nonrep	5	1	1
Rue3-1-31	4	7933539	7933540	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7934134	7934135	1	A	core_nonrep	18	0.9375	1
Rue3-1-31	4	7936318	7936319	1	A	core_nonrep	7	1	1
Rue3-1-31	4	7943862	7943863	1	T	core_nonrep	7	1	1
Rue3-1-31	4	7946993	7946994	1	A	core_nonrep	5	1	1
Rue3-1-31	4	7947856	7947857	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7947874	7947875	1	T	core_nonrep	5	1	1
Rue3-1-31	4	7947925	7947926	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	7948027	7948028	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7953396	7953397	2	AA	core_nonrep	11	0.916667	1
Rue3-1-31	4	7955389	7955390	1	T	core_nonrep	8	1	1
Rue3-1-31	4	7959184	7959185	1	A	core_nonrep	4	1	1
Rue3-1-31	4	7960777	7960778	1	G	core_nonrep	6	1	1
Rue3-1-31	4	7984573	7984574	1	T	core_nonrep	3	1	1
Rue3-1-31	4	7997333	7997334	1	C	core_nonrep	21	1	1
Rue3-1-31	4	8001980	8001981	1	A	core_nonrep	8	0.7	1
Rue3-1-31	4	8013966	8013967	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8015480	8015481	1	G	core_nonrep	6	1	1
Rue3-1-31	4	8015847	8015848	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8020527	8020528	1	C	core_nonrep	4	1	1
Rue3-1-31	4	8021503	8021504	1	T	core_nonrep	9	0.8	1
Rue3-1-31	4	8023413	8023414	1	G	core_nonrep	14	0.923077	1.06667
Rue3-1-31	4	8024751	8024752	1	C	core_nonrep	3	1	1
Rue3-1-31	4	8026025	8026026	1	A	core_nonrep	14	1	1
Rue3-1-31	4	8026888	8026889	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	8030309	8030310	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8030360	8030361	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8034623	8034624	1	G	core_nonrep	11	1	1
Rue3-1-31	4	8034684	8034685	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8035001	8035002	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8035200	8035201	1	G	core_nonrep	7	1	1
Rue3-1-31	4	8041615	8041616	1	T	core_nonrep	9	1	1
Rue3-1-31	4	8043696	8043697	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	4	8043835	8043836	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8047232	8047233	2	CT	core_nonrep	6	1	1
Rue3-1-31	4	8051300	8051301	1	C	core_nonrep	3	1	1
Rue3-1-31	4	8051529	8051530	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8051530	8051531	2	GC	core_nonrep	5	0.8	1
Rue3-1-31	4	8058889	8058890	1	C	core_nonrep	7	1	1
Rue3-1-31	4	8063082	8063083	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8063452	8063453	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8068462	8068463	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8069299	8069300	1	A	nonrep	3	1	1
Rue3-1-31	4	8069353	8069354	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8069372	8069373	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8069526	8069527	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8078926	8078927	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	4	8090098	8090099	1	A	core_nonrep	7	0.857143	1.09091
Rue3-1-31	4	8092773	8092774	1	A	core_nonrep	10	1	1
Rue3-1-31	4	8099298	8099299	1	A	core_nonrep	9	1	1
Rue3-1-31	4	8099606	8099607	1	T	core_nonrep	8	1	1
Rue3-1-31	4	8099634	8099635	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8099647	8099648	2	AG	core_nonrep	4	0.8	1
Rue3-1-31	4	8099989	8099990	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	8100666	8100667	2	CT	core_nonrep	8	0.8	1
Rue3-1-31	4	8107174	8107175	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	8108924	8108925	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8111536	8111537	1	C	core_nonrep	4	1	1
Rue3-1-31	4	8111582	8111583	1	C	core_nonrep	9	1	1
Rue3-1-31	4	8111821	8111822	2	AG	core_nonrep	4	1	1
Rue3-1-31	4	8114143	8114144	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8114193	8114194	1	G	core_nonrep	4	1	1
Rue3-1-31	4	8115164	8115165	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	4	8115602	8115603	3	AAG	core_nonrep	5	0.8	1
Rue3-1-31	4	8118047	8118048	2	GA	core_nonrep	8	0.8	1
Rue3-1-31	4	8120306	8120307	1	T	core_nonrep	13	1	1
Rue3-1-31	4	8120553	8120554	1	A	nonrep	4	0.8	1
Rue3-1-31	4	8120558	8120559	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8120614	8120615	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	8120618	8120619	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8121779	8121780	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8139822	8139823	1	C	core_nonrep	4	1	1
Rue3-1-31	4	8141233	8141234	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	8141240	8141241	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8141437	8141438	2	AT	core_nonrep	6	1	1
Rue3-1-31	4	8143987	8143988	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8151967	8151968	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8155390	8155391	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	4	8166045	8166046	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	8175595	8175596	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	4	8176117	8176118	2	AG	core_nonrep	6	0.857143	1
Rue3-1-31	4	8189455	8189456	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8189509	8189510	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8196236	8196237	2	AT	core_nonrep	8	0.875	1
Rue3-1-31	4	8210080	8210081	1	C	core_nonrep	18	1	1
Rue3-1-31	4	8213823	8213824	2	AC	core_nonrep	10	1	1
Rue3-1-31	4	8234231	8234232	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	4	8243937	8243938	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8248011	8248012	2	TT	core_nonrep	7	1	1
Rue3-1-31	4	8249034	8249035	1	A	core_nonrep	12	0.785714	1
Rue3-1-31	4	8252625	8252626	1	G	core_nonrep	6	1	1
Rue3-1-31	4	8255568	8255569	1	A	core_nonrep	9	1	1
Rue3-1-31	4	8258271	8258272	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8258752	8258753	1	T	core_nonrep	8	1	1
Rue3-1-31	4	8259680	8259681	1	A	core_nonrep	8	1	1
Rue3-1-31	4	8260781	8260782	3	TCT	nonrep	3	0.75	1
Rue3-1-31	4	8272502	8272503	1	A	core_nonrep	11	1	1
Rue3-1-31	4	8283714	8283715	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8283804	8283805	1	G	core_nonrep	4	1	1
Rue3-1-31	4	8284025	8284026	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8287443	8287444	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8288202	8288203	1	C	core_nonrep	9	1	1
Rue3-1-31	4	8288261	8288262	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8288740	8288741	1	G	core_nonrep	6	1	1
Rue3-1-31	4	8289226	8289227	1	G	core_nonrep	8	1	1
Rue3-1-31	4	8294472	8294473	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8299587	8299588	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	8308053	8308054	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8308207	8308208	1	C	nonrep	3	1	1
Rue3-1-31	4	8308604	8308605	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8309520	8309521	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8309551	8309552	1	G	core_nonrep	7	0.875	1
Rue3-1-31	4	8310191	8310192	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8320217	8320218	1	C	core_nonrep	6	1	1
Rue3-1-31	4	8323283	8323284	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8326668	8326669	1	C	core_nonrep	5	1	1
Rue3-1-31	4	8333880	8333881	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	8334360	8334361	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	8346978	8346979	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8351682	8351683	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8355805	8355806	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8357338	8357339	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8358203	8358204	1	T	core_nonrep	8	1	1
Rue3-1-31	4	8358686	8358687	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8363232	8363233	2	TG	core_nonrep	11	0.833333	1
Rue3-1-31	4	8370469	8370470	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	8370871	8370872	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	8372519	8372520	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	8373713	8373714	1	T	nonrep	6	0.857143	1
Rue3-1-31	4	8373806	8373807	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	4	8373809	8373810	2	TT	core_nonrep	6	1	1
Rue3-1-31	4	8374271	8374272	1	A	nonrep	3	1	1
Rue3-1-31	4	8378370	8378371	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	4	8378372	8378373	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	4	8378425	8378426	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8378554	8378555	1	A	core_nonrep	10	1	1
Rue3-1-31	4	8378775	8378776	1	G	core_nonrep	10	1	1
Rue3-1-31	4	8378776	8378777	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	8380563	8380564	1	T	core_nonrep	9	1	1
Rue3-1-31	4	8380846	8380847	1	T	core_nonrep	12	1	1
Rue3-1-31	4	8381610	8381611	1	A	core_nonrep	9	1	1
Rue3-1-31	4	8383554	8383555	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8385612	8385613	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8389137	8389138	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8389190	8389191	1	C	core_nonrep	7	1	1
Rue3-1-31	4	8416011	8416012	1	A	core_nonrep	18	1	1
Rue3-1-31	4	8416323	8416324	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	8435576	8435577	3	TTT	core_nonrep	6	0.857143	1
Rue3-1-31	4	8435800	8435801	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	8440686	8440687	1	A	core_nonrep	10	0.777778	1
Rue3-1-31	4	8444087	8444088	1	T	core_nonrep	11	1	1
Rue3-1-31	4	8445972	8445973	1	G	core_nonrep	8	1	1
Rue3-1-31	4	8459701	8459702	1	A	core	5	0.8	1.16667
Rue3-1-31	4	8461461	8461462	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	8473275	8473276	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	4	8474962	8474963	1	G	core_nonrep	4	1	1
Rue3-1-31	4	8475521	8475522	1	A	core_nonrep	8	1	1
Rue3-1-31	4	8481346	8481347	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8485366	8485367	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	8485428	8485429	2	TA	nonrep	4	1	1
Rue3-1-31	4	8485471	8485472	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	8486824	8486825	1	A	nonrep	3	1	1
Rue3-1-31	4	8486884	8486885	1	A	nonrep	3	0.75	1
Rue3-1-31	4	8486894	8486895	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	8487077	8487078	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8490400	8490401	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	4	8491652	8491653	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	8494621	8494622	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	8495730	8495731	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8495807	8495808	1	A	core_nonrep	10	1	1
Rue3-1-31	4	8518715	8518716	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8525380	8525381	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	8525381	8525382	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	8530195	8530196	1	T	core_nonrep	9	0.9	1
Rue3-1-31	4	8530825	8530826	1	T	core_nonrep	12	1	1
Rue3-1-31	4	8536849	8536850	1	A	nonrep	4	1	1
Rue3-1-31	4	8537626	8537627	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	4	8546246	8546247	1	G	core_nonrep	6	1	1
Rue3-1-31	4	8548103	8548104	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	8550340	8550341	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8550587	8550588	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	8552037	8552038	1	G	core_nonrep	9	0.818182	1
Rue3-1-31	4	8553187	8553188	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8555340	8555341	1	G	core_nonrep	9	1	1
Rue3-1-31	4	8556936	8556937	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8557079	8557080	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8558659	8558660	1	C	core_nonrep	4	0.75	1
Rue3-1-31	4	8559233	8559234	1	T	core_nonrep	11	1	1
Rue3-1-31	4	8559297	8559298	1	G	core_nonrep	8	1	1
Rue3-1-31	4	8563436	8563437	1	G	core_nonrep	13	0.9	1
Rue3-1-31	4	8564154	8564155	1	G	core_nonrep	6	1	1
Rue3-1-31	4	8564963	8564964	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8568665	8568666	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	8571463	8571464	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8571525	8571526	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8571767	8571768	1	G	core_nonrep	9	0.777778	1
Rue3-1-31	4	8575594	8575595	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8575955	8575956	1	A	core_nonrep	16	1	1
Rue3-1-31	4	8576987	8576988	1	A	core_nonrep	12	1	1
Rue3-1-31	4	8577375	8577376	1	G	core_nonrep	10	1	1
Rue3-1-31	4	8577642	8577643	1	T	core_nonrep	14	1	1
Rue3-1-31	4	8577747	8577748	1	A	core_nonrep	22	0.833333	1
Rue3-1-31	4	8577793	8577794	1	A	core_nonrep	20	0.928571	1
Rue3-1-31	4	8579417	8579418	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	8579421	8579422	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8579424	8579425	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8582122	8582123	1	T	core_nonrep	22	0.9375	1
Rue3-1-31	4	8582172	8582173	1	A	core_nonrep	16	1	1
Rue3-1-31	4	8582284	8582285	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	4	8582285	8582286	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8582398	8582399	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	8582745	8582746	1	G	core_nonrep	5	1	1
Rue3-1-31	4	8584226	8584227	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	4	8585382	8585383	1	G	core_nonrep	4	1	1
Rue3-1-31	4	8591710	8591711	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8593614	8593615	1	A	core	5	1	1.2
Rue3-1-31	4	8595507	8595508	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8608685	8608686	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8608686	8608687	1	C	core_nonrep	8	1	1
Rue3-1-31	4	8613890	8613891	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8618269	8618270	2	AT	core_nonrep	3	1	1
Rue3-1-31	4	8628563	8628564	1	T	core_nonrep	12	1	1
Rue3-1-31	4	8634473	8634474	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8635729	8635730	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8635882	8635883	2	CT	core_nonrep	5	1	1
Rue3-1-31	4	8635898	8635899	1	T	nonrep	3	0.75	1
Rue3-1-31	4	8635950	8635951	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8637694	8637695	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8640946	8640947	1	C	core_nonrep	7	1	1
Rue3-1-31	4	8640970	8640971	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8641652	8641653	1	C	core_nonrep	16	0.923077	1
Rue3-1-31	4	8641674	8641675	1	C	core_nonrep	14	1	1
Rue3-1-31	4	8641680	8641681	1	T	core_nonrep	10	0.75	1
Rue3-1-31	4	8642093	8642094	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8642520	8642521	1	G	core_nonrep	8	1	1
Rue3-1-31	4	8643037	8643038	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8644527	8644528	3	TAC	core_nonrep	4	1	1
Rue3-1-31	4	8645571	8645572	1	A	core_nonrep	14	0.923077	1
Rue3-1-31	4	8645768	8645769	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8645965	8645966	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8650060	8650061	1	G	core_nonrep	15	0.928571	1
Rue3-1-31	4	8650070	8650071	1	G	core_nonrep	16	1	1
Rue3-1-31	4	8650320	8650321	1	A	core_nonrep	11	0.818182	1
Rue3-1-31	4	8650381	8650382	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	8651076	8651077	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8654035	8654036	1	C	core_nonrep	12	1	1
Rue3-1-31	4	8655013	8655014	1	A	core_nonrep	17	0.882353	1
Rue3-1-31	4	8657623	8657624	2	TT	core_nonrep	9	0.888889	1
Rue3-1-31	4	8663538	8663539	1	C	core_nonrep	25	1	1
Rue3-1-31	4	8664043	8664044	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	8674111	8674112	1	T	core_nonrep	6	1	1
Rue3-1-31	4	8695142	8695143	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8707326	8707327	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8707353	8707354	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8709517	8709518	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8710552	8710553	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	4	8715375	8715376	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8715535	8715536	1	C	core_nonrep	4	1	1
Rue3-1-31	4	8716194	8716195	1	T	core_nonrep	8	1	1
Rue3-1-31	4	8720989	8720990	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8721362	8721363	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8723914	8723915	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	8727954	8727955	1	T	core_nonrep	14	1	1
Rue3-1-31	4	8737866	8737867	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	8739943	8739944	1	T	core_nonrep	7	1	1
Rue3-1-31	4	8740457	8740458	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	4	8746454	8746455	1	G	core_nonrep	4	1	1
Rue3-1-31	4	8747651	8747652	1	T	nonrep	3	0.75	1
Rue3-1-31	4	8748710	8748711	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	8754087	8754088	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	8757063	8757064	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8758701	8758702	1	C	core_nonrep	6	1	1
Rue3-1-31	4	8761207	8761208	3	AAA	core_nonrep	3	0.75	1
Rue3-1-31	4	8762902	8762903	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	8765493	8765494	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8766926	8766927	1	A	nonrep	3	1	1
Rue3-1-31	4	8767377	8767378	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8768019	8768020	2	TC	core_nonrep	3	1	1
Rue3-1-31	4	8769652	8769653	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8769667	8769668	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8769931	8769932	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	8771773	8771774	1	G	core_nonrep	11	0.75	1
Rue3-1-31	4	8772471	8772472	1	C	core_nonrep	8	1	1
Rue3-1-31	4	8772474	8772475	1	T	core_nonrep	8	1	1
Rue3-1-31	4	8773041	8773042	1	A	nonrep	3	0.75	1
Rue3-1-31	4	8773046	8773047	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8773065	8773066	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	4	8775786	8775787	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8776730	8776731	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8780545	8780546	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8781150	8781151	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8781403	8781404	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8781997	8781998	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	8784722	8784723	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8790399	8790400	2	AT	core_nonrep	6	0.857143	1
Rue3-1-31	4	8790773	8790774	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	8791272	8791273	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	8792833	8792834	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8795980	8795981	2	AA	core_nonrep	5	0.75	1
Rue3-1-31	4	8801530	8801531	1	A	core_nonrep	3	1	1
Rue3-1-31	4	8805699	8805700	2	GC	core_nonrep	9	1	1
Rue3-1-31	4	8811733	8811734	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8814558	8814559	1	A	core_nonrep	7	1	1
Rue3-1-31	4	8826160	8826161	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8827792	8827793	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	8829017	8829018	1	C	core_nonrep	5	1	1
Rue3-1-31	4	8829542	8829543	1	G	core_nonrep	11	1	1
Rue3-1-31	4	8831458	8831459	1	G	core_nonrep	6	0.75	1
Rue3-1-31	4	8840905	8840906	1	A	core_nonrep	15	1	1
Rue3-1-31	4	8855118	8855119	1	T	core_nonrep	7	0.7	1
Rue3-1-31	4	8855494	8855495	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8855608	8855609	1	A	nonrep	3	0.75	1
Rue3-1-31	4	8859293	8859294	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8859305	8859306	1	C	core_nonrep	6	1	1
Rue3-1-31	4	8867034	8867035	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8868750	8868751	1	A	core_nonrep	9	1	1
Rue3-1-31	4	8868756	8868757	1	G	core_nonrep	9	0.9	1
Rue3-1-31	4	8868757	8868758	1	G	core_nonrep	9	1	1
Rue3-1-31	4	8872343	8872344	1	T	nonrep	3	1	1
Rue3-1-31	4	8875906	8875907	1	A	core_nonrep	9	0.818182	1
Rue3-1-31	4	8879555	8879556	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	8882342	8882343	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8883163	8883164	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8891251	8891252	1	A	core_nonrep	8	1	1
Rue3-1-31	4	8891518	8891519	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	8892883	8892884	1	C	core_nonrep	9	1	1
Rue3-1-31	4	8893565	8893566	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8894129	8894130	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	8900159	8900160	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8900684	8900685	1	C	core_nonrep	10	0.9	1
Rue3-1-31	4	8908622	8908623	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	8913006	8913007	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8924341	8924342	2	TG	core_nonrep	12	0.769231	1
Rue3-1-31	4	8924582	8924583	1	G	core_nonrep	9	0.818182	1
Rue3-1-31	4	8925653	8925654	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	8926398	8926399	1	C	core_nonrep	5	1	1
Rue3-1-31	4	8926983	8926984	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8927569	8927570	1	A	core_nonrep	9	0.75	1
Rue3-1-31	4	8927700	8927701	1	T	core_nonrep	5	1	1
Rue3-1-31	4	8932975	8932976	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	4	8934879	8934880	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8936930	8936931	1	T	core_nonrep	4	1	1
Rue3-1-31	4	8937075	8937076	2	AT	core_nonrep	3	1	1
Rue3-1-31	4	8937134	8937135	1	G	core_nonrep	8	0.75	1
Rue3-1-31	4	8940200	8940201	1	G	core_nonrep	5	1	1
Rue3-1-31	4	8942559	8942560	1	A	core_nonrep	9	1	1
Rue3-1-31	4	8943813	8943814	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	8943961	8943962	1	T	core_nonrep	3	1	1
Rue3-1-31	4	8947821	8947822	1	A	nonrep	4	0.8	1
Rue3-1-31	4	8948851	8948852	1	A	core_nonrep	5	1	1
Rue3-1-31	4	8948918	8948919	1	T	nonrep	3	0.75	1
Rue3-1-31	4	8961481	8961482	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8962437	8962438	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8962890	8962891	1	A	core_nonrep	4	1	1
Rue3-1-31	4	8964738	8964739	1	T	nonrep	3	1	1
Rue3-1-31	4	8977334	8977335	1	T	core_nonrep	10	1	1
Rue3-1-31	4	8977988	8977989	1	A	nonrep	5	0.714286	1
Rue3-1-31	4	8978261	8978262	1	C	core_nonrep	17	0.9375	1
Rue3-1-31	4	8978278	8978279	1	C	core_nonrep	13	0.818182	1
Rue3-1-31	4	8985590	8985591	1	A	core_nonrep	6	1	1
Rue3-1-31	4	8986087	8986088	1	A	core_nonrep	7	0.7	1
Rue3-1-31	4	8987834	8987835	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	8988013	8988014	1	T	nonrep	3	0.75	1
Rue3-1-31	4	8988224	8988225	1	A	core_nonrep	8	1	1
Rue3-1-31	4	8988428	8988429	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	4	8988429	8988430	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	4	8988430	8988431	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	4	8990049	8990050	1	A	core_nonrep	14	1	1
Rue3-1-31	4	8990833	8990834	1	C	core_nonrep	15	1	1
Rue3-1-31	4	8991902	8991903	1	C	core_nonrep	19	0.882353	1
Rue3-1-31	4	8992003	8992004	1	C	core_nonrep	14	1	1
Rue3-1-31	4	8992219	8992220	1	A	core_nonrep	18	0.9375	1
Rue3-1-31	4	8993100	8993101	1	C	core_nonrep	9	0.875	1
Rue3-1-31	4	8993112	8993113	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	8993118	8993119	1	A	core_nonrep	7	0.75	1
Rue3-1-31	4	8993162	8993163	1	C	core_nonrep	9	1	1
Rue3-1-31	4	9001915	9001916	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9013955	9013956	1	C	core_nonrep	14	1	1
Rue3-1-31	4	9014307	9014308	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9015974	9015975	1	T	core_nonrep	9	1	1
Rue3-1-31	4	9023189	9023190	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9024880	9024881	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	4	9028465	9028466	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9028592	9028593	1	T	core_nonrep	10	1	1
Rue3-1-31	4	9028712	9028713	1	C	core_nonrep	9	1	1
Rue3-1-31	4	9029797	9029798	1	C	core_nonrep	9	0.875	1
Rue3-1-31	4	9030741	9030742	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	9031277	9031278	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9031656	9031657	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	9034829	9034830	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	9037227	9037228	2	TT	core_nonrep	9	1	1
Rue3-1-31	4	9037269	9037270	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	4	9039459	9039460	1	G	core_nonrep	18	0.9375	1
Rue3-1-31	4	9039597	9039598	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9039966	9039967	3	GAA	core_nonrep	5	0.8	1
Rue3-1-31	4	9040667	9040668	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9041573	9041574	1	T	core_nonrep	16	0.923077	1.19048
Rue3-1-31	4	9042763	9042764	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9042887	9042888	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	9044640	9044641	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9044864	9044865	1	T	core_nonrep	16	1	1
Rue3-1-31	4	9046803	9046804	1	T	core_nonrep	22	1	1
Rue3-1-31	4	9047677	9047678	1	C	core_nonrep	11	1	1
Rue3-1-31	4	9048127	9048128	1	C	core_nonrep	4	1	1
Rue3-1-31	4	9048129	9048130	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9048359	9048360	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9049394	9049395	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9049395	9049396	1	G	core_nonrep	3	1	1
Rue3-1-31	4	9049426	9049427	1	G	core_nonrep	5	1	1
Rue3-1-31	4	9049428	9049429	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	9049430	9049431	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	9051229	9051230	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9051697	9051698	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9052007	9052008	1	A	nonrep	3	1	1
Rue3-1-31	4	9052258	9052259	1	C	core_nonrep	7	1	1
Rue3-1-31	4	9053098	9053099	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9053534	9053535	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	9054435	9054436	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9054494	9054495	1	T	nonrep	3	0.75	1
Rue3-1-31	4	9054541	9054542	1	A	nonrep	4	1	1
Rue3-1-31	4	9063145	9063146	2	GG	core_nonrep	3	1	1
Rue3-1-31	4	9063629	9063630	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9064779	9064780	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	9065449	9065450	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9067750	9067751	1	A	nonrep	3	1	1
Rue3-1-31	4	9081068	9081069	1	G	core_nonrep	12	1	1
Rue3-1-31	4	9081069	9081070	1	A	core_nonrep	12	1	1
Rue3-1-31	4	9081495	9081496	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9082730	9082731	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9085218	9085219	1	T	nonrep	3	0.75	1
Rue3-1-31	4	9088521	9088522	1	A	nonrep	5	0.833333	1
Rue3-1-31	4	9091089	9091090	1	T	core_nonrep	12	0.875	1
Rue3-1-31	4	9099864	9099865	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	9103910	9103911	1	G	core_nonrep	10	1	1
Rue3-1-31	4	9104340	9104341	1	C	core_nonrep	15	1	1
Rue3-1-31	4	9104455	9104456	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	9105357	9105358	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	9106126	9106127	1	A	core_nonrep	17	0.923077	1
Rue3-1-31	4	9107715	9107716	1	A	core_nonrep	14	0.785714	1
Rue3-1-31	4	9107805	9107806	1	C	core_nonrep	12	0.916667	1
Rue3-1-31	4	9108818	9108819	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	9108820	9108821	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	4	9108826	9108827	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9110288	9110289	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9110296	9110297	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	9111219	9111220	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	9111322	9111323	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9112476	9112477	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9114397	9114398	1	G	core_nonrep	13	0.916667	1
Rue3-1-31	4	9120815	9120816	2	GT	core_nonrep	8	1	1
Rue3-1-31	4	9128397	9128398	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	9130030	9130031	1	A	core_nonrep	8	1	1
Rue3-1-31	4	9130033	9130034	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9130110	9130111	1	C	core_nonrep	5	1	1
Rue3-1-31	4	9131186	9131187	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9131636	9131637	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9131704	9131705	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9134811	9134812	1	T	core_nonrep	12	0.818182	1
Rue3-1-31	4	9135628	9135629	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9136635	9136636	1	A	core_nonrep	13	1	1
Rue3-1-31	4	9136879	9136880	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9136890	9136891	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	9136897	9136898	1	C	core_nonrep	7	1	1
Rue3-1-31	4	9136958	9136959	1	A	core_nonrep	20	0.944444	1
Rue3-1-31	4	9137366	9137367	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9138628	9138629	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9138642	9138643	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	9140817	9140818	1	A	core_nonrep	11	0.7	1
Rue3-1-31	4	9141478	9141479	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	4	9141528	9141529	2	GA	core_nonrep	9	0.875	1
Rue3-1-31	4	9141617	9141618	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9141772	9141773	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9142603	9142604	1	A	core_nonrep	12	0.888889	1
Rue3-1-31	4	9143755	9143756	1	A	core_nonrep	6	1	1
Rue3-1-31	4	9144244	9144245	1	A	core_nonrep	6	1	1
Rue3-1-31	4	9149598	9149599	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	9151115	9151116	1	T	core_nonrep	9	0.9	1
Rue3-1-31	4	9151127	9151128	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9151963	9151964	1	G	core_nonrep	10	1	1
Rue3-1-31	4	9157228	9157229	1	C	core_nonrep	10	1	1
Rue3-1-31	4	9162433	9162434	2	AG	core_nonrep	6	1	1
Rue3-1-31	4	9163773	9163774	1	C	core_nonrep	7	1	1
Rue3-1-31	4	9164805	9164806	1	T	core_nonrep	5	1	1.16667
Rue3-1-31	4	9166700	9166701	1	G	core_nonrep	4	1	1
Rue3-1-31	4	9169234	9169235	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9171410	9171411	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	4	9172279	9172280	1	T	core_nonrep	11	1	1
Rue3-1-31	4	9174264	9174265	1	C	core_nonrep	6	0.8	1
Rue3-1-31	4	9174293	9174294	1	G	core_nonrep	8	1	1
Rue3-1-31	4	9176601	9176602	2	AC	core_nonrep	13	0.8	1
Rue3-1-31	4	9181542	9181543	1	A	core_nonrep	8	1	1
Rue3-1-31	4	9183789	9183790	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	4	9184610	9184611	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	9184950	9184951	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	9185142	9185143	1	C	core_nonrep	7	1	1
Rue3-1-31	4	9185272	9185273	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9194388	9194389	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	9201568	9201569	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	4	9204212	9204213	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9214859	9214860	1	T	core_nonrep	7	0.7	1
Rue3-1-31	4	9216742	9216743	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9218252	9218253	1	C	core_nonrep	8	0.777778	1
Rue3-1-31	4	9222782	9222783	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	9225358	9225359	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9227317	9227318	1	C	core_nonrep	16	0.928571	1
Rue3-1-31	4	9227442	9227443	1	C	core_nonrep	10	1	1
Rue3-1-31	4	9232987	9232988	1	T	core_nonrep	9	1	1
Rue3-1-31	4	9235201	9235202	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	4	9235733	9235734	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9236754	9236755	1	C	core_nonrep	9	1	1
Rue3-1-31	4	9241694	9241695	1	T	core_nonrep	7	0.7	1
Rue3-1-31	4	9251346	9251347	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9255060	9255061	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9256435	9256436	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9257034	9257035	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9259202	9259203	1	G	core_nonrep	13	0.916667	1
Rue3-1-31	4	9265186	9265187	1	G	core_nonrep	8	1	1
Rue3-1-31	4	9265741	9265742	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9266843	9266844	2	TA	core_nonrep	4	1	1
Rue3-1-31	4	9271022	9271023	1	A	core_nonrep	21	0.888889	1
Rue3-1-31	4	9271257	9271258	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9276707	9276708	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9277173	9277174	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9281397	9281398	1	C	core_nonrep	14	1	1
Rue3-1-31	4	9287415	9287416	1	A	core_nonrep	15	1	1
Rue3-1-31	4	9288722	9288723	1	G	core_nonrep	12	1	1
Rue3-1-31	4	9296236	9296237	3	ACA	core_nonrep	9	0.9	1
Rue3-1-31	4	9299958	9299959	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9301924	9301925	1	T	core_nonrep	15	0.8125	1
Rue3-1-31	4	9306099	9306100	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9306619	9306620	2	AT	core_nonrep	7	0.857143	1
Rue3-1-31	4	9308844	9308845	1	G	core_nonrep	16	1	1
Rue3-1-31	4	9314183	9314184	1	T	core_nonrep	17	1	1
Rue3-1-31	4	9315265	9315266	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	4	9342668	9342669	2	TT	core_nonrep	10	1	1
Rue3-1-31	4	9345127	9345128	1	A	core_nonrep	8	1	1
Rue3-1-31	4	9357167	9357168	1	C	nonrep	5	0.714286	1
Rue3-1-31	4	9360629	9360630	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	9366727	9366728	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	9370698	9370699	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	9382940	9382941	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	9385896	9385897	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9385940	9385941	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9397112	9397113	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	4	9399706	9399707	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	4	9401710	9401711	1	C	core_nonrep	6	1	1
Rue3-1-31	4	9406490	9406491	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9407508	9407509	1	G	core_nonrep	4	0.8	1
Rue3-1-31	4	9409123	9409124	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9410067	9410068	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9415190	9415191	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9419464	9419465	2	GC	core_nonrep	5	1	1
Rue3-1-31	4	9421102	9421103	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	9422369	9422370	1	G	core_nonrep	3	1	1
Rue3-1-31	4	9422726	9422727	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9425004	9425005	1	G	core_nonrep	18	1	1
Rue3-1-31	4	9425197	9425198	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9426565	9426566	1	G	core_nonrep	12	1	1
Rue3-1-31	4	9429162	9429163	1	A	nonrep	4	1	1
Rue3-1-31	4	9429922	9429923	1	C	core_nonrep	7	1	1
Rue3-1-31	4	9431338	9431339	1	A	core_nonrep	12	1	1
Rue3-1-31	4	9432356	9432357	2	CT	core_nonrep	9	1	1
Rue3-1-31	4	9433099	9433100	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9434526	9434527	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9435042	9435043	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9436161	9436162	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	9438493	9438494	1	A	nonrep	3	1	1
Rue3-1-31	4	9440731	9440732	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9440928	9440929	1	C	core_nonrep	8	1	1
Rue3-1-31	4	9441829	9441830	1	T	core_nonrep	8	0.7	1
Rue3-1-31	4	9442181	9442182	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	4	9442196	9442197	1	T	core_nonrep	11	1	1
Rue3-1-31	4	9442333	9442334	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	9443334	9443335	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	4	9444416	9444417	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	4	9444986	9444987	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	9445840	9445841	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	9445915	9445916	1	C	core_nonrep	3	1	1
Rue3-1-31	4	9446315	9446316	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9449280	9449281	1	C	core_nonrep	6	1	1
Rue3-1-31	4	9450133	9450134	1	A	core_nonrep	6	1	1
Rue3-1-31	4	9450224	9450225	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	9450225	9450226	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	9450299	9450300	1	T	core_nonrep	10	1	1
Rue3-1-31	4	9450662	9450663	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	9451309	9451310	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9453407	9453408	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	4	9454449	9454450	1	A	core_nonrep	6	1	1
Rue3-1-31	4	9454518	9454519	1	G	core_nonrep	7	0.8	1
Rue3-1-31	4	9462400	9462401	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	9464265	9464266	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9464384	9464385	1	T	core_nonrep	9	1	1
Rue3-1-31	4	9464430	9464431	1	C	core_nonrep	9	1	1
Rue3-1-31	4	9464793	9464794	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	9464927	9464928	1	T	core_nonrep	7	0.75	1
Rue3-1-31	4	9466146	9466147	1	G	core_nonrep	6	1	1
Rue3-1-31	4	9472609	9472610	1	T	nonrep	6	0.75	1
Rue3-1-31	4	9498548	9498549	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9502651	9502652	1	T	core_nonrep	15	1	1
Rue3-1-31	4	9516673	9516674	1	T	core_nonrep	8	0.8	1
Rue3-1-31	4	9527499	9527500	1	C	core_nonrep	12	0.9	1
Rue3-1-31	4	9545198	9545199	1	T	core	4	1	1.4
Rue3-1-31	4	9557900	9557901	1	T	nonrep	3	1	1
Rue3-1-31	4	9558439	9558440	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	9558440	9558441	1	G	core_nonrep	4	1	1
Rue3-1-31	4	9559212	9559213	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9566456	9566457	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9566803	9566804	1	T	core_nonrep	5	1	1
Rue3-1-31	4	9566961	9566962	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	9566971	9566972	1	A	nonrep	3	0.75	1
Rue3-1-31	4	9570236	9570237	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9572658	9572659	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	9575665	9575666	2	TG	core_nonrep	10	0.9	1
Rue3-1-31	4	9576646	9576647	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9577355	9577356	1	C	core_nonrep	15	0.909091	1
Rue3-1-31	4	9582063	9582064	1	G	core_nonrep	7	1	1
Rue3-1-31	4	9584514	9584515	1	G	core_nonrep	4	1	1
Rue3-1-31	4	9584619	9584620	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	9585223	9585224	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9585292	9585293	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	9591806	9591807	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9591972	9591973	1	T	core_nonrep	11	1	1
Rue3-1-31	4	9594990	9594991	1	G	core_nonrep	9	1	1
Rue3-1-31	4	9598062	9598063	1	C	core_nonrep	12	1	1
Rue3-1-31	4	9598077	9598078	1	G	core_nonrep	8	0.75	1
Rue3-1-31	4	9598248	9598249	1	G	core_nonrep	8	1	1
Rue3-1-31	4	9601981	9601982	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	4	9603922	9603923	1	A	core_nonrep	12	0.818182	1
Rue3-1-31	4	9604458	9604459	1	C	core_nonrep	14	0.833333	1
Rue3-1-31	4	9608394	9608395	1	G	core_nonrep	3	1	1
Rue3-1-31	4	9609890	9609891	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9610658	9610659	1	T	core_nonrep	17	1	1
Rue3-1-31	4	9610728	9610729	1	C	core_nonrep	12	0.785714	1
Rue3-1-31	4	9611132	9611133	1	C	core_nonrep	16	0.882353	1
Rue3-1-31	4	9611302	9611303	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	4	9612231	9612232	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	4	9612459	9612460	1	C	core_nonrep	9	1	1
Rue3-1-31	4	9612657	9612658	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9612659	9612660	1	C	core_nonrep	8	1	1
Rue3-1-31	4	9615719	9615720	1	C	core_nonrep	12	0.846154	1
Rue3-1-31	4	9619122	9619123	1	A	core_nonrep	11	1	1
Rue3-1-31	4	9619144	9619145	1	A	core_nonrep	11	1	1
Rue3-1-31	4	9627641	9627642	1	C	core_nonrep	11	1	1
Rue3-1-31	4	9628416	9628417	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	4	9642618	9642619	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	4	9642630	9642631	1	G	core_nonrep	6	1	1
Rue3-1-31	4	9642653	9642654	1	G	nonrep	5	1	1
Rue3-1-31	4	9644641	9644642	1	A	core_nonrep	7	0.8	1
Rue3-1-31	4	9646419	9646420	1	A	core_nonrep	7	1	1
Rue3-1-31	4	9648370	9648371	1	T	core_nonrep	13	1	1
Rue3-1-31	4	9648919	9648920	2	AT	core_nonrep	8	0.7	1
Rue3-1-31	4	9649499	9649500	1	C	core_nonrep	5	1	1
Rue3-1-31	4	9649501	9649502	1	A	core_nonrep	8	1	1
Rue3-1-31	4	9654401	9654402	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9654408	9654409	1	A	core_nonrep	8	1	1
Rue3-1-31	4	9660138	9660139	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9660912	9660913	1	T	core_nonrep	10	0.9	1
Rue3-1-31	4	9660918	9660919	1	T	core_nonrep	12	1	1
Rue3-1-31	4	9661420	9661421	1	T	core_nonrep	24	0.851852	1
Rue3-1-31	4	9662600	9662601	1	A	core_nonrep	14	1	1
Rue3-1-31	4	9664031	9664032	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	4	9665169	9665170	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	4	9665209	9665210	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9665227	9665228	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	9667464	9667465	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	9668172	9668173	1	A	core_nonrep	15	0.933333	1
Rue3-1-31	4	9668381	9668382	1	T	core_nonrep	9	1	1
Rue3-1-31	4	9670493	9670494	1	A	core_nonrep	13	1	1
Rue3-1-31	4	9672456	9672457	1	A	core_nonrep	16	1	1
Rue3-1-31	4	9673331	9673332	1	A	core_nonrep	13	1	1
Rue3-1-31	4	9677126	9677127	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	9677291	9677292	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	9678615	9678616	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9679424	9679425	1	A	core_nonrep	10	1	1
Rue3-1-31	4	9680610	9680611	3	TTA	core_nonrep	3	0.75	1
Rue3-1-31	4	9680632	9680633	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9680696	9680697	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	9680711	9680712	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	4	9680755	9680756	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9681986	9681987	1	T	core_nonrep	8	1	1
Rue3-1-31	4	9684114	9684115	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	9685169	9685170	1	G	nonrep	3	1	1
Rue3-1-31	4	9691369	9691370	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	9699269	9699270	2	AG	core_nonrep	5	0.8	1
Rue3-1-31	4	9713306	9713307	1	C	core_nonrep	20	0.826087	1
Rue3-1-31	4	9727445	9727446	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	9730406	9730407	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9730407	9730408	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9740687	9740688	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	9741723	9741724	1	T	core_nonrep	17	1	1
Rue3-1-31	4	9741875	9741876	2	AA	core_nonrep	10	0.833333	1
Rue3-1-31	4	9741936	9741937	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9744591	9744592	1	A	nonrep	4	0.8	1
Rue3-1-31	4	9749173	9749174	1	G	core_nonrep	6	1	1
Rue3-1-31	4	9754005	9754006	2	TA	core_nonrep	7	1	1
Rue3-1-31	4	9771439	9771440	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9783978	9783979	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9789040	9789041	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9789526	9789527	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9789770	9789771	1	T	core_nonrep	7	1	1
Rue3-1-31	4	9793710	9793711	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	9793711	9793712	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	9793804	9793805	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	9793975	9793976	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9802507	9802508	1	A	nonrep	6	0.75	1
Rue3-1-31	4	9803039	9803040	1	G	core_nonrep	5	1	1
Rue3-1-31	4	9803760	9803761	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	9805443	9805444	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	4	9807939	9807940	1	A	core_nonrep	10	0.875	1
Rue3-1-31	4	9822930	9822931	1	T	core_nonrep	11	0.769231	1
Rue3-1-31	4	9830971	9830972	1	A	nonrep	3	0.75	1
Rue3-1-31	4	9834170	9834171	1	C	core_nonrep	6	1	1
Rue3-1-31	4	9835626	9835627	1	T	core_nonrep	6	1	1
Rue3-1-31	4	9835676	9835677	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9847172	9847173	1	G	core_nonrep	6	1	1
Rue3-1-31	4	9848810	9848811	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9851211	9851212	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9852555	9852556	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9858856	9858857	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	4	9864305	9864306	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	9864628	9864629	1	G	core_nonrep	8	0.8	1
Rue3-1-31	4	9866501	9866502	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	9888360	9888361	1	C	core_nonrep	8	0.875	1
Rue3-1-31	4	9889242	9889243	1	T	core_nonrep	4	1	1
Rue3-1-31	4	9896800	9896801	1	A	nonrep	3	1	1
Rue3-1-31	4	9898213	9898214	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9899545	9899546	1	A	core_nonrep	4	1	1
Rue3-1-31	4	9901045	9901046	1	T	nonrep	3	0.75	1
Rue3-1-31	4	9919134	9919135	1	C	core_nonrep	12	0.909091	1
Rue3-1-31	4	9926490	9926491	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	9926491	9926492	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	9927760	9927761	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9936643	9936644	1	G	core_nonrep	12	1	1
Rue3-1-31	4	9943812	9943813	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	9945643	9945644	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9951765	9951766	1	G	core_nonrep	10	1	1
Rue3-1-31	4	9958983	9958984	1	A	core_nonrep	9	1	1
Rue3-1-31	4	9973746	9973747	1	C	core_nonrep	6	1	1
Rue3-1-31	4	9974203	9974204	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	9975021	9975022	1	T	nonrep	4	1	1
Rue3-1-31	4	9976741	9976742	1	A	core_nonrep	3	1	1
Rue3-1-31	4	9976742	9976743	1	T	core_nonrep	3	1	1
Rue3-1-31	4	9986005	9986006	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	9987637	9987638	1	A	core_nonrep	5	1	1
Rue3-1-31	4	9989913	9989914	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	9997153	9997154	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10001424	10001425	1	A	core_nonrep	7	0.75	1
Rue3-1-31	4	10002705	10002706	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10003638	10003639	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	10004768	10004769	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10005883	10005884	1	T	core_nonrep	7	1	1
Rue3-1-31	4	10009320	10009321	1	A	core_nonrep	9	1	1
Rue3-1-31	4	10009346	10009347	1	C	core_nonrep	6	1	1
Rue3-1-31	4	10016501	10016502	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	10016502	10016503	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	10018264	10018265	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	10019996	10019997	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10020135	10020136	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10020658	10020659	1	G	core_nonrep	4	1	1
Rue3-1-31	4	10027350	10027351	1	T	core_nonrep	13	1	1
Rue3-1-31	4	10031270	10031271	1	A	core_nonrep	11	1	1
Rue3-1-31	4	10032508	10032509	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10036108	10036109	1	G	core_nonrep	12	1	1
Rue3-1-31	4	10038058	10038059	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10041885	10041886	1	G	core_nonrep	9	1	1
Rue3-1-31	4	10041903	10041904	1	G	core_nonrep	7	1	1
Rue3-1-31	4	10048080	10048081	1	A	core_nonrep	12	1	1
Rue3-1-31	4	10050689	10050690	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	10089195	10089196	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10097368	10097369	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	4	10098082	10098083	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10114733	10114734	1	T	core_nonrep	7	1	1
Rue3-1-31	4	10114798	10114799	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	10116175	10116176	1	T	core_nonrep	9	1	1
Rue3-1-31	4	10119514	10119515	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	10119517	10119518	2	AG	core_nonrep	6	0.857143	1
Rue3-1-31	4	10120664	10120665	1	T	core_nonrep	12	1	1
Rue3-1-31	4	10131925	10131926	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10132172	10132173	3	TTT	core_nonrep	3	0.75	1
Rue3-1-31	4	10137632	10137633	1	T	core_nonrep	8	1	1
Rue3-1-31	4	10138487	10138488	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	10140664	10140665	1	T	core_nonrep	12	1	1
Rue3-1-31	4	10141946	10141947	1	A	nonrep	3	1	1
Rue3-1-31	4	10144470	10144471	1	A	core_nonrep	8	1	1
Rue3-1-31	4	10145901	10145902	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10147863	10147864	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10147869	10147870	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10152754	10152755	1	G	core_nonrep	6	1	1
Rue3-1-31	4	10154772	10154773	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	4	10162793	10162794	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	10163047	10163048	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10164540	10164541	1	T	nonrep	3	0.75	1
Rue3-1-31	4	10167446	10167447	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	4	10167865	10167866	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10170872	10170873	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	10171099	10171100	1	G	core_nonrep	4	1	1
Rue3-1-31	4	10175341	10175342	2	TT	nonrep	3	1	1
Rue3-1-31	4	10175592	10175593	1	T	core_nonrep	14	0.846154	1
Rue3-1-31	4	10176725	10176726	1	A	core_nonrep	10	1	1
Rue3-1-31	4	10177614	10177615	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10181033	10181034	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10181058	10181059	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	10181109	10181110	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10183347	10183348	1	C	core_nonrep	9	1	1
Rue3-1-31	4	10189399	10189400	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10190141	10190142	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	10192098	10192099	1	A	core_nonrep	3	1	1
Rue3-1-31	4	10197232	10197233	2	AA	core_nonrep	12	1	1
Rue3-1-31	4	10210099	10210100	1	A	nonrep	4	0.8	1
Rue3-1-31	4	10225727	10225728	1	T	core_nonrep	14	1	1
Rue3-1-31	4	10229808	10229809	1	T	core_nonrep	9	0.8	1
Rue3-1-31	4	10246288	10246289	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10248302	10248303	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	4	10255932	10255933	2	AT	core_nonrep	4	0.8	1
Rue3-1-31	4	10255933	10255934	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	10258610	10258611	1	T	core_nonrep	7	1	1
Rue3-1-31	4	10258899	10258900	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10265765	10265766	2	CT	core_nonrep	5	0.8	1
Rue3-1-31	4	10266249	10266250	1	C	core_nonrep	7	0.8	1
Rue3-1-31	4	10268290	10268291	2	TC	core_nonrep	7	0.875	1
Rue3-1-31	4	10273586	10273587	1	G	core_nonrep	11	1	1
Rue3-1-31	4	10275172	10275173	1	A	core_nonrep	3	1	1
Rue3-1-31	4	10277691	10277692	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	4	10291400	10291401	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10291890	10291891	1	A	core_nonrep	3	1	1
Rue3-1-31	4	10293332	10293333	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10293454	10293455	1	A	core_nonrep	8	1	1
Rue3-1-31	4	10294653	10294654	2	AA	core_nonrep	8	1	1
Rue3-1-31	4	10295487	10295488	1	A	nonrep	3	0.75	1
Rue3-1-31	4	10296114	10296115	1	A	core_nonrep	14	1	1
Rue3-1-31	4	10299304	10299305	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	10299765	10299766	1	A	nonrep	6	0.857143	1
Rue3-1-31	4	10301316	10301317	1	T	core_nonrep	10	1	1
Rue3-1-31	4	10301597	10301598	1	A	core_nonrep	7	0.714286	1.07692
Rue3-1-31	4	10301600	10301601	1	C	core_nonrep	10	0.75	1.07143
Rue3-1-31	4	10301892	10301893	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	10301914	10301915	1	C	core_nonrep	5	1	1
Rue3-1-31	4	10302716	10302717	1	C	core_nonrep	27	1	1
Rue3-1-31	4	10310912	10310913	1	T	core_nonrep	8	1	1
Rue3-1-31	4	10311054	10311055	1	G	core_nonrep	8	0.75	1
Rue3-1-31	4	10317578	10317579	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10319417	10319418	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	10321435	10321436	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	4	10322606	10322607	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	10325304	10325305	1	G	core_nonrep	8	1	1
Rue3-1-31	4	10325305	10325306	1	A	core_nonrep	8	0.714286	1
Rue3-1-31	4	10326396	10326397	1	A	core_nonrep	9	1	1
Rue3-1-31	4	10334504	10334505	1	A	core_nonrep	11	0.9	1
Rue3-1-31	4	10334908	10334909	1	T	core_nonrep	8	1	1
Rue3-1-31	4	10336035	10336036	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10336358	10336359	1	T	core_nonrep	5	1	1
Rue3-1-31	4	10340273	10340274	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	4	10342032	10342033	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10342537	10342538	1	A	core_nonrep	7	0.7	1
Rue3-1-31	4	10347613	10347614	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	4	10359841	10359842	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10361770	10361771	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	4	10366181	10366182	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	10367675	10367676	1	T	nonrep	10	0.833333	1
Rue3-1-31	4	10369772	10369773	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10371111	10371112	1	T	core_nonrep	9	1	1
Rue3-1-31	4	10371660	10371661	1	C	core_nonrep	4	0.75	1
Rue3-1-31	4	10380269	10380270	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10380962	10380963	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10382344	10382345	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10382373	10382374	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10383482	10383483	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10383573	10383574	3	GGG	core_nonrep	6	1	1
Rue3-1-31	4	10385807	10385808	1	T	core_nonrep	7	1	1
Rue3-1-31	4	10387662	10387663	2	TT	core_nonrep	6	1	1
Rue3-1-31	4	10387663	10387664	1	G	core_nonrep	6	1	1
Rue3-1-31	4	10398460	10398461	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	4	10400572	10400573	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10570580	10570581	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10572904	10572905	1	C	core_nonrep	3	1	1
Rue3-1-31	4	10573433	10573434	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10573862	10573863	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10575146	10575147	1	A	core_nonrep	11	0.8	1
Rue3-1-31	4	10577675	10577676	1	T	nonrep	3	0.75	1
Rue3-1-31	4	10577820	10577821	1	A	nonrep	3	0.75	1
Rue3-1-31	4	10592598	10592599	1	A	nonrep	3	1	1
Rue3-1-31	4	10594019	10594020	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10594020	10594021	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10594840	10594841	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	10599969	10599970	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10600506	10600507	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10600862	10600863	1	C	core_nonrep	7	1	1
Rue3-1-31	4	10601728	10601729	1	G	core_nonrep	16	1	1
Rue3-1-31	4	10604787	10604788	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	4	10606352	10606353	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10606365	10606366	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	10607708	10607709	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10610424	10610425	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	10615541	10615542	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10615945	10615946	1	T	core_nonrep	9	1	1
Rue3-1-31	4	10615950	10615951	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10618001	10618002	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10618002	10618003	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10619076	10619077	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	10619796	10619797	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	10621674	10621675	2	TT	core_nonrep	6	0.833333	1
Rue3-1-31	4	10638483	10638484	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10639991	10639992	1	C	core_nonrep	6	1	1
Rue3-1-31	4	10640159	10640160	1	G	core_nonrep	12	1	1
Rue3-1-31	4	10640560	10640561	1	A	core_nonrep	10	1	1
Rue3-1-31	4	10640929	10640930	1	C	core_nonrep	13	0.909091	1
Rue3-1-31	4	10642362	10642363	1	C	core_nonrep	4	1	1
Rue3-1-31	4	10661259	10661260	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	4	10661260	10661261	1	C	core_nonrep	8	1	1
Rue3-1-31	4	10661566	10661567	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	10673499	10673500	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	4	10682875	10682876	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	4	10683972	10683973	1	A	core_nonrep	14	1	1
Rue3-1-31	4	10685667	10685668	1	A	core_nonrep	11	1	1
Rue3-1-31	4	10685717	10685718	2	TA	core_nonrep	8	1	1
Rue3-1-31	4	10685719	10685720	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	4	10685915	10685916	1	C	core_nonrep	7	0.857143	1.11111
Rue3-1-31	4	10686236	10686237	2	TG	core_nonrep	8	0.777778	1
Rue3-1-31	4	10686237	10686238	1	C	core_nonrep	9	0.7	1
Rue3-1-31	4	10688962	10688963	2	AA	core_nonrep	10	0.769231	1
Rue3-1-31	4	10689610	10689611	1	C	core_nonrep	8	0.727273	1
Rue3-1-31	4	10689611	10689612	2	TG	core_nonrep	8	0.8	1
Rue3-1-31	4	10692748	10692749	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	10712653	10712654	1	C	nonrep	3	1	1
Rue3-1-31	4	10713597	10713598	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	10723710	10723711	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10724817	10724818	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	10729645	10729646	1	T	core_nonrep	15	1	1
Rue3-1-31	4	10733432	10733433	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	10735692	10735693	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	10739578	10739579	1	A	core_nonrep	14	1	1
Rue3-1-31	4	10742072	10742073	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	10742717	10742718	1	G	nonrep	3	0.75	1
Rue3-1-31	4	10742782	10742783	2	TA	core_nonrep	5	1	1
Rue3-1-31	4	10743512	10743513	1	C	core_nonrep	3	1	1
Rue3-1-31	4	10747667	10747668	1	A	core_nonrep	10	0.9	1
Rue3-1-31	4	10752100	10752101	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	4	10754508	10754509	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10757869	10757870	1	T	core_nonrep	5	1	1
Rue3-1-31	4	10771273	10771274	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10772312	10772313	1	C	core_nonrep	14	1	1
Rue3-1-31	4	10773256	10773257	1	T	core_nonrep	8	1	1
Rue3-1-31	4	10776565	10776566	1	T	nonrep	3	0.75	1
Rue3-1-31	4	10780001	10780002	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10794057	10794058	1	T	core_nonrep	5	1	1
Rue3-1-31	4	10797286	10797287	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	4	10799339	10799340	1	T	core_nonrep	4	0.75	1.14286
Rue3-1-31	4	10804942	10804943	1	A	core_nonrep	11	1	1
Rue3-1-31	4	10811530	10811531	1	A	core_nonrep	16	0.933333	1
Rue3-1-31	4	10811671	10811672	2	TC	core_nonrep	8	1	1
Rue3-1-31	4	10813678	10813679	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	10818770	10818771	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	4	10823514	10823515	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	10823533	10823534	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10825628	10825629	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	10825893	10825894	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	10826316	10826317	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	10829785	10829786	1	T	nonrep	4	1	1
Rue3-1-31	4	10838342	10838343	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	10852743	10852744	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10854130	10854131	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	10862582	10862583	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10865048	10865049	1	T	nonrep	3	0.75	1
Rue3-1-31	4	10873163	10873164	1	A	core_nonrep	10	1	1
Rue3-1-31	4	10873501	10873502	1	A	core_nonrep	9	0.75	1
Rue3-1-31	4	10875876	10875877	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	10896257	10896258	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	10906045	10906046	2	TT	core_nonrep	10	1	1
Rue3-1-31	4	10906347	10906348	1	C	core_nonrep	4	1	1
Rue3-1-31	4	10906370	10906371	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	4	10906508	10906509	1	A	core_nonrep	7	0.8	1
Rue3-1-31	4	10913374	10913375	1	A	nonrep	4	1	1
Rue3-1-31	4	10915897	10915898	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10921410	10921411	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10930893	10930894	1	C	core_nonrep	5	1	1
Rue3-1-31	4	10931843	10931844	1	C	core_nonrep	12	0.888889	1
Rue3-1-31	4	10932502	10932503	1	A	core_nonrep	3	1	1
Rue3-1-31	4	10936908	10936909	1	A	core_nonrep	3	1	1
Rue3-1-31	4	10937634	10937635	1	A	core_nonrep	5	1	1
Rue3-1-31	4	10938161	10938162	2	AG	core_nonrep	4	1	1
Rue3-1-31	4	10938951	10938952	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	10939969	10939970	1	T	core_nonrep	7	1	1
Rue3-1-31	4	10943994	10943995	1	T	core_nonrep	5	1	1
Rue3-1-31	4	10946797	10946798	1	T	nonrep	4	1	1
Rue3-1-31	4	10957131	10957132	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10957510	10957511	2	GA	core_nonrep	5	1	1
Rue3-1-31	4	10959074	10959075	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	10966299	10966300	1	T	core_nonrep	5	1	1
Rue3-1-31	4	10968293	10968294	1	T	core_nonrep	3	1	1
Rue3-1-31	4	10970123	10970124	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	10970184	10970185	1	G	core_nonrep	7	1	1
Rue3-1-31	4	10970321	10970322	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10972818	10972819	2	TT	core_nonrep	7	1	1
Rue3-1-31	4	10973068	10973069	1	G	core_nonrep	8	1	1
Rue3-1-31	4	10974025	10974026	1	A	nonrep	3	0.75	1
Rue3-1-31	4	10974251	10974252	1	A	core_nonrep	7	1	1
Rue3-1-31	4	10975123	10975124	1	C	core_nonrep	9	0.875	1
Rue3-1-31	4	10979235	10979236	1	T	core_nonrep	6	1	1
Rue3-1-31	4	10981232	10981233	1	C	core_nonrep	11	0.875	1
Rue3-1-31	4	10981666	10981667	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	4	10981676	10981677	1	C	core_nonrep	12	1	1
Rue3-1-31	4	10985104	10985105	1	A	core_nonrep	6	1	1
Rue3-1-31	4	10985878	10985879	1	A	core_nonrep	4	1	1
Rue3-1-31	4	10988039	10988040	1	T	core_nonrep	4	1	1
Rue3-1-31	4	10988849	10988850	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	10989583	10989584	1	T	core_nonrep	13	1	1
Rue3-1-31	4	11021891	11021892	1	G	core_nonrep	3	1	1
Rue3-1-31	4	11024018	11024019	1	T	core_nonrep	5	1	1
Rue3-1-31	4	11029548	11029549	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	11030162	11030163	1	T	core_nonrep	7	1	1
Rue3-1-31	4	11031198	11031199	1	T	core_nonrep	18	1	1
Rue3-1-31	4	11031203	11031204	1	C	core_nonrep	19	0.944444	1
Rue3-1-31	4	11031684	11031685	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11032728	11032729	1	C	core_nonrep	5	1	1
Rue3-1-31	4	11034795	11034796	1	A	core_nonrep	10	1	1
Rue3-1-31	4	11036646	11036647	1	G	core_nonrep	8	0.714286	1.81818
Rue3-1-31	4	11092464	11092465	1	A	core_nonrep	18	1	1
Rue3-1-31	4	11098425	11098426	3	TCC	core_nonrep	17	0.894737	1
Rue3-1-31	4	11104885	11104886	3	GAA	core_nonrep	8	0.7	1
Rue3-1-31	4	11120830	11120831	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	11123587	11123588	1	G	nonrep	3	1	1
Rue3-1-31	4	11151777	11151778	1	A	core_nonrep	5	1	1
Rue3-1-31	4	11152057	11152058	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11152861	11152862	1	T	core_nonrep	4	1	1
Rue3-1-31	4	11153487	11153488	1	T	core_nonrep	6	1	1
Rue3-1-31	4	11154396	11154397	2	AG	core_nonrep	5	1	1
Rue3-1-31	4	11175224	11175225	1	A	core_nonrep	14	1	1
Rue3-1-31	4	11181512	11181513	1	T	core_nonrep	4	1	1
Rue3-1-31	4	11191456	11191457	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	11214654	11214655	1	A	core_nonrep	7	1	1
Rue3-1-31	4	11221500	11221501	3	TTT	core_nonrep	4	1	1
Rue3-1-31	4	11232449	11232450	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11241051	11241052	1	G	core_nonrep	7	1	1
Rue3-1-31	4	11267116	11267117	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	11267120	11267121	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	4	11267786	11267787	1	A	core_nonrep	10	1	1
Rue3-1-31	4	11267833	11267834	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	4	11268071	11268072	1	G	core_nonrep	11	1	1
Rue3-1-31	4	11268557	11268558	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	11270244	11270245	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	11277589	11277590	1	G	core_nonrep	18	1	1
Rue3-1-31	4	11285262	11285263	1	G	core_nonrep	12	1	1
Rue3-1-31	4	11286602	11286603	1	T	core_nonrep	5	1	1
Rue3-1-31	4	11291108	11291109	1	A	core_nonrep	6	1	1
Rue3-1-31	4	11294040	11294041	3	CGC	core_nonrep	15	1	1
Rue3-1-31	4	11297526	11297527	3	AAA	core_nonrep	3	0.75	1
Rue3-1-31	4	11297768	11297769	1	A	core_nonrep	3	1	1
Rue3-1-31	4	11299173	11299174	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	11303895	11303896	1	T	core_nonrep	4	1	1
Rue3-1-31	4	11321764	11321765	1	T	core_nonrep	7	1	1
Rue3-1-31	4	11324627	11324628	1	T	core_nonrep	6	1	1
Rue3-1-31	4	11375652	11375653	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	11377775	11377776	1	A	core_nonrep	3	1	1
Rue3-1-31	4	11380455	11380456	1	G	core_nonrep	12	1	1
Rue3-1-31	4	11384029	11384030	1	T	core_nonrep	17	0.9375	1
Rue3-1-31	4	11391464	11391465	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	4	11391602	11391603	1	T	core_nonrep	7	1	1
Rue3-1-31	4	11391625	11391626	1	A	core_nonrep	7	1	1
Rue3-1-31	4	11395125	11395126	1	T	core_nonrep	16	0.888889	1
Rue3-1-31	4	11399789	11399790	1	A	core_nonrep	10	1	1
Rue3-1-31	4	11402066	11402067	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	4	11402155	11402156	1	T	core_nonrep	4	1	1
Rue3-1-31	4	11402459	11402460	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	4	11406085	11406086	1	G	core_nonrep	5	1	1
Rue3-1-31	4	11406502	11406503	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	4	11414517	11414518	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	11414767	11414768	1	G	nonrep	4	0.8	1
Rue3-1-31	4	11415315	11415316	3	TTA	core_nonrep	6	1	1
Rue3-1-31	4	11423166	11423167	1	A	core_nonrep	5	1	1
Rue3-1-31	4	11427135	11427136	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	4	11430718	11430719	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	11431052	11431053	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	4	11431104	11431105	1	T	core_nonrep	13	0.769231	1
Rue3-1-31	4	11431713	11431714	1	T	nonrep	3	0.75	1
Rue3-1-31	4	11434745	11434746	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	11435708	11435709	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11438017	11438018	1	G	core_nonrep	16	1	1
Rue3-1-31	4	11439240	11439241	1	T	core_nonrep	15	1	1
Rue3-1-31	4	11440120	11440121	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	4	11440496	11440497	1	A	nonrep	4	1	1
Rue3-1-31	4	11440634	11440635	2	AC	core_nonrep	3	1	1
Rue3-1-31	4	11441812	11441813	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11444956	11444957	1	C	nonrep	3	0.75	1
Rue3-1-31	4	11445483	11445484	2	TA	core_nonrep	8	1	1
Rue3-1-31	4	11446564	11446565	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	11455710	11455711	1	C	core_nonrep	11	1	1
Rue3-1-31	4	11467684	11467685	1	T	core_nonrep	9	1	1
Rue3-1-31	4	11467686	11467687	1	G	core_nonrep	8	1	1
Rue3-1-31	4	11496490	11496491	1	C	core_nonrep	6	1	1
Rue3-1-31	4	11547897	11547898	1	T	core_nonrep	6	0.8	1
Rue3-1-31	4	11765919	11765920	2	AA	core_nonrep	3	1	1
Rue3-1-31	4	11794862	11794863	1	A	core_nonrep	6	1	1
Rue3-1-31	4	11799855	11799856	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11802657	11802658	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	11803738	11803739	3	TTC	core_nonrep	3	1	1
Rue3-1-31	4	11826195	11826196	1	C	core_nonrep	20	1	1.33333
Rue3-1-31	4	11832582	11832583	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11841473	11841474	1	G	core_nonrep	8	1	1
Rue3-1-31	4	11843591	11843592	1	T	core_nonrep	5	1	1
Rue3-1-31	4	11846487	11846488	1	T	core_nonrep	14	1	1
Rue3-1-31	4	11851180	11851181	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11852533	11852534	1	G	core_nonrep	15	0.9	1
Rue3-1-31	4	11853189	11853190	1	A	core_nonrep	5	1	1
Rue3-1-31	4	11853332	11853333	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	11854048	11854049	2	AG	core_nonrep	4	1	1
Rue3-1-31	4	11854213	11854214	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11855590	11855591	1	A	core_nonrep	10	1	1
Rue3-1-31	4	11865718	11865719	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	4	11866683	11866684	2	AA	core_nonrep	7	1	1
Rue3-1-31	4	11866684	11866685	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	4	11866910	11866911	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11867542	11867543	1	T	core_nonrep	4	1	1
Rue3-1-31	4	11867910	11867911	1	A	core_nonrep	4	1	1
Rue3-1-31	4	11878936	11878937	1	A	core_nonrep	6	1	1
Rue3-1-31	4	11880121	11880122	1	C	core_nonrep	11	1	1
Rue3-1-31	4	11884925	11884926	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	11885017	11885018	3	AAA	core_nonrep	4	1	1
Rue3-1-31	4	11888116	11888117	1	A	nonrep	3	0.75	1
Rue3-1-31	4	11891611	11891612	1	A	nonrep	5	0.833333	1
Rue3-1-31	4	11892619	11892620	1	T	core_nonrep	6	1	1
Rue3-1-31	4	11895057	11895058	1	G	core_nonrep	9	1	1
Rue3-1-31	4	11898032	11898033	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11908172	11908173	1	A	core_nonrep	6	1	1
Rue3-1-31	4	11908794	11908795	1	C	core_nonrep	10	1	1
Rue3-1-31	4	11910710	11910711	2	AA	core_nonrep	10	1	1
Rue3-1-31	4	11910746	11910747	1	T	core_nonrep	3	1	1
Rue3-1-31	4	11911359	11911360	1	A	core_nonrep	6	1	1
Rue3-1-31	4	11913380	11913381	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	11913383	11913384	1	A	core_nonrep	3	1	1
Rue3-1-31	4	11931884	11931885	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	12006159	12006160	1	T	core_nonrep	5	1	1
Rue3-1-31	4	12006352	12006353	2	GT	core_nonrep	13	1	1
Rue3-1-31	4	12007775	12007776	1	T	core_nonrep	9	1	1
Rue3-1-31	4	12012648	12012649	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12013745	12013746	1	G	core_nonrep	6	1	1
Rue3-1-31	4	12015689	12015690	1	C	core_nonrep	7	0.714286	1
Rue3-1-31	4	12015760	12015761	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	12018768	12018769	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12029288	12029289	1	A	nonrep	3	0.75	1
Rue3-1-31	4	12031564	12031565	1	T	core_nonrep	9	1	1
Rue3-1-31	4	12059469	12059470	1	T	core_nonrep	14	0.916667	1
Rue3-1-31	4	12091208	12091209	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	12091732	12091733	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12096052	12096053	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	12096534	12096535	1	T	core_nonrep	5	1	1
Rue3-1-31	4	12109078	12109079	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12113259	12113260	1	A	core_nonrep	7	1	1
Rue3-1-31	4	12115401	12115402	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12116237	12116238	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	12118549	12118550	2	CA	core_nonrep	4	0.8	1
Rue3-1-31	4	12126865	12126866	1	T	core_nonrep	12	1	1
Rue3-1-31	4	12134722	12134723	1	T	core_nonrep	7	1	1
Rue3-1-31	4	12152439	12152440	1	T	core_nonrep	9	1	1
Rue3-1-31	4	12154983	12154984	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12156575	12156576	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	4	12162187	12162188	1	C	core_nonrep	10	0.833333	1
Rue3-1-31	4	12165404	12165405	1	C	core_nonrep	5	1	1
Rue3-1-31	4	12168083	12168084	1	A	nonrep	4	0.8	1
Rue3-1-31	4	12168143	12168144	1	A	core_nonrep	10	1	1
Rue3-1-31	4	12170827	12170828	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	12170828	12170829	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	12172487	12172488	1	A	core_nonrep	15	0.857143	1
Rue3-1-31	4	12174529	12174530	3	TTT	core_nonrep	3	1	1
Rue3-1-31	4	12181643	12181644	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	12190446	12190447	1	T	core_nonrep	8	0.7	1
Rue3-1-31	4	12211857	12211858	1	C	nonrep	9	0.75	1
Rue3-1-31	4	12229371	12229372	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12234191	12234192	1	T	core_nonrep	3	1	1
Rue3-1-31	4	12235085	12235086	1	A	core_nonrep	3	1	1
Rue3-1-31	4	12255748	12255749	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	4	12255749	12255750	1	T	core_nonrep	7	0.75	1
Rue3-1-31	4	12257738	12257739	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12261577	12261578	1	A	nonrep	4	0.8	1
Rue3-1-31	4	12278760	12278761	2	AA	core_nonrep	6	1	1
Rue3-1-31	4	12286913	12286914	1	A	core_nonrep	18	0.9375	1
Rue3-1-31	4	12286998	12286999	1	A	core_nonrep	10	1	1
Rue3-1-31	4	12313286	12313287	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	4	12313879	12313880	1	A	core_nonrep	4	1	1
Rue3-1-31	4	12315890	12315891	1	T	core_nonrep	12	1	1
Rue3-1-31	4	12317260	12317261	1	T	core_nonrep	10	1	1
Rue3-1-31	4	12320322	12320323	2	CT	nonrep	4	0.8	1
Rue3-1-31	4	12324696	12324697	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	4	12328616	12328617	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	4	12332369	12332370	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12333877	12333878	1	T	core_nonrep	8	1	1
Rue3-1-31	4	12341286	12341287	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	12342038	12342039	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	4	12343852	12343853	1	T	core_nonrep	9	0.875	1
Rue3-1-31	4	12345064	12345065	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12346405	12346406	2	TA	core_nonrep	3	1	1
Rue3-1-31	4	12346406	12346407	1	C	core_nonrep	3	1	1
Rue3-1-31	4	12350246	12350247	1	T	core_nonrep	7	1	1
Rue3-1-31	4	12353251	12353252	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12357681	12357682	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	12372769	12372770	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	12378162	12378163	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12399115	12399116	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	12401350	12401351	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	12410381	12410382	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	4	12411678	12411679	1	A	core_nonrep	9	1	1
Rue3-1-31	4	12411891	12411892	1	C	core_nonrep	5	1	1
Rue3-1-31	4	12412749	12412750	2	CT	core_nonrep	5	1	1
Rue3-1-31	4	12413062	12413063	1	A	nonrep	3	0.75	1
Rue3-1-31	4	12413365	12413366	1	T	core_nonrep	7	1	1
Rue3-1-31	4	12414992	12414993	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12417187	12417188	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	12417252	12417253	1	T	core_nonrep	9	1	1
Rue3-1-31	4	12418936	12418937	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12427941	12427942	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	4	12430036	12430037	1	T	core_nonrep	3	1	1
Rue3-1-31	4	12433119	12433120	1	C	core_nonrep	13	0.833333	1
Rue3-1-31	4	12433134	12433135	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	4	12450757	12450758	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	12450793	12450794	1	A	core_nonrep	4	1	1
Rue3-1-31	4	12451857	12451858	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	12475502	12475503	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12475919	12475920	1	T	core_nonrep	3	1	1
Rue3-1-31	4	12478319	12478320	1	G	core_nonrep	5	1	1
Rue3-1-31	4	12483922	12483923	1	A	core_nonrep	10	1	1
Rue3-1-31	4	12484658	12484659	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	4	12486727	12486728	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	12486728	12486729	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	12496662	12496663	1	A	core_nonrep	4	1	1
Rue3-1-31	4	12501192	12501193	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	12510735	12510736	1	A	nonrep	5	0.833333	1
Rue3-1-31	4	12518081	12518082	1	G	core_nonrep	14	0.722222	1
Rue3-1-31	4	12518082	12518083	2	TT	core_nonrep	17	0.7	1
Rue3-1-31	4	12544584	12544585	1	A	core_nonrep	15	1	1
Rue3-1-31	4	12566908	12566909	2	TA	core_nonrep	14	1	1
Rue3-1-31	4	12575186	12575187	1	T	core_nonrep	8	1	1
Rue3-1-31	4	12581631	12581632	2	TC	core_nonrep	3	1	1
Rue3-1-31	4	12599067	12599068	1	T	nonrep	4	0.8	1
Rue3-1-31	4	12612215	12612216	1	A	core_nonrep	18	1	1
Rue3-1-31	4	12616356	12616357	1	T	core_nonrep	5	1	1
Rue3-1-31	4	12622364	12622365	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	12625038	12625039	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12667411	12667412	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12674878	12674879	1	A	nonrep	3	1	1
Rue3-1-31	4	12694627	12694628	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	12694628	12694629	2	TT	core_nonrep	7	0.857143	1
Rue3-1-31	4	12697160	12697161	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12697707	12697708	1	T	core_nonrep	13	0.9	1
Rue3-1-31	4	12699373	12699374	1	G	nonrep	3	0.75	1.66667
Rue3-1-31	4	12706385	12706386	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	4	12706896	12706897	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12714476	12714477	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	12715121	12715122	1	C	core_nonrep	5	1	1
Rue3-1-31	4	12715224	12715225	1	T	core_nonrep	14	1	1
Rue3-1-31	4	12723883	12723884	1	C	core_nonrep	5	1	1
Rue3-1-31	4	12761074	12761075	1	T	core_nonrep	4	1	1
Rue3-1-31	4	12769306	12769307	1	C	core_nonrep	6	1	1
Rue3-1-31	4	12769653	12769654	1	A	core_nonrep	10	1	1
Rue3-1-31	4	12770293	12770294	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	12776647	12776648	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	12777334	12777335	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	12790725	12790726	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	4	12796265	12796266	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12799796	12799797	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12799798	12799799	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12800171	12800172	1	C	core_nonrep	6	1	1
Rue3-1-31	4	12802370	12802371	1	C	core_nonrep	6	0.8	1
Rue3-1-31	4	12802371	12802372	2	AA	nonrep	6	0.75	1
Rue3-1-31	4	12818700	12818701	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	4	12818701	12818702	1	G	core_nonrep	7	0.75	1
Rue3-1-31	4	12818702	12818703	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	12819788	12819789	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12819983	12819984	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	12822814	12822815	1	T	core_nonrep	5	1	1
Rue3-1-31	4	12823019	12823020	1	T	core_nonrep	7	0.8	1
Rue3-1-31	4	12830677	12830678	1	G	core_nonrep	7	1	1
Rue3-1-31	4	12830762	12830763	2	AA	core_nonrep	6	1	1
Rue3-1-31	4	12833197	12833198	1	T	core_nonrep	12	0.9	1
Rue3-1-31	4	12842324	12842325	1	A	core_nonrep	4	1	1
Rue3-1-31	4	12843440	12843441	1	G	core_nonrep	5	1	1
Rue3-1-31	4	12854345	12854346	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	12857712	12857713	1	T	core_nonrep	6	1	1
Rue3-1-31	4	12863112	12863113	1	A	nonrep	5	0.833333	1
Rue3-1-31	4	12863330	12863331	1	A	core_nonrep	9	1	1
Rue3-1-31	4	12867349	12867350	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	12870087	12870088	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	4	12878746	12878747	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	12884598	12884599	1	T	core_nonrep	16	0.916667	1
Rue3-1-31	4	12907853	12907854	1	T	core_nonrep	8	0.8	1
Rue3-1-31	4	12918153	12918154	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12922151	12922152	1	C	core_nonrep	18	1	1
Rue3-1-31	4	12923618	12923619	1	A	core_nonrep	4	1	1
Rue3-1-31	4	12924953	12924954	1	C	core_nonrep	6	1	1
Rue3-1-31	4	12929111	12929112	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	4	12929722	12929723	1	A	core_nonrep	5	1	1
Rue3-1-31	4	12930385	12930386	1	A	core_nonrep	7	1	1
Rue3-1-31	4	12940973	12940974	1	A	core_nonrep	11	1	1
Rue3-1-31	4	12942381	12942382	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	12948570	12948571	1	C	core_nonrep	7	0.875	1
Rue3-1-31	4	12949661	12949662	1	T	core_nonrep	3	1	1
Rue3-1-31	4	12954225	12954226	1	T	nonrep	4	1	1
Rue3-1-31	4	12974027	12974028	1	A	core_nonrep	11	1	1
Rue3-1-31	4	12974630	12974631	1	A	core_nonrep	10	1	1
Rue3-1-31	4	12977320	12977321	1	T	core_nonrep	8	1	1
Rue3-1-31	4	12977398	12977399	1	T	core_nonrep	10	1	1
Rue3-1-31	4	12980854	12980855	1	A	core_nonrep	6	1	1
Rue3-1-31	4	12981067	12981068	1	T	core_nonrep	3	1	1
Rue3-1-31	4	12982892	12982893	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	4	12989062	12989063	2	AT	core_nonrep	5	1	1
Rue3-1-31	4	12991775	12991776	3	AAA	core_nonrep	4	0.8	1
Rue3-1-31	4	12997029	12997030	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	13017672	13017673	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13020355	13020356	1	C	core_nonrep	4	1	1
Rue3-1-31	4	13022807	13022808	1	G	core_nonrep	5	1	1
Rue3-1-31	4	13028885	13028886	1	C	core_nonrep	12	1	1
Rue3-1-31	4	13031663	13031664	1	T	nonrep	3	0.75	1
Rue3-1-31	4	13036955	13036956	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	13055148	13055149	1	A	core_nonrep	3	1	1
Rue3-1-31	4	13055976	13055977	1	T	core_nonrep	8	1	1
Rue3-1-31	4	13071878	13071879	1	G	core_nonrep	5	0.714286	1
Rue3-1-31	4	13079070	13079071	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	13090020	13090021	2	CA	core_nonrep	24	0.846154	1
Rue3-1-31	4	13092617	13092618	1	T	core_nonrep	10	1	1
Rue3-1-31	4	13092618	13092619	1	G	core_nonrep	11	1	1
Rue3-1-31	4	13114274	13114275	1	A	nonrep	5	1	1
Rue3-1-31	4	13114868	13114869	1	G	core_nonrep	5	1	1
Rue3-1-31	4	13144526	13144527	1	A	nonrep	3	1	1
Rue3-1-31	4	13147394	13147395	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13148378	13148379	1	T	core_nonrep	4	1	1
Rue3-1-31	4	13149530	13149531	2	AA	core_nonrep	7	0.777778	1
Rue3-1-31	4	13149531	13149532	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	13154638	13154639	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	13159450	13159451	2	CT	core_nonrep	7	0.777778	1
Rue3-1-31	4	13161412	13161413	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	13162985	13162986	1	T	core_nonrep	6	1	1
Rue3-1-31	4	13163138	13163139	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	13173130	13173131	2	AG	core_nonrep	3	0.75	1
Rue3-1-31	4	13176331	13176332	1	T	core_nonrep	8	0.875	1
Rue3-1-31	4	13178797	13178798	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	13183479	13183480	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	4	13184045	13184046	1	A	core_nonrep	5	1	1
Rue3-1-31	4	13190830	13190831	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	4	13191020	13191021	1	T	core_nonrep	7	0.8	1
Rue3-1-31	4	13194849	13194850	1	T	core_nonrep	7	1	1
Rue3-1-31	4	13195053	13195054	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	4	13195055	13195056	2	CA	core_nonrep	11	0.9	1
Rue3-1-31	4	13200058	13200059	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13209847	13209848	1	A	nonrep	3	1	1
Rue3-1-31	4	13210004	13210005	1	A	core_nonrep	4	1	1
Rue3-1-31	4	13211180	13211181	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	13230168	13230169	1	A	core_nonrep	7	1	1
Rue3-1-31	4	13232550	13232551	1	A	core_nonrep	6	1	1
Rue3-1-31	4	13250636	13250637	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13258128	13258129	1	A	core_nonrep	9	1	1
Rue3-1-31	4	13296933	13296934	1	A	core_nonrep	5	1	1
Rue3-1-31	4	13348807	13348808	1	A	core_nonrep	10	1	1
Rue3-1-31	4	13350689	13350690	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	13350914	13350915	1	C	core_nonrep	11	0.9	1
Rue3-1-31	4	13362536	13362537	1	G	core_nonrep	8	1	1
Rue3-1-31	4	13383879	13383880	1	C	core_nonrep	8	1	1
Rue3-1-31	4	13384786	13384787	1	G	core_nonrep	17	1	1
Rue3-1-31	4	13396552	13396553	1	G	core_nonrep	16	1	1
Rue3-1-31	4	13396623	13396624	1	G	core_nonrep	18	0.941176	1
Rue3-1-31	4	13401736	13401737	1	C	core_nonrep	8	1	1
Rue3-1-31	4	13411648	13411649	1	C	core_nonrep	10	0.714286	1
Rue3-1-31	4	13416855	13416856	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	4	13426342	13426343	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	4	13428124	13428125	1	A	core_nonrep	17	0.928571	1
Rue3-1-31	4	13439967	13439968	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	13440280	13440281	1	C	core_nonrep	10	1	1
Rue3-1-31	4	13451942	13451943	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13475796	13475797	2	GG	core_nonrep	7	1	1
Rue3-1-31	4	13487538	13487539	1	G	core_nonrep	6	1	1
Rue3-1-31	4	13489745	13489746	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	13491554	13491555	1	T	core_nonrep	10	0.8	1
Rue3-1-31	4	13493334	13493335	1	G	core_nonrep	4	1	1
Rue3-1-31	4	13495015	13495016	2	AG	core_nonrep	11	0.888889	1
Rue3-1-31	4	13501502	13501503	1	A	core_nonrep	6	1	1
Rue3-1-31	4	13504058	13504059	1	T	core_nonrep	15	1	1
Rue3-1-31	4	13504202	13504203	1	A	core_nonrep	10	0.875	1
Rue3-1-31	4	13504203	13504204	1	T	core_nonrep	10	0.8	1
Rue3-1-31	4	13504204	13504205	1	C	core_nonrep	10	1	1
Rue3-1-31	4	13506987	13506988	1	A	core_nonrep	13	0.923077	1
Rue3-1-31	4	13515097	13515098	1	T	nonrep	3	0.75	1
Rue3-1-31	4	13518253	13518254	1	A	core_nonrep	10	1	1
Rue3-1-31	4	13525728	13525729	2	GC	core_nonrep	6	1	1
Rue3-1-31	4	13526851	13526852	1	C	core_nonrep	9	1	1
Rue3-1-31	4	13565267	13565268	1	A	core_nonrep	13	0.833333	1
Rue3-1-31	4	13578856	13578857	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	13581131	13581132	1	G	nonrep	3	1	1
Rue3-1-31	4	13584238	13584239	2	CG	core_nonrep	8	1	1
Rue3-1-31	4	13585171	13585172	1	A	core_nonrep	6	0.75	1
Rue3-1-31	4	13585514	13585515	2	AA	core_nonrep	3	1	1
Rue3-1-31	4	13587053	13587054	1	T	core_nonrep	6	1	1
Rue3-1-31	4	13587054	13587055	1	C	core_nonrep	6	1	1
Rue3-1-31	4	13588433	13588434	1	T	core_nonrep	35	0.9375	1
Rue3-1-31	4	13588729	13588730	2	AA	core_nonrep	7	0.777778	1
Rue3-1-31	4	13589039	13589040	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	4	13590873	13590874	1	C	core_nonrep	22	1	1
Rue3-1-31	4	13593685	13593686	1	C	core_nonrep	7	0.875	1
Rue3-1-31	4	13608602	13608603	1	T	core_nonrep	3	1	1
Rue3-1-31	4	13638393	13638394	1	T	core_nonrep	5	1	1
Rue3-1-31	4	13638894	13638895	1	C	core_nonrep	8	1	1
Rue3-1-31	4	13639353	13639354	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	13640889	13640890	1	T	core_nonrep	6	1	1
Rue3-1-31	4	13642021	13642022	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	13648746	13648747	1	A	core_nonrep	5	1	1
Rue3-1-31	4	13653132	13653133	1	C	core_nonrep	5	1	1
Rue3-1-31	4	13664633	13664634	1	G	core_nonrep	8	1	1
Rue3-1-31	4	13665659	13665660	1	T	nonrep	4	1	1
Rue3-1-31	4	13673124	13673125	1	C	core_nonrep	3	1	1
Rue3-1-31	4	13676880	13676881	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	13684450	13684451	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	13685746	13685747	3	AAT	core_nonrep	7	0.8	1
Rue3-1-31	4	13686813	13686814	1	C	core_nonrep	8	1	1
Rue3-1-31	4	13693121	13693122	1	A	core_nonrep	4	1	1
Rue3-1-31	4	13693201	13693202	1	A	core_nonrep	5	1	1
Rue3-1-31	4	13693202	13693203	1	T	core_nonrep	6	1	1
Rue3-1-31	4	13694701	13694702	1	T	core_nonrep	9	1	1
Rue3-1-31	4	13694772	13694773	1	T	core_nonrep	7	1	1
Rue3-1-31	4	13696035	13696036	1	G	nonrep	3	0.75	1
Rue3-1-31	4	13698028	13698029	1	T	core_nonrep	9	1	1
Rue3-1-31	4	13699866	13699867	1	G	core_nonrep	3	1	1
Rue3-1-31	4	13700974	13700975	1	T	core_nonrep	4	1	1
Rue3-1-31	4	13701600	13701601	2	AA	core_nonrep	13	1	1
Rue3-1-31	4	13702364	13702365	1	T	core_nonrep	9	1	1
Rue3-1-31	4	13709314	13709315	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	4	13710831	13710832	1	T	nonrep	3	0.75	1
Rue3-1-31	4	13725027	13725028	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	4	13729572	13729573	1	T	core_nonrep	4	1	1
Rue3-1-31	4	13739824	13739825	2	TC	core_nonrep	8	0.7	1
Rue3-1-31	4	13741741	13741742	2	TG	core_nonrep	14	0.857143	1
Rue3-1-31	4	13741744	13741745	1	G	core_nonrep	15	0.933333	1
Rue3-1-31	4	13742351	13742352	1	T	core_nonrep	4	1	1
Rue3-1-31	4	13742356	13742357	1	G	core_nonrep	4	1	1
Rue3-1-31	4	13746794	13746795	1	T	core_nonrep	14	1	1
Rue3-1-31	4	13750546	13750547	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	13772810	13772811	1	T	core_nonrep	8	1	1
Rue3-1-31	4	13797295	13797296	1	T	core_nonrep	14	1	1
Rue3-1-31	4	13811265	13811266	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	13815220	13815221	1	C	nonrep	4	1	1
Rue3-1-31	4	13818189	13818190	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	4	13818281	13818282	1	C	core_nonrep	12	1	1
Rue3-1-31	4	13820166	13820167	1	T	core_nonrep	7	1	1
Rue3-1-31	4	13827805	13827806	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	13831862	13831863	1	T	core_nonrep	13	1	1
Rue3-1-31	4	13837127	13837128	1	G	core_nonrep	5	0.75	1
Rue3-1-31	4	13851688	13851689	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	13857124	13857125	1	A	core_nonrep	9	0.8	1
Rue3-1-31	4	13858132	13858133	2	AG	core_nonrep	7	0.7	1
Rue3-1-31	4	13866333	13866334	1	A	core_nonrep	5	1	1
Rue3-1-31	4	13869438	13869439	1	G	core_nonrep	5	1	1
Rue3-1-31	4	13869487	13869488	1	A	core_nonrep	4	1	1
Rue3-1-31	4	13870067	13870068	1	A	core_nonrep	3	1	1
Rue3-1-31	4	13870615	13870616	1	A	core_nonrep	7	1	1
Rue3-1-31	4	13875788	13875789	1	T	core_nonrep	8	1	1
Rue3-1-31	4	13877023	13877024	1	G	core_nonrep	3	1	1
Rue3-1-31	4	13878262	13878263	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	4	13883544	13883545	1	T	core_nonrep	7	1	1
Rue3-1-31	4	13884534	13884535	1	T	core_nonrep	12	1	1
Rue3-1-31	4	13885048	13885049	1	T	core_nonrep	3	1	1
Rue3-1-31	4	13885049	13885050	1	A	core_nonrep	3	1	1
Rue3-1-31	4	13885686	13885687	1	T	nonrep	3	0.75	1
Rue3-1-31	4	13885877	13885878	1	T	core_nonrep	9	1	1
Rue3-1-31	4	13886451	13886452	2	TC	core_nonrep	11	0.75	1
Rue3-1-31	4	13896506	13896507	2	CC	core_nonrep	13	0.833333	1
Rue3-1-31	4	13901148	13901149	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	13902936	13902937	1	C	core_nonrep	14	0.916667	1
Rue3-1-31	4	13909699	13909700	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	4	13911603	13911604	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	13914830	13914831	1	A	core_nonrep	3	1	1
Rue3-1-31	4	13940228	13940229	1	A	nonrep	3	0.75	1
Rue3-1-31	4	13944122	13944123	1	G	core_nonrep	15	0.916667	1
Rue3-1-31	4	13967313	13967314	1	C	core_nonrep	8	1	1
Rue3-1-31	4	13979450	13979451	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	14012642	14012643	1	A	core_nonrep	7	1	1
Rue3-1-31	4	14018135	14018136	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	14020171	14020172	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14021462	14021463	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14037148	14037149	1	G	core_nonrep	6	1	1
Rue3-1-31	4	14037884	14037885	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	14051910	14051911	1	C	core_nonrep	7	1	1
Rue3-1-31	4	14052285	14052286	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	4	14056854	14056855	1	C	core_nonrep	15	0.833333	1
Rue3-1-31	4	14064268	14064269	1	A	core_nonrep	10	0.777778	1
Rue3-1-31	4	14067724	14067725	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	4	14072160	14072161	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	4	14075719	14075720	2	TG	core_nonrep	7	0.875	1
Rue3-1-31	4	14076358	14076359	1	A	nonrep	3	0.75	1
Rue3-1-31	4	14076381	14076382	1	A	core_nonrep	5	1	1
Rue3-1-31	4	14094629	14094630	1	T	core_nonrep	6	1	1
Rue3-1-31	4	14094631	14094632	1	A	core_nonrep	6	1	1
Rue3-1-31	4	14094821	14094822	1	G	core_nonrep	4	0.75	1
Rue3-1-31	4	14099387	14099388	1	A	core_nonrep	12	1	1
Rue3-1-31	4	14107030	14107031	1	T	core_nonrep	5	1	1
Rue3-1-31	4	14112425	14112426	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	14119515	14119516	1	A	core_nonrep	13	1	1
Rue3-1-31	4	14128106	14128107	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14128108	14128109	2	AC	core_nonrep	4	0.75	1
Rue3-1-31	4	14141825	14141826	1	T	core_nonrep	6	1	1
Rue3-1-31	4	14142700	14142701	1	T	core_nonrep	10	0.8	1
Rue3-1-31	4	14160645	14160646	3	TAC	core_nonrep	10	1	1
Rue3-1-31	4	14169715	14169716	1	T	core_nonrep	13	1	1
Rue3-1-31	4	14183591	14183592	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	4	14186544	14186545	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14186802	14186803	2	CT	core_nonrep	4	1	1
Rue3-1-31	4	14187073	14187074	1	C	core_nonrep	4	1	1
Rue3-1-31	4	14195602	14195603	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14209036	14209037	1	T	core_nonrep	10	0.9	1
Rue3-1-31	4	14212244	14212245	1	A	core_nonrep	9	1	1
Rue3-1-31	4	14213661	14213662	3	TCT	core_nonrep	9	0.888889	1
Rue3-1-31	4	14213805	14213806	3	GAA	core_nonrep	4	0.8	1
Rue3-1-31	4	14227984	14227985	1	A	core_nonrep	10	1	1
Rue3-1-31	4	14235936	14235937	1	T	core_nonrep	3	1	1
Rue3-1-31	4	14240433	14240434	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14255365	14255366	1	G	core_nonrep	10	1	1
Rue3-1-31	4	14255924	14255925	1	T	core_nonrep	3	1	1
Rue3-1-31	4	14255925	14255926	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14280178	14280179	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14308847	14308848	1	T	core_nonrep	8	1	1
Rue3-1-31	4	14310312	14310313	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	14312265	14312266	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	14333444	14333445	1	A	core_nonrep	6	0.75	1
Rue3-1-31	4	14356832	14356833	1	G	core_nonrep	4	1	1
Rue3-1-31	4	14359702	14359703	1	T	core_nonrep	8	1	1
Rue3-1-31	4	14361763	14361764	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14363786	14363787	1	T	core_nonrep	4	0.75	1
Rue3-1-31	4	14368869	14368870	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	14371212	14371213	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14371235	14371236	1	G	core_nonrep	3	1	1
Rue3-1-31	4	14373736	14373737	1	T	core_nonrep	3	1	1
Rue3-1-31	4	14385185	14385186	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	14385900	14385901	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14385976	14385977	1	T	nonrep	3	0.75	1
Rue3-1-31	4	14391625	14391626	1	A	core_nonrep	5	1	1
Rue3-1-31	4	14395153	14395154	1	A	nonrep	5	0.714286	1
Rue3-1-31	4	14399749	14399750	1	G	core_nonrep	5	1	1
Rue3-1-31	4	14404930	14404931	2	CA	core_nonrep	7	1	1
Rue3-1-31	4	14408402	14408403	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	14416211	14416212	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14434168	14434169	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	14439656	14439657	1	T	core_nonrep	7	1	1
Rue3-1-31	4	14468924	14468925	1	A	core_nonrep	6	1	1
Rue3-1-31	4	14470366	14470367	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	14492959	14492960	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	4	14511307	14511308	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	14511311	14511312	1	C	core_nonrep	6	0.8	1
Rue3-1-31	4	14511454	14511455	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14515562	14515563	1	C	core_nonrep	18	0.944444	1
Rue3-1-31	4	14529406	14529407	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14530661	14530662	1	C	nonrep	4	1	1
Rue3-1-31	4	14531269	14531270	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	14531270	14531271	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	14532250	14532251	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14532546	14532547	1	T	core_nonrep	6	1	1
Rue3-1-31	4	14543041	14543042	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14562257	14562258	1	T	core_nonrep	9	1	1
Rue3-1-31	4	14565679	14565680	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14565690	14565691	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14571920	14571921	2	TG	core_nonrep	9	0.818182	1
Rue3-1-31	4	14572991	14572992	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14574816	14574817	1	G	core_nonrep	9	1	1
Rue3-1-31	4	14575663	14575664	1	T	core_nonrep	5	1	1
Rue3-1-31	4	14576067	14576068	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	14576621	14576622	1	T	core_nonrep	5	1	1
Rue3-1-31	4	14577199	14577200	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	14579204	14579205	1	G	core_nonrep	3	1	1
Rue3-1-31	4	14582633	14582634	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	14583473	14583474	1	A	core_nonrep	7	1	1
Rue3-1-31	4	14587253	14587254	1	G	core_nonrep	5	1	1
Rue3-1-31	4	14604485	14604486	1	A	core_nonrep	7	1	1
Rue3-1-31	4	14609750	14609751	1	T	core_nonrep	13	0.9	1
Rue3-1-31	4	14625363	14625364	1	T	core_nonrep	8	1	1
Rue3-1-31	4	14627466	14627467	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	4	14627467	14627468	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	14627734	14627735	1	A	core_nonrep	5	1	1
Rue3-1-31	4	14632355	14632356	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	14639996	14639997	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14641191	14641192	3	ATG	core_nonrep	3	1	1
Rue3-1-31	4	14642798	14642799	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	14647002	14647003	1	T	core_nonrep	5	1	1
Rue3-1-31	4	14656028	14656029	1	G	core_nonrep	4	0.8	1
Rue3-1-31	4	14675500	14675501	1	A	core_nonrep	5	1	1
Rue3-1-31	4	14677199	14677200	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14694055	14694056	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	4	14708618	14708619	1	T	core_nonrep	4	1	1
Rue3-1-31	4	14713092	14713093	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14731138	14731139	1	A	core_nonrep	17	1	1
Rue3-1-31	4	14736470	14736471	1	A	core_nonrep	9	1	1
Rue3-1-31	4	14764891	14764892	1	C	core_nonrep	8	1	1
Rue3-1-31	4	14804840	14804841	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	14813848	14813849	1	G	core_nonrep	4	0.8	1
Rue3-1-31	4	14814476	14814477	1	A	core_nonrep	8	1	1
Rue3-1-31	4	14821278	14821279	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	14825166	14825167	1	T	core_nonrep	15	1	1
Rue3-1-31	4	14830415	14830416	1	A	core_nonrep	16	1	1
Rue3-1-31	4	14842784	14842785	1	T	core_nonrep	17	0.928571	1
Rue3-1-31	4	14844404	14844405	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	14846841	14846842	1	A	core_nonrep	4	1	1
Rue3-1-31	4	14852256	14852257	1	C	core_nonrep	5	1	1
Rue3-1-31	4	14887812	14887813	1	A	core_nonrep	6	1	1
Rue3-1-31	4	14892630	14892631	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	14905462	14905463	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	4	14906642	14906643	1	A	core_nonrep	11	1	1
Rue3-1-31	4	14915326	14915327	1	T	core_nonrep	9	1	1
Rue3-1-31	4	14943308	14943309	1	C	core_nonrep	4	1	1
Rue3-1-31	4	14944187	14944188	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	14947652	14947653	1	A	core_nonrep	19	0.9375	1
Rue3-1-31	4	14968325	14968326	1	A	core_nonrep	9	1	1
Rue3-1-31	4	14968458	14968459	2	AG	core_nonrep	6	1	1
Rue3-1-31	4	14980603	14980604	1	A	core_nonrep	3	1	1
Rue3-1-31	4	14981106	14981107	1	T	core_nonrep	3	1	1
Rue3-1-31	4	14981139	14981140	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	4	14985261	14985262	1	T	nonrep	3	0.75	1
Rue3-1-31	4	14998161	14998162	1	A	core_nonrep	10	1	1
Rue3-1-31	4	15006491	15006492	1	A	core_nonrep	3	1	1
Rue3-1-31	4	15006494	15006495	1	C	core_nonrep	3	1	1
Rue3-1-31	4	15007929	15007930	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	15028831	15028832	1	G	core_nonrep	11	0.9	1
Rue3-1-31	4	15033910	15033911	2	TT	core_nonrep	9	1	1
Rue3-1-31	4	15050396	15050397	1	A	core_nonrep	14	1	1
Rue3-1-31	4	15054651	15054652	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	15074550	15074551	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	15077433	15077434	1	G	core_nonrep	23	1	1
Rue3-1-31	4	15081651	15081652	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	4	15081653	15081654	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15083204	15083205	2	AA	nonrep	5	0.714286	1
Rue3-1-31	4	15092899	15092900	1	C	core_nonrep	12	1	1
Rue3-1-31	4	15098680	15098681	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	15099697	15099698	1	T	core_nonrep	7	0.7	1
Rue3-1-31	4	15099705	15099706	1	G	core_nonrep	9	0.857143	1
Rue3-1-31	4	15100098	15100099	1	T	core_nonrep	6	1	1
Rue3-1-31	4	15102751	15102752	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	15110221	15110222	1	T	core_nonrep	5	1	1
Rue3-1-31	4	15111009	15111010	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	15134546	15134547	1	A	core_nonrep	14	1	1
Rue3-1-31	4	15136809	15136810	1	A	core_nonrep	7	1	1
Rue3-1-31	4	15136812	15136813	1	G	core_nonrep	7	0.75	1
Rue3-1-31	4	15143278	15143279	1	A	core_nonrep	4	1	1
Rue3-1-31	4	15188761	15188762	1	C	core_nonrep	6	1	1
Rue3-1-31	4	15209558	15209559	1	T	core_nonrep	3	1	1
Rue3-1-31	4	15214351	15214352	2	TT	core_nonrep	3	1	1
Rue3-1-31	4	15226090	15226091	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15227602	15227603	1	T	core_nonrep	5	1	1
Rue3-1-31	4	15228972	15228973	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	4	15229961	15229962	1	A	nonrep	3	0.75	1
Rue3-1-31	4	15243012	15243013	1	T	core_nonrep	14	1	1
Rue3-1-31	4	15259481	15259482	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	15289077	15289078	1	A	nonrep	5	0.714286	1
Rue3-1-31	4	15289934	15289935	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	4	15292330	15292331	1	T	core_nonrep	5	1	1
Rue3-1-31	4	15292540	15292541	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15293906	15293907	1	T	core_nonrep	5	1	1
Rue3-1-31	4	15294474	15294475	1	T	core_nonrep	5	1	1
Rue3-1-31	4	15306887	15306888	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	15365858	15365859	1	C	core_nonrep	3	0.75	1
Rue3-1-31	4	15401450	15401451	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	4	15406662	15406663	1	T	core_nonrep	21	1	1
Rue3-1-31	4	15411750	15411751	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	4	15424621	15424622	1	A	core_nonrep	6	1	1
Rue3-1-31	4	15426355	15426356	1	C	nonrep	3	1	1
Rue3-1-31	4	15432413	15432414	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	15439912	15439913	1	A	core_nonrep	7	1	1
Rue3-1-31	4	15440215	15440216	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	15448721	15448722	2	TC	core_nonrep	3	0.75	1
Rue3-1-31	4	15454509	15454510	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	15454905	15454906	1	A	core_nonrep	4	1	1
Rue3-1-31	4	15466309	15466310	1	T	core_nonrep	6	1	1
Rue3-1-31	4	15467224	15467225	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15470377	15470378	1	A	core_nonrep	6	1	1
Rue3-1-31	4	15470694	15470695	1	T	core_nonrep	7	1	1
Rue3-1-31	4	15471047	15471048	2	TT	core_nonrep	13	1	1
Rue3-1-31	4	15471118	15471119	1	T	core_nonrep	19	1	1
Rue3-1-31	4	15473600	15473601	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	15477346	15477347	1	G	core_nonrep	3	1	1
Rue3-1-31	4	15477385	15477386	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15478645	15478646	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	15488947	15488948	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	4	15490375	15490376	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15510598	15510599	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	15513732	15513733	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	15554913	15554914	1	C	core_nonrep	15	0.857143	1
Rue3-1-31	4	15568136	15568137	1	G	core_nonrep	7	1	1
Rue3-1-31	4	15582798	15582799	1	T	core_nonrep	10	1	1
Rue3-1-31	4	15595747	15595748	1	T	core_nonrep	3	1	1
Rue3-1-31	4	15611026	15611027	1	T	core_nonrep	13	1	1
Rue3-1-31	4	15615267	15615268	1	A	nonrep	4	1	1
Rue3-1-31	4	15652650	15652651	1	T	core_nonrep	13	0.928571	1
Rue3-1-31	4	15660275	15660276	1	A	core_nonrep	7	1	1
Rue3-1-31	4	15669858	15669859	1	A	core_nonrep	7	1	1
Rue3-1-31	4	15671537	15671538	1	A	nonrep	3	0.75	1
Rue3-1-31	4	15676756	15676757	1	C	core_nonrep	3	1	1
Rue3-1-31	4	15689514	15689515	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	15690008	15690009	1	T	core_nonrep	10	1	1
Rue3-1-31	4	15691308	15691309	1	A	core_nonrep	11	1	1
Rue3-1-31	4	15692851	15692852	1	C	core_nonrep	17	1	1
Rue3-1-31	4	15694607	15694608	1	A	core_nonrep	7	1	1
Rue3-1-31	4	15694610	15694611	2	TG	core_nonrep	8	1	1
Rue3-1-31	4	15695230	15695231	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	4	15697619	15697620	1	A	core_nonrep	3	1	1
Rue3-1-31	4	15697693	15697694	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15703233	15703234	1	A	core_nonrep	16	0.928571	1
Rue3-1-31	4	15704429	15704430	1	A	core_nonrep	5	1	1
Rue3-1-31	4	15705089	15705090	1	T	core_nonrep	7	1	1
Rue3-1-31	4	15705788	15705789	1	G	core_nonrep	5	1	1
Rue3-1-31	4	15705910	15705911	1	G	core_nonrep	11	1	1
Rue3-1-31	4	15706134	15706135	1	T	nonrep	3	1	1
Rue3-1-31	4	15716564	15716565	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	15718840	15718841	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	15740858	15740859	1	A	core_nonrep	5	0.75	1
Rue3-1-31	4	15741461	15741462	1	G	core_nonrep	7	1	1
Rue3-1-31	4	15745480	15745481	1	G	core_nonrep	6	1	1
Rue3-1-31	4	15751632	15751633	1	A	nonrep	3	1	1
Rue3-1-31	4	15754065	15754066	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15786192	15786193	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15800194	15800195	1	C	core_nonrep	13	1	1
Rue3-1-31	4	15808837	15808838	1	T	core_nonrep	4	1	1
Rue3-1-31	4	15823527	15823528	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15824983	15824984	1	T	core_nonrep	10	1	1
Rue3-1-31	4	15849267	15849268	1	A	core_nonrep	8	1	1
Rue3-1-31	4	15870345	15870346	1	A	core_nonrep	4	1	1
Rue3-1-31	4	15879559	15879560	1	G	core_nonrep	10	1	1
Rue3-1-31	4	15887245	15887246	1	T	core_nonrep	3	1	1
Rue3-1-31	4	15905455	15905456	2	AA	core_nonrep	9	1	1
Rue3-1-31	4	15906879	15906880	1	A	core_nonrep	4	1	1
Rue3-1-31	4	15909746	15909747	1	C	core_nonrep	5	1	1
Rue3-1-31	4	15909845	15909846	1	A	core_nonrep	6	1	1
Rue3-1-31	4	15909848	15909849	2	GG	core_nonrep	5	1	1
Rue3-1-31	4	15910659	15910660	1	C	core_nonrep	4	1	1
Rue3-1-31	4	15917526	15917527	1	A	core_nonrep	3	1	1
Rue3-1-31	4	15924548	15924549	1	A	nonrep	3	1	1
Rue3-1-31	4	15932508	15932509	1	A	core_nonrep	3	1	1
Rue3-1-31	4	15932509	15932510	1	T	core_nonrep	3	1	1
Rue3-1-31	4	15965655	15965656	1	A	core_nonrep	8	1	1
Rue3-1-31	4	15981460	15981461	1	T	core_nonrep	8	1	1
Rue3-1-31	4	15983435	15983436	1	A	core_nonrep	11	1	1
Rue3-1-31	4	15987639	15987640	3	TTT	core_nonrep	11	1	1
Rue3-1-31	4	15993003	15993004	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	15999407	15999408	1	T	core_nonrep	6	1	1
Rue3-1-31	4	16010532	16010533	1	A	core_nonrep	6	1	1
Rue3-1-31	4	16023422	16023423	1	T	nonrep	3	1	1
Rue3-1-31	4	16037818	16037819	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	16046778	16046779	2	CG	core_nonrep	13	0.923077	1
Rue3-1-31	4	16046856	16046857	1	A	core_nonrep	11	1	1
Rue3-1-31	4	16054392	16054393	1	A	core_nonrep	4	1	1
Rue3-1-31	4	16064391	16064392	2	AT	core_nonrep	7	0.75	1
Rue3-1-31	4	16067635	16067636	1	C	core_nonrep	9	1	1
Rue3-1-31	4	16085716	16085717	2	AT	core_nonrep	5	0.714286	1
Rue3-1-31	4	16120557	16120558	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16122256	16122257	1	T	core_nonrep	11	0.8	1
Rue3-1-31	4	16130675	16130676	1	A	core_nonrep	7	1	1
Rue3-1-31	4	16133198	16133199	1	A	core_nonrep	12	1	1
Rue3-1-31	4	16134424	16134425	1	A	core_nonrep	5	1	1
Rue3-1-31	4	16135343	16135344	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16135668	16135669	1	A	core_nonrep	19	0.9	1
Rue3-1-31	4	16136779	16136780	1	G	core_nonrep	7	1	1
Rue3-1-31	4	16137172	16137173	1	A	core_nonrep	14	1	1
Rue3-1-31	4	16141688	16141689	1	T	core_nonrep	6	1	1
Rue3-1-31	4	16141866	16141867	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	4	16145064	16145065	1	A	core_nonrep	13	1	1
Rue3-1-31	4	16178773	16178774	1	T	core_nonrep	10	1	1
Rue3-1-31	4	16183826	16183827	1	T	core_nonrep	4	1	1
Rue3-1-31	4	16184011	16184012	1	G	core_nonrep	4	1	1
Rue3-1-31	4	16185757	16185758	1	G	core_nonrep	9	0.75	1
Rue3-1-31	4	16186053	16186054	1	A	core_nonrep	4	1	1
Rue3-1-31	4	16188038	16188039	1	C	core_nonrep	22	1	1
Rue3-1-31	4	16194793	16194794	1	A	core_nonrep	9	1	1
Rue3-1-31	4	16199004	16199005	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	4	16200094	16200095	2	TA	core_nonrep	9	1	1
Rue3-1-31	4	16202564	16202565	1	A	nonrep	3	0.75	1
Rue3-1-31	4	16209727	16209728	1	T	core_nonrep	10	0.777778	1
Rue3-1-31	4	16212844	16212845	1	C	core_nonrep	13	1	1
Rue3-1-31	4	16214793	16214794	1	G	core_nonrep	9	1	1
Rue3-1-31	4	16223543	16223544	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	16223544	16223545	1	T	core_nonrep	3	1	1
Rue3-1-31	4	16227296	16227297	1	A	core_nonrep	23	1	1
Rue3-1-31	4	16231804	16231805	2	AA	core_nonrep	8	0.857143	1
Rue3-1-31	4	16232224	16232225	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	16232338	16232339	1	T	core_nonrep	11	1	1
Rue3-1-31	4	16236964	16236965	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16238157	16238158	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	16238668	16238669	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16239406	16239407	1	T	nonrep	3	0.75	1
Rue3-1-31	4	16239664	16239665	1	T	core_nonrep	8	1	1
Rue3-1-31	4	16240437	16240438	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	4	16244075	16244076	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	16244152	16244153	2	TA	core_nonrep	9	1	1
Rue3-1-31	4	16244217	16244218	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16245748	16245749	1	G	core_nonrep	3	1	1
Rue3-1-31	4	16247338	16247339	1	T	core_nonrep	6	1	1
Rue3-1-31	4	16247339	16247340	2	GA	nonrep	6	0.857143	1
Rue3-1-31	4	16247501	16247502	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16247896	16247897	1	A	nonrep	5	1	1
Rue3-1-31	4	16247931	16247932	1	T	core_nonrep	4	1	1
Rue3-1-31	4	16258251	16258252	1	A	core_nonrep	8	1	1
Rue3-1-31	4	16266421	16266422	1	A	core_nonrep	12	1	1
Rue3-1-31	4	16268342	16268343	1	G	core_nonrep	26	1	1
Rue3-1-31	4	16269724	16269725	2	AG	core_nonrep	7	1	1
Rue3-1-31	4	16269725	16269726	1	G	core_nonrep	8	1	1
Rue3-1-31	4	16270580	16270581	1	C	core_nonrep	8	0.727273	1
Rue3-1-31	4	16270679	16270680	1	A	core_nonrep	4	1	1
Rue3-1-31	4	16270689	16270690	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16273835	16273836	1	T	core_nonrep	9	1	1
Rue3-1-31	4	16276180	16276181	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16276832	16276833	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16278185	16278186	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	16285037	16285038	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	4	16287903	16287904	1	A	core_nonrep	11	1	1
Rue3-1-31	4	16289096	16289097	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16289097	16289098	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16289099	16289100	1	T	core_nonrep	4	1	1
Rue3-1-31	4	16308064	16308065	1	G	core_nonrep	8	1	1
Rue3-1-31	4	16314532	16314533	2	TG	core_nonrep	5	0.8	1
Rue3-1-31	4	16317739	16317740	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16337355	16337356	1	G	core_nonrep	7	1	1
Rue3-1-31	4	16364292	16364293	1	G	core_nonrep	4	1	1
Rue3-1-31	4	16411456	16411457	3	TTG	core_nonrep	9	1	1
Rue3-1-31	4	16419806	16419807	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	4	16420914	16420915	1	T	core_nonrep	8	1	1
Rue3-1-31	4	16421086	16421087	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16421157	16421158	1	T	core_nonrep	5	1	1
Rue3-1-31	4	16421159	16421160	1	A	core_nonrep	5	1	1
Rue3-1-31	4	16431183	16431184	1	T	core_nonrep	4	1	1
Rue3-1-31	4	16448924	16448925	1	T	core_nonrep	5	1	1
Rue3-1-31	4	16449166	16449167	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	4	16470129	16470130	1	T	nonrep	3	1	1
Rue3-1-31	4	16512015	16512016	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	4	16513767	16513768	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	16525777	16525778	1	G	nonrep	3	1	1
Rue3-1-31	4	16526449	16526450	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	16528206	16528207	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	16528647	16528648	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	16528654	16528655	1	G	core_nonrep	7	1	1
Rue3-1-31	4	16529389	16529390	1	C	core_nonrep	3	1	1
Rue3-1-31	4	16536868	16536869	2	CA	core_nonrep	10	1	1
Rue3-1-31	4	16550367	16550368	2	TG	core_nonrep	4	1	1
Rue3-1-31	4	16552232	16552233	1	T	core_nonrep	8	1	1
Rue3-1-31	4	16556314	16556315	2	AA	core_nonrep	3	1	1.5
Rue3-1-31	4	16563317	16563318	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	16564921	16564922	2	AA	core_nonrep	5	0.8	1
Rue3-1-31	4	16565302	16565303	1	A	core_nonrep	11	0.9	1
Rue3-1-31	4	16585343	16585344	1	A	core_nonrep	6	1	1
Rue3-1-31	4	16585370	16585371	1	T	core_nonrep	5	1	1
Rue3-1-31	4	16587311	16587312	1	A	core_nonrep	9	0.875	1
Rue3-1-31	4	16587624	16587625	1	T	core_nonrep	3	1	1
Rue3-1-31	4	16598722	16598723	1	A	core_nonrep	5	1	1
Rue3-1-31	4	16613802	16613803	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	16625080	16625081	3	AAC	core_nonrep	8	0.888889	1
Rue3-1-31	4	16635499	16635500	1	T	core_nonrep	9	1	1
Rue3-1-31	4	16638853	16638854	1	T	core_nonrep	13	0.857143	1
Rue3-1-31	4	16645337	16645338	1	C	core_nonrep	4	0.8	1
Rue3-1-31	4	16688920	16688921	2	AA	core_nonrep	5	1	1
Rue3-1-31	4	16697693	16697694	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16700528	16700529	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	4	16701457	16701458	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	4	16704224	16704225	1	T	core_nonrep	7	1	1
Rue3-1-31	4	16704973	16704974	3	GTT	core_nonrep	6	1	1
Rue3-1-31	4	16707641	16707642	1	A	core_nonrep	3	1	1
Rue3-1-31	4	16754680	16754681	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	4	16754683	16754684	2	AA	core_nonrep	7	1	1
Rue3-1-31	4	16759052	16759053	1	A	core_nonrep	6	1	1
Rue3-1-31	4	16761080	16761081	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	16782800	16782801	1	T	core_nonrep	4	1	1
Rue3-1-31	4	16793906	16793907	1	T	core_nonrep	3	1	1
Rue3-1-31	4	16795346	16795347	1	A	core_nonrep	14	1	1
Rue3-1-31	4	16800978	16800979	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	16801620	16801621	1	A	core_nonrep	5	1	1
Rue3-1-31	4	16804440	16804441	1	C	core_nonrep	15	1	1
Rue3-1-31	4	16807920	16807921	1	G	core_nonrep	12	1	1
Rue3-1-31	4	16830720	16830721	1	G	core_nonrep	5	1	1
Rue3-1-31	4	16857382	16857383	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	16862695	16862696	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	4	16867600	16867601	1	G	core_nonrep	5	0.8	1
Rue3-1-31	4	16867602	16867603	2	TT	core_nonrep	5	1	1
Rue3-1-31	4	16873906	16873907	1	C	core_nonrep	8	1	1
Rue3-1-31	4	16877697	16877698	1	T	core_nonrep	9	1	1
Rue3-1-31	4	16880541	16880542	1	A	core_nonrep	4	1	1
Rue3-1-31	4	16881871	16881872	3	TAT	core_nonrep	7	0.857143	1
Rue3-1-31	4	16895984	16895985	1	A	core_nonrep	4	1	1
Rue3-1-31	4	16901388	16901389	1	G	core_nonrep	3	0.75	1
Rue3-1-31	4	16918589	16918590	3	AAA	core_nonrep	7	1	1
Rue3-1-31	4	16949510	16949511	2	AT	core_nonrep	12	1	1
Rue3-1-31	4	16949511	16949512	1	T	core_nonrep	15	0.818182	1
Rue3-1-31	4	16951556	16951557	1	C	core_nonrep	8	0.875	1
Rue3-1-31	4	16951743	16951744	1	T	nonrep	3	1	1
Rue3-1-31	4	16951799	16951800	1	A	core_nonrep	7	0.8	1
Rue3-1-31	4	16953665	16953666	2	TT	core_nonrep	7	0.714286	1
Rue3-1-31	4	16953989	16953990	1	G	core_nonrep	8	1	1
Rue3-1-31	4	16954477	16954478	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	16954507	16954508	1	A	core_nonrep	6	1	1
Rue3-1-31	4	16981614	16981615	1	G	core_nonrep	12	0.916667	1
Rue3-1-31	4	16989816	16989817	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	4	17001075	17001076	1	A	core_nonrep	15	0.8125	1
Rue3-1-31	4	17002697	17002698	1	C	core_nonrep	12	1	1
Rue3-1-31	4	17006685	17006686	1	T	core_nonrep	8	0.7	1
Rue3-1-31	4	17011922	17011923	1	T	nonrep	5	0.833333	1
Rue3-1-31	4	17018563	17018564	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17019348	17019349	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17019371	17019372	1	T	core_nonrep	7	1	1
Rue3-1-31	4	17020263	17020264	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17021874	17021875	1	T	core_nonrep	8	1	1
Rue3-1-31	4	17021956	17021957	1	A	core_nonrep	9	1	1
Rue3-1-31	4	17024194	17024195	3	AAT	core_nonrep	3	1	1
Rue3-1-31	4	17025151	17025152	1	C	core_nonrep	10	0.7	1
Rue3-1-31	4	17025152	17025153	1	T	core_nonrep	12	0.9	1
Rue3-1-31	4	17025153	17025154	1	T	core_nonrep	13	1	1
Rue3-1-31	4	17025206	17025207	1	T	core_nonrep	12	0.818182	1
Rue3-1-31	4	17027724	17027725	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	17030408	17030409	1	T	core_nonrep	11	1	1
Rue3-1-31	4	17032481	17032482	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	4	17032495	17032496	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	4	17038216	17038217	1	G	core_nonrep	11	1	1
Rue3-1-31	4	17038606	17038607	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	4	17049335	17049336	1	T	core_nonrep	4	1	1
Rue3-1-31	4	17050871	17050872	1	C	core_nonrep	3	1	1
Rue3-1-31	4	17051960	17051961	1	T	core_nonrep	8	1	1
Rue3-1-31	4	17053176	17053177	1	A	core_nonrep	9	0.9	1
Rue3-1-31	4	17054931	17054932	1	A	core_nonrep	16	1	1
Rue3-1-31	4	17062207	17062208	1	T	core_nonrep	5	1	1
Rue3-1-31	4	17066243	17066244	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17072699	17072700	1	T	nonrep	8	0.888889	1
Rue3-1-31	4	17077521	17077522	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17077637	17077638	1	A	core_nonrep	10	1	1
Rue3-1-31	4	17077956	17077957	1	T	core_nonrep	12	1	1
Rue3-1-31	4	17081539	17081540	1	A	core_nonrep	7	0.714286	1.2
Rue3-1-31	4	17087127	17087128	1	A	core_nonrep	10	1	1
Rue3-1-31	4	17088361	17088362	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17090873	17090874	1	G	core_nonrep	6	0.75	1
Rue3-1-31	4	17096091	17096092	1	G	core_nonrep	3	1	1
Rue3-1-31	4	17096932	17096933	1	T	core_nonrep	12	0.8	1
Rue3-1-31	4	17097017	17097018	1	A	core_nonrep	9	1	1
Rue3-1-31	4	17097458	17097459	1	T	core_nonrep	5	1	1
Rue3-1-31	4	17098257	17098258	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	17115000	17115001	2	CT	core_nonrep	5	1	1
Rue3-1-31	4	17115169	17115170	2	AC	core_nonrep	4	1	1
Rue3-1-31	4	17115580	17115581	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	17115590	17115591	2	AT	core_nonrep	3	1	1
Rue3-1-31	4	17127941	17127942	1	T	core_nonrep	8	1	1
Rue3-1-31	4	17129601	17129602	1	A	core_nonrep	17	0.866667	1
Rue3-1-31	4	17140400	17140401	1	A	nonrep	4	1	1
Rue3-1-31	4	17141071	17141072	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	17149269	17149270	1	T	core_nonrep	5	1	1
Rue3-1-31	4	17156388	17156389	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	17156389	17156390	1	T	core_nonrep	7	0.875	1
Rue3-1-31	4	17183085	17183086	1	A	core_nonrep	3	1	1
Rue3-1-31	4	17194532	17194533	2	TT	core_nonrep	4	1	1
Rue3-1-31	4	17198596	17198597	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	17200957	17200958	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17206688	17206689	1	A	core_nonrep	3	1	1
Rue3-1-31	4	17209072	17209073	1	A	core_nonrep	9	1	1
Rue3-1-31	4	17209075	17209076	1	C	core_nonrep	8	1	1
Rue3-1-31	4	17213860	17213861	1	A	nonrep	3	1	1
Rue3-1-31	4	17217224	17217225	1	T	core_nonrep	7	1	1
Rue3-1-31	4	17217252	17217253	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17227112	17227113	1	G	core_nonrep	3	1	1
Rue3-1-31	4	17227276	17227277	1	T	nonrep	3	0.75	1
Rue3-1-31	4	17227834	17227835	1	A	core_nonrep	3	1	1
Rue3-1-31	4	17229125	17229126	1	A	nonrep	3	0.75	1
Rue3-1-31	4	17229503	17229504	1	C	core_nonrep	14	1	1
Rue3-1-31	4	17237102	17237103	1	T	core_nonrep	9	1	1
Rue3-1-31	4	17250843	17250844	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	17251673	17251674	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	17254999	17255000	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	17273614	17273615	1	T	core_nonrep	17	0.8125	1
Rue3-1-31	4	17274260	17274261	1	G	core_nonrep	10	1	1
Rue3-1-31	4	17279885	17279886	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17286715	17286716	1	A	core_nonrep	12	1	1
Rue3-1-31	4	17287665	17287666	1	A	core_nonrep	8	1	1
Rue3-1-31	4	17290557	17290558	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	17295981	17295982	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17305201	17305202	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17313469	17313470	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17316222	17316223	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	4	17317684	17317685	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17317703	17317704	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	17317717	17317718	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17318050	17318051	1	A	core_nonrep	5	1	1
Rue3-1-31	4	17318794	17318795	1	A	nonrep	4	0.8	1
Rue3-1-31	4	17319605	17319606	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17322226	17322227	1	C	core_nonrep	19	1	1
Rue3-1-31	4	17322230	17322231	1	T	core_nonrep	14	1	1
Rue3-1-31	4	17325630	17325631	1	C	core_nonrep	4	1	1
Rue3-1-31	4	17325791	17325792	1	A	core_nonrep	10	1	1
Rue3-1-31	4	17330792	17330793	1	A	core_nonrep	23	0.909091	1
Rue3-1-31	4	17333538	17333539	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	4	17334812	17334813	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17339587	17339588	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17341733	17341734	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17345883	17345884	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17345884	17345885	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17351201	17351202	1	C	nonrep	4	0.8	1
Rue3-1-31	4	17351526	17351527	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	4	17352686	17352687	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	4	17353272	17353273	1	T	core_nonrep	21	1	1
Rue3-1-31	4	17354493	17354494	1	G	core_nonrep	4	0.8	1
Rue3-1-31	4	17356080	17356081	1	T	core_nonrep	4	1	1
Rue3-1-31	4	17357359	17357360	1	G	core_nonrep	6	1	1
Rue3-1-31	4	17358577	17358578	1	C	core_nonrep	7	1	1
Rue3-1-31	4	17358582	17358583	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17359510	17359511	1	T	core_nonrep	14	1	1
Rue3-1-31	4	17360257	17360258	1	A	core_nonrep	12	1	1
Rue3-1-31	4	17360805	17360806	1	A	core_nonrep	11	1	1
Rue3-1-31	4	17361265	17361266	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	17361376	17361377	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17362074	17362075	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	4	17364922	17364923	1	T	core_nonrep	8	1	1
Rue3-1-31	4	17366968	17366969	1	A	core_nonrep	19	0.894737	1
Rue3-1-31	4	17367332	17367333	1	A	core_nonrep	5	1	1
Rue3-1-31	4	17371742	17371743	2	TA	core_nonrep	8	0.888889	1
Rue3-1-31	4	17371743	17371744	1	G	core_nonrep	8	0.777778	1
Rue3-1-31	4	17373757	17373758	1	T	core_nonrep	7	1	1
Rue3-1-31	4	17376231	17376232	1	G	core_nonrep	8	0.875	1
Rue3-1-31	4	17382162	17382163	1	C	core_nonrep	8	1	1
Rue3-1-31	4	17392722	17392723	1	C	core_nonrep	7	1	1
Rue3-1-31	4	17396987	17396988	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	17396990	17396991	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17398329	17398330	1	A	core_nonrep	8	1	1
Rue3-1-31	4	17420205	17420206	1	C	core_nonrep	10	1	1
Rue3-1-31	4	17426517	17426518	2	TT	core_nonrep	8	1	1
Rue3-1-31	4	17426836	17426837	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17428026	17428027	1	G	core_nonrep	7	1	1
Rue3-1-31	4	17434022	17434023	1	G	core_nonrep	10	1	1
Rue3-1-31	4	17436190	17436191	1	T	core_nonrep	13	1	1
Rue3-1-31	4	17464284	17464285	1	C	core_nonrep	4	1	1
Rue3-1-31	4	17471883	17471884	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17473450	17473451	2	AT	core_nonrep	5	0.833333	1
Rue3-1-31	4	17476961	17476962	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17478556	17478557	1	C	core_nonrep	4	1	1
Rue3-1-31	4	17484872	17484873	1	A	core_nonrep	12	1	1
Rue3-1-31	4	17492160	17492161	3	CTA	core_nonrep	6	0.833333	1
Rue3-1-31	4	17502372	17502373	2	AG	core_nonrep	6	0.833333	1
Rue3-1-31	4	17506996	17506997	1	C	core_nonrep	7	1	1
Rue3-1-31	4	17513205	17513206	1	T	core_nonrep	12	1	1
Rue3-1-31	4	17514921	17514922	1	A	core_nonrep	5	0.8	1
Rue3-1-31	4	17515053	17515054	1	T	core_nonrep	8	1	1
Rue3-1-31	4	17516750	17516751	3	GAA	core_nonrep	3	0.75	1
Rue3-1-31	4	17522613	17522614	1	C	core_nonrep	5	0.8	1
Rue3-1-31	4	17523075	17523076	2	AT	core_nonrep	6	1	1
Rue3-1-31	4	17525232	17525233	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	17539989	17539990	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	17540105	17540106	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17541931	17541932	2	CA	core_nonrep	12	0.769231	1
Rue3-1-31	4	17558137	17558138	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17574186	17574187	1	A	core_nonrep	5	1	1
Rue3-1-31	4	17577249	17577250	1	A	nonrep	4	1	1
Rue3-1-31	4	17580126	17580127	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17583680	17583681	1	T	core_nonrep	5	1	1
Rue3-1-31	4	17586539	17586540	1	C	core_nonrep	4	1	1
Rue3-1-31	4	17596671	17596672	2	TT	core_nonrep	7	1	1
Rue3-1-31	4	17600231	17600232	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	17600232	17600233	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	17607578	17607579	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	17633703	17633704	1	T	core_nonrep	6	0.75	1
Rue3-1-31	4	17642264	17642265	3	CTT	core_nonrep	4	1	1
Rue3-1-31	4	17654387	17654388	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17675874	17675875	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	17679349	17679350	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	4	17680884	17680885	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17682902	17682903	1	T	core_nonrep	7	1	1
Rue3-1-31	4	17688320	17688321	2	TC	core_nonrep	12	0.9	1
Rue3-1-31	4	17688928	17688929	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17717709	17717710	1	T	core_nonrep	4	1	1
Rue3-1-31	4	17734546	17734547	1	A	core_nonrep	8	1	1
Rue3-1-31	4	17747285	17747286	1	T	core_nonrep	3	1	1
Rue3-1-31	4	17765094	17765095	1	C	core_nonrep	6	1	1
Rue3-1-31	4	17769289	17769290	1	T	core_nonrep	4	1	1
Rue3-1-31	4	17769736	17769737	2	CG	core_nonrep	5	1	1
Rue3-1-31	4	17770390	17770391	1	A	core_nonrep	3	1	1
Rue3-1-31	4	17770652	17770653	1	A	core_nonrep	3	1	1
Rue3-1-31	4	17772085	17772086	1	C	nonrep	3	0.75	1
Rue3-1-31	4	17772234	17772235	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	17772357	17772358	1	T	nonrep	4	1	1
Rue3-1-31	4	17779860	17779861	1	G	core_nonrep	4	1	1
Rue3-1-31	4	17789038	17789039	1	G	core_nonrep	8	1	1
Rue3-1-31	4	17789303	17789304	1	A	core_nonrep	6	1	1
Rue3-1-31	4	17790025	17790026	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	17792209	17792210	1	T	core_nonrep	10	0.833333	1
Rue3-1-31	4	17794119	17794120	1	T	core_nonrep	6	1	1
Rue3-1-31	4	17795624	17795625	1	T	core_nonrep	4	1	1
Rue3-1-31	4	17795645	17795646	1	A	nonrep	4	1	1
Rue3-1-31	4	17796140	17796141	1	A	nonrep	3	0.75	1
Rue3-1-31	4	17812124	17812125	1	G	core_nonrep	16	1	1
Rue3-1-31	4	17834576	17834577	1	G	core_nonrep	7	0.7	1
Rue3-1-31	4	17855434	17855435	1	T	core_nonrep	5	1	1
Rue3-1-31	4	17867128	17867129	1	C	core_nonrep	7	0.8	1
Rue3-1-31	4	17883962	17883963	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	4	17884269	17884270	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	4	17885195	17885196	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17886940	17886941	1	A	core_nonrep	4	1	1
Rue3-1-31	4	17899161	17899162	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	4	17902181	17902182	1	T	core_nonrep	15	0.928571	1
Rue3-1-31	4	17902384	17902385	1	T	core_nonrep	17	1	1
Rue3-1-31	4	17953924	17953925	1	G	core_nonrep	4	1	1
Rue3-1-31	4	17998120	17998121	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	18032975	18032976	1	A	core_nonrep	8	0.875	1
Rue3-1-31	4	18034465	18034466	1	C	core_nonrep	7	1	1
Rue3-1-31	4	18040026	18040027	2	CT	nonrep	3	0.75	1
Rue3-1-31	4	18050412	18050413	1	T	nonrep	3	0.75	1
Rue3-1-31	4	18051428	18051429	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	18052339	18052340	1	A	core_nonrep	4	0.75	1
Rue3-1-31	4	18052867	18052868	1	A	core_nonrep	6	1	1
Rue3-1-31	4	18052934	18052935	1	T	core_nonrep	7	1	1
Rue3-1-31	4	18054921	18054922	1	A	core_nonrep	4	1	1
Rue3-1-31	4	18059779	18059780	1	C	core_nonrep	8	1	1
Rue3-1-31	4	18063923	18063924	1	A	core_nonrep	14	1	1
Rue3-1-31	4	18071871	18071872	1	A	core_nonrep	8	1	1
Rue3-1-31	4	18074664	18074665	1	C	core_nonrep	16	1	1
Rue3-1-31	4	18078362	18078363	1	A	core_nonrep	11	0.777778	1
Rue3-1-31	4	18078365	18078366	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	4	18084628	18084629	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	18084873	18084874	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18090635	18090636	1	A	core_nonrep	8	0.7	1
Rue3-1-31	4	18090890	18090891	1	T	core_nonrep	5	1	1
Rue3-1-31	4	18096566	18096567	1	C	core_nonrep	8	0.8	1
Rue3-1-31	4	18096933	18096934	1	T	core_nonrep	5	0.8	1
Rue3-1-31	4	18096979	18096980	2	TA	core_nonrep	3	1	1
Rue3-1-31	4	18100574	18100575	2	TT	nonrep	3	1	1
Rue3-1-31	4	18118477	18118478	1	G	core_nonrep	10	1	1
Rue3-1-31	4	18131619	18131620	1	T	core_nonrep	6	1	1
Rue3-1-31	4	18142227	18142228	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	18144258	18144259	1	A	core_nonrep	9	1	1
Rue3-1-31	4	18160801	18160802	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18161385	18161386	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18162672	18162673	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	4	18163315	18163316	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18165221	18165222	1	A	core_nonrep	6	1	1
Rue3-1-31	4	18168653	18168654	1	A	core_nonrep	9	1	1
Rue3-1-31	4	18173170	18173171	1	A	core_nonrep	6	1	1
Rue3-1-31	4	18173228	18173229	1	A	core_nonrep	4	1	1
Rue3-1-31	4	18175743	18175744	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18175772	18175773	1	T	core_nonrep	5	1	1
Rue3-1-31	4	18179680	18179681	1	G	core_nonrep	8	1	1
Rue3-1-31	4	18180166	18180167	1	A	core_nonrep	6	0.8	1
Rue3-1-31	4	18181191	18181192	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	4	18185753	18185754	3	ATC	core_nonrep	16	0.9375	1
Rue3-1-31	4	18186513	18186514	1	T	nonrep	5	0.833333	1
Rue3-1-31	4	18188180	18188181	1	T	core_nonrep	12	0.846154	1
Rue3-1-31	4	18188546	18188547	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18189231	18189232	1	C	core_nonrep	11	1	1
Rue3-1-31	4	18190966	18190967	1	C	core_nonrep	9	0.7	1
Rue3-1-31	4	18191620	18191621	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18191924	18191925	1	T	core_nonrep	7	1	1
Rue3-1-31	4	18206065	18206066	1	A	core_nonrep	7	0.875	1
Rue3-1-31	4	18253291	18253292	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	18253296	18253297	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18255575	18255576	1	T	core_nonrep	5	1	1
Rue3-1-31	4	18256892	18256893	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	18261770	18261771	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18262224	18262225	1	A	nonrep	3	0.75	1
Rue3-1-31	4	18262846	18262847	1	A	core_nonrep	9	1	1
Rue3-1-31	4	18263214	18263215	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18268270	18268271	1	T	core_nonrep	6	1	1
Rue3-1-31	4	18269246	18269247	1	A	core_nonrep	7	1	1
Rue3-1-31	4	18272232	18272233	1	T	core_nonrep	6	1	1
Rue3-1-31	4	18275825	18275826	1	T	core_nonrep	5	1	1
Rue3-1-31	4	18280576	18280577	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	4	18297161	18297162	1	T	core_nonrep	6	1	1
Rue3-1-31	4	18297236	18297237	1	T	core_nonrep	4	1	1
Rue3-1-31	4	18297237	18297238	1	A	core_nonrep	4	1	1
Rue3-1-31	4	18298567	18298568	1	T	core_nonrep	9	1	1
Rue3-1-31	4	18299698	18299699	1	G	core_nonrep	10	1	1
Rue3-1-31	4	18300517	18300518	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18303902	18303903	1	A	core_nonrep	4	1	1
Rue3-1-31	4	18303916	18303917	1	G	nonrep	3	0.75	1
Rue3-1-31	4	18304629	18304630	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18304824	18304825	1	G	core_nonrep	12	0.9	1
Rue3-1-31	4	18309381	18309382	1	C	core_nonrep	4	1	1
Rue3-1-31	4	18313726	18313727	1	T	core_nonrep	6	1	1
Rue3-1-31	4	18319231	18319232	1	C	nonrep	3	0.75	1
Rue3-1-31	4	18332205	18332206	3	TAT	core_nonrep	8	0.8	1
Rue3-1-31	4	18336757	18336758	1	A	nonrep	3	1	1
Rue3-1-31	4	18355561	18355562	1	G	nonrep	7	0.7	1
Rue3-1-31	4	18356426	18356427	3	AAT	core_nonrep	6	0.857143	1
Rue3-1-31	4	18361602	18361603	1	A	core_nonrep	7	1	1
Rue3-1-31	4	18378261	18378262	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18378262	18378263	1	G	core_nonrep	4	1	1
Rue3-1-31	4	18394709	18394710	2	CT	core_nonrep	4	1	1
Rue3-1-31	4	18395894	18395895	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	4	18395895	18395896	1	G	core_nonrep	14	0.916667	1
Rue3-1-31	4	18406059	18406060	2	AT	core_nonrep	3	1	1
Rue3-1-31	4	18406060	18406061	1	C	core_nonrep	3	1	1
Rue3-1-31	4	18406673	18406674	1	T	core_nonrep	5	0.75	1
Rue3-1-31	4	18411486	18411487	1	A	core_nonrep	7	1	1
Rue3-1-31	4	18412580	18412581	1	G	core_nonrep	7	1	1
Rue3-1-31	4	18419729	18419730	1	T	core_nonrep	7	1	1
Rue3-1-31	4	18431226	18431227	1	T	core_nonrep	8	0.875	1
Rue3-1-31	4	18432076	18432077	1	A	core_nonrep	6	1	1
Rue3-1-31	4	18434377	18434378	1	C	core_nonrep	4	1	1
Rue3-1-31	4	18446127	18446128	2	AA	core_nonrep	4	1	1
Rue3-1-31	4	18448473	18448474	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	18448474	18448475	2	GA	core_nonrep	3	1	1
Rue3-1-31	4	18451457	18451458	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	4	18456852	18456853	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	4	18464675	18464676	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18467050	18467051	1	G	core_nonrep	4	1	1
Rue3-1-31	4	18468115	18468116	1	T	core_nonrep	3	0.75	1
Rue3-1-31	4	18468121	18468122	1	A	core_nonrep	3	0.75	1
Rue3-1-31	4	18472141	18472142	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	4	18482047	18482048	1	C	core_nonrep	5	1	1
Rue3-1-31	4	18483245	18483246	1	T	core_nonrep	3	1	1
Rue3-1-31	4	18484858	18484859	1	T	core_nonrep	4	0.8	1
Rue3-1-31	4	18484859	18484860	1	A	core_nonrep	4	0.8	1
Rue3-1-31	4	18485004	18485005	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18496863	18496864	1	T	core_nonrep	9	1	1
Rue3-1-31	4	18496864	18496865	2	CC	core_nonrep	9	1	1
Rue3-1-31	4	18507284	18507285	2	TT	core_nonrep	20	1	1
Rue3-1-31	4	18507285	18507286	1	G	core_nonrep	21	0.9	1
Rue3-1-31	4	18516339	18516340	1	G	nonrep	3	1	1
Rue3-1-31	4	18523306	18523307	1	A	nonrep	7	0.777778	1
Rue3-1-31	4	18523307	18523308	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	4	18524516	18524517	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18527435	18527436	1	T	nonrep	5	0.714286	1
Rue3-1-31	4	18534973	18534974	1	T	core_nonrep	5	1	1
Rue3-1-31	4	18535448	18535449	1	C	core_nonrep	11	1	1
Rue3-1-31	4	18537033	18537034	2	TA	core_nonrep	6	0.857143	1
Rue3-1-31	4	18538618	18538619	1	T	core_nonrep	10	1	1
Rue3-1-31	4	18541491	18541492	2	AC	core_nonrep	19	0.76	1
Rue3-1-31	4	18542306	18542307	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	4	18542429	18542430	1	T	core_nonrep	8	1	1
Rue3-1-31	4	18550100	18550101	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	4	18570404	18570405	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	4	18570406	18570407	2	CG	core_nonrep	10	0.8	1
Rue3-1-31	4	18574000	18574001	1	C	core_nonrep	4	1	1
Rue3-1-31	4	18580750	18580751	2	AT	core_nonrep	4	1	1
Rue3-1-31	4	18580819	18580820	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18580946	18580947	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	4	18581144	18581145	2	CT	core_nonrep	11	1	1
Rue3-1-31	4	18581341	18581342	2	GG	core_nonrep	17	0.941176	1
Rue3-1-31	4	18581538	18581539	2	AA	core_nonrep	3	1	1
Rue3-1-31	4	18581735	18581736	2	TT	core_nonrep	6	1	1
Rue3-1-31	4	18582129	18582130	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	4	18582325	18582326	1	G	core_nonrep	14	1	1
Rue3-1-31	4	18582326	18582327	1	A	core_nonrep	14	1	1
Rue3-1-31	4	18582720	18582721	2	TT	core_nonrep	3	1	1
Rue3-1-31	4	18582916	18582917	1	A	core_nonrep	3	1	1
Rue3-1-31	4	18582917	18582918	1	T	core_nonrep	3	1	1
Rue3-1-31	4	18583111	18583112	2	AC	core_nonrep	7	0.714286	1
Rue3-1-31	4	18583311	18583312	2	GG	core_nonrep	6	0.833333	1
Rue3-1-31	4	18583508	18583509	2	GG	core_nonrep	12	0.888889	1
Rue3-1-31	4	18583704	18583705	2	AG	core_nonrep	6	0.857143	1
Rue3-1-31	4	18583901	18583902	1	G	core_nonrep	5	1	1
Rue3-1-31	4	18583902	18583903	1	A	core_nonrep	5	1	1
Rue3-1-31	4	18584492	18584493	1	T	core_nonrep	13	1	1
Rue3-1-31	4	18584493	18584494	1	A	core_nonrep	13	1	1
Rue3-1-31	4	18584690	18584691	1	T	core_nonrep	3	1	1
Rue3-1-31	5	3623	3624	1	G	core_nonrep	11	1	1
Rue3-1-31	5	17549	17550	1	A	core_nonrep	7	1	1
Rue3-1-31	5	19482	19483	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	29628	29629	1	T	core_nonrep	11	0.846154	1.125
Rue3-1-31	5	32130	32131	2	CT	core_nonrep	5	1	1
Rue3-1-31	5	34556	34557	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	38160	38161	1	T	core_nonrep	9	1	1
Rue3-1-31	5	40110	40111	1	A	core_nonrep	3	1	1
Rue3-1-31	5	41021	41022	1	T	core_nonrep	4	1	1
Rue3-1-31	5	44342	44343	1	A	core_nonrep	14	1	1
Rue3-1-31	5	44726	44727	1	A	core_nonrep	6	1	1
Rue3-1-31	5	63562	63563	2	AT	core_nonrep	4	0.8	1
Rue3-1-31	5	73407	73408	1	T	core_nonrep	6	1	1
Rue3-1-31	5	73415	73416	1	T	core_nonrep	6	1	1
Rue3-1-31	5	74863	74864	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	74896	74897	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	74908	74909	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	82038	82039	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	83994	83995	1	A	core_nonrep	5	1	1
Rue3-1-31	5	95857	95858	1	C	core_nonrep	3	1	1
Rue3-1-31	5	97708	97709	1	G	core_nonrep	4	1	1
Rue3-1-31	5	97938	97939	1	T	core_nonrep	3	1	1
Rue3-1-31	5	100105	100106	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	103847	103848	1	T	core_nonrep	4	1	1
Rue3-1-31	5	104617	104618	1	G	core_nonrep	5	1	1
Rue3-1-31	5	104618	104619	2	CC	core_nonrep	6	1	1
Rue3-1-31	5	110676	110677	1	A	core_nonrep	5	1	1
Rue3-1-31	5	116288	116289	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	117239	117240	2	AT	core_nonrep	7	1	1
Rue3-1-31	5	117272	117273	1	T	core_nonrep	4	1	1
Rue3-1-31	5	137139	137140	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	5	140344	140345	1	G	core_nonrep	15	0.928571	1
Rue3-1-31	5	144781	144782	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	146594	146595	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	147207	147208	1	A	core_nonrep	12	0.8	1
Rue3-1-31	5	150458	150459	1	C	core_nonrep	3	1	1
Rue3-1-31	5	154881	154882	2	AA	core_nonrep	6	1	1
Rue3-1-31	5	154910	154911	1	G	core_nonrep	8	0.875	1
Rue3-1-31	5	155031	155032	1	A	core_nonrep	5	1	1
Rue3-1-31	5	155090	155091	1	A	core_nonrep	10	1	1
Rue3-1-31	5	155583	155584	1	A	core_nonrep	4	1	1
Rue3-1-31	5	156464	156465	1	T	nonrep	3	1	1
Rue3-1-31	5	157573	157574	1	G	core_nonrep	4	1	1
Rue3-1-31	5	157574	157575	1	A	core_nonrep	4	1	1
Rue3-1-31	5	157578	157579	1	G	core_nonrep	6	1	1
Rue3-1-31	5	158804	158805	1	A	core_nonrep	5	1	1
Rue3-1-31	5	166174	166175	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	172413	172414	1	A	core_nonrep	13	1	1
Rue3-1-31	5	179090	179091	1	T	nonrep	3	1	1
Rue3-1-31	5	192764	192765	1	T	core_nonrep	9	1	1
Rue3-1-31	5	201020	201021	1	A	core_nonrep	9	1	1
Rue3-1-31	5	205767	205768	1	T	core_nonrep	9	0.714286	1
Rue3-1-31	5	211231	211232	1	A	core_nonrep	11	1	1
Rue3-1-31	5	213383	213384	1	T	core_nonrep	6	1	1
Rue3-1-31	5	214487	214488	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	216967	216968	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	218132	218133	1	G	core_nonrep	11	1	1
Rue3-1-31	5	225978	225979	1	A	core_nonrep	14	1	1
Rue3-1-31	5	225988	225989	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	5	226825	226826	1	C	core_nonrep	9	1	1
Rue3-1-31	5	226826	226827	1	A	core_nonrep	9	1	1
Rue3-1-31	5	232122	232123	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	232859	232860	1	T	core_nonrep	7	1	1
Rue3-1-31	5	233114	233115	1	C	core_nonrep	12	0.923077	1
Rue3-1-31	5	244164	244165	1	T	core_nonrep	12	1	1
Rue3-1-31	5	255249	255250	1	T	core_nonrep	13	1	1
Rue3-1-31	5	263295	263296	1	T	core_nonrep	13	1	1
Rue3-1-31	5	272180	272181	1	C	core_nonrep	5	1	1
Rue3-1-31	5	272879	272880	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	280100	280101	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	287126	287127	1	G	core_nonrep	5	0.75	1
Rue3-1-31	5	291181	291182	1	T	core_nonrep	11	1	1
Rue3-1-31	5	296185	296186	2	AG	core_nonrep	7	1	1
Rue3-1-31	5	306957	306958	1	A	core_nonrep	5	1	1
Rue3-1-31	5	331989	331990	1	A	core_nonrep	4	1	1
Rue3-1-31	5	336723	336724	1	G	core_nonrep	6	1	1
Rue3-1-31	5	350515	350516	1	A	core_nonrep	5	1	1
Rue3-1-31	5	353662	353663	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	374994	374995	1	A	core_nonrep	10	1	1
Rue3-1-31	5	379008	379009	1	A	core_nonrep	13	0.8125	1
Rue3-1-31	5	380697	380698	1	T	nonrep	3	1	1
Rue3-1-31	5	381371	381372	1	A	core_nonrep	15	1	1
Rue3-1-31	5	381477	381478	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	382289	382290	1	T	core_nonrep	10	1	1
Rue3-1-31	5	387543	387544	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	389501	389502	1	G	core_nonrep	7	1	1
Rue3-1-31	5	392545	392546	1	A	core_nonrep	4	1	1
Rue3-1-31	5	394820	394821	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	402765	402766	1	G	core_nonrep	11	1	1
Rue3-1-31	5	404546	404547	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	408900	408901	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	408906	408907	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	409227	409228	1	A	core_nonrep	4	1	1
Rue3-1-31	5	410411	410412	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	410567	410568	1	A	core_nonrep	11	0.857143	1
Rue3-1-31	5	410702	410703	1	A	nonrep	3	1	1
Rue3-1-31	5	417531	417532	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	432336	432337	2	CT	core_nonrep	3	1	1
Rue3-1-31	5	439175	439176	1	A	core_nonrep	5	1	1
Rue3-1-31	5	440175	440176	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	442135	442136	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	444680	444681	1	T	core_nonrep	3	1	1
Rue3-1-31	5	444752	444753	1	T	core_nonrep	9	1	1
Rue3-1-31	5	445409	445410	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	445414	445415	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	447081	447082	1	A	core_nonrep	3	1	1
Rue3-1-31	5	448024	448025	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	448026	448027	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	448316	448317	1	T	core_nonrep	12	1	1
Rue3-1-31	5	454152	454153	1	A	core_nonrep	10	1	1
Rue3-1-31	5	462238	462239	1	A	core_nonrep	4	1	1
Rue3-1-31	5	463022	463023	1	T	nonrep	4	1	1
Rue3-1-31	5	464896	464897	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	5	466597	466598	1	A	core_nonrep	5	1	1
Rue3-1-31	5	470236	470237	1	C	core_nonrep	3	1	1
Rue3-1-31	5	472726	472727	1	T	core_nonrep	3	1	1
Rue3-1-31	5	472809	472810	1	T	core_nonrep	6	1	1
Rue3-1-31	5	473625	473626	1	T	core_nonrep	5	1	1
Rue3-1-31	5	473644	473645	1	G	core_nonrep	3	1	1
Rue3-1-31	5	473694	473695	1	T	core_nonrep	4	1	1
Rue3-1-31	5	482046	482047	3	CTT	core_nonrep	7	0.857143	1.22222
Rue3-1-31	5	482879	482880	1	T	core_nonrep	4	1	1
Rue3-1-31	5	483173	483174	2	GT	core_nonrep	8	1	1
Rue3-1-31	5	497907	497908	2	CT	core_nonrep	5	0.75	1
Rue3-1-31	5	497949	497950	1	A	core_nonrep	4	1	1
Rue3-1-31	5	499753	499754	1	T	core_nonrep	6	1	1.36364
Rue3-1-31	5	499755	499756	1	G	core_nonrep	6	1	1.36364
Rue3-1-31	5	499837	499838	1	C	core_nonrep	3	1	1
Rue3-1-31	5	508500	508501	1	T	core_nonrep	3	1	1
Rue3-1-31	5	508757	508758	1	C	core_nonrep	10	0.8	1
Rue3-1-31	5	512423	512424	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	512955	512956	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	513354	513355	1	A	core_nonrep	4	1	1
Rue3-1-31	5	518122	518123	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	524246	524247	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	524437	524438	1	C	core_nonrep	3	1	1
Rue3-1-31	5	526028	526029	1	G	nonrep	3	1	1
Rue3-1-31	5	528967	528968	1	T	core_nonrep	10	0.692308	1
Rue3-1-31	5	532318	532319	1	T	core_nonrep	7	1	1
Rue3-1-31	5	534738	534739	1	T	core_nonrep	6	1	1
Rue3-1-31	5	546290	546291	1	G	core_nonrep	6	0.714286	1
Rue3-1-31	5	546378	546379	1	G	core_nonrep	5	1	1
Rue3-1-31	5	549786	549787	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	5	559297	559298	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	559547	559548	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	571541	571542	1	T	nonrep	3	1	1
Rue3-1-31	5	578649	578650	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	585870	585871	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	588999	589000	3	ATT	core_nonrep	6	0.857143	1
Rue3-1-31	5	589353	589354	1	T	nonrep	3	0.75	1
Rue3-1-31	5	593458	593459	3	TAT	core_nonrep	8	0.875	1
Rue3-1-31	5	596087	596088	2	CC	core_nonrep	8	1	1
Rue3-1-31	5	598087	598088	1	A	core_nonrep	6	1	1
Rue3-1-31	5	607397	607398	1	T	core_nonrep	6	1	1
Rue3-1-31	5	615387	615388	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	621597	621598	1	A	core_nonrep	4	1	1
Rue3-1-31	5	623348	623349	1	A	core_nonrep	4	1	1
Rue3-1-31	5	626205	626206	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	5	629408	629409	1	G	core_nonrep	7	1	1
Rue3-1-31	5	656264	656265	1	C	core_nonrep	14	1	1
Rue3-1-31	5	660352	660353	1	A	core_nonrep	24	1	1
Rue3-1-31	5	671545	671546	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	672854	672855	1	N	core_nonrep	3	0.75	1
Rue3-1-31	5	675618	675619	3	AAT	core_nonrep	3	0.75	1
Rue3-1-31	5	679696	679697	1	C	core_nonrep	11	1	1
Rue3-1-31	5	679973	679974	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	680236	680237	1	A	core_nonrep	13	1	1
Rue3-1-31	5	685484	685485	1	T	core_nonrep	7	1	1
Rue3-1-31	5	702118	702119	3	AAA	core_nonrep	10	0.8	1
Rue3-1-31	5	729647	729648	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	740881	740882	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	749298	749299	1	A	nonrep	3	0.75	1
Rue3-1-31	5	756691	756692	1	C	core_nonrep	4	1	1
Rue3-1-31	5	757559	757560	1	G	core_nonrep	10	1	1
Rue3-1-31	5	760349	760350	1	A	core_nonrep	10	1	1
Rue3-1-31	5	768971	768972	1	T	core_nonrep	7	1	1
Rue3-1-31	5	771700	771701	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	776853	776854	1	A	core_nonrep	19	0.9375	1
Rue3-1-31	5	776956	776957	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	5	785428	785429	1	A	core_nonrep	5	1	1
Rue3-1-31	5	828243	828244	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	829002	829003	1	G	core_nonrep	9	1	1
Rue3-1-31	5	829006	829007	1	C	core_nonrep	6	1	1
Rue3-1-31	5	830168	830169	1	G	core_nonrep	3	1	1
Rue3-1-31	5	830475	830476	1	C	core_nonrep	9	0.9	1
Rue3-1-31	5	830717	830718	1	C	core_nonrep	3	1	1
Rue3-1-31	5	834339	834340	1	T	core_nonrep	3	1	1
Rue3-1-31	5	854024	854025	2	CC	core_nonrep	12	0.833333	1
Rue3-1-31	5	868987	868988	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	873463	873464	1	A	core_nonrep	9	1	1
Rue3-1-31	5	874226	874227	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	5	882057	882058	2	CT	core_nonrep	5	1	1
Rue3-1-31	5	882058	882059	1	G	core_nonrep	5	1	1
Rue3-1-31	5	888042	888043	1	C	core_nonrep	3	1	1
Rue3-1-31	5	888386	888387	1	C	core_nonrep	8	1	1
Rue3-1-31	5	895695	895696	1	T	core_nonrep	6	1	1
Rue3-1-31	5	912707	912708	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	924654	924655	1	A	core_nonrep	12	1	1
Rue3-1-31	5	925117	925118	1	T	core_nonrep	5	1	1
Rue3-1-31	5	930881	930882	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	951642	951643	1	A	core_nonrep	5	1	1
Rue3-1-31	5	974103	974104	1	G	core_nonrep	12	0.769231	1
Rue3-1-31	5	974104	974105	1	A	core_nonrep	12	0.785714	1
Rue3-1-31	5	974105	974106	1	A	core_nonrep	12	0.857143	1
Rue3-1-31	5	984009	984010	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	984067	984068	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	5	1004219	1004220	1	A	core_nonrep	3	1	1
Rue3-1-31	5	1017788	1017789	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	5	1042058	1042059	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	5	1043546	1043547	1	C	nonrep	3	0.75	1
Rue3-1-31	5	1043810	1043811	1	A	nonrep	4	0.8	1
Rue3-1-31	5	1050195	1050196	1	G	core_nonrep	7	1	1
Rue3-1-31	5	1055676	1055677	1	A	core_nonrep	9	1	1
Rue3-1-31	5	1062395	1062396	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	1081270	1081271	1	A	core_nonrep	7	1	1
Rue3-1-31	5	1090113	1090114	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	5	1095698	1095699	1	T	core_nonrep	4	1	1
Rue3-1-31	5	1097907	1097908	1	T	core_nonrep	8	1	1
Rue3-1-31	5	1102118	1102119	1	T	core_nonrep	11	1	1
Rue3-1-31	5	1114214	1114215	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	1136069	1136070	1	A	core_nonrep	15	0.857143	1
Rue3-1-31	5	1140487	1140488	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	1144789	1144790	1	A	core_nonrep	14	1	1
Rue3-1-31	5	1144850	1144851	2	AT	core_nonrep	8	0.875	1
Rue3-1-31	5	1185931	1185932	1	C	core_nonrep	6	1	1
Rue3-1-31	5	1187127	1187128	1	A	core_nonrep	8	1	1
Rue3-1-31	5	1188893	1188894	2	TT	core_nonrep	10	1	1
Rue3-1-31	5	1188994	1188995	1	T	core_nonrep	4	1	1
Rue3-1-31	5	1191997	1191998	1	A	core_nonrep	5	1	1
Rue3-1-31	5	1208285	1208286	1	A	core_nonrep	4	1	1
Rue3-1-31	5	1209159	1209160	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	1209571	1209572	1	T	core_nonrep	12	1	1
Rue3-1-31	5	1209876	1209877	1	C	core_nonrep	11	1	1
Rue3-1-31	5	1209877	1209878	1	G	core_nonrep	9	1	1
Rue3-1-31	5	1210651	1210652	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	1210829	1210830	2	AG	core_nonrep	15	0.785714	1
Rue3-1-31	5	1214337	1214338	1	C	core_nonrep	10	0.9	1
Rue3-1-31	5	1215297	1215298	1	T	core_nonrep	3	1	1
Rue3-1-31	5	1220291	1220292	2	AT	core_nonrep	7	0.875	1
Rue3-1-31	5	1231484	1231485	1	C	core_nonrep	3	1	1
Rue3-1-31	5	1238427	1238428	1	T	core_nonrep	3	1	1
Rue3-1-31	5	1244154	1244155	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	1252450	1252451	1	G	core_nonrep	8	1	1
Rue3-1-31	5	1252847	1252848	1	A	core_nonrep	8	1	1
Rue3-1-31	5	1256944	1256945	1	T	core_nonrep	10	1	1
Rue3-1-31	5	1257918	1257919	1	T	core_nonrep	7	1	1
Rue3-1-31	5	1258832	1258833	1	T	core_nonrep	6	1	1
Rue3-1-31	5	1264228	1264229	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	1266122	1266123	1	T	core_nonrep	10	1	1
Rue3-1-31	5	1270701	1270702	1	A	core_nonrep	3	1	1
Rue3-1-31	5	1271700	1271701	1	A	core_nonrep	6	1	1
Rue3-1-31	5	1272334	1272335	1	T	core_nonrep	7	1	1
Rue3-1-31	5	1278117	1278118	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	5	1278500	1278501	1	A	core_nonrep	6	1	1
Rue3-1-31	5	1294417	1294418	1	A	core_nonrep	14	1	1
Rue3-1-31	5	1294764	1294765	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	1294982	1294983	1	T	nonrep	5	0.714286	1
Rue3-1-31	5	1296370	1296371	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	1296372	1296373	2	AC	core_nonrep	3	0.75	1
Rue3-1-31	5	1365606	1365607	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	1377955	1377956	1	T	core_nonrep	21	0.944444	1
Rue3-1-31	5	1380286	1380287	1	A	core_nonrep	8	1	1
Rue3-1-31	5	1381257	1381258	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	1415903	1415904	1	A	core_nonrep	5	1	1
Rue3-1-31	5	1416197	1416198	1	A	nonrep	3	0.75	1
Rue3-1-31	5	1416551	1416552	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	1422624	1422625	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	1426624	1426625	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	1432410	1432411	1	T	core_nonrep	9	1	1
Rue3-1-31	5	1432447	1432448	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	1460724	1460725	1	C	core_nonrep	5	1	1
Rue3-1-31	5	1461068	1461069	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	1478050	1478051	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	1483341	1483342	3	AGT	core_nonrep	8	1	1
Rue3-1-31	5	1484023	1484024	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	1485340	1485341	1	A	core_nonrep	4	1	1
Rue3-1-31	5	1485543	1485544	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	1490859	1490860	1	T	core_nonrep	5	1	1
Rue3-1-31	5	1491338	1491339	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	1517033	1517034	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	1520098	1520099	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	1524194	1524195	2	CT	core_nonrep	7	0.75	1
Rue3-1-31	5	1524195	1524196	1	A	core_nonrep	8	1	1
Rue3-1-31	5	1527297	1527298	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	1530191	1530192	1	A	nonrep	3	0.75	1
Rue3-1-31	5	1563451	1563452	1	A	nonrep	3	1	1
Rue3-1-31	5	1566790	1566791	1	T	core_nonrep	4	1	1
Rue3-1-31	5	1569343	1569344	1	T	core_nonrep	10	0.9	1
Rue3-1-31	5	1574195	1574196	1	T	core_nonrep	7	1	1
Rue3-1-31	5	1597047	1597048	1	A	core_nonrep	3	1	1
Rue3-1-31	5	1657137	1657138	1	A	core_nonrep	6	1	1
Rue3-1-31	5	1723831	1723832	1	T	core_nonrep	5	1	1
Rue3-1-31	5	1794968	1794969	1	G	core_nonrep	3	1	1
Rue3-1-31	5	1830596	1830597	2	AT	core_nonrep	6	1	1
Rue3-1-31	5	1845052	1845053	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	1896305	1896306	1	G	core_nonrep	5	1	1
Rue3-1-31	5	1908591	1908592	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	1915537	1915538	1	T	core_nonrep	15	1	1
Rue3-1-31	5	1916050	1916051	2	TG	core_nonrep	3	1	1
Rue3-1-31	5	1916051	1916052	1	C	core_nonrep	3	1	1
Rue3-1-31	5	1928278	1928279	1	G	core_nonrep	3	1	1
Rue3-1-31	5	1928622	1928623	2	TA	core_nonrep	14	1	1
Rue3-1-31	5	1930935	1930936	2	AA	core_nonrep	8	1	1
Rue3-1-31	5	1932245	1932246	2	AG	core_nonrep	5	1	1
Rue3-1-31	5	1938539	1938540	1	G	core_nonrep	10	1	1
Rue3-1-31	5	1948637	1948638	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	5	1951326	1951327	1	T	core_nonrep	8	1	1
Rue3-1-31	5	1980803	1980804	1	T	nonrep	3	1	1
Rue3-1-31	5	1981048	1981049	3	AAA	core_nonrep	5	0.8	1
Rue3-1-31	5	1987072	1987073	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	2008423	2008424	1	T	core_nonrep	7	1	1
Rue3-1-31	5	2031279	2031280	1	A	nonrep	4	0.8	1
Rue3-1-31	5	2031396	2031397	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	2038620	2038621	1	A	core_nonrep	8	1	1
Rue3-1-31	5	2044650	2044651	1	G	core_nonrep	3	1	1
Rue3-1-31	5	2050297	2050298	1	A	core_nonrep	8	1	1
Rue3-1-31	5	2050298	2050299	1	C	core_nonrep	8	1	1
Rue3-1-31	5	2055297	2055298	1	A	core_nonrep	15	1	1
Rue3-1-31	5	2055661	2055662	1	A	core_nonrep	7	1	1
Rue3-1-31	5	2055806	2055807	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2055807	2055808	2	CA	core_nonrep	5	1	1
Rue3-1-31	5	2056575	2056576	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2062165	2062166	1	A	core_nonrep	3	1	1
Rue3-1-31	5	2063070	2063071	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	2066631	2066632	3	AAA	core_nonrep	3	1	1
Rue3-1-31	5	2067449	2067450	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	2067450	2067451	1	T	core_nonrep	8	0.75	1
Rue3-1-31	5	2069061	2069062	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	2071544	2071545	1	T	core_nonrep	9	1	1
Rue3-1-31	5	2075966	2075967	1	A	core_nonrep	4	1	1
Rue3-1-31	5	2082663	2082664	1	T	nonrep	3	0.75	1
Rue3-1-31	5	2093463	2093464	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	5	2093655	2093656	1	G	core_nonrep	4	1	1
Rue3-1-31	5	2097726	2097727	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2110289	2110290	1	T	core_nonrep	10	1	1
Rue3-1-31	5	2119742	2119743	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2126471	2126472	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2135399	2135400	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	2135400	2135401	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2138110	2138111	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	2144135	2144136	1	T	core_nonrep	7	1	1
Rue3-1-31	5	2179720	2179721	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	2182491	2182492	1	A	core_nonrep	3	1	1
Rue3-1-31	5	2182856	2182857	1	A	core_nonrep	11	1	1
Rue3-1-31	5	2189264	2189265	1	C	core_nonrep	12	1	1
Rue3-1-31	5	2191236	2191237	1	T	core_nonrep	3	1	1
Rue3-1-31	5	2198628	2198629	1	T	core_nonrep	6	1	1
Rue3-1-31	5	2199098	2199099	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2204589	2204590	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	2218136	2218137	2	TG	core_nonrep	7	1	1
Rue3-1-31	5	2220781	2220782	1	T	core_nonrep	12	1	1
Rue3-1-31	5	2221395	2221396	1	A	nonrep	5	0.714286	1
Rue3-1-31	5	2221746	2221747	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	2222331	2222332	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	2222408	2222409	1	T	nonrep	3	0.75	1
Rue3-1-31	5	2222617	2222618	1	A	core_nonrep	3	1	1
Rue3-1-31	5	2227756	2227757	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	2232505	2232506	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	2233073	2233074	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	2237942	2237943	1	T	core_nonrep	9	1	1
Rue3-1-31	5	2238609	2238610	1	C	core_nonrep	12	1	1
Rue3-1-31	5	2243210	2243211	1	A	core_nonrep	3	1	1
Rue3-1-31	5	2243211	2243212	1	C	core_nonrep	3	1	1
Rue3-1-31	5	2245157	2245158	1	T	core_nonrep	3	1	1
Rue3-1-31	5	2250817	2250818	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	2255500	2255501	1	T	core_nonrep	6	1	1
Rue3-1-31	5	2261180	2261181	1	C	nonrep	3	1	1
Rue3-1-31	5	2268406	2268407	1	T	core_nonrep	3	1	1
Rue3-1-31	5	2280230	2280231	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	5	2280483	2280484	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	2284914	2284915	1	A	nonrep	3	1	1
Rue3-1-31	5	2290603	2290604	1	T	core_nonrep	6	1	1
Rue3-1-31	5	2290668	2290669	1	C	core_nonrep	5	1	1
Rue3-1-31	5	2292593	2292594	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2293904	2293905	1	T	core_nonrep	4	1	1
Rue3-1-31	5	2294118	2294119	1	T	core_nonrep	3	1	1
Rue3-1-31	5	2294171	2294172	1	T	core_nonrep	14	1	1
Rue3-1-31	5	2298244	2298245	2	CA	core_nonrep	8	0.75	1
Rue3-1-31	5	2299017	2299018	1	T	core_nonrep	10	1	1
Rue3-1-31	5	2299081	2299082	2	TC	core_nonrep	6	0.833333	1
Rue3-1-31	5	2309586	2309587	1	G	core_nonrep	8	0.857143	1
Rue3-1-31	5	2326487	2326488	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	2326488	2326489	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	2330665	2330666	1	A	nonrep	3	1	1
Rue3-1-31	5	2354298	2354299	1	A	core_nonrep	5	1	1
Rue3-1-31	5	2356274	2356275	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	2359810	2359811	1	A	core_nonrep	5	1	1
Rue3-1-31	5	2359811	2359812	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2362677	2362678	1	A	core_nonrep	12	1	1
Rue3-1-31	5	2363217	2363218	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	2368489	2368490	1	T	nonrep	4	0.8	1
Rue3-1-31	5	2368494	2368495	1	C	core_nonrep	4	1	1
Rue3-1-31	5	2371424	2371425	1	A	core_nonrep	5	1	1
Rue3-1-31	5	2388036	2388037	1	T	core_nonrep	13	1	1
Rue3-1-31	5	2398107	2398108	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	2406062	2406063	1	C	core_nonrep	11	1	1
Rue3-1-31	5	2406064	2406065	1	T	core_nonrep	12	0.888889	1
Rue3-1-31	5	2420237	2420238	1	A	core_nonrep	5	1	1
Rue3-1-31	5	2420549	2420550	2	AC	core_nonrep	17	1	1
Rue3-1-31	5	2423026	2423027	1	T	core_nonrep	13	1	1
Rue3-1-31	5	2423413	2423414	1	G	core_nonrep	6	1	1
Rue3-1-31	5	2425655	2425656	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	2431765	2431766	2	TT	core_nonrep	11	1	1
Rue3-1-31	5	2433209	2433210	1	A	core_nonrep	4	1	1
Rue3-1-31	5	2438705	2438706	1	G	core_nonrep	3	1	1
Rue3-1-31	5	2446771	2446772	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2451810	2451811	1	A	core_nonrep	4	1	1
Rue3-1-31	5	2454182	2454183	1	A	core_nonrep	13	1	1
Rue3-1-31	5	2454366	2454367	1	T	core_nonrep	12	1	1
Rue3-1-31	5	2455380	2455381	1	A	core_nonrep	10	1	1
Rue3-1-31	5	2458596	2458597	1	A	core_nonrep	4	1	1
Rue3-1-31	5	2458621	2458622	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	2458703	2458704	2	TC	core_nonrep	5	1	1
Rue3-1-31	5	2502111	2502112	1	A	core_nonrep	3	1	1
Rue3-1-31	5	2531960	2531961	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	5	2532563	2532564	1	T	core_nonrep	7	1	1
Rue3-1-31	5	2532726	2532727	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	2532935	2532936	2	AC	core_nonrep	4	1	1
Rue3-1-31	5	2550342	2550343	1	A	core_nonrep	4	1	1
Rue3-1-31	5	2565325	2565326	1	A	core_nonrep	6	1	1
Rue3-1-31	5	2565478	2565479	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	2587938	2587939	1	A	core_nonrep	5	1	1
Rue3-1-31	5	2595187	2595188	1	C	core_nonrep	7	1	1
Rue3-1-31	5	2612553	2612554	1	T	core_nonrep	4	1	1
Rue3-1-31	5	2613851	2613852	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	2614942	2614943	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	2620631	2620632	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	2671887	2671888	1	T	core_nonrep	12	1	1
Rue3-1-31	5	2735374	2735375	1	C	core_nonrep	6	1	1
Rue3-1-31	5	2743319	2743320	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	2745119	2745120	1	C	core_nonrep	11	1	1
Rue3-1-31	5	2754104	2754105	1	T	core_nonrep	16	1	1
Rue3-1-31	5	2764847	2764848	2	AA	core_nonrep	6	1	1
Rue3-1-31	5	2768591	2768592	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	2771092	2771093	1	C	core_nonrep	5	1	1
Rue3-1-31	5	2771353	2771354	1	T	core_nonrep	11	1	1
Rue3-1-31	5	2771354	2771355	1	G	core_nonrep	11	1	1
Rue3-1-31	5	2776105	2776106	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	5	2802864	2802865	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	2851971	2851972	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	2890951	2890952	1	C	core_nonrep	4	1	1
Rue3-1-31	5	2893342	2893343	1	T	core_nonrep	10	0.9	1
Rue3-1-31	5	2910813	2910814	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	2911045	2911046	1	A	core_nonrep	8	1	1
Rue3-1-31	5	2916374	2916375	2	AA	core_nonrep	16	1	1
Rue3-1-31	5	2924160	2924161	1	T	core_nonrep	5	1	1
Rue3-1-31	5	2934764	2934765	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	2935496	2935497	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	2941149	2941150	1	T	core_nonrep	3	1	1
Rue3-1-31	5	2955467	2955468	1	A	nonrep	3	1	1
Rue3-1-31	5	2958600	2958601	1	A	core_nonrep	14	1	1
Rue3-1-31	5	2974730	2974731	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	2975221	2975222	1	T	core_nonrep	9	1	1
Rue3-1-31	5	3000658	3000659	1	T	core_nonrep	14	1	1
Rue3-1-31	5	3002758	3002759	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3008988	3008989	1	T	core_nonrep	9	1	1
Rue3-1-31	5	3009814	3009815	1	A	core_nonrep	11	0.733333	1
Rue3-1-31	5	3009817	3009818	1	T	core_nonrep	12	0.857143	1
Rue3-1-31	5	3011113	3011114	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	3038226	3038227	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3038880	3038881	1	A	core_nonrep	7	1	1
Rue3-1-31	5	3044537	3044538	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	3045340	3045341	1	T	core_nonrep	7	1	1
Rue3-1-31	5	3046312	3046313	1	T	core_nonrep	5	1	1
Rue3-1-31	5	3049378	3049379	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3049717	3049718	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	3052279	3052280	2	GT	core_nonrep	14	1	1
Rue3-1-31	5	3057718	3057719	2	AC	core_nonrep	3	1	1
Rue3-1-31	5	3057765	3057766	1	A	core_nonrep	9	1	1
Rue3-1-31	5	3062951	3062952	1	T	core_nonrep	3	1	1
Rue3-1-31	5	3065969	3065970	3	AGC	core_nonrep	4	0.8	1
Rue3-1-31	5	3068170	3068171	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3069115	3069116	1	G	core_nonrep	6	1	1
Rue3-1-31	5	3072117	3072118	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3072417	3072418	1	A	nonrep	3	1	1
Rue3-1-31	5	3072658	3072659	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3074023	3074024	1	T	core_nonrep	15	1	1
Rue3-1-31	5	3079558	3079559	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	3080344	3080345	1	C	core_nonrep	3	1	1
Rue3-1-31	5	3081508	3081509	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	3091261	3091262	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3110327	3110328	1	T	core_nonrep	8	1	1
Rue3-1-31	5	3110740	3110741	1	A	core_nonrep	5	1	1
Rue3-1-31	5	3119322	3119323	1	A	core_nonrep	9	1	1
Rue3-1-31	5	3119655	3119656	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	3127929	3127930	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	3141510	3141511	1	T	core_nonrep	6	1	1
Rue3-1-31	5	3143918	3143919	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	3145060	3145061	2	AT	core_nonrep	5	0.714286	1
Rue3-1-31	5	3148880	3148881	2	AA	core_nonrep	10	0.909091	1
Rue3-1-31	5	3162580	3162581	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	3171283	3171284	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3171908	3171909	1	C	core_nonrep	4	1	1
Rue3-1-31	5	3173661	3173662	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	3173669	3173670	1	C	core_nonrep	4	1	1
Rue3-1-31	5	3177310	3177311	3	TTA	core_nonrep	5	0.75	1
Rue3-1-31	5	3184241	3184242	2	TC	core_nonrep	10	1	1
Rue3-1-31	5	3191310	3191311	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	3191320	3191321	1	C	core_nonrep	5	1	1
Rue3-1-31	5	3191379	3191380	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3191958	3191959	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3196206	3196207	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3197527	3197528	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3198031	3198032	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	3228354	3228355	1	T	core_nonrep	12	1	1
Rue3-1-31	5	3240732	3240733	1	A	nonrep	6	0.857143	1
Rue3-1-31	5	3243516	3243517	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3243671	3243672	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	3246786	3246787	1	C	nonrep	3	0.75	1
Rue3-1-31	5	3286663	3286664	1	T	core_nonrep	7	1	1
Rue3-1-31	5	3296594	3296595	1	A	core_nonrep	8	0.75	1
Rue3-1-31	5	3299644	3299645	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3308512	3308513	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	3321646	3321647	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	5	3332685	3332686	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3343141	3343142	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	3343397	3343398	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3349144	3349145	1	G	core_nonrep	9	1	1
Rue3-1-31	5	3353428	3353429	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	5	3355194	3355195	1	T	core_nonrep	9	1	1
Rue3-1-31	5	3355264	3355265	2	AG	core_nonrep	6	1	1
Rue3-1-31	5	3355749	3355750	1	A	core_nonrep	23	1	1
Rue3-1-31	5	3356110	3356111	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	3356763	3356764	1	T	core_nonrep	12	1	1
Rue3-1-31	5	3359660	3359661	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	3359820	3359821	1	T	core_nonrep	8	1	1.09091
Rue3-1-31	5	3363161	3363162	1	A	core_nonrep	14	1	1
Rue3-1-31	5	3373228	3373229	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	3373229	3373230	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	3377636	3377637	3	CTC	core_nonrep	9	1	1
Rue3-1-31	5	3382035	3382036	1	A	core_nonrep	7	1	1
Rue3-1-31	5	3387720	3387721	1	T	core_nonrep	7	1	1
Rue3-1-31	5	3390551	3390552	1	T	core_nonrep	9	1	1
Rue3-1-31	5	3394561	3394562	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	3397350	3397351	1	G	core_nonrep	9	1	1
Rue3-1-31	5	3397507	3397508	1	T	core_nonrep	13	1	1
Rue3-1-31	5	3405935	3405936	1	C	core_nonrep	10	0.9	1
Rue3-1-31	5	3410050	3410051	2	TT	core_nonrep	6	0.8	1
Rue3-1-31	5	3463462	3463463	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	3466596	3466597	3	TTC	core_nonrep	19	1	1
Rue3-1-31	5	3468367	3468368	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	3470691	3470692	1	C	core_nonrep	4	1	1
Rue3-1-31	5	3472357	3472358	1	A	nonrep	4	0.8	1
Rue3-1-31	5	3472368	3472369	1	T	core_nonrep	5	1	1
Rue3-1-31	5	3473720	3473721	1	T	core_nonrep	12	1	1
Rue3-1-31	5	3481430	3481431	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	3491264	3491265	1	A	core_nonrep	5	1	1
Rue3-1-31	5	3516155	3516156	1	A	core_nonrep	8	1	1
Rue3-1-31	5	3530432	3530433	1	T	core_nonrep	8	1	1
Rue3-1-31	5	3541026	3541027	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	3542110	3542111	1	G	core_nonrep	3	1	1
Rue3-1-31	5	3549792	3549793	1	A	core_nonrep	9	1	1
Rue3-1-31	5	3562747	3562748	1	T	core_nonrep	8	1	1
Rue3-1-31	5	3563805	3563806	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	3576302	3576303	1	T	nonrep	3	1	1
Rue3-1-31	5	3576383	3576384	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3576920	3576921	1	T	core_nonrep	3	1	1
Rue3-1-31	5	3578684	3578685	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	5	3580243	3580244	1	T	core_nonrep	6	1	1
Rue3-1-31	5	3582762	3582763	1	T	core_nonrep	10	1	1
Rue3-1-31	5	3583536	3583537	1	G	core_nonrep	10	0.888889	1
Rue3-1-31	5	3583874	3583875	2	AT	core_nonrep	7	0.75	1
Rue3-1-31	5	3586083	3586084	1	G	core_nonrep	8	1	1
Rue3-1-31	5	3593112	3593113	1	A	core_nonrep	8	1	1
Rue3-1-31	5	3593554	3593555	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	3595535	3595536	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	5	3606015	3606016	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3607102	3607103	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	3608609	3608610	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	3609324	3609325	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	3609731	3609732	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	3610477	3610478	1	A	core_nonrep	5	1	1
Rue3-1-31	5	3620791	3620792	1	T	core_nonrep	7	1	1
Rue3-1-31	5	3627160	3627161	1	T	core_nonrep	5	1	1
Rue3-1-31	5	3640444	3640445	1	G	core_nonrep	17	1	1
Rue3-1-31	5	3641655	3641656	1	T	core_nonrep	12	1	1
Rue3-1-31	5	3643465	3643466	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3659918	3659919	1	C	core_nonrep	3	1	1
Rue3-1-31	5	3659989	3659990	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	3663793	3663794	2	AG	core_nonrep	8	0.75	1
Rue3-1-31	5	3692925	3692926	1	C	core_nonrep	3	1	1
Rue3-1-31	5	3695151	3695152	1	C	nonrep	3	0.75	1
Rue3-1-31	5	3702133	3702134	1	T	core_nonrep	6	1	1
Rue3-1-31	5	3705608	3705609	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3706994	3706995	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	3715306	3715307	1	A	nonrep	3	0.75	1
Rue3-1-31	5	3727565	3727566	1	A	nonrep	3	0.75	1
Rue3-1-31	5	3776047	3776048	1	T	core_nonrep	5	1	1
Rue3-1-31	5	3782954	3782955	2	AG	core_nonrep	6	0.833333	1
Rue3-1-31	5	3783605	3783606	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	3786508	3786509	1	T	core_nonrep	14	0.857143	1
Rue3-1-31	5	3786558	3786559	2	GG	core_nonrep	10	0.857143	1
Rue3-1-31	5	3789254	3789255	1	T	core_nonrep	3	1	1
Rue3-1-31	5	3793500	3793501	1	C	core_nonrep	7	1	1
Rue3-1-31	5	3794734	3794735	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	3797300	3797301	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3801164	3801165	1	T	core_nonrep	8	1	1
Rue3-1-31	5	3808249	3808250	1	T	core_nonrep	13	1	1
Rue3-1-31	5	3832891	3832892	1	C	core_nonrep	5	1	1
Rue3-1-31	5	3846908	3846909	3	TTT	core_nonrep	6	0.833333	1
Rue3-1-31	5	3848637	3848638	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3860284	3860285	1	G	core_nonrep	3	1	1
Rue3-1-31	5	3864556	3864557	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	5	3880272	3880273	1	A	core_nonrep	5	1	1
Rue3-1-31	5	3883708	3883709	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3883753	3883754	1	C	nonrep	4	0.8	1
Rue3-1-31	5	3887454	3887455	1	T	core_nonrep	9	1	1
Rue3-1-31	5	3893791	3893792	1	A	core_nonrep	8	1	1
Rue3-1-31	5	3896684	3896685	1	C	core_nonrep	4	1	1
Rue3-1-31	5	3899296	3899297	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3901709	3901710	1	A	core_nonrep	7	0.75	1
Rue3-1-31	5	3902641	3902642	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3920775	3920776	1	T	core_nonrep	8	1	1
Rue3-1-31	5	3922490	3922491	1	A	core_nonrep	9	0.75	1
Rue3-1-31	5	3922628	3922629	1	A	core_nonrep	10	0.875	1
Rue3-1-31	5	3924117	3924118	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	3926450	3926451	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	3927884	3927885	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	3928257	3928258	1	T	core_nonrep	12	1	1
Rue3-1-31	5	3929761	3929762	1	A	core_nonrep	6	1	1
Rue3-1-31	5	3929891	3929892	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3931198	3931199	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	3934500	3934501	2	TT	core_nonrep	8	1	1
Rue3-1-31	5	3937875	3937876	1	A	core_nonrep	5	1	1
Rue3-1-31	5	3939398	3939399	1	T	core_nonrep	4	1	1
Rue3-1-31	5	3947098	3947099	1	A	core_nonrep	3	1	1
Rue3-1-31	5	3949678	3949679	1	G	core_nonrep	9	0.875	1
Rue3-1-31	5	3953443	3953444	3	TCC	core_nonrep	14	0.785714	1
Rue3-1-31	5	3953681	3953682	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3960424	3960425	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	3968959	3968960	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	5	3987460	3987461	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	3991297	3991298	1	T	core_nonrep	6	1	1
Rue3-1-31	5	3991804	3991805	1	A	core_nonrep	4	1	1
Rue3-1-31	5	3995279	3995280	3	AAG	core_nonrep	3	1	1
Rue3-1-31	5	4041780	4041781	1	A	core_nonrep	4	1	1
Rue3-1-31	5	4051092	4051093	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	5	4092461	4092462	1	A	core_nonrep	4	1	1
Rue3-1-31	5	4100046	4100047	1	A	core_nonrep	6	1	1
Rue3-1-31	5	4102736	4102737	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	4107767	4107768	1	A	core_nonrep	13	1	1
Rue3-1-31	5	4116079	4116080	1	A	core_nonrep	9	1	1
Rue3-1-31	5	4136510	4136511	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	4151992	4151993	1	C	core_nonrep	9	1	1
Rue3-1-31	5	4152216	4152217	1	G	core_nonrep	10	0.9	1
Rue3-1-31	5	4155016	4155017	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	4162220	4162221	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4176055	4176056	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	4181284	4181285	1	A	core_nonrep	8	0.75	1.8125
Rue3-1-31	5	4181286	4181287	1	G	core_nonrep	9	0.777778	1.86667
Rue3-1-31	5	4185016	4185017	1	T	core_nonrep	8	1	1
Rue3-1-31	5	4199385	4199386	1	T	core_nonrep	6	1	1
Rue3-1-31	5	4199832	4199833	1	G	nonrep	3	1	1
Rue3-1-31	5	4203568	4203569	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	4219381	4219382	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	5	4222127	4222128	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	4230823	4230824	1	A	core_nonrep	11	1	1
Rue3-1-31	5	4230824	4230825	1	G	core_nonrep	12	1	1
Rue3-1-31	5	4231022	4231023	1	A	core_nonrep	8	1	1
Rue3-1-31	5	4240823	4240824	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4257017	4257018	1	T	core_nonrep	17	1	1
Rue3-1-31	5	4267241	4267242	1	A	core_nonrep	3	1	1
Rue3-1-31	5	4282307	4282308	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	4286211	4286212	1	A	nonrep	3	0.75	1
Rue3-1-31	5	4286519	4286520	1	T	core_nonrep	3	1	1
Rue3-1-31	5	4287638	4287639	1	T	core_nonrep	8	1	1
Rue3-1-31	5	4287903	4287904	1	A	core_nonrep	7	1	1
Rue3-1-31	5	4292580	4292581	3	TTT	core_nonrep	21	1	1
Rue3-1-31	5	4298449	4298450	1	T	core_nonrep	10	1	1
Rue3-1-31	5	4302387	4302388	1	T	core_nonrep	13	1	1
Rue3-1-31	5	4303422	4303423	1	G	core_nonrep	12	1	1
Rue3-1-31	5	4320058	4320059	1	A	core_nonrep	5	1	1
Rue3-1-31	5	4327831	4327832	1	A	core_nonrep	6	1	1
Rue3-1-31	5	4331776	4331777	1	C	core_nonrep	6	0.714286	1
Rue3-1-31	5	4341153	4341154	1	G	core_nonrep	4	1	1
Rue3-1-31	5	4341189	4341190	1	A	core_nonrep	6	1	1
Rue3-1-31	5	4341268	4341269	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	4368599	4368600	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	4381939	4381940	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	4381940	4381941	2	TT	core_nonrep	9	1	1
Rue3-1-31	5	4382772	4382773	1	A	core_nonrep	5	1	1
Rue3-1-31	5	4385252	4385253	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	5	4394546	4394547	1	C	core_nonrep	5	1	1
Rue3-1-31	5	4399897	4399898	1	A	core_nonrep	7	1	1
Rue3-1-31	5	4429131	4429132	1	T	core_nonrep	7	1	1
Rue3-1-31	5	4432119	4432120	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	4432120	4432121	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	4434398	4434399	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	5	4437364	4437365	1	A	core_nonrep	8	1	1
Rue3-1-31	5	4461266	4461267	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	5	4464441	4464442	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	4472483	4472484	1	G	core_nonrep	14	1	1
Rue3-1-31	5	4478239	4478240	1	T	core_nonrep	7	1	1
Rue3-1-31	5	4478452	4478453	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4478458	4478459	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4478478	4478479	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	4478555	4478556	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	4478903	4478904	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	4479699	4479700	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	5	4485508	4485509	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	4507097	4507098	1	A	nonrep	3	0.75	1
Rue3-1-31	5	4517164	4517165	2	CT	core_nonrep	5	1	1
Rue3-1-31	5	4519035	4519036	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	5	4521505	4521506	1	A	core_nonrep	12	1	1
Rue3-1-31	5	4527221	4527222	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	4527222	4527223	2	CC	core_nonrep	11	0.818182	1
Rue3-1-31	5	4529315	4529316	1	G	core_nonrep	3	1	1
Rue3-1-31	5	4564970	4564971	1	A	core_nonrep	19	0.941176	1
Rue3-1-31	5	4565043	4565044	1	C	core_nonrep	17	0.923077	1
Rue3-1-31	5	4567272	4567273	1	T	core_nonrep	6	1	1
Rue3-1-31	5	4568480	4568481	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	4574190	4574191	1	A	nonrep	7	0.875	1
Rue3-1-31	5	4575360	4575361	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	4575873	4575874	1	A	core_nonrep	6	1	1
Rue3-1-31	5	4587492	4587493	1	T	core_nonrep	7	1	1
Rue3-1-31	5	4588119	4588120	1	A	core_nonrep	5	1	1
Rue3-1-31	5	4590453	4590454	1	C	core_nonrep	8	0.875	1
Rue3-1-31	5	4599371	4599372	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4610306	4610307	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	4611655	4611656	1	G	core_nonrep	8	0.875	1
Rue3-1-31	5	4613560	4613561	1	C	core_nonrep	8	0.8	1
Rue3-1-31	5	4619676	4619677	1	T	nonrep	5	1	1
Rue3-1-31	5	4622761	4622762	1	T	core_nonrep	4	1	1
Rue3-1-31	5	4643102	4643103	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4645566	4645567	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	4646738	4646739	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	4646758	4646759	1	A	core_nonrep	6	1	1
Rue3-1-31	5	4647210	4647211	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	4647558	4647559	1	C	core_nonrep	8	1	1
Rue3-1-31	5	4649623	4649624	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	4652062	4652063	1	T	core_nonrep	3	1	1
Rue3-1-31	5	4658150	4658151	1	T	core_nonrep	8	1	1
Rue3-1-31	5	4676234	4676235	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	4680482	4680483	1	A	core_nonrep	3	1	1
Rue3-1-31	5	4696997	4696998	1	A	core_nonrep	8	1	1
Rue3-1-31	5	4706122	4706123	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	4722220	4722221	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	4728816	4728817	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	4730993	4730994	1	T	core_nonrep	8	1	1
Rue3-1-31	5	4731400	4731401	1	T	core_nonrep	3	1	1
Rue3-1-31	5	4733580	4733581	1	C	core_nonrep	7	0.875	1
Rue3-1-31	5	4738809	4738810	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	4739683	4739684	2	GC	core_nonrep	5	1	1
Rue3-1-31	5	4739684	4739685	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	4741659	4741660	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	4764341	4764342	2	AT	core_nonrep	7	0.777778	1
Rue3-1-31	5	4765172	4765173	1	C	core_nonrep	10	1	1
Rue3-1-31	5	4768569	4768570	1	T	core_nonrep	6	1	1
Rue3-1-31	5	4768967	4768968	1	A	core_nonrep	17	1	1
Rue3-1-31	5	4772160	4772161	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	4780510	4780511	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4801411	4801412	1	A	nonrep	5	1	1
Rue3-1-31	5	4810357	4810358	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4811000	4811001	1	C	core_nonrep	9	0.9	1
Rue3-1-31	5	4811820	4811821	2	GT	core_nonrep	5	1	1
Rue3-1-31	5	4823541	4823542	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	5	4835841	4835842	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	4840379	4840380	1	T	core_nonrep	9	1	1
Rue3-1-31	5	4840738	4840739	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4840742	4840743	1	C	core_nonrep	7	1	1
Rue3-1-31	5	4843742	4843743	1	A	core_nonrep	3	1	1
Rue3-1-31	5	4853871	4853872	1	C	core_nonrep	7	1	1
Rue3-1-31	5	4879511	4879512	1	G	core_nonrep	10	1	1
Rue3-1-31	5	4894078	4894079	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	4897842	4897843	1	A	nonrep	4	0.8	1
Rue3-1-31	5	4901884	4901885	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	4905752	4905753	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	5	4908396	4908397	1	A	core_nonrep	4	1	1
Rue3-1-31	5	4936953	4936954	1	T	core_nonrep	5	1	1
Rue3-1-31	5	4966246	4966247	1	T	core_nonrep	6	1	1
Rue3-1-31	5	4971732	4971733	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	4975685	4975686	1	T	core_nonrep	17	1	1
Rue3-1-31	5	4979205	4979206	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	5	4989749	4989750	1	T	core_nonrep	8	1	1
Rue3-1-31	5	4990232	4990233	1	A	core_nonrep	6	1	1
Rue3-1-31	5	5027282	5027283	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	5029987	5029988	1	T	core_nonrep	13	0.916667	1
Rue3-1-31	5	5033958	5033959	1	T	nonrep	6	0.857143	1
Rue3-1-31	5	5034113	5034114	3	TTC	core_nonrep	5	0.833333	1
Rue3-1-31	5	5035355	5035356	1	T	nonrep	7	0.7	1
Rue3-1-31	5	5036790	5036791	1	T	core_nonrep	5	1	1
Rue3-1-31	5	5037379	5037380	1	A	core_nonrep	6	1	1
Rue3-1-31	5	5038493	5038494	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	5055994	5055995	3	ATG	core_nonrep	14	0.8	1
Rue3-1-31	5	5065980	5065981	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5065981	5065982	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	5076258	5076259	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	5076260	5076261	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	5137253	5137254	1	G	core_nonrep	6	1	1
Rue3-1-31	5	5137989	5137990	1	C	core_nonrep	5	1	1
Rue3-1-31	5	5138028	5138029	1	A	core_nonrep	7	1	1
Rue3-1-31	5	5138139	5138140	1	A	core_nonrep	5	1	1
Rue3-1-31	5	5142895	5142896	1	T	core_nonrep	6	1	1
Rue3-1-31	5	5143569	5143570	1	A	core_nonrep	6	1	1
Rue3-1-31	5	5147574	5147575	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	5147582	5147583	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	5148910	5148911	1	C	core_nonrep	10	1	1
Rue3-1-31	5	5151369	5151370	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	5	5151371	5151372	1	C	core_nonrep	10	1	1
Rue3-1-31	5	5152818	5152819	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	5156188	5156189	1	A	core_nonrep	4	1	1
Rue3-1-31	5	5180635	5180636	1	T	core_nonrep	4	1	1
Rue3-1-31	5	5207716	5207717	3	TAT	core_nonrep	14	0.866667	1
Rue3-1-31	5	5208619	5208620	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	5209631	5209632	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5210202	5210203	1	A	core_nonrep	4	1	1
Rue3-1-31	5	5215582	5215583	1	A	core_nonrep	6	1	1
Rue3-1-31	5	5220920	5220921	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	5220921	5220922	1	C	core_nonrep	11	1	1
Rue3-1-31	5	5220963	5220964	1	G	core_nonrep	8	1	1
Rue3-1-31	5	5223120	5223121	1	A	core_nonrep	4	1	1
Rue3-1-31	5	5235613	5235614	1	C	core_nonrep	4	1	1
Rue3-1-31	5	5238462	5238463	2	CT	core_nonrep	6	1	1
Rue3-1-31	5	5251356	5251357	1	A	core_nonrep	4	1	1
Rue3-1-31	5	5253795	5253796	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	5256227	5256228	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	5256616	5256617	1	A	core_nonrep	8	1	1
Rue3-1-31	5	5262683	5262684	1	T	core_nonrep	6	1	1
Rue3-1-31	5	5262920	5262921	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	5265710	5265711	1	N	core_nonrep	4	1	1
Rue3-1-31	5	5266334	5266335	1	T	core_nonrep	5	1	1
Rue3-1-31	5	5269466	5269467	1	A	core_nonrep	20	0.9375	1
Rue3-1-31	5	5283054	5283055	1	G	core_nonrep	7	1	1
Rue3-1-31	5	5283849	5283850	1	C	core_nonrep	4	1	1
Rue3-1-31	5	5286935	5286936	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5289232	5289233	1	A	nonrep	4	0.8	1
Rue3-1-31	5	5306155	5306156	2	AT	core_nonrep	7	1	1
Rue3-1-31	5	5315717	5315718	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5331441	5331442	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	5360034	5360035	1	T	core_nonrep	4	1	1
Rue3-1-31	5	5360117	5360118	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	5362564	5362565	1	G	core_nonrep	7	1	1
Rue3-1-31	5	5364087	5364088	1	A	core_nonrep	9	1	1
Rue3-1-31	5	5389227	5389228	1	T	core_nonrep	8	1	1
Rue3-1-31	5	5397383	5397384	1	A	core_nonrep	6	1	1
Rue3-1-31	5	5397757	5397758	1	G	core_nonrep	4	1	1
Rue3-1-31	5	5397759	5397760	1	G	core_nonrep	4	1	1
Rue3-1-31	5	5400668	5400669	1	G	core_nonrep	9	0.875	1
Rue3-1-31	5	5405936	5405937	1	T	core_nonrep	13	1	1
Rue3-1-31	5	5424655	5424656	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5440260	5440261	1	G	core_nonrep	5	1	1
Rue3-1-31	5	5440325	5440326	2	TA	core_nonrep	5	1	1
Rue3-1-31	5	5440559	5440560	1	T	core_nonrep	5	1	1
Rue3-1-31	5	5440634	5440635	1	C	nonrep	3	0.75	1
Rue3-1-31	5	5443722	5443723	2	CA	core_nonrep	3	1	1
Rue3-1-31	5	5448125	5448126	2	TT	core_nonrep	8	1	1
Rue3-1-31	5	5448870	5448871	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	5452036	5452037	1	T	nonrep	3	0.75	1
Rue3-1-31	5	5474167	5474168	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	5474170	5474171	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5480013	5480014	1	T	core_nonrep	4	1	1
Rue3-1-31	5	5481755	5481756	1	A	core_nonrep	4	1	1
Rue3-1-31	5	5482501	5482502	1	A	core_nonrep	12	1	1
Rue3-1-31	5	5482598	5482599	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	5485198	5485199	1	T	core_nonrep	14	1	1
Rue3-1-31	5	5485263	5485264	2	AG	core_nonrep	4	1	1
Rue3-1-31	5	5488801	5488802	1	T	core_nonrep	9	1	1
Rue3-1-31	5	5502474	5502475	3	ATC	core_nonrep	4	0.8	1
Rue3-1-31	5	5508305	5508306	1	T	core_nonrep	13	1	1
Rue3-1-31	5	5535706	5535707	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5576801	5576802	1	T	core_nonrep	5	1	1
Rue3-1-31	5	5609548	5609549	1	T	core_nonrep	10	1	1
Rue3-1-31	5	5609897	5609898	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5638929	5638930	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	5	5702906	5702907	1	G	core_nonrep	3	1	1
Rue3-1-31	5	5799403	5799404	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	5806992	5806993	1	C	core_nonrep	10	0.8	1
Rue3-1-31	5	5808684	5808685	1	T	core_nonrep	10	1	1
Rue3-1-31	5	5815494	5815495	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	5818232	5818233	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5836180	5836181	1	A	core_nonrep	7	0.8	1
Rue3-1-31	5	5837475	5837476	1	T	core_nonrep	3	1	1
Rue3-1-31	5	5845015	5845016	1	A	nonrep	4	1	1
Rue3-1-31	5	5847925	5847926	1	T	core_nonrep	6	1	1
Rue3-1-31	5	5848256	5848257	1	T	core_nonrep	5	1	1
Rue3-1-31	5	5884023	5884024	2	AC	core_nonrep	7	1	1
Rue3-1-31	5	5891766	5891767	1	A	core_nonrep	7	1	1
Rue3-1-31	5	5895334	5895335	3	TAC	core_nonrep	8	0.888889	1
Rue3-1-31	5	5897850	5897851	1	G	core_nonrep	5	0.75	1
Rue3-1-31	5	5907169	5907170	1	T	core_nonrep	7	1	1
Rue3-1-31	5	5911149	5911150	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	5916475	5916476	1	G	core_nonrep	5	1	1
Rue3-1-31	5	5924774	5924775	1	T	core_nonrep	6	1	1
Rue3-1-31	5	5935747	5935748	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	5939640	5939641	1	T	core_nonrep	9	1	1
Rue3-1-31	5	5943940	5943941	1	T	core_nonrep	7	1	1
Rue3-1-31	5	5945195	5945196	1	A	core_nonrep	9	1	1
Rue3-1-31	5	5956760	5956761	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	5	5957190	5957191	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	5957445	5957446	1	G	nonrep	3	1	1
Rue3-1-31	5	5960332	5960333	1	T	core_nonrep	6	1	1
Rue3-1-31	5	5962156	5962157	2	CT	core_nonrep	8	0.875	1
Rue3-1-31	5	5962674	5962675	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	5	5973372	5973373	2	AA	core_nonrep	6	1	1.11111
Rue3-1-31	5	5975125	5975126	1	A	core_nonrep	7	1	1
Rue3-1-31	5	5989784	5989785	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	5994245	5994246	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	5	5998982	5998983	1	T	core_nonrep	7	0.75	1
Rue3-1-31	5	6000812	6000813	1	A	core_nonrep	3	1	1
Rue3-1-31	5	6004404	6004405	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6004934	6004935	1	A	core_nonrep	12	0.8	1
Rue3-1-31	5	6046528	6046529	1	T	core_nonrep	8	1	1
Rue3-1-31	5	6050092	6050093	1	A	core_nonrep	7	1	1
Rue3-1-31	5	6055112	6055113	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6055113	6055114	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	6056843	6056844	1	T	core_nonrep	7	1	1
Rue3-1-31	5	6056992	6056993	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	5	6057002	6057003	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6057032	6057033	1	A	core_nonrep	3	1	1
Rue3-1-31	5	6060768	6060769	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	6083472	6083473	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6104972	6104973	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	6113713	6113714	2	AA	core_nonrep	8	0.888889	1
Rue3-1-31	5	6113738	6113739	1	C	core_nonrep	4	1	1
Rue3-1-31	5	6114589	6114590	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	6114594	6114595	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	6149516	6149517	1	A	core_nonrep	12	1	1
Rue3-1-31	5	6149554	6149555	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	5	6159320	6159321	1	T	nonrep	3	0.75	1
Rue3-1-31	5	6167225	6167226	1	A	core_nonrep	6	1	1
Rue3-1-31	5	6189992	6189993	1	A	core_nonrep	11	1	1
Rue3-1-31	5	6190776	6190777	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	6193431	6193432	1	T	core_nonrep	7	1	1
Rue3-1-31	5	6194170	6194171	1	G	core_nonrep	4	1	1
Rue3-1-31	5	6196543	6196544	1	C	core_nonrep	6	1	1
Rue3-1-31	5	6201398	6201399	1	A	core_nonrep	9	1	1
Rue3-1-31	5	6203226	6203227	1	A	nonrep	3	0.75	1
Rue3-1-31	5	6203657	6203658	1	G	core_nonrep	6	1	1
Rue3-1-31	5	6204519	6204520	1	A	core_nonrep	10	1	1
Rue3-1-31	5	6204521	6204522	1	A	core_nonrep	9	1	1
Rue3-1-31	5	6213371	6213372	1	C	core_nonrep	15	1	1
Rue3-1-31	5	6214157	6214158	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	6215083	6215084	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6218210	6218211	2	CC	core_nonrep	3	0.75	1
Rue3-1-31	5	6224251	6224252	2	AT	core_nonrep	8	0.875	1
Rue3-1-31	5	6224380	6224381	2	CG	core_nonrep	4	1	1
Rue3-1-31	5	6225227	6225228	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	5	6225235	6225236	1	T	core_nonrep	10	1	1
Rue3-1-31	5	6247488	6247489	1	T	core_nonrep	20	0.941176	1
Rue3-1-31	5	6299387	6299388	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6306259	6306260	1	A	core_nonrep	10	1	1
Rue3-1-31	5	6307709	6307710	1	A	core_nonrep	10	1	1
Rue3-1-31	5	6309306	6309307	1	A	core_nonrep	7	1	1
Rue3-1-31	5	6310568	6310569	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	6317764	6317765	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	6322674	6322675	1	C	core_nonrep	4	1	1
Rue3-1-31	5	6328391	6328392	1	T	core_nonrep	4	1	1
Rue3-1-31	5	6328421	6328422	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	5	6333698	6333699	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6338334	6338335	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	6343609	6343610	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	6382724	6382725	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	6382863	6382864	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6390708	6390709	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6392339	6392340	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6399154	6399155	1	A	core_nonrep	3	1	1
Rue3-1-31	5	6413535	6413536	1	G	core_nonrep	8	1	1
Rue3-1-31	5	6421058	6421059	1	A	nonrep	3	0.75	1
Rue3-1-31	5	6422026	6422027	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	6422027	6422028	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	5	6438607	6438608	2	AA	core_nonrep	19	0.941176	1
Rue3-1-31	5	6439930	6439931	2	AC	core_nonrep	8	1	1
Rue3-1-31	5	6439931	6439932	1	A	core_nonrep	7	1	1
Rue3-1-31	5	6440297	6440298	1	G	core_nonrep	6	1	1
Rue3-1-31	5	6440729	6440730	1	A	core_nonrep	7	1	1
Rue3-1-31	5	6442679	6442680	1	G	core_nonrep	5	1	1
Rue3-1-31	5	6443306	6443307	1	A	core_nonrep	3	1	1
Rue3-1-31	5	6447323	6447324	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6449363	6449364	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	6455918	6455919	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	6458686	6458687	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6458891	6458892	1	T	core_nonrep	6	1	1
Rue3-1-31	5	6459615	6459616	1	A	core_nonrep	7	1	1
Rue3-1-31	5	6460185	6460186	1	G	nonrep	4	0.8	1
Rue3-1-31	5	6460300	6460301	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	6460303	6460304	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6461985	6461986	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	6462301	6462302	1	C	core_nonrep	13	1	1
Rue3-1-31	5	6468530	6468531	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	6474449	6474450	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6474799	6474800	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	6485073	6485074	2	AT	core_nonrep	5	1	1
Rue3-1-31	5	6486835	6486836	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	6487619	6487620	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	6487907	6487908	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6492394	6492395	1	A	core_nonrep	5	1	1
Rue3-1-31	5	6497746	6497747	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	6498818	6498819	1	A	nonrep	3	1	1
Rue3-1-31	5	6498870	6498871	1	A	core_nonrep	8	0.714286	1
Rue3-1-31	5	6499515	6499516	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	6499609	6499610	1	A	core_nonrep	13	1	1
Rue3-1-31	5	6514046	6514047	1	C	core_nonrep	15	1	1
Rue3-1-31	5	6540199	6540200	1	C	core_nonrep	3	1	1
Rue3-1-31	5	6553303	6553304	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	6554303	6554304	1	G	core_nonrep	16	1	1
Rue3-1-31	5	6565871	6565872	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6565872	6565873	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	6567722	6567723	1	A	core_nonrep	8	0.7	1
Rue3-1-31	5	6576519	6576520	2	AG	core_nonrep	6	1	1
Rue3-1-31	5	6588196	6588197	1	T	core_nonrep	6	1	1
Rue3-1-31	5	6588926	6588927	1	T	nonrep	3	1	1
Rue3-1-31	5	6601789	6601790	1	G	core_nonrep	13	1	1
Rue3-1-31	5	6604702	6604703	1	T	core_nonrep	8	1	1
Rue3-1-31	5	6615381	6615382	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	6615705	6615706	2	AA	core_nonrep	5	0.833333	1
Rue3-1-31	5	6615725	6615726	1	G	core_nonrep	5	1	1
Rue3-1-31	5	6617312	6617313	1	A	core_nonrep	3	1	1
Rue3-1-31	5	6617402	6617403	1	C	core_nonrep	4	1	1
Rue3-1-31	5	6617731	6617732	1	G	core_nonrep	9	0.8	1
Rue3-1-31	5	6640732	6640733	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	6641246	6641247	1	T	core_nonrep	3	1	1
Rue3-1-31	5	6663531	6663532	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6668949	6668950	1	T	core_nonrep	6	1	1
Rue3-1-31	5	6677671	6677672	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	5	6707673	6707674	1	T	core_nonrep	13	1	1
Rue3-1-31	5	6723793	6723794	1	T	core_nonrep	14	1	1
Rue3-1-31	5	6751290	6751291	1	T	core_nonrep	3	1	1
Rue3-1-31	5	6756544	6756545	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	6756715	6756716	1	G	core_nonrep	6	1	1
Rue3-1-31	5	6759595	6759596	1	T	core_nonrep	9	1	1
Rue3-1-31	5	6766723	6766724	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	6771778	6771779	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6789267	6789268	1	T	core_nonrep	3	1	1
Rue3-1-31	5	6789811	6789812	1	A	core_nonrep	6	1	1
Rue3-1-31	5	6790496	6790497	1	T	core_nonrep	12	1	1
Rue3-1-31	5	6794153	6794154	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	5	6794181	6794182	1	T	core_nonrep	8	1	1
Rue3-1-31	5	6795420	6795421	2	TG	nonrep	10	0.833333	1
Rue3-1-31	5	6796994	6796995	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	6807037	6807038	1	A	core_nonrep	16	1	1
Rue3-1-31	5	6809676	6809677	1	A	core_nonrep	13	0.9	1
Rue3-1-31	5	6810740	6810741	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	6812255	6812256	1	T	core_nonrep	15	0.923077	1
Rue3-1-31	5	6813652	6813653	1	T	core_nonrep	9	1	1
Rue3-1-31	5	6813842	6813843	1	A	core_nonrep	4	1	1
Rue3-1-31	5	6839072	6839073	1	T	core_nonrep	9	1	1
Rue3-1-31	5	6867482	6867483	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	6871413	6871414	1	A	core_nonrep	9	0.833333	1
Rue3-1-31	5	6877923	6877924	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	6878093	6878094	1	A	core_nonrep	6	1	1
Rue3-1-31	5	6879197	6879198	1	T	core_nonrep	6	1	1
Rue3-1-31	5	6879423	6879424	1	T	core_nonrep	7	1	1
Rue3-1-31	5	6879493	6879494	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	6880539	6880540	1	T	core_nonrep	18	0.888889	1
Rue3-1-31	5	6880680	6880681	2	TG	core_nonrep	17	1	1
Rue3-1-31	5	6881147	6881148	2	GT	core_nonrep	9	0.8	1
Rue3-1-31	5	6891182	6891183	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	5	6892842	6892843	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6903269	6903270	1	T	core_nonrep	4	1	1
Rue3-1-31	5	6904749	6904750	1	G	core_nonrep	5	1	1
Rue3-1-31	5	6905987	6905988	1	C	core_nonrep	7	1	1
Rue3-1-31	5	6997963	6997964	1	T	core_nonrep	5	1	1
Rue3-1-31	5	6998028	6998029	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	7007652	7007653	1	T	core_nonrep	3	1	1
Rue3-1-31	5	7007747	7007748	1	T	core_nonrep	3	1	1
Rue3-1-31	5	7007991	7007992	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7009088	7009089	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	7009552	7009553	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7011981	7011982	1	T	core_nonrep	10	1	1
Rue3-1-31	5	7014735	7014736	1	C	core_nonrep	10	1	1
Rue3-1-31	5	7015282	7015283	1	T	core_nonrep	7	1	1
Rue3-1-31	5	7016444	7016445	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	5	7021450	7021451	1	C	core_nonrep	3	1	1
Rue3-1-31	5	7021817	7021818	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	7021926	7021927	1	G	core_nonrep	11	1	1
Rue3-1-31	5	7021973	7021974	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	7022945	7022946	1	T	nonrep	3	1	1
Rue3-1-31	5	7024594	7024595	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7025058	7025059	1	C	core_nonrep	5	1	1
Rue3-1-31	5	7025216	7025217	1	T	core_nonrep	10	1	1
Rue3-1-31	5	7025462	7025463	3	TCT	core_nonrep	11	0.916667	1
Rue3-1-31	5	7025578	7025579	1	A	core_nonrep	14	1	1
Rue3-1-31	5	7027814	7027815	1	C	core_nonrep	19	0.933333	1
Rue3-1-31	5	7036515	7036516	1	T	core_nonrep	18	0.75	1
Rue3-1-31	5	7038991	7038992	1	C	core_nonrep	10	0.714286	1
Rue3-1-31	5	7039711	7039712	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7041051	7041052	1	A	core_nonrep	7	1	1
Rue3-1-31	5	7041054	7041055	1	T	core_nonrep	6	1	1
Rue3-1-31	5	7043964	7043965	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	7046087	7046088	1	G	core_nonrep	14	1	1
Rue3-1-31	5	7046088	7046089	2	CC	core_nonrep	15	0.846154	1
Rue3-1-31	5	7046221	7046222	1	C	core_nonrep	4	1	1
Rue3-1-31	5	7046312	7046313	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7047751	7047752	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7048047	7048048	1	T	core_nonrep	3	1	1
Rue3-1-31	5	7048660	7048661	1	A	core_nonrep	4	1	1
Rue3-1-31	5	7049294	7049295	1	C	core_nonrep	3	1	1
Rue3-1-31	5	7049484	7049485	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7050424	7050425	1	C	core_nonrep	12	0.888889	1
Rue3-1-31	5	7050526	7050527	2	TC	core_nonrep	3	1	1
Rue3-1-31	5	7052293	7052294	1	T	core_nonrep	15	0.928571	1
Rue3-1-31	5	7052296	7052297	1	A	core_nonrep	17	0.916667	1
Rue3-1-31	5	7052581	7052582	1	A	core_nonrep	4	1	1
Rue3-1-31	5	7052782	7052783	1	G	core_nonrep	8	0.875	1
Rue3-1-31	5	7053703	7053704	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7054119	7054120	2	AT	core_nonrep	7	1	1
Rue3-1-31	5	7055429	7055430	1	C	core_nonrep	7	0.75	1
Rue3-1-31	5	7058715	7058716	1	G	core_nonrep	5	1	1
Rue3-1-31	5	7058735	7058736	1	A	core_nonrep	7	1	1
Rue3-1-31	5	7069135	7069136	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7072926	7072927	1	G	core_nonrep	19	0.947368	1
Rue3-1-31	5	7074758	7074759	1	A	nonrep	3	0.75	1
Rue3-1-31	5	7111367	7111368	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	7112516	7112517	1	A	core_nonrep	4	1	1
Rue3-1-31	5	7128579	7128580	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7132854	7132855	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	5	7141942	7141943	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	7142307	7142308	2	AT	core_nonrep	4	0.8	1
Rue3-1-31	5	7177916	7177917	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7192281	7192282	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	5	7192282	7192283	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	5	7192316	7192317	1	T	core_nonrep	12	1	1
Rue3-1-31	5	7199345	7199346	1	G	core_nonrep	9	0.692308	1
Rue3-1-31	5	7205919	7205920	1	T	core_nonrep	10	1	1
Rue3-1-31	5	7206725	7206726	1	T	nonrep	3	0.75	1
Rue3-1-31	5	7207461	7207462	1	C	core_nonrep	7	0.7	1
Rue3-1-31	5	7207462	7207463	2	TT	core_nonrep	8	0.8	1
Rue3-1-31	5	7207663	7207664	1	T	core_nonrep	11	1	1
Rue3-1-31	5	7224349	7224350	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7225466	7225467	1	G	core_nonrep	5	1	1
Rue3-1-31	5	7229645	7229646	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	7231174	7231175	1	T	nonrep	3	1	1
Rue3-1-31	5	7231423	7231424	1	A	nonrep	3	0.75	1
Rue3-1-31	5	7232966	7232967	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7241212	7241213	1	T	nonrep	3	1	1
Rue3-1-31	5	7260006	7260007	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	5	7264513	7264514	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7273384	7273385	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	5	7287368	7287369	1	G	core_nonrep	16	1	1
Rue3-1-31	5	7296712	7296713	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	5	7296723	7296724	1	A	core_nonrep	10	1	1
Rue3-1-31	5	7308044	7308045	2	AG	core_nonrep	5	1	1
Rue3-1-31	5	7320934	7320935	1	G	nonrep	3	1	1
Rue3-1-31	5	7321359	7321360	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7321612	7321613	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	7323454	7323455	3	ACG	core_nonrep	10	1	1
Rue3-1-31	5	7337381	7337382	1	T	core_nonrep	11	1	1
Rue3-1-31	5	7337906	7337907	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7338488	7338489	1	A	core_nonrep	7	1	1
Rue3-1-31	5	7338792	7338793	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7339766	7339767	1	A	nonrep	3	1	1
Rue3-1-31	5	7340272	7340273	1	A	core_nonrep	12	0.888889	1
Rue3-1-31	5	7341856	7341857	3	AAA	core_nonrep	4	0.8	1
Rue3-1-31	5	7342399	7342400	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7343594	7343595	1	C	nonrep	3	0.75	1
Rue3-1-31	5	7343780	7343781	1	T	core_nonrep	7	1	1
Rue3-1-31	5	7344466	7344467	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	7346408	7346409	2	CG	core_nonrep	12	1	1
Rue3-1-31	5	7346449	7346450	1	T	core_nonrep	13	1	1
Rue3-1-31	5	7346586	7346587	1	A	core_nonrep	7	1	1
Rue3-1-31	5	7522245	7522246	2	AA	core_nonrep	12	1	1
Rue3-1-31	5	7525952	7525953	1	A	core_nonrep	8	1	1
Rue3-1-31	5	7527838	7527839	1	T	core_nonrep	3	1	1
Rue3-1-31	5	7528217	7528218	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	7528476	7528477	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7532373	7532374	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7535487	7535488	1	T	core_nonrep	7	1	1
Rue3-1-31	5	7536695	7536696	1	A	core	3	0.75	1.25
Rue3-1-31	5	7539753	7539754	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	7545289	7545290	1	C	core_nonrep	7	0.777778	1
Rue3-1-31	5	7548629	7548630	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	7565778	7565779	1	A	core_nonrep	9	1	1
Rue3-1-31	5	7566979	7566980	1	C	core_nonrep	5	1	1
Rue3-1-31	5	7566981	7566982	2	AT	core_nonrep	5	0.8	1
Rue3-1-31	5	7583724	7583725	1	G	core_nonrep	11	1	1
Rue3-1-31	5	7589531	7589532	1	C	core_nonrep	4	1	1
Rue3-1-31	5	7589802	7589803	1	A	core_nonrep	12	0.9	1
Rue3-1-31	5	7593875	7593876	1	A	core_nonrep	9	1	1
Rue3-1-31	5	7598873	7598874	1	T	core_nonrep	9	0.8	1
Rue3-1-31	5	7611458	7611459	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	7612905	7612906	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7614803	7614804	1	T	core_nonrep	10	1	0.916667
Rue3-1-31	5	7634252	7634253	1	G	core_nonrep	15	1	1
Rue3-1-31	5	7651268	7651269	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	5	7662709	7662710	1	T	core_nonrep	15	1	1
Rue3-1-31	5	7663491	7663492	1	T	core_nonrep	6	1	1
Rue3-1-31	5	7663492	7663493	1	T	core_nonrep	6	1	1
Rue3-1-31	5	7664065	7664066	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	7664119	7664120	1	C	core_nonrep	5	1	1
Rue3-1-31	5	7667449	7667450	2	AA	core_nonrep	9	1	1
Rue3-1-31	5	7671674	7671675	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7672656	7672657	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	5	7677573	7677574	2	TT	core_nonrep	7	1	1
Rue3-1-31	5	7690136	7690137	1	G	core_nonrep	6	1	1
Rue3-1-31	5	7692762	7692763	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	5	7693653	7693654	1	T	core_nonrep	10	1	1
Rue3-1-31	5	7694656	7694657	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	7698083	7698084	1	T	core_nonrep	7	1	1
Rue3-1-31	5	7701725	7701726	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	5	7706805	7706806	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7706835	7706836	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7709323	7709324	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7713818	7713819	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	7713972	7713973	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7714491	7714492	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	7717080	7717081	1	C	core_nonrep	11	1	1
Rue3-1-31	5	7718926	7718927	2	TA	core_nonrep	7	1	1
Rue3-1-31	5	7736744	7736745	2	TG	core_nonrep	7	1	1
Rue3-1-31	5	7737042	7737043	1	G	core_nonrep	11	1	1
Rue3-1-31	5	7739592	7739593	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	7780573	7780574	1	C	core_nonrep	10	1	1
Rue3-1-31	5	7795887	7795888	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	7799721	7799722	1	A	nonrep	3	0.75	1
Rue3-1-31	5	7802742	7802743	1	A	core_nonrep	11	0.777778	1
Rue3-1-31	5	7802918	7802919	2	GT	core_nonrep	8	1	1
Rue3-1-31	5	7803113	7803114	1	T	core_nonrep	3	1	1
Rue3-1-31	5	7803339	7803340	1	C	nonrep	6	1	1
Rue3-1-31	5	7804350	7804351	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	7809276	7809277	2	GT	core_nonrep	8	1	1
Rue3-1-31	5	7811486	7811487	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7811658	7811659	2	TA	core_nonrep	7	1	1
Rue3-1-31	5	7815956	7815957	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	7815966	7815967	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7816358	7816359	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	7818634	7818635	1	G	core_nonrep	4	0.75	1.4
Rue3-1-31	5	7822013	7822014	1	A	core_nonrep	4	1	1
Rue3-1-31	5	7823829	7823830	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7824500	7824501	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7824777	7824778	1	T	core_nonrep	6	1	1
Rue3-1-31	5	7829569	7829570	2	CT	core_nonrep	3	0.75	1
Rue3-1-31	5	7835970	7835971	1	A	nonrep	3	1	1
Rue3-1-31	5	7842176	7842177	1	T	nonrep	3	0.75	1
Rue3-1-31	5	7860989	7860990	1	A	core_nonrep	5	1	1
Rue3-1-31	5	7866164	7866165	1	T	core_nonrep	6	1	1
Rue3-1-31	5	7870573	7870574	1	A	core_nonrep	8	1	1
Rue3-1-31	5	7874675	7874676	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7876627	7876628	1	G	core_nonrep	19	0.882353	1
Rue3-1-31	5	7876628	7876629	1	A	core_nonrep	22	0.9	1
Rue3-1-31	5	7876629	7876630	1	A	core_nonrep	22	1	1
Rue3-1-31	5	7883072	7883073	1	T	core_nonrep	9	1	1
Rue3-1-31	5	7884974	7884975	1	T	core_nonrep	14	1	1
Rue3-1-31	5	7885358	7885359	1	T	core_nonrep	4	1	1.25
Rue3-1-31	5	7887476	7887477	2	CC	core_nonrep	12	0.818182	1
Rue3-1-31	5	7891066	7891067	1	A	core_nonrep	6	1	1
Rue3-1-31	5	7892715	7892716	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7892942	7892943	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7893605	7893606	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7893625	7893626	1	A	core_nonrep	8	1	1
Rue3-1-31	5	7909748	7909749	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	7918413	7918414	1	C	core_nonrep	15	1	1
Rue3-1-31	5	7922597	7922598	1	A	core_nonrep	9	1	1
Rue3-1-31	5	7922806	7922807	1	A	core_nonrep	3	1	1
Rue3-1-31	5	7923958	7923959	1	T	core_nonrep	8	1	1
Rue3-1-31	5	7924857	7924858	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7926365	7926366	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7932551	7932552	1	C	nonrep	3	1	1
Rue3-1-31	5	7932788	7932789	2	TT	core_nonrep	6	0.8	1
Rue3-1-31	5	7941859	7941860	1	A	core_nonrep	4	1	1
Rue3-1-31	5	7941887	7941888	1	T	core_nonrep	5	1	1
Rue3-1-31	5	7957271	7957272	2	TG	core_nonrep	18	0.875	1
Rue3-1-31	5	7969556	7969557	1	A	nonrep	3	0.75	1
Rue3-1-31	5	7970343	7970344	1	A	core_nonrep	7	1	1
Rue3-1-31	5	7974298	7974299	1	T	core_nonrep	4	1	1
Rue3-1-31	5	7977283	7977284	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	5	7998092	7998093	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	7998094	7998095	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8006737	8006738	1	A	nonrep	3	1	1
Rue3-1-31	5	8011235	8011236	1	A	core_nonrep	9	1	1
Rue3-1-31	5	8011571	8011572	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8013509	8013510	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	5	8013510	8013511	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	5	8017203	8017204	1	C	core_nonrep	8	0.875	1
Rue3-1-31	5	8019432	8019433	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8022258	8022259	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8024136	8024137	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8024171	8024172	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8027199	8027200	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8027289	8027290	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	8037386	8037387	1	T	core_nonrep	5	1	1
Rue3-1-31	5	8043464	8043465	1	G	nonrep	6	0.857143	1
Rue3-1-31	5	8045729	8045730	1	C	core_nonrep	8	1	1
Rue3-1-31	5	8047865	8047866	1	G	core_nonrep	4	1	1
Rue3-1-31	5	8048470	8048471	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8049265	8049266	1	A	nonrep	3	0.75	1
Rue3-1-31	5	8053524	8053525	1	A	core_nonrep	9	1	1
Rue3-1-31	5	8058705	8058706	1	C	core_nonrep	5	1	1
Rue3-1-31	5	8064006	8064007	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8064007	8064008	1	C	core_nonrep	7	1	1
Rue3-1-31	5	8064946	8064947	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8065083	8065084	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	8065927	8065928	1	A	nonrep	3	0.75	1
Rue3-1-31	5	8070959	8070960	2	AG	core_nonrep	11	0.9	1
Rue3-1-31	5	8081733	8081734	1	A	nonrep	6	0.75	1
Rue3-1-31	5	8133287	8133288	1	T	core_nonrep	8	1	1
Rue3-1-31	5	8145887	8145888	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	8154306	8154307	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8161505	8161506	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8162810	8162811	1	G	core_nonrep	5	1	1
Rue3-1-31	5	8171276	8171277	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	5	8177103	8177104	1	G	core_nonrep	3	1	1
Rue3-1-31	5	8177203	8177204	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8177390	8177391	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	8190524	8190525	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8194165	8194166	1	G	nonrep	5	1	1
Rue3-1-31	5	8195043	8195044	1	C	nonrep	3	0.75	1
Rue3-1-31	5	8195223	8195224	1	T	nonrep	3	1	1
Rue3-1-31	5	8195817	8195818	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8198556	8198557	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8198557	8198558	1	G	nonrep	3	0.75	1
Rue3-1-31	5	8200793	8200794	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8201416	8201417	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8202585	8202586	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	8202892	8202893	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8203237	8203238	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8203438	8203439	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8205870	8205871	3	CAA	core_nonrep	7	0.875	1
Rue3-1-31	5	8210520	8210521	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8220150	8220151	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	5	8220915	8220916	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8225244	8225245	3	ATG	core_nonrep	6	1	1
Rue3-1-31	5	8229047	8229048	1	T	core_nonrep	5	1	1
Rue3-1-31	5	8241248	8241249	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	8241883	8241884	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8242779	8242780	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	8243980	8243981	3	CTT	core_nonrep	6	1	1
Rue3-1-31	5	8244953	8244954	1	A	core_nonrep	24	0.95	1
Rue3-1-31	5	8245173	8245174	1	T	core_nonrep	11	0.727273	1
Rue3-1-31	5	8245211	8245212	1	T	core_nonrep	16	1	1
Rue3-1-31	5	8246749	8246750	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8248517	8248518	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	8249962	8249963	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	5	8254031	8254032	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8262500	8262501	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	8263823	8263824	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8266460	8266461	1	G	core_nonrep	11	1	1
Rue3-1-31	5	8271484	8271485	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8273715	8273716	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8286117	8286118	1	C	core_nonrep	9	0.75	1
Rue3-1-31	5	8288109	8288110	1	T	core_nonrep	5	1	1
Rue3-1-31	5	8294167	8294168	1	C	nonrep	3	0.75	1
Rue3-1-31	5	8300800	8300801	1	C	core_nonrep	10	1	1
Rue3-1-31	5	8302085	8302086	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	8314906	8314907	1	T	core_nonrep	10	1	1
Rue3-1-31	5	8316830	8316831	1	G	core_nonrep	4	1	1
Rue3-1-31	5	8316918	8316919	1	A	core_nonrep	6	1	1
Rue3-1-31	5	8344547	8344548	1	A	core_nonrep	7	1	1
Rue3-1-31	5	8380449	8380450	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	8405199	8405200	1	A	core_nonrep	6	1	1
Rue3-1-31	5	8406536	8406537	1	A	nonrep	3	0.75	1
Rue3-1-31	5	8408345	8408346	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8410021	8410022	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	8418886	8418887	3	AAA	core_nonrep	7	1	1
Rue3-1-31	5	8420938	8420939	1	G	core_nonrep	7	0.714286	1
Rue3-1-31	5	8436846	8436847	1	A	core_nonrep	6	1	1
Rue3-1-31	5	8448242	8448243	1	C	core_nonrep	19	0.769231	1.0303
Rue3-1-31	5	8453371	8453372	1	A	core_nonrep	4	1	1
Rue3-1-31	5	8458519	8458520	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8458851	8458852	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	8461382	8461383	2	GT	core_nonrep	7	1	1
Rue3-1-31	5	8462916	8462917	1	C	core_nonrep	10	1	1
Rue3-1-31	5	8463355	8463356	1	C	core_nonrep	9	1	1
Rue3-1-31	5	8465699	8465700	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8466144	8466145	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8466302	8466303	1	C	core_nonrep	6	1	1
Rue3-1-31	5	8472148	8472149	1	G	core_nonrep	9	0.875	1
Rue3-1-31	5	8473470	8473471	1	T	core_nonrep	11	0.833333	1
Rue3-1-31	5	8474517	8474518	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	8475704	8475705	1	A	core_nonrep	12	1	1
Rue3-1-31	5	8479318	8479319	1	A	core_nonrep	8	1	1
Rue3-1-31	5	8479322	8479323	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	5	8482505	8482506	1	G	core_nonrep	7	1	1
Rue3-1-31	5	8484264	8484265	1	G	core_nonrep	7	1	1
Rue3-1-31	5	8486896	8486897	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	8488021	8488022	1	A	core_nonrep	8	1	1
Rue3-1-31	5	8488922	8488923	1	C	core_nonrep	3	1	1
Rue3-1-31	5	8489415	8489416	2	TA	core_nonrep	6	1	1
Rue3-1-31	5	8497175	8497176	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	8502188	8502189	2	AC	core_nonrep	4	1	1
Rue3-1-31	5	8502208	8502209	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	8507343	8507344	1	A	nonrep	3	0.75	1
Rue3-1-31	5	8524859	8524860	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	8539028	8539029	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	8543641	8543642	2	TG	core_nonrep	16	0.888889	1
Rue3-1-31	5	8548986	8548987	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	8551327	8551328	2	TA	core_nonrep	8	1	1
Rue3-1-31	5	8551532	8551533	2	CA	core_nonrep	6	1	1
Rue3-1-31	5	8552071	8552072	2	AC	core_nonrep	3	1	1
Rue3-1-31	5	8557104	8557105	1	A	nonrep	3	1	1
Rue3-1-31	5	8558307	8558308	1	A	nonrep	3	0.75	1
Rue3-1-31	5	8560133	8560134	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8561413	8561414	1	A	nonrep	3	1	1
Rue3-1-31	5	8562571	8562572	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8562824	8562825	1	T	nonrep	4	1	1
Rue3-1-31	5	8563403	8563404	1	C	core_nonrep	15	1	1
Rue3-1-31	5	8565187	8565188	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	5	8571026	8571027	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	8577971	8577972	2	TA	core_nonrep	5	1	1
Rue3-1-31	5	8579598	8579599	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	8581396	8581397	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8583491	8583492	1	T	core_nonrep	5	1	1
Rue3-1-31	5	8587421	8587422	1	T	core_nonrep	20	0.95	1
Rue3-1-31	5	8587543	8587544	1	A	core_nonrep	12	1	1
Rue3-1-31	5	8588333	8588334	1	A	core_nonrep	6	1	1
Rue3-1-31	5	8590393	8590394	1	A	core_nonrep	9	1	1
Rue3-1-31	5	8591315	8591316	1	C	core_nonrep	10	1	1
Rue3-1-31	5	8594731	8594732	1	G	core_nonrep	15	0.916667	1
Rue3-1-31	5	8594840	8594841	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8597345	8597346	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8606144	8606145	2	AA	core_nonrep	10	0.909091	1
Rue3-1-31	5	8609090	8609091	1	A	core_nonrep	11	1	1
Rue3-1-31	5	8610547	8610548	2	TT	core_nonrep	11	1	1
Rue3-1-31	5	8614811	8614812	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	8617094	8617095	1	A	nonrep	6	1	1
Rue3-1-31	5	8619977	8619978	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	8620076	8620077	1	A	core_nonrep	13	0.928571	1
Rue3-1-31	5	8621735	8621736	1	G	core_nonrep	6	1	1
Rue3-1-31	5	8709181	8709182	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8709655	8709656	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8710924	8710925	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	5	8714994	8714995	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8734139	8734140	1	C	core_nonrep	5	1	1
Rue3-1-31	5	8734980	8734981	2	AA	core_nonrep	8	1	1
Rue3-1-31	5	8735650	8735651	1	A	core	3	1	1.33333
Rue3-1-31	5	8739420	8739421	1	A	core_nonrep	8	0.714286	1
Rue3-1-31	5	8747573	8747574	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8748208	8748209	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	5	8752217	8752218	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8752555	8752556	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8752626	8752627	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	8753225	8753226	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	8757619	8757620	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8769337	8769338	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	8775903	8775904	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8775906	8775907	1	C	core_nonrep	4	1	1
Rue3-1-31	5	8779863	8779864	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	8787933	8787934	1	A	core_nonrep	10	1	1
Rue3-1-31	5	8790634	8790635	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	5	8797998	8797999	2	CC	core_nonrep	5	1	1
Rue3-1-31	5	8800928	8800929	1	A	core_nonrep	11	1	1
Rue3-1-31	5	8804965	8804966	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	8807717	8807718	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8807746	8807747	1	A	core_nonrep	4	1	1
Rue3-1-31	5	8814111	8814112	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	8816866	8816867	1	C	core_nonrep	9	0.875	1
Rue3-1-31	5	8818841	8818842	1	A	core_nonrep	4	1	1
Rue3-1-31	5	8820042	8820043	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	8825094	8825095	1	G	core_nonrep	8	0.875	1
Rue3-1-31	5	8830221	8830222	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	8830412	8830413	1	T	core_nonrep	8	1	1
Rue3-1-31	5	8831147	8831148	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	8832087	8832088	1	T	core_nonrep	6	1	1
Rue3-1-31	5	8834758	8834759	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8835853	8835854	1	A	core_nonrep	8	1	1
Rue3-1-31	5	8840061	8840062	1	A	core_nonrep	4	1	1
Rue3-1-31	5	8849912	8849913	1	C	nonrep	7	0.777778	1
Rue3-1-31	5	8850668	8850669	1	A	core_nonrep	3	1	1
Rue3-1-31	5	8853030	8853031	1	C	core_nonrep	3	1	1
Rue3-1-31	5	8856890	8856891	1	T	core_nonrep	7	1	1
Rue3-1-31	5	8858158	8858159	1	T	core_nonrep	17	1	1
Rue3-1-31	5	8860550	8860551	1	A	core_nonrep	5	1	1
Rue3-1-31	5	8861353	8861354	1	T	nonrep	9	0.692308	1
Rue3-1-31	5	8874264	8874265	2	AT	core_nonrep	6	1	1
Rue3-1-31	5	8877577	8877578	2	AG	core_nonrep	3	1	1
Rue3-1-31	5	8898072	8898073	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	8913385	8913386	1	T	core_nonrep	19	1	1
Rue3-1-31	5	8913665	8913666	1	A	core_nonrep	9	0.9	1
Rue3-1-31	5	8913666	8913667	2	CT	core_nonrep	10	1	1
Rue3-1-31	5	8920039	8920040	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	8935434	8935435	1	C	core_nonrep	13	0.916667	1
Rue3-1-31	5	8939396	8939397	1	T	core_nonrep	5	1	1
Rue3-1-31	5	8940055	8940056	1	T	core_nonrep	3	1	1
Rue3-1-31	5	8944324	8944325	1	T	core_nonrep	9	1	1
Rue3-1-31	5	8945255	8945256	1	C	core_nonrep	3	1	1
Rue3-1-31	5	8945318	8945319	1	G	core_nonrep	4	1	1
Rue3-1-31	5	8946818	8946819	1	A	core_nonrep	10	0.9	1
Rue3-1-31	5	8951768	8951769	1	C	core_nonrep	8	1	1
Rue3-1-31	5	8952599	8952600	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	8990985	8990986	1	A	core_nonrep	7	1	1
Rue3-1-31	5	8994107	8994108	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	8994232	8994233	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	8994354	8994355	1	T	core_nonrep	4	1	1
Rue3-1-31	5	8997088	8997089	1	A	core_nonrep	5	1	1
Rue3-1-31	5	9000520	9000521	1	T	nonrep	3	0.75	1
Rue3-1-31	5	9000969	9000970	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	9002718	9002719	1	A	nonrep	3	1	1
Rue3-1-31	5	9011721	9011722	1	A	core_nonrep	5	1	1
Rue3-1-31	5	9013245	9013246	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	9017175	9017176	1	A	core_nonrep	22	0.952381	1
Rue3-1-31	5	9030649	9030650	2	AA	nonrep	4	1	1.2
Rue3-1-31	5	9035160	9035161	1	A	core_nonrep	7	1	1
Rue3-1-31	5	9035164	9035165	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	9037917	9037918	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	9060920	9060921	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9087756	9087757	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	9101788	9101789	1	A	core_nonrep	9	1	1
Rue3-1-31	5	9111681	9111682	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	5	9111682	9111683	2	TG	core_nonrep	11	1	1
Rue3-1-31	5	9116450	9116451	1	G	core_nonrep	5	1	1
Rue3-1-31	5	9123462	9123463	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9127396	9127397	2	TC	core_nonrep	4	1	1
Rue3-1-31	5	9133545	9133546	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9136684	9136685	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9140385	9140386	1	A	core_nonrep	3	1	1
Rue3-1-31	5	9155613	9155614	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9163946	9163947	1	T	core_nonrep	8	1	1
Rue3-1-31	5	9167269	9167270	1	C	core_nonrep	4	1	1
Rue3-1-31	5	9168534	9168535	1	A	nonrep	3	0.75	1
Rue3-1-31	5	9170301	9170302	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	9172031	9172032	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	9172196	9172197	2	TT	core_nonrep	9	1	1
Rue3-1-31	5	9172398	9172399	1	C	nonrep	3	1	1
Rue3-1-31	5	9173412	9173413	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	9173495	9173496	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9174766	9174767	3	ATT	core_nonrep	7	0.857143	1
Rue3-1-31	5	9175329	9175330	2	AT	nonrep	3	1	1
Rue3-1-31	5	9176907	9176908	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	9177233	9177234	1	A	core_nonrep	5	1	1
Rue3-1-31	5	9189937	9189938	1	A	core_nonrep	11	1	1
Rue3-1-31	5	9189956	9189957	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9191395	9191396	1	G	core_nonrep	7	1	1
Rue3-1-31	5	9191909	9191910	1	C	core_nonrep	6	1	1
Rue3-1-31	5	9192457	9192458	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9192724	9192725	1	A	core_nonrep	5	1	1
Rue3-1-31	5	9193573	9193574	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	9193603	9193604	1	T	core_nonrep	5	1	1
Rue3-1-31	5	9193833	9193834	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9196278	9196279	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9198231	9198232	1	A	core_nonrep	20	0.941176	1
Rue3-1-31	5	9199981	9199982	1	G	core_nonrep	7	1	1
Rue3-1-31	5	9200116	9200117	1	A	nonrep	3	0.75	1
Rue3-1-31	5	9203376	9203377	1	T	core_nonrep	22	0.95	1
Rue3-1-31	5	9206155	9206156	1	T	core_nonrep	3	1	1
Rue3-1-31	5	9208667	9208668	1	A	nonrep	3	0.75	1
Rue3-1-31	5	9219594	9219595	1	C	core_nonrep	6	1	1
Rue3-1-31	5	9224272	9224273	1	G	core_nonrep	6	1	1
Rue3-1-31	5	9226307	9226308	1	C	core_nonrep	6	1	1
Rue3-1-31	5	9228173	9228174	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	9230789	9230790	1	C	core_nonrep	9	0.692308	1
Rue3-1-31	5	9234727	9234728	1	G	core	8	0.7	1.05882
Rue3-1-31	5	9245796	9245797	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	9248414	9248415	3	ATT	core_nonrep	6	1	1
Rue3-1-31	5	9253033	9253034	1	C	core_nonrep	7	1	1
Rue3-1-31	5	9253034	9253035	1	A	core_nonrep	8	1	1
Rue3-1-31	5	9253588	9253589	1	C	core_nonrep	5	1	1
Rue3-1-31	5	9259628	9259629	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9260804	9260805	1	T	core_nonrep	3	1	1
Rue3-1-31	5	9268643	9268644	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	9270764	9270765	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9276166	9276167	1	T	core_nonrep	10	1	1
Rue3-1-31	5	9276402	9276403	1	T	core_nonrep	4	0.75	1.5
Rue3-1-31	5	9302774	9302775	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	9305392	9305393	1	C	core_nonrep	7	1	1
Rue3-1-31	5	9309008	9309009	2	AA	core_nonrep	14	0.866667	1
Rue3-1-31	5	9326966	9326967	1	C	core_nonrep	9	1	1
Rue3-1-31	5	9331317	9331318	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	9339398	9339399	1	C	core_nonrep	6	1	1
Rue3-1-31	5	9340462	9340463	1	A	core_nonrep	3	0.75	1.125
Rue3-1-31	5	9343762	9343763	1	A	core_nonrep	9	1	1
Rue3-1-31	5	9343765	9343766	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	5	9347513	9347514	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9360276	9360277	3	TTG	core_nonrep	10	0.909091	1
Rue3-1-31	5	9361019	9361020	1	G	core_nonrep	3	1	1
Rue3-1-31	5	9379586	9379587	1	T	core_nonrep	11	1	1
Rue3-1-31	5	9387012	9387013	1	T	nonrep	3	1	1
Rue3-1-31	5	9387950	9387951	1	A	core_nonrep	6	1	1
Rue3-1-31	5	9394937	9394938	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9409867	9409868	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9410368	9410369	1	G	core_nonrep	4	1	1
Rue3-1-31	5	9419377	9419378	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	9419831	9419832	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9420932	9420933	1	A	core_nonrep	6	1	1
Rue3-1-31	5	9421895	9421896	1	T	core_nonrep	17	0.9	1
Rue3-1-31	5	9421923	9421924	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	5	9422683	9422684	1	G	core_nonrep	3	1	1
Rue3-1-31	5	9423439	9423440	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	9423976	9423977	1	A	core_nonrep	3	1	1
Rue3-1-31	5	9424582	9424583	1	G	core_nonrep	6	1	1
Rue3-1-31	5	9425620	9425621	1	G	core_nonrep	7	1	1
Rue3-1-31	5	9433366	9433367	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	9435790	9435791	1	T	core_nonrep	9	1	1
Rue3-1-31	5	9435791	9435792	1	A	core_nonrep	10	1	1
Rue3-1-31	5	9437582	9437583	1	A	core_nonrep	19	1	1
Rue3-1-31	5	9437601	9437602	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	9437684	9437685	1	C	core_nonrep	15	1	1
Rue3-1-31	5	9445449	9445450	1	C	core_nonrep	3	1	1
Rue3-1-31	5	9446358	9446359	1	G	core_nonrep	6	1	1
Rue3-1-31	5	9447426	9447427	1	T	core_nonrep	5	1	1
Rue3-1-31	5	9450670	9450671	1	T	core_nonrep	3	1	1
Rue3-1-31	5	9453143	9453144	1	T	core_nonrep	13	1	1
Rue3-1-31	5	9453352	9453353	1	G	core_nonrep	9	1	1
Rue3-1-31	5	9453353	9453354	1	T	core_nonrep	11	1	1
Rue3-1-31	5	9456850	9456851	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	9465648	9465649	1	T	core_nonrep	11	1	1
Rue3-1-31	5	9469267	9469268	1	G	core_nonrep	4	1	1
Rue3-1-31	5	9470359	9470360	1	G	core_nonrep	4	0.75	1
Rue3-1-31	5	9472918	9472919	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9473527	9473528	1	A	core_nonrep	5	1	1
Rue3-1-31	5	9473589	9473590	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	9473957	9473958	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9487547	9487548	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	9488611	9488612	1	A	core_nonrep	6	1	1
Rue3-1-31	5	9492828	9492829	1	T	core_nonrep	9	1	1
Rue3-1-31	5	9502490	9502491	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	9507923	9507924	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9509514	9509515	1	T	core_nonrep	8	1	1
Rue3-1-31	5	9509515	9509516	1	C	core_nonrep	8	1	1
Rue3-1-31	5	9515603	9515604	1	A	core_nonrep	17	1	1
Rue3-1-31	5	9516848	9516849	2	CC	core_nonrep	4	1	1
Rue3-1-31	5	9522406	9522407	1	A	core_nonrep	5	0.75	1.18182
Rue3-1-31	5	9525681	9525682	1	G	core_nonrep	12	1	1
Rue3-1-31	5	9532944	9532945	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9540750	9540751	1	T	core_nonrep	5	1	1
Rue3-1-31	5	9544485	9544486	1	G	core_nonrep	7	1	1
Rue3-1-31	5	9548644	9548645	1	T	nonrep	4	0.8	1
Rue3-1-31	5	9548645	9548646	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9548914	9548915	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	9549170	9549171	1	T	core_nonrep	9	1	1
Rue3-1-31	5	9549230	9549231	1	C	core_nonrep	10	1	1
Rue3-1-31	5	9550091	9550092	1	T	core_nonrep	11	0.916667	1
Rue3-1-31	5	9553005	9553006	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9553091	9553092	1	T	core_nonrep	5	1	1
Rue3-1-31	5	9553588	9553589	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	9553897	9553898	1	C	core_nonrep	5	1	1
Rue3-1-31	5	9575736	9575737	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9576272	9576273	1	A	core_nonrep	3	1	1
Rue3-1-31	5	9576276	9576277	1	A	core_nonrep	3	1	1
Rue3-1-31	5	9577031	9577032	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	9588173	9588174	1	T	core_nonrep	3	1	1
Rue3-1-31	5	9589553	9589554	1	T	core_nonrep	5	1	1
Rue3-1-31	5	9595568	9595569	1	C	nonrep	3	0.75	1
Rue3-1-31	5	9596877	9596878	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	9616530	9616531	1	T	core_nonrep	4	0.8	1.28571
Rue3-1-31	5	9616728	9616729	1	T	nonrep	3	0.75	1
Rue3-1-31	5	9617369	9617370	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	9703741	9703742	1	A	core_nonrep	13	0.857143	1
Rue3-1-31	5	9918691	9918692	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9918938	9918939	1	A	core_nonrep	3	1	1
Rue3-1-31	5	9919100	9919101	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9919308	9919309	1	G	core_nonrep	13	0.769231	1.07143
Rue3-1-31	5	9919309	9919310	1	C	core_nonrep	13	1	1.07143
Rue3-1-31	5	9919971	9919972	1	T	core_nonrep	7	1	1
Rue3-1-31	5	9934121	9934122	2	TT	core_nonrep	4	0.8	1
Rue3-1-31	5	9936277	9936278	1	A	core_nonrep	6	1	1
Rue3-1-31	5	9941619	9941620	1	G	core_nonrep	4	1	1
Rue3-1-31	5	9943879	9943880	1	T	core_nonrep	4	1	1
Rue3-1-31	5	9944996	9944997	1	T	core_nonrep	8	1	1
Rue3-1-31	5	9946854	9946855	1	T	core_nonrep	8	0.833333	1
Rue3-1-31	5	9948887	9948888	1	T	core_nonrep	10	0.727273	1
Rue3-1-31	5	9955676	9955677	1	T	core_nonrep	3	1	1
Rue3-1-31	5	9956820	9956821	1	C	core_nonrep	5	1	1
Rue3-1-31	5	9956913	9956914	1	G	core_nonrep	5	1	1
Rue3-1-31	5	9956988	9956989	1	C	core_nonrep	7	0.875	1
Rue3-1-31	5	9959851	9959852	2	AT	core_nonrep	10	1	1
Rue3-1-31	5	9965899	9965900	1	A	core_nonrep	8	1	1
Rue3-1-31	5	9965966	9965967	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	9972442	9972443	1	T	core_nonrep	11	1	1
Rue3-1-31	5	9973546	9973547	1	A	nonrep	3	1	1
Rue3-1-31	5	9975765	9975766	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	9984950	9984951	1	T	core_nonrep	6	1	1
Rue3-1-31	5	9993381	9993382	1	A	core_nonrep	4	1	1
Rue3-1-31	5	9997863	9997864	1	C	core_nonrep	15	0.866667	1
Rue3-1-31	5	10001121	10001122	1	T	core_nonrep	13	0.818182	1
Rue3-1-31	5	10008885	10008886	1	A	core_nonrep	10	0.8	1
Rue3-1-31	5	10012974	10012975	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10016679	10016680	1	T	core_nonrep	7	1	1
Rue3-1-31	5	10017980	10017981	2	CT	core_nonrep	10	1	1
Rue3-1-31	5	10020219	10020220	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10020942	10020943	1	C	core_nonrep	4	1	1
Rue3-1-31	5	10021269	10021270	1	T	core_nonrep	10	1	1
Rue3-1-31	5	10023653	10023654	1	T	core_nonrep	6	1	1
Rue3-1-31	5	10024624	10024625	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10024761	10024762	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10024798	10024799	2	AC	core_nonrep	4	1	1
Rue3-1-31	5	10029144	10029145	1	A	nonrep	3	0.75	1
Rue3-1-31	5	10032373	10032374	1	G	nonrep	3	0.75	1
Rue3-1-31	5	10039998	10039999	1	C	nonrep	4	0.8	1
Rue3-1-31	5	10045120	10045121	1	C	core_nonrep	11	1	1
Rue3-1-31	5	10045293	10045294	1	A	core_nonrep	13	0.875	1
Rue3-1-31	5	10059338	10059339	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	10063111	10063112	1	C	core_nonrep	14	0.923077	1
Rue3-1-31	5	10064411	10064412	1	A	core_nonrep	23	0.9	1
Rue3-1-31	5	10066534	10066535	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10068302	10068303	1	G	core_nonrep	3	1	1
Rue3-1-31	5	10069417	10069418	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	10069467	10069468	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10069870	10069871	1	A	core_nonrep	6	1	1
Rue3-1-31	5	10074016	10074017	1	A	core_nonrep	7	1	1
Rue3-1-31	5	10084124	10084125	1	C	core_nonrep	5	1	1
Rue3-1-31	5	10085093	10085094	1	G	core_nonrep	5	1	1
Rue3-1-31	5	10086757	10086758	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	5	10089752	10089753	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	10100273	10100274	1	G	core_nonrep	9	0.8	1
Rue3-1-31	5	10100875	10100876	1	T	nonrep	4	0.8	1
Rue3-1-31	5	10106756	10106757	1	A	core_nonrep	14	0.846154	1
Rue3-1-31	5	10119745	10119746	1	G	core_nonrep	3	1	1
Rue3-1-31	5	10119804	10119805	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10128606	10128607	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	10128805	10128806	1	G	core_nonrep	5	1	1.16667
Rue3-1-31	5	10129107	10129108	1	A	core_nonrep	11	1	1
Rue3-1-31	5	10134474	10134475	2	CA	core_nonrep	8	1	1
Rue3-1-31	5	10175626	10175627	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10186910	10186911	1	N	core_nonrep	5	1	1
Rue3-1-31	5	10188358	10188359	1	A	core_nonrep	5	1	1
Rue3-1-31	5	10193187	10193188	1	G	core_nonrep	6	1	1
Rue3-1-31	5	10194916	10194917	1	G	nonrep	3	1	1
Rue3-1-31	5	10195179	10195180	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	10206597	10206598	1	G	core_nonrep	4	1	1
Rue3-1-31	5	10208890	10208891	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10217924	10217925	1	G	core_nonrep	4	1	1
Rue3-1-31	5	10232000	10232001	1	T	nonrep	7	0.875	1
Rue3-1-31	5	10236497	10236498	1	G	core_nonrep	4	1	1
Rue3-1-31	5	10238515	10238516	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10238516	10238517	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10240267	10240268	1	A	core_nonrep	6	1	1.58333
Rue3-1-31	5	10240492	10240493	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	10267396	10267397	1	A	core_nonrep	6	1	1
Rue3-1-31	5	10272918	10272919	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	10276430	10276431	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	10276860	10276861	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10281142	10281143	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	10282564	10282565	1	T	core_nonrep	6	1	1
Rue3-1-31	5	10282567	10282568	1	T	core_nonrep	6	1	1
Rue3-1-31	5	10283528	10283529	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	10301969	10301970	1	A	core_nonrep	19	1	1.78261
Rue3-1-31	5	10319245	10319246	1	T	core_nonrep	14	0.933333	1.44
Rue3-1-31	5	10367741	10367742	1	A	core_nonrep	10	1	1.69231
Rue3-1-31	5	10368097	10368098	1	C	core_nonrep	19	0.8125	1
Rue3-1-31	5	10384836	10384837	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10390401	10390402	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10396253	10396254	1	A	nonrep	3	1	1
Rue3-1-31	5	10396254	10396255	1	G	nonrep	3	1	1
Rue3-1-31	5	10398788	10398789	1	G	core_nonrep	9	1	1
Rue3-1-31	5	10400173	10400174	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10407658	10407659	1	A	core_nonrep	14	0.846154	1
Rue3-1-31	5	10408272	10408273	1	A	core_nonrep	7	1	1
Rue3-1-31	5	10408320	10408321	1	T	nonrep	7	0.7	1
Rue3-1-31	5	10409932	10409933	1	G	core_nonrep	8	1	1
Rue3-1-31	5	10410413	10410414	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	10410671	10410672	1	T	core_nonrep	12	1	1
Rue3-1-31	5	10412513	10412514	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	10413488	10413489	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	10422119	10422120	2	AC	core_nonrep	3	1	1
Rue3-1-31	5	10422696	10422697	1	G	core_nonrep	5	1	1
Rue3-1-31	5	10422953	10422954	1	T	core_nonrep	11	0.846154	1
Rue3-1-31	5	10426619	10426620	1	A	core_nonrep	6	1	1
Rue3-1-31	5	10428663	10428664	1	T	nonrep	4	1	1
Rue3-1-31	5	10452335	10452336	1	C	core_nonrep	5	1	1
Rue3-1-31	5	10456535	10456536	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	10456617	10456618	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10468169	10468170	1	T	core_nonrep	6	1	1
Rue3-1-31	5	10470516	10470517	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	5	10472323	10472324	1	C	core_nonrep	11	0.818182	1
Rue3-1-31	5	10475920	10475921	1	T	core_nonrep	5	1	1
Rue3-1-31	5	10479266	10479267	1	T	core_nonrep	5	1	1
Rue3-1-31	5	10479385	10479386	1	T	nonrep	3	1	1
Rue3-1-31	5	10480476	10480477	1	C	core_nonrep	8	1	1
Rue3-1-31	5	10481281	10481282	1	T	core_nonrep	11	1	1
Rue3-1-31	5	10484671	10484672	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10492018	10492019	1	G	core_nonrep	9	1	1
Rue3-1-31	5	10506574	10506575	1	A	nonrep	3	0.75	1
Rue3-1-31	5	10509941	10509942	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10512179	10512180	1	T	core_nonrep	15	0.875	1
Rue3-1-31	5	10514552	10514553	1	G	nonrep	6	0.75	1
Rue3-1-31	5	10531351	10531352	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	10542768	10542769	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	10566263	10566264	1	A	core_nonrep	7	1	1.57143
Rue3-1-31	5	10578434	10578435	1	T	core_nonrep	10	1	1
Rue3-1-31	5	10578484	10578485	1	G	core_nonrep	12	1	1
Rue3-1-31	5	10580585	10580586	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10585149	10585150	1	C	core_nonrep	13	0.909091	1
Rue3-1-31	5	10588880	10588881	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10599128	10599129	1	A	core_nonrep	15	0.916667	1
Rue3-1-31	5	10600219	10600220	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	10602303	10602304	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	10607204	10607205	1	C	core_nonrep	10	1	1
Rue3-1-31	5	10615970	10615971	1	G	core_nonrep	4	1	1
Rue3-1-31	5	10623016	10623017	2	TT	core_nonrep	10	0.8	1.27778
Rue3-1-31	5	10625037	10625038	1	T	core_nonrep	10	1	1.06667
Rue3-1-31	5	10625038	10625039	1	G	core_nonrep	10	1	1.07692
Rue3-1-31	5	10626393	10626394	1	T	core_nonrep	5	1	1
Rue3-1-31	5	10631940	10631941	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	10640027	10640028	1	A	core_nonrep	15	0.928571	1
Rue3-1-31	5	10650514	10650515	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10670639	10670640	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10673369	10673370	1	T	core_nonrep	5	1	1
Rue3-1-31	5	10673911	10673912	1	C	core_nonrep	6	1	1
Rue3-1-31	5	10673986	10673987	1	A	core_nonrep	7	1	1
Rue3-1-31	5	10674554	10674555	2	TG	core_nonrep	5	1	1
Rue3-1-31	5	10674859	10674860	1	A	core_nonrep	11	1	1
Rue3-1-31	5	10684053	10684054	1	G	core_nonrep	7	0.875	1
Rue3-1-31	5	10684467	10684468	1	A	core_nonrep	5	1	1
Rue3-1-31	5	10686645	10686646	1	T	core_nonrep	14	1	1
Rue3-1-31	5	10686702	10686703	1	T	core_nonrep	7	1	1
Rue3-1-31	5	10688656	10688657	1	T	nonrep	3	1	1
Rue3-1-31	5	10691510	10691511	1	A	nonrep	3	1	1
Rue3-1-31	5	10694249	10694250	1	T	core_nonrep	6	0.75	1.66667
Rue3-1-31	5	10699928	10699929	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10702147	10702148	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	10703003	10703004	1	G	core_nonrep	6	1	1
Rue3-1-31	5	10703776	10703777	1	T	core_nonrep	7	1	1
Rue3-1-31	5	10724085	10724086	2	TA	core_nonrep	6	0.75	1
Rue3-1-31	5	10724086	10724087	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	10724481	10724482	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	10731779	10731780	1	T	core_nonrep	12	0.733333	1.43478
Rue3-1-31	5	10741439	10741440	1	C	core_nonrep	6	1	1
Rue3-1-31	5	10745683	10745684	1	T	nonrep	3	0.75	1
Rue3-1-31	5	10785049	10785050	1	T	core_nonrep	9	1	1
Rue3-1-31	5	10794388	10794389	1	A	core_nonrep	9	1	1
Rue3-1-31	5	10794675	10794676	1	T	nonrep	4	1	1
Rue3-1-31	5	10796989	10796990	1	A	core_nonrep	10	1	1
Rue3-1-31	5	10798211	10798212	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10801099	10801100	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10801271	10801272	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	10804367	10804368	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10807560	10807561	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	10809340	10809341	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	10830652	10830653	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	10831783	10831784	1	A	core_nonrep	10	0.875	1
Rue3-1-31	5	10833588	10833589	1	T	core_nonrep	4	1	1
Rue3-1-31	5	10840054	10840055	1	T	core_nonrep	5	1	1
Rue3-1-31	5	10876137	10876138	2	TG	nonrep	3	0.75	1
Rue3-1-31	5	10877175	10877176	1	T	core_nonrep	9	1	1
Rue3-1-31	5	10877524	10877525	1	G	core_nonrep	12	1	1
Rue3-1-31	5	10887065	10887066	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	5	10889403	10889404	1	C	core_nonrep	12	1	1
Rue3-1-31	5	10900579	10900580	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10903261	10903262	1	A	core_nonrep	8	1	1
Rue3-1-31	5	10904099	10904100	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	10915146	10915147	1	A	core_nonrep	8	1	1
Rue3-1-31	5	10917718	10917719	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	10918366	10918367	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	10918899	10918900	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	10921292	10921293	1	A	core_nonrep	4	1	1
Rue3-1-31	5	10928167	10928168	1	G	core_nonrep	3	1	1
Rue3-1-31	5	10936514	10936515	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	10944404	10944405	1	A	core_nonrep	3	1	1
Rue3-1-31	5	10954301	10954302	1	G	core_nonrep	4	1	1
Rue3-1-31	5	10965590	10965591	1	A	core_nonrep	16	1	1
Rue3-1-31	5	10967629	10967630	1	T	core_nonrep	13	1	1
Rue3-1-31	5	10970125	10970126	1	T	core_nonrep	30	0.965517	1
Rue3-1-31	5	10977287	10977288	2	CT	core_nonrep	10	1	1
Rue3-1-31	5	10985487	10985488	1	T	core_nonrep	16	1	1
Rue3-1-31	5	10989284	10989285	1	T	core_nonrep	3	1	1
Rue3-1-31	5	10991007	10991008	1	A	core_nonrep	11	1	1
Rue3-1-31	5	10992000	10992001	1	T	core_nonrep	5	1	1
Rue3-1-31	5	11011763	11011764	1	A	core_nonrep	10	1	1
Rue3-1-31	5	11017504	11017505	1	G	core_nonrep	5	1	1
Rue3-1-31	5	11019142	11019143	1	G	core_nonrep	8	1	1
Rue3-1-31	5	11033868	11033869	1	T	core_nonrep	5	1	1
Rue3-1-31	5	11038721	11038722	2	GT	core_nonrep	12	1	1
Rue3-1-31	5	11090912	11090913	1	G	core_nonrep	3	0.75	1.8
Rue3-1-31	5	11095333	11095334	1	G	core_nonrep	9	1	1
Rue3-1-31	5	11110498	11110499	1	G	core_nonrep	6	1	1
Rue3-1-31	5	11114059	11114060	1	A	core_nonrep	4	1	1
Rue3-1-31	5	11114472	11114473	1	T	core_nonrep	9	1	1
Rue3-1-31	5	11124095	11124096	1	A	core_nonrep	8	1	1.5
Rue3-1-31	5	11171352	11171353	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	11172145	11172146	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	11242231	11242232	1	T	core_nonrep	6	1	1
Rue3-1-31	5	11285436	11285437	1	T	core_nonrep	8	1	1
Rue3-1-31	5	11305783	11305784	2	AG	core_nonrep	7	1	1
Rue3-1-31	5	11326393	11326394	2	AG	core_nonrep	10	1	1
Rue3-1-31	5	11328478	11328479	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	11329623	11329624	2	AT	core_nonrep	13	0.733333	1.73684
Rue3-1-31	5	11329943	11329944	1	T	core_nonrep	4	1	1.125
Rue3-1-31	5	11352835	11352836	1	A	core_nonrep	17	0.842105	1
Rue3-1-31	5	11353131	11353132	1	T	core_nonrep	13	1	1
Rue3-1-31	5	11353132	11353133	1	C	core_nonrep	13	0.818182	1
Rue3-1-31	5	11353133	11353134	1	C	core_nonrep	13	0.846154	1
Rue3-1-31	5	11357609	11357610	1	T	core_nonrep	17	0.857143	1.76923
Rue3-1-31	5	11392661	11392662	1	A	core_nonrep	5	1	1
Rue3-1-31	5	11394784	11394785	1	A	core_nonrep	14	1	1
Rue3-1-31	5	11408240	11408241	1	T	core_nonrep	6	1	1
Rue3-1-31	5	11413128	11413129	1	A	core_nonrep	8	0.888889	1.58333
Rue3-1-31	5	11423181	11423182	1	G	core_nonrep	18	1	1.4
Rue3-1-31	5	11429844	11429845	1	C	core_nonrep	3	1	1
Rue3-1-31	5	11432579	11432580	1	A	core_nonrep	15	1	1.15
Rue3-1-31	5	11434835	11434836	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	11444015	11444016	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	11446102	11446103	1	A	core_nonrep	13	1	1
Rue3-1-31	5	11454444	11454445	1	A	core_nonrep	11	1	1
Rue3-1-31	5	11454556	11454557	1	G	core_nonrep	7	0.833333	1.125
Rue3-1-31	5	11461384	11461385	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	11466219	11466220	1	A	core_nonrep	14	0.875	1
Rue3-1-31	5	11468946	11468947	1	C	nonrep	4	1	1
Rue3-1-31	5	11470192	11470193	1	A	core_nonrep	6	1	1
Rue3-1-31	5	11472096	11472097	1	G	core_nonrep	10	1	1.07143
Rue3-1-31	5	11472957	11472958	1	G	core_nonrep	6	1	1
Rue3-1-31	5	11488593	11488594	1	C	core_nonrep	7	1	1
Rue3-1-31	5	11501529	11501530	2	AG	nonrep	3	1	1
Rue3-1-31	5	11517306	11517307	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	11547007	11547008	1	T	core_nonrep	4	0.8	1.125
Rue3-1-31	5	11553496	11553497	1	C	core_nonrep	3	1	1.4
Rue3-1-31	5	11553623	11553624	1	T	core_nonrep	15	1	1.28571
Rue3-1-31	5	11567422	11567423	1	A	core_nonrep	3	1	1
Rue3-1-31	5	11568471	11568472	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	11568476	11568477	1	G	core_nonrep	6	1	1
Rue3-1-31	5	11575911	11575912	1	G	core_nonrep	5	1	1
Rue3-1-31	5	11578757	11578758	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	11586568	11586569	1	G	core_nonrep	6	1	1
Rue3-1-31	5	11589299	11589300	1	G	core_nonrep	12	0.818182	1
Rue3-1-31	5	11626447	11626448	1	A	core_nonrep	9	1	1.375
Rue3-1-31	5	11635702	11635703	1	A	core_nonrep	8	1	1
Rue3-1-31	5	11636296	11636297	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	11639390	11639391	1	A	core_nonrep	17	1	1
Rue3-1-31	5	11652754	11652755	1	T	core_nonrep	6	1	1
Rue3-1-31	5	11655561	11655562	1	T	core_nonrep	3	1	1
Rue3-1-31	5	11659048	11659049	1	A	core_nonrep	33	0.892857	1
Rue3-1-31	5	11666086	11666087	1	A	core_nonrep	10	0.8	1
Rue3-1-31	5	11684166	11684167	2	CG	core_nonrep	16	0.736842	1.26087
Rue3-1-31	5	11717899	11717900	1	A	nonrep	3	0.75	1
Rue3-1-31	5	11815148	11815149	1	A	core	3	1	1.2
Rue3-1-31	5	11839623	11839624	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	5	11989423	11989424	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	12020616	12020617	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	12039859	12039860	1	C	core_nonrep	14	0.857143	1
Rue3-1-31	5	12042445	12042446	1	G	core_nonrep	7	1	1
Rue3-1-31	5	12084280	12084281	1	C	core_nonrep	7	1	1
Rue3-1-31	5	12088837	12088838	1	T	core_nonrep	8	1	1
Rue3-1-31	5	12094080	12094081	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	12098885	12098886	1	T	core_nonrep	10	1	1
Rue3-1-31	5	12193397	12193398	1	A	nonrep	4	0.8	1.33333
Rue3-1-31	5	12194848	12194849	1	A	core_nonrep	5	0.8	1.07692
Rue3-1-31	5	12195527	12195528	1	G	core_nonrep	12	1	1
Rue3-1-31	5	12205510	12205511	1	C	core_nonrep	4	1	1.2
Rue3-1-31	5	12213596	12213597	1	G	core_nonrep	10	0.9	1
Rue3-1-31	5	12213898	12213899	1	C	core_nonrep	16	0.866667	1
Rue3-1-31	5	12237067	12237068	1	A	core_nonrep	5	1	1.57143
Rue3-1-31	5	12238013	12238014	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	12243067	12243068	1	A	core_nonrep	8	0.8	1
Rue3-1-31	5	12253453	12253454	1	T	core_nonrep	4	1	1
Rue3-1-31	5	12256077	12256078	1	T	core_nonrep	3	1	1.85714
Rue3-1-31	5	12266916	12266917	1	C	core_nonrep	8	1	1
Rue3-1-31	5	12268143	12268144	1	G	core_nonrep	4	1	1
Rue3-1-31	5	12268714	12268715	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	5	12272672	12272673	1	T	core_nonrep	17	1	1
Rue3-1-31	5	12279883	12279884	1	G	core_nonrep	5	0.75	1
Rue3-1-31	5	12283965	12283966	1	G	core_nonrep	14	1	1
Rue3-1-31	5	12284446	12284447	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	12284935	12284936	1	C	core_nonrep	14	1	1
Rue3-1-31	5	12303184	12303185	1	G	core_nonrep	9	1	1
Rue3-1-31	5	12304712	12304713	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12305674	12305675	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	5	12309678	12309679	1	G	core_nonrep	6	1	1
Rue3-1-31	5	12317983	12317984	1	A	core_nonrep	13	1	1.75
Rue3-1-31	5	12318973	12318974	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	12320140	12320141	1	A	core_nonrep	7	1	1
Rue3-1-31	5	12320728	12320729	1	C	core_nonrep	4	1	1.2
Rue3-1-31	5	12322914	12322915	1	T	core_nonrep	4	1	1
Rue3-1-31	5	12324956	12324957	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	12327232	12327233	1	G	core_nonrep	12	1	1
Rue3-1-31	5	12329610	12329611	1	C	core_nonrep	3	1	1
Rue3-1-31	5	12330222	12330223	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	12330449	12330450	1	T	core_nonrep	9	1	1
Rue3-1-31	5	12330505	12330506	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	12340714	12340715	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12341768	12341769	1	T	core_nonrep	13	1	1
Rue3-1-31	5	12349659	12349660	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	12352233	12352234	2	AG	core_nonrep	20	0.944444	1
Rue3-1-31	5	12379998	12379999	1	A	core_nonrep	11	1	1
Rue3-1-31	5	12382473	12382474	1	G	core_nonrep	5	1	1
Rue3-1-31	5	12393391	12393392	1	G	core_nonrep	12	0.8	1
Rue3-1-31	5	12393763	12393764	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12395367	12395368	1	T	core_nonrep	11	1	1
Rue3-1-31	5	12398146	12398147	1	G	core_nonrep	10	1	1
Rue3-1-31	5	12398173	12398174	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	5	12406858	12406859	1	C	core_nonrep	14	1	1.05882
Rue3-1-31	5	12406889	12406890	1	A	core_nonrep	13	0.909091	1.06667
Rue3-1-31	5	12438316	12438317	1	A	core_nonrep	3	1	1
Rue3-1-31	5	12444356	12444357	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	12457245	12457246	2	AA	core_nonrep	7	0.75	1
Rue3-1-31	5	12461760	12461761	1	T	core_nonrep	16	1	1
Rue3-1-31	5	12462604	12462605	1	T	core_nonrep	7	1	1
Rue3-1-31	5	12510636	12510637	1	C	core	5	1	1.3
Rue3-1-31	5	12513501	12513502	1	C	core_nonrep	8	1	1
Rue3-1-31	5	12515178	12515179	1	T	core_nonrep	6	1	1
Rue3-1-31	5	12526849	12526850	1	G	nonrep	3	0.75	1
Rue3-1-31	5	12528086	12528087	1	T	core_nonrep	7	1	1
Rue3-1-31	5	12546418	12546419	1	T	core_nonrep	6	1	1
Rue3-1-31	5	12548775	12548776	1	A	core_nonrep	19	1	1
Rue3-1-31	5	12555564	12555565	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12566275	12566276	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12570776	12570777	1	T	core_nonrep	4	1	1
Rue3-1-31	5	12570888	12570889	1	C	core_nonrep	4	1	1
Rue3-1-31	5	12570889	12570890	1	A	core_nonrep	4	1	1
Rue3-1-31	5	12571506	12571507	1	C	nonrep	3	0.75	1
Rue3-1-31	5	12573140	12573141	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	12573482	12573483	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	12577205	12577206	1	A	core_nonrep	6	1	1
Rue3-1-31	5	12579650	12579651	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	12591815	12591816	1	G	core_nonrep	14	1	1
Rue3-1-31	5	12597418	12597419	1	C	core_nonrep	12	1	1
Rue3-1-31	5	12609411	12609412	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	12613378	12613379	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	12619486	12619487	1	A	nonrep	7	0.7	1
Rue3-1-31	5	12624434	12624435	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	5	12722341	12722342	1	T	core_nonrep	8	1	1.5
Rue3-1-31	5	12731850	12731851	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	12753662	12753663	1	A	nonrep	3	1	1
Rue3-1-31	5	12755478	12755479	1	T	core_nonrep	4	1	1
Rue3-1-31	5	12758215	12758216	1	T	core_nonrep	3	1	1.33333
Rue3-1-31	5	12906514	12906515	1	G	core_nonrep	3	1	1
Rue3-1-31	5	12909516	12909517	1	T	nonrep	3	1	1
Rue3-1-31	5	12909517	12909518	1	A	nonrep	3	1	1
Rue3-1-31	5	12909836	12909837	1	A	core_nonrep	4	1	1.3
Rue3-1-31	5	13019733	13019734	1	G	core_nonrep	3	1	1.75
Rue3-1-31	5	13059766	13059767	1	T	core_nonrep	19	1	1.24
Rue3-1-31	5	13068271	13068272	1	C	core_nonrep	4	1	1
Rue3-1-31	5	13070774	13070775	1	C	core_nonrep	4	1	1
Rue3-1-31	5	13071988	13071989	1	G	core_nonrep	13	0.764706	1
Rue3-1-31	5	13072585	13072586	1	A	nonrep	3	1	1
Rue3-1-31	5	13076114	13076115	1	G	nonrep	3	1	1
Rue3-1-31	5	13079069	13079070	1	G	core_nonrep	7	1	1
Rue3-1-31	5	13092272	13092273	1	C	core_nonrep	9	1	1
Rue3-1-31	5	13092607	13092608	1	A	nonrep	3	1	1
Rue3-1-31	5	13097431	13097432	1	G	core_nonrep	4	0.75	1
Rue3-1-31	5	13097923	13097924	1	A	core_nonrep	6	1	1
Rue3-1-31	5	13098154	13098155	1	T	core_nonrep	3	1	1
Rue3-1-31	5	13105246	13105247	1	G	core_nonrep	23	1	1
Rue3-1-31	5	13108157	13108158	2	GC	core_nonrep	14	0.6875	1.38462
Rue3-1-31	5	13111175	13111176	1	A	core_nonrep	4	1	1
Rue3-1-31	5	13115612	13115613	1	C	core_nonrep	10	1	1
Rue3-1-31	5	13128014	13128015	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	5	13136629	13136630	1	C	core_nonrep	10	1	1
Rue3-1-31	5	13137452	13137453	1	A	core_nonrep	12	0.8	1
Rue3-1-31	5	13150008	13150009	1	A	core_nonrep	8	1	1
Rue3-1-31	5	13154229	13154230	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	13155280	13155281	2	GA	core_nonrep	5	0.8	1.125
Rue3-1-31	5	13172677	13172678	1	A	core_nonrep	6	1	1
Rue3-1-31	5	13173171	13173172	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	13176479	13176480	1	A	core_nonrep	9	1	1.1
Rue3-1-31	5	13179309	13179310	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	13179659	13179660	1	A	core_nonrep	12	0.909091	1
Rue3-1-31	5	13184813	13184814	1	C	core_nonrep	19	0.941176	1
Rue3-1-31	5	13186329	13186330	1	A	core_nonrep	14	1	1
Rue3-1-31	5	13241168	13241169	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	13245476	13245477	1	A	core_nonrep	5	1	1
Rue3-1-31	5	13248700	13248701	1	A	nonrep	4	0.8	1
Rue3-1-31	5	13249806	13249807	1	T	core_nonrep	8	1	1
Rue3-1-31	5	13252944	13252945	1	T	core_nonrep	7	1	1
Rue3-1-31	5	13307598	13307599	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	13316854	13316855	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	13343762	13343763	2	TT	core_nonrep	10	1	1
Rue3-1-31	5	13347544	13347545	1	T	core_nonrep	7	1	1.09091
Rue3-1-31	5	13352911	13352912	1	T	core_nonrep	13	1	1
Rue3-1-31	5	13371252	13371253	1	A	core_nonrep	6	1	1
Rue3-1-31	5	13383458	13383459	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	13390081	13390082	1	C	core_nonrep	8	1	1
Rue3-1-31	5	13400450	13400451	1	T	core_nonrep	6	1	1
Rue3-1-31	5	13401672	13401673	1	A	core_nonrep	7	1	1
Rue3-1-31	5	13401928	13401929	1	T	core_nonrep	12	1	1
Rue3-1-31	5	13403012	13403013	1	T	core_nonrep	16	0.6875	1
Rue3-1-31	5	13403234	13403235	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	5	13406592	13406593	1	G	core_nonrep	9	1	1
Rue3-1-31	5	13412207	13412208	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	13417365	13417366	1	A	core_nonrep	11	0.692308	1.11765
Rue3-1-31	5	13430510	13430511	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	13435699	13435700	1	T	nonrep	3	0.75	1
Rue3-1-31	5	13441637	13441638	1	C	core_nonrep	10	1	1
Rue3-1-31	5	13485771	13485772	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	5	13487505	13487506	1	A	core_nonrep	8	0.75	1
Rue3-1-31	5	13487506	13487507	1	T	core_nonrep	8	0.75	1
Rue3-1-31	5	13490987	13490988	1	A	core_nonrep	4	1	1
Rue3-1-31	5	13506930	13506931	1	T	core_nonrep	13	1	1
Rue3-1-31	5	13511239	13511240	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	13511430	13511431	1	A	core_nonrep	7	0.75	1
Rue3-1-31	5	13517141	13517142	1	A	core_nonrep	4	1	1
Rue3-1-31	5	13524327	13524328	1	A	core	5	0.714286	1.125
Rue3-1-31	5	13535057	13535058	1	A	core_nonrep	7	1	1
Rue3-1-31	5	13539070	13539071	1	T	core_nonrep	6	1	1
Rue3-1-31	5	13539121	13539122	1	A	core_nonrep	10	1	1
Rue3-1-31	5	13547105	13547106	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	5	13549554	13549555	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	13562462	13562463	1	G	core_nonrep	7	0.75	1
Rue3-1-31	5	13570249	13570250	1	G	nonrep	5	0.833333	1
Rue3-1-31	5	13588960	13588961	1	C	core_nonrep	11	1	1
Rue3-1-31	5	13598935	13598936	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	13612207	13612208	1	A	core_nonrep	16	1	1
Rue3-1-31	5	13612675	13612676	1	A	core_nonrep	10	1	1
Rue3-1-31	5	13617045	13617046	1	A	core_nonrep	5	0.714286	1
Rue3-1-31	5	13626456	13626457	1	T	core_nonrep	5	1	1.25
Rue3-1-31	5	13633575	13633576	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	5	13648138	13648139	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	13648782	13648783	1	T	nonrep	3	1	1
Rue3-1-31	5	13649230	13649231	1	A	core_nonrep	5	1	1
Rue3-1-31	5	13655560	13655561	2	CT	core_nonrep	10	0.9	1
Rue3-1-31	5	13665076	13665077	1	C	core_nonrep	10	1	1
Rue3-1-31	5	13666219	13666220	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	5	13668352	13668353	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	13688325	13688326	1	G	core_nonrep	13	0.909091	1
Rue3-1-31	5	13720217	13720218	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	13793103	13793104	1	T	core_nonrep	3	1	1
Rue3-1-31	5	13806615	13806616	1	C	core_nonrep	11	1	1
Rue3-1-31	5	13815965	13815966	2	TC	core_nonrep	8	1	1
Rue3-1-31	5	13822055	13822056	1	A	core_nonrep	3	1	1
Rue3-1-31	5	13823316	13823317	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	13825220	13825221	1	A	core_nonrep	8	1	1
Rue3-1-31	5	13828650	13828651	1	T	core_nonrep	9	1	1
Rue3-1-31	5	13832214	13832215	1	C	core_nonrep	3	1	1
Rue3-1-31	5	13835626	13835627	1	T	core_nonrep	3	1	1
Rue3-1-31	5	13839709	13839710	1	T	core_nonrep	8	1	1
Rue3-1-31	5	13839954	13839955	1	A	core_nonrep	12	1	1
Rue3-1-31	5	13841797	13841798	1	T	core_nonrep	3	1	1
Rue3-1-31	5	13869616	13869617	1	T	nonrep	3	0.75	1
Rue3-1-31	5	13877992	13877993	1	T	core_nonrep	4	1	1
Rue3-1-31	5	13885754	13885755	1	A	core_nonrep	6	1	1
Rue3-1-31	5	13896047	13896048	1	G	core_nonrep	3	1	1
Rue3-1-31	5	13898422	13898423	2	GA	core_nonrep	5	1	1
Rue3-1-31	5	13898423	13898424	1	T	core_nonrep	5	1	1
Rue3-1-31	5	13905160	13905161	1	A	core_nonrep	8	1	1
Rue3-1-31	5	13909048	13909049	1	G	core_nonrep	10	1	1
Rue3-1-31	5	13909246	13909247	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	13912453	13912454	2	TA	core_nonrep	7	0.857143	1
Rue3-1-31	5	13919509	13919510	1	T	core_nonrep	7	1	1
Rue3-1-31	5	13920434	13920435	1	T	core_nonrep	4	1	1
Rue3-1-31	5	13964355	13964356	1	T	core_nonrep	6	1	1
Rue3-1-31	5	13968053	13968054	1	T	core_nonrep	10	1	1
Rue3-1-31	5	13986967	13986968	2	AG	core_nonrep	7	1	1.1
Rue3-1-31	5	13989110	13989111	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	13989279	13989280	1	A	core_nonrep	3	1	1
Rue3-1-31	5	13990938	13990939	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	13991424	13991425	1	G	nonrep	3	1	1
Rue3-1-31	5	13994147	13994148	2	GC	core_nonrep	3	1	1
Rue3-1-31	5	13997696	13997697	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	13997770	13997771	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	13999886	13999887	1	G	core_nonrep	3	1	1
Rue3-1-31	5	14004683	14004684	1	G	core_nonrep	3	1	1
Rue3-1-31	5	14019033	14019034	3	AAA	core_nonrep	3	0.75	1
Rue3-1-31	5	14019058	14019059	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14024173	14024174	1	G	nonrep	3	1	1
Rue3-1-31	5	14024212	14024213	1	A	nonrep	4	1	1
Rue3-1-31	5	14034342	14034343	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	14052962	14052963	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14052963	14052964	2	GG	core_nonrep	3	1	1
Rue3-1-31	5	14064721	14064722	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	5	14065580	14065581	3	TTT	nonrep	3	0.75	1
Rue3-1-31	5	14068806	14068807	1	C	core_nonrep	4	1	1
Rue3-1-31	5	14069365	14069366	1	G	core_nonrep	4	1	1
Rue3-1-31	5	14069944	14069945	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	14075284	14075285	1	C	core_nonrep	4	1	1.2
Rue3-1-31	5	14080107	14080108	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14081438	14081439	1	G	core_nonrep	9	1	1
Rue3-1-31	5	14108539	14108540	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14121796	14121797	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	14124506	14124507	1	T	nonrep	3	0.75	1
Rue3-1-31	5	14125023	14125024	1	C	core_nonrep	5	0.833333	1
Rue3-1-31	5	14127326	14127327	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14134778	14134779	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	14136698	14136699	1	T	core_nonrep	6	1	1
Rue3-1-31	5	14140409	14140410	1	A	core_nonrep	6	1	1
Rue3-1-31	5	14140592	14140593	2	CA	core_nonrep	4	1	1
Rue3-1-31	5	14142004	14142005	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14143570	14143571	1	C	core_nonrep	6	1	1
Rue3-1-31	5	14145494	14145495	1	T	core_nonrep	10	0.769231	1
Rue3-1-31	5	14149118	14149119	2	TT	core_nonrep	9	1	1
Rue3-1-31	5	14158011	14158012	1	A	core_nonrep	4	0.75	1.2
Rue3-1-31	5	14160010	14160011	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14172098	14172099	1	A	core_nonrep	7	0.833333	1.25
Rue3-1-31	5	14173192	14173193	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	14200620	14200621	1	A	core_nonrep	5	1	1
Rue3-1-31	5	14202141	14202142	1	A	nonrep	4	0.8	1
Rue3-1-31	5	14207671	14207672	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	14212181	14212182	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14213896	14213897	1	T	core_nonrep	5	1	1
Rue3-1-31	5	14231568	14231569	1	G	core_nonrep	3	1	1
Rue3-1-31	5	14231692	14231693	1	A	core	3	0.75	1.4
Rue3-1-31	5	14243679	14243680	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14258733	14258734	1	T	core_nonrep	6	1	1.25
Rue3-1-31	5	14261262	14261263	3	ATT	core_nonrep	3	0.75	1
Rue3-1-31	5	14266507	14266508	1	A	core_nonrep	9	1	1
Rue3-1-31	5	14282933	14282934	1	A	nonrep	3	0.75	1
Rue3-1-31	5	14283268	14283269	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	14292066	14292067	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	14293510	14293511	1	A	core_nonrep	7	1	1
Rue3-1-31	5	14303586	14303587	1	A	core_nonrep	8	1	1
Rue3-1-31	5	14304755	14304756	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14306942	14306943	1	A	core_nonrep	7	1	1
Rue3-1-31	5	14307074	14307075	1	A	core_nonrep	11	0.714286	1.5625
Rue3-1-31	5	14312105	14312106	1	C	core_nonrep	3	1	1
Rue3-1-31	5	14317984	14317985	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14330822	14330823	1	A	nonrep	6	0.857143	1
Rue3-1-31	5	14335727	14335728	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	14552797	14552798	1	A	core_nonrep	5	1	1
Rue3-1-31	5	14552965	14552966	1	A	core_nonrep	8	1	1
Rue3-1-31	5	14558329	14558330	1	T	core_nonrep	8	1	1
Rue3-1-31	5	14559673	14559674	1	A	core_nonrep	13	1	1
Rue3-1-31	5	14560559	14560560	1	T	core_nonrep	6	1	1
Rue3-1-31	5	14561149	14561150	1	C	core_nonrep	7	1	1
Rue3-1-31	5	14562533	14562534	1	C	core_nonrep	9	1	1
Rue3-1-31	5	14563496	14563497	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	14570491	14570492	1	C	core_nonrep	3	1	1
Rue3-1-31	5	14571661	14571662	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	14571665	14571666	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	14591536	14591537	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14599021	14599022	1	T	core_nonrep	9	1	1
Rue3-1-31	5	14602872	14602873	1	T	core_nonrep	3	1	1
Rue3-1-31	5	14617622	14617623	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	14617788	14617789	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	14629843	14629844	1	G	core_nonrep	4	1	1
Rue3-1-31	5	14640714	14640715	1	T	core_nonrep	4	1	1
Rue3-1-31	5	14654063	14654064	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	14659472	14659473	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	14659929	14659930	1	G	core_nonrep	5	1	1
Rue3-1-31	5	14662314	14662315	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14667506	14667507	1	G	core_nonrep	6	1	1
Rue3-1-31	5	14668616	14668617	1	T	core_nonrep	7	1	1
Rue3-1-31	5	14668843	14668844	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14674306	14674307	1	A	core_nonrep	5	1	1
Rue3-1-31	5	14674803	14674804	1	C	core_nonrep	4	1	1
Rue3-1-31	5	14685237	14685238	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	14693936	14693937	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	14708258	14708259	1	A	core_nonrep	9	1	1
Rue3-1-31	5	14708259	14708260	2	GG	core_nonrep	9	1	1
Rue3-1-31	5	14714332	14714333	1	C	core_nonrep	3	1	1
Rue3-1-31	5	14714969	14714970	1	A	nonrep	6	1	1
Rue3-1-31	5	14716540	14716541	1	T	nonrep	5	1	1
Rue3-1-31	5	14724235	14724236	1	A	core_nonrep	11	0.9	1
Rue3-1-31	5	14725612	14725613	1	A	core_nonrep	6	1	1
Rue3-1-31	5	14726288	14726289	1	A	core_nonrep	6	1	1
Rue3-1-31	5	14728489	14728490	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	14728573	14728574	1	T	core_nonrep	8	1	1
Rue3-1-31	5	14732697	14732698	1	T	core_nonrep	9	1	1
Rue3-1-31	5	14732718	14732719	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	5	14737790	14737791	1	T	core_nonrep	7	1	1
Rue3-1-31	5	14740437	14740438	1	T	core_nonrep	5	1	1.2
Rue3-1-31	5	14782998	14782999	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	14783196	14783197	1	A	nonrep	6	1	1
Rue3-1-31	5	14783278	14783279	1	A	core_nonrep	5	1	1
Rue3-1-31	5	14784979	14784980	1	T	core_nonrep	4	1	1
Rue3-1-31	5	14784980	14784981	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14788119	14788120	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	14795101	14795102	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	14814393	14814394	1	C	core_nonrep	7	1	1
Rue3-1-31	5	14824698	14824699	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14827091	14827092	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	14836192	14836193	3	AAA	core_nonrep	9	1	1
Rue3-1-31	5	14836973	14836974	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14839110	14839111	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	14858584	14858585	1	C	core_nonrep	24	1	1
Rue3-1-31	5	14869750	14869751	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	5	14871327	14871328	2	AT	core_nonrep	17	1	1
Rue3-1-31	5	14872359	14872360	1	G	core_nonrep	8	1	1
Rue3-1-31	5	14875534	14875535	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	5	14885556	14885557	1	T	core_nonrep	8	1	1
Rue3-1-31	5	14885557	14885558	1	C	core_nonrep	8	1	1
Rue3-1-31	5	14891557	14891558	1	C	nonrep	4	1	1
Rue3-1-31	5	14891632	14891633	3	AAT	core_nonrep	6	0.75	1
Rue3-1-31	5	14892676	14892677	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	14892959	14892960	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	14893141	14893142	2	AC	core_nonrep	3	0.75	1
Rue3-1-31	5	14899027	14899028	1	T	core_nonrep	6	1	1
Rue3-1-31	5	14901248	14901249	3	AAG	core_nonrep	6	1	1
Rue3-1-31	5	14902624	14902625	1	A	core_nonrep	18	1	1
Rue3-1-31	5	14903008	14903009	1	T	core_nonrep	10	0.857143	1
Rue3-1-31	5	14906281	14906282	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	14906424	14906425	1	A	core_nonrep	6	1	1
Rue3-1-31	5	14906871	14906872	1	A	core_nonrep	8	1	1
Rue3-1-31	5	14908021	14908022	1	T	core_nonrep	6	1	1
Rue3-1-31	5	14911131	14911132	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	14911809	14911810	1	A	nonrep	3	0.75	1
Rue3-1-31	5	14913228	14913229	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14918480	14918481	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	14919033	14919034	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	14919321	14919322	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	14920893	14920894	1	C	core_nonrep	4	1	1
Rue3-1-31	5	14922250	14922251	1	T	core_nonrep	9	1	1
Rue3-1-31	5	14923383	14923384	1	T	core_nonrep	7	1	1
Rue3-1-31	5	14924264	14924265	1	T	core_nonrep	8	1	1
Rue3-1-31	5	14927006	14927007	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14927659	14927660	2	AC	core_nonrep	7	1	1
Rue3-1-31	5	14933378	14933379	1	T	core_nonrep	7	1	1
Rue3-1-31	5	14937191	14937192	1	A	core_nonrep	3	1	1
Rue3-1-31	5	14937407	14937408	1	T	core_nonrep	5	1	1
Rue3-1-31	5	14943526	14943527	3	GGA	core_nonrep	9	0.777778	1
Rue3-1-31	5	14949587	14949588	1	A	core_nonrep	6	1	1
Rue3-1-31	5	14950487	14950488	2	CC	core_nonrep	3	1	1
Rue3-1-31	5	14950543	14950544	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	14952146	14952147	1	A	core_nonrep	4	1	1
Rue3-1-31	5	14956294	14956295	1	C	core_nonrep	4	1	1
Rue3-1-31	5	14964633	14964634	1	A	core_nonrep	7	1	1
Rue3-1-31	5	14965425	14965426	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	14967104	14967105	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	14967154	14967155	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	5	14967710	14967711	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	5	14968644	14968645	1	T	core_nonrep	14	0.933333	1
Rue3-1-31	5	14968646	14968647	1	A	core_nonrep	15	1	1
Rue3-1-31	5	14968982	14968983	1	G	core_nonrep	8	1	1
Rue3-1-31	5	14969978	14969979	1	A	core_nonrep	7	1	1
Rue3-1-31	5	14990708	14990709	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	14990709	14990710	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	14991059	14991060	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	14993445	14993446	2	GA	core_nonrep	7	1	1
Rue3-1-31	5	14998251	14998252	2	GC	core_nonrep	8	0.875	1
Rue3-1-31	5	15000753	15000754	1	T	core_nonrep	18	1	1
Rue3-1-31	5	15011608	15011609	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	5	15014541	15014542	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15014724	15014725	1	G	core_nonrep	10	1	1
Rue3-1-31	5	15014905	15014906	1	T	core_nonrep	9	1	1
Rue3-1-31	5	15015055	15015056	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	15019882	15019883	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15020898	15020899	1	A	core_nonrep	8	1	1
Rue3-1-31	5	15020939	15020940	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15021807	15021808	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15021861	15021862	1	A	core_nonrep	9	1	1
Rue3-1-31	5	15024187	15024188	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	15025191	15025192	1	T	core_nonrep	13	1	1
Rue3-1-31	5	15028159	15028160	3	TGG	core_nonrep	8	0.888889	1
Rue3-1-31	5	15030543	15030544	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15044628	15044629	1	A	core_nonrep	5	1	1.16667
Rue3-1-31	5	15045896	15045897	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15046453	15046454	1	C	core_nonrep	7	0.75	1.09091
Rue3-1-31	5	15047365	15047366	1	G	core_nonrep	4	1	1
Rue3-1-31	5	15049222	15049223	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15049243	15049244	1	A	nonrep	3	0.75	1
Rue3-1-31	5	15052947	15052948	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15055033	15055034	1	C	core_nonrep	8	1	1
Rue3-1-31	5	15055501	15055502	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15056132	15056133	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15064696	15064697	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15073003	15073004	1	A	nonrep	3	1	1
Rue3-1-31	5	15078151	15078152	1	G	core_nonrep	9	1	1
Rue3-1-31	5	15078503	15078504	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15080572	15080573	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15080683	15080684	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	15080924	15080925	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15106971	15106972	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	15165098	15165099	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15235164	15235165	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	15237369	15237370	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15237688	15237689	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	15237931	15237932	1	C	core_nonrep	10	1	1
Rue3-1-31	5	15238019	15238020	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15245824	15245825	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15263597	15263598	1	A	nonrep	3	1	1
Rue3-1-31	5	15266981	15266982	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	5	15266982	15266983	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	5	15267259	15267260	1	G	core_nonrep	13	1	1
Rue3-1-31	5	15284111	15284112	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	15284113	15284114	1	C	core_nonrep	5	1	1
Rue3-1-31	5	15286050	15286051	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15297465	15297466	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15302082	15302083	1	T	core_nonrep	8	1	1
Rue3-1-31	5	15303308	15303309	1	A	core_nonrep	10	1	1
Rue3-1-31	5	15309822	15309823	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15310380	15310381	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15310461	15310462	1	A	core_nonrep	8	1	1
Rue3-1-31	5	15310548	15310549	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15325709	15325710	1	A	core_nonrep	6	1	1
Rue3-1-31	5	15325919	15325920	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15327741	15327742	2	AA	core_nonrep	5	0.75	1
Rue3-1-31	5	15328640	15328641	1	G	core_nonrep	8	0.75	1
Rue3-1-31	5	15330871	15330872	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	5	15331359	15331360	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15336872	15336873	1	C	core_nonrep	4	1	1
Rue3-1-31	5	15336873	15336874	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	15337591	15337592	1	C	core_nonrep	7	1	1
Rue3-1-31	5	15341295	15341296	1	T	core_nonrep	12	1	1
Rue3-1-31	5	15343865	15343866	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	15344161	15344162	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15344444	15344445	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	15344446	15344447	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15345003	15345004	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	15349098	15349099	1	T	nonrep	3	1	1
Rue3-1-31	5	15349836	15349837	1	G	core_nonrep	13	1	1
Rue3-1-31	5	15350930	15350931	2	AA	core_nonrep	5	0.75	1
Rue3-1-31	5	15360127	15360128	1	G	core_nonrep	3	1	1
Rue3-1-31	5	15362262	15362263	1	G	core_nonrep	6	1	1
Rue3-1-31	5	15362428	15362429	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15363875	15363876	1	G	core_nonrep	4	1	1
Rue3-1-31	5	15364118	15364119	1	T	core_nonrep	9	1	1
Rue3-1-31	5	15380826	15380827	1	G	core_nonrep	10	1	1
Rue3-1-31	5	15383465	15383466	1	T	core_nonrep	12	1	1
Rue3-1-31	5	15383623	15383624	1	T	core_nonrep	7	1	1
Rue3-1-31	5	15384252	15384253	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15392406	15392407	1	G	core_nonrep	3	1	1
Rue3-1-31	5	15397665	15397666	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	15408086	15408087	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	15408088	15408089	1	G	core_nonrep	4	1	1
Rue3-1-31	5	15409223	15409224	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	15409526	15409527	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	15427028	15427029	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15445362	15445363	1	T	core_nonrep	7	1	1.2
Rue3-1-31	5	15446429	15446430	1	A	core_nonrep	8	1	1
Rue3-1-31	5	15447400	15447401	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	15447531	15447532	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	15449025	15449026	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	15462551	15462552	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	15462552	15462553	1	G	core_nonrep	4	1	1
Rue3-1-31	5	15470709	15470710	1	C	core_nonrep	13	1	1
Rue3-1-31	5	15470912	15470913	2	AC	core_nonrep	13	1	1
Rue3-1-31	5	15479365	15479366	1	T	core_nonrep	5	1	1
Rue3-1-31	5	15480720	15480721	1	T	core	3	1	1.25
Rue3-1-31	5	15481188	15481189	1	T	core_nonrep	11	1	1
Rue3-1-31	5	15482146	15482147	2	TT	nonrep	4	0.8	1
Rue3-1-31	5	15483521	15483522	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15483522	15483523	1	C	core_nonrep	5	1	1
Rue3-1-31	5	15485088	15485089	1	T	core_nonrep	11	1	1
Rue3-1-31	5	15486522	15486523	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	5	15486668	15486669	1	G	core_nonrep	8	0.8	1
Rue3-1-31	5	15486677	15486678	1	T	core_nonrep	10	1	1
Rue3-1-31	5	15487118	15487119	1	T	core_nonrep	21	0.904762	1
Rue3-1-31	5	15488027	15488028	1	T	core_nonrep	9	1	1
Rue3-1-31	5	15488582	15488583	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15489721	15489722	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	15489722	15489723	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15501301	15501302	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15518270	15518271	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15519642	15519643	1	A	core_nonrep	9	1	1
Rue3-1-31	5	15525289	15525290	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	15539702	15539703	1	A	nonrep	3	1	1
Rue3-1-31	5	15543002	15543003	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15550937	15550938	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	15551653	15551654	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	15551856	15551857	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15554028	15554029	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	15554658	15554659	1	A	core_nonrep	13	1	1
Rue3-1-31	5	15557296	15557297	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15559327	15559328	1	T	nonrep	3	0.75	1
Rue3-1-31	5	15560214	15560215	1	A	nonrep	3	1	1
Rue3-1-31	5	15565387	15565388	1	C	core_nonrep	5	1	1
Rue3-1-31	5	15566307	15566308	1	T	core_nonrep	5	1	1
Rue3-1-31	5	15567431	15567432	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15567604	15567605	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	15571138	15571139	1	T	core_nonrep	12	1	1
Rue3-1-31	5	15575619	15575620	1	A	core_nonrep	6	1	1
Rue3-1-31	5	15578333	15578334	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15580513	15580514	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15590685	15590686	1	T	nonrep	3	0.75	1
Rue3-1-31	5	15593214	15593215	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	15593215	15593216	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15594708	15594709	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	15595879	15595880	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	15606846	15606847	1	T	core_nonrep	8	1	1
Rue3-1-31	5	15609028	15609029	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	5	15610104	15610105	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15611171	15611172	1	T	nonrep	4	0.8	1
Rue3-1-31	5	15613547	15613548	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15613552	15613553	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15617409	15617410	1	A	nonrep	5	0.714286	1
Rue3-1-31	5	15640755	15640756	1	C	core_nonrep	9	1	1
Rue3-1-31	5	15641460	15641461	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	15641491	15641492	1	T	nonrep	3	0.75	1
Rue3-1-31	5	15642422	15642423	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	15642588	15642589	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15642589	15642590	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15642816	15642817	1	A	core_nonrep	6	1	1
Rue3-1-31	5	15647465	15647466	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15648195	15648196	1	G	core_nonrep	5	1	1
Rue3-1-31	5	15649255	15649256	1	A	core_nonrep	8	1	1
Rue3-1-31	5	15650837	15650838	1	T	core_nonrep	5	1	1
Rue3-1-31	5	15651697	15651698	1	G	core_nonrep	8	1	1
Rue3-1-31	5	15652855	15652856	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	5	15658407	15658408	2	TT	core_nonrep	6	0.714286	1
Rue3-1-31	5	15658826	15658827	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15666392	15666393	2	TG	core_nonrep	4	1	1
Rue3-1-31	5	15668820	15668821	1	G	core_nonrep	3	1	1
Rue3-1-31	5	15677857	15677858	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15679307	15679308	1	A	nonrep	3	0.75	1
Rue3-1-31	5	15679702	15679703	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	15688857	15688858	1	C	core_nonrep	8	1	1.30769
Rue3-1-31	5	15718373	15718374	1	A	nonrep	7	0.7	1
Rue3-1-31	5	15718959	15718960	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15719304	15719305	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15719549	15719550	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15721432	15721433	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15721752	15721753	1	T	core_nonrep	7	1	1
Rue3-1-31	5	15722362	15722363	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15740884	15740885	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15742888	15742889	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	15742931	15742932	1	A	core_nonrep	9	1	1
Rue3-1-31	5	15745132	15745133	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	15746244	15746245	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	15746280	15746281	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15756453	15756454	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	5	15762394	15762395	1	C	core_nonrep	12	1	1
Rue3-1-31	5	15762838	15762839	1	G	core_nonrep	3	1	1
Rue3-1-31	5	15763460	15763461	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15768039	15768040	1	A	core_nonrep	10	1	1
Rue3-1-31	5	15768070	15768071	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	15775286	15775287	1	A	core_nonrep	13	1	1
Rue3-1-31	5	15788836	15788837	1	A	core_nonrep	6	1	1
Rue3-1-31	5	15789296	15789297	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	15794628	15794629	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	15794838	15794839	1	T	core_nonrep	5	1	1
Rue3-1-31	5	15794936	15794937	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15795346	15795347	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15795943	15795944	1	C	core_nonrep	7	1	1
Rue3-1-31	5	15795995	15795996	1	G	core_nonrep	5	0.8	1
Rue3-1-31	5	15796031	15796032	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	15799575	15799576	1	G	core_nonrep	7	1	1
Rue3-1-31	5	15800921	15800922	1	T	nonrep	4	0.8	1
Rue3-1-31	5	15809266	15809267	1	A	core_nonrep	14	0.928571	1
Rue3-1-31	5	15810027	15810028	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15810028	15810029	1	G	core_nonrep	4	1	1
Rue3-1-31	5	15812852	15812853	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15813082	15813083	1	A	core_nonrep	6	1	1
Rue3-1-31	5	15815641	15815642	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	5	15818345	15818346	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	15818699	15818700	2	AT	core_nonrep	8	1	1
Rue3-1-31	5	15825463	15825464	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15825490	15825491	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15826366	15826367	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15826484	15826485	1	T	core_nonrep	8	1	1
Rue3-1-31	5	15827427	15827428	1	T	core_nonrep	3	1	1
Rue3-1-31	5	15827428	15827429	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	15831698	15831699	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	15839201	15839202	1	T	core_nonrep	12	0.916667	1
Rue3-1-31	5	15839368	15839369	3	TCT	core_nonrep	5	1	1
Rue3-1-31	5	15839850	15839851	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15842034	15842035	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15842768	15842769	2	AG	core_nonrep	10	1	1
Rue3-1-31	5	15846779	15846780	1	C	core_nonrep	3	1	1
Rue3-1-31	5	15849141	15849142	2	AG	core_nonrep	3	1	1.16667
Rue3-1-31	5	15853402	15853403	1	A	core_nonrep	14	0.916667	1
Rue3-1-31	5	15853781	15853782	2	AA	core_nonrep	6	0.857143	1
Rue3-1-31	5	15853983	15853984	1	C	core_nonrep	6	0.75	1
Rue3-1-31	5	15864439	15864440	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15865095	15865096	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15865096	15865097	1	G	core_nonrep	3	1	1
Rue3-1-31	5	15865152	15865153	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	15866539	15866540	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	5	15867662	15867663	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	15879649	15879650	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	15881628	15881629	1	G	core_nonrep	9	1	1
Rue3-1-31	5	15882563	15882564	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	15882746	15882747	1	C	core_nonrep	7	0.8	1
Rue3-1-31	5	15885777	15885778	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15894172	15894173	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	15894580	15894581	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15907532	15907533	1	G	core_nonrep	8	1	1
Rue3-1-31	5	15907859	15907860	1	A	nonrep	4	1	1
Rue3-1-31	5	15909701	15909702	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	15917571	15917572	1	T	core_nonrep	14	1	1
Rue3-1-31	5	15919287	15919288	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	15919313	15919314	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15927422	15927423	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	15932890	15932891	2	TA	core_nonrep	5	0.8	1
Rue3-1-31	5	15935083	15935084	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	15935084	15935085	1	A	core_nonrep	3	1	1
Rue3-1-31	5	15935098	15935099	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	15936410	15936411	1	A	core_nonrep	9	1	1
Rue3-1-31	5	15936522	15936523	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15936683	15936684	1	A	core_nonrep	8	0.8	1
Rue3-1-31	5	15937652	15937653	1	A	core_nonrep	14	1	1
Rue3-1-31	5	15945918	15945919	1	A	core_nonrep	9	1	1
Rue3-1-31	5	15945972	15945973	1	C	core_nonrep	3	1	1
Rue3-1-31	5	15945985	15945986	1	C	core_nonrep	5	0.75	1
Rue3-1-31	5	15946085	15946086	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15947501	15947502	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15947727	15947728	1	T	core_nonrep	6	1	1
Rue3-1-31	5	15948181	15948182	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15950036	15950037	1	G	core_nonrep	6	1	1
Rue3-1-31	5	15950853	15950854	2	CA	core_nonrep	7	1	1
Rue3-1-31	5	15950961	15950962	1	T	core_nonrep	8	1	1
Rue3-1-31	5	15952598	15952599	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	15952605	15952606	1	A	core_nonrep	7	1	1
Rue3-1-31	5	15952740	15952741	1	C	core_nonrep	10	0.7	1
Rue3-1-31	5	15953092	15953093	1	T	core_nonrep	18	1	1
Rue3-1-31	5	15955996	15955997	2	AC	core_nonrep	4	0.75	1
Rue3-1-31	5	15955997	15955998	1	T	core_nonrep	4	1	1
Rue3-1-31	5	15956403	15956404	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	15957011	15957012	1	A	core_nonrep	17	0.736842	1
Rue3-1-31	5	15957016	15957017	1	T	core_nonrep	19	0.944444	1
Rue3-1-31	5	15959454	15959455	1	G	core_nonrep	10	1	1
Rue3-1-31	5	15963286	15963287	1	C	core_nonrep	5	1	1
Rue3-1-31	5	15967622	15967623	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	15971132	15971133	1	A	core_nonrep	4	1	1
Rue3-1-31	5	15984090	15984091	1	T	core_nonrep	9	1	1
Rue3-1-31	5	15984432	15984433	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	15986087	15986088	1	A	core_nonrep	5	1	1
Rue3-1-31	5	15989293	15989294	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	5	15996949	15996950	1	T	core_nonrep	5	1	1
Rue3-1-31	5	15998032	15998033	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16035628	16035629	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	16046325	16046326	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	16049674	16049675	1	G	core_nonrep	16	0.928571	1
Rue3-1-31	5	16051362	16051363	1	A	core_nonrep	7	1	1
Rue3-1-31	5	16052390	16052391	1	G	core_nonrep	15	0.916667	1
Rue3-1-31	5	16056032	16056033	1	A	nonrep	3	1	1
Rue3-1-31	5	16056639	16056640	1	A	core_nonrep	5	1	1.42857
Rue3-1-31	5	16058146	16058147	1	T	core_nonrep	13	0.9	1.06667
Rue3-1-31	5	16064865	16064866	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16065584	16065585	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16066249	16066250	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16069545	16069546	1	A	core_nonrep	6	0.75	1.46667
Rue3-1-31	5	16070515	16070516	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16071102	16071103	1	T	core_nonrep	6	1	1.28571
Rue3-1-31	5	16084946	16084947	1	A	core_nonrep	8	1	1
Rue3-1-31	5	16085097	16085098	1	T	core_nonrep	10	1	1
Rue3-1-31	5	16085748	16085749	1	T	core_nonrep	8	1	1
Rue3-1-31	5	16085952	16085953	1	A	core_nonrep	12	1	1
Rue3-1-31	5	16089042	16089043	2	TC	core_nonrep	6	0.75	1
Rue3-1-31	5	16112464	16112465	2	AT	core_nonrep	7	0.777778	1
Rue3-1-31	5	16158665	16158666	1	G	nonrep	3	1	1
Rue3-1-31	5	16158781	16158782	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16159268	16159269	1	G	nonrep	3	0.75	1
Rue3-1-31	5	16159965	16159966	1	T	core_nonrep	12	1	1
Rue3-1-31	5	16161901	16161902	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16164120	16164121	1	C	core_nonrep	5	1	1
Rue3-1-31	5	16164438	16164439	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16168888	16168889	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16173027	16173028	2	TA	core_nonrep	5	0.8	1
Rue3-1-31	5	16176224	16176225	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	5	16177706	16177707	1	T	core_nonrep	7	1	1
Rue3-1-31	5	16193220	16193221	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	16195831	16195832	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16214890	16214891	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16217988	16217989	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	16219009	16219010	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	5	16220109	16220110	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16221556	16221557	1	C	core_nonrep	6	1	1
Rue3-1-31	5	16222589	16222590	1	T	nonrep	3	1	1
Rue3-1-31	5	16224288	16224289	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	5	16227330	16227331	1	A	nonrep	4	1	1
Rue3-1-31	5	16227988	16227989	1	C	core_nonrep	9	1	1
Rue3-1-31	5	16229773	16229774	1	C	core_nonrep	5	1	1
Rue3-1-31	5	16237072	16237073	1	A	nonrep	3	0.75	1
Rue3-1-31	5	16260762	16260763	1	A	core_nonrep	7	1	1
Rue3-1-31	5	16260833	16260834	2	TC	core_nonrep	8	1	1
Rue3-1-31	5	16261591	16261592	1	C	nonrep	4	1	1
Rue3-1-31	5	16269781	16269782	1	C	core_nonrep	4	1	1
Rue3-1-31	5	16275692	16275693	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16288138	16288139	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16295092	16295093	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16295330	16295331	1	T	core_nonrep	9	1	1
Rue3-1-31	5	16307507	16307508	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16311696	16311697	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	16312241	16312242	1	C	core_nonrep	7	1	1
Rue3-1-31	5	16313603	16313604	1	G	core_nonrep	6	0.75	1
Rue3-1-31	5	16317376	16317377	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16328425	16328426	1	G	core_nonrep	5	1	1
Rue3-1-31	5	16333918	16333919	1	A	core_nonrep	8	0.75	1
Rue3-1-31	5	16333919	16333920	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	16339251	16339252	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16340485	16340486	2	CT	core_nonrep	4	1	1
Rue3-1-31	5	16341416	16341417	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	16345617	16345618	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16347114	16347115	1	T	core_nonrep	7	1	1
Rue3-1-31	5	16349256	16349257	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16349501	16349502	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16350523	16350524	1	G	core_nonrep	4	1	1
Rue3-1-31	5	16360014	16360015	2	CA	core_nonrep	8	0.777778	1
Rue3-1-31	5	16360666	16360667	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16370814	16370815	1	A	core_nonrep	23	1	1
Rue3-1-31	5	16377326	16377327	1	A	core_nonrep	12	0.833333	1
Rue3-1-31	5	16386083	16386084	1	T	core_nonrep	9	1	1.11111
Rue3-1-31	5	16387906	16387907	2	TG	core_nonrep	8	0.8	1
Rue3-1-31	5	16388057	16388058	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16388780	16388781	2	TG	core_nonrep	4	1	1
Rue3-1-31	5	16388782	16388783	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	16391944	16391945	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	16395442	16395443	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16396461	16396462	1	C	core_nonrep	14	0.9	1
Rue3-1-31	5	16403180	16403181	2	GA	nonrep	3	1	1
Rue3-1-31	5	16407388	16407389	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	16436699	16436700	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16437669	16437670	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	16441934	16441935	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	16445007	16445008	3	CTC	core_nonrep	4	0.75	1
Rue3-1-31	5	16447099	16447100	1	T	nonrep	5	0.714286	1
Rue3-1-31	5	16455341	16455342	1	A	core_nonrep	7	1	1
Rue3-1-31	5	16457769	16457770	1	C	core_nonrep	12	1	1
Rue3-1-31	5	16464824	16464825	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	16471617	16471618	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	16473023	16473024	1	A	core_nonrep	8	1	1
Rue3-1-31	5	16481581	16481582	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16489579	16489580	1	T	core_nonrep	7	1	1
Rue3-1-31	5	16498583	16498584	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	16507317	16507318	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	5	16515133	16515134	1	A	core_nonrep	9	1	1
Rue3-1-31	5	16515146	16515147	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16522193	16522194	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	16533559	16533560	2	CT	nonrep	9	0.9	1
Rue3-1-31	5	16536267	16536268	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16546379	16546380	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	16550211	16550212	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16563684	16563685	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	16568648	16568649	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16571616	16571617	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16575685	16575686	1	C	core_nonrep	4	1	1
Rue3-1-31	5	16576328	16576329	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	16576440	16576441	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16586079	16586080	1	A	core_nonrep	10	1	1
Rue3-1-31	5	16596204	16596205	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	16600056	16600057	1	C	nonrep	3	1	1
Rue3-1-31	5	16607408	16607409	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	5	16610282	16610283	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	16612744	16612745	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16616300	16616301	1	A	nonrep	4	1	1
Rue3-1-31	5	16619205	16619206	2	AC	core_nonrep	10	0.875	1
Rue3-1-31	5	16626863	16626864	2	AT	core_nonrep	6	0.833333	1
Rue3-1-31	5	16632813	16632814	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	16638039	16638040	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	16638778	16638779	1	A	core_nonrep	10	0.777778	1
Rue3-1-31	5	16638840	16638841	1	T	core_nonrep	10	0.875	1
Rue3-1-31	5	16640150	16640151	1	A	core_nonrep	7	1	1
Rue3-1-31	5	16640289	16640290	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16640651	16640652	1	G	core_nonrep	3	1	1
Rue3-1-31	5	16648812	16648813	1	C	core_nonrep	3	1	1
Rue3-1-31	5	16651497	16651498	1	A	core_nonrep	6	1	1
Rue3-1-31	5	16651548	16651549	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16651953	16651954	2	TC	core_nonrep	7	0.777778	1
Rue3-1-31	5	16652378	16652379	1	A	nonrep	4	0.8	1
Rue3-1-31	5	16652458	16652459	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16652685	16652686	1	T	core_nonrep	11	1	1
Rue3-1-31	5	16654501	16654502	1	C	core_nonrep	21	1	1
Rue3-1-31	5	16662508	16662509	2	CT	core_nonrep	4	0.8	1.125
Rue3-1-31	5	16663114	16663115	2	AC	core_nonrep	3	1	1
Rue3-1-31	5	16663305	16663306	1	T	nonrep	6	0.857143	1
Rue3-1-31	5	16663414	16663415	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	5	16664344	16664345	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	5	16664567	16664568	1	T	core_nonrep	9	1	1
Rue3-1-31	5	16666836	16666837	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16667168	16667169	1	A	nonrep	5	0.714286	1
Rue3-1-31	5	16670995	16670996	1	A	core_nonrep	11	0.727273	1
Rue3-1-31	5	16671344	16671345	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	16671675	16671676	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	16687864	16687865	3	CTT	core_nonrep	7	0.714286	1
Rue3-1-31	5	16690140	16690141	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16691038	16691039	1	C	core_nonrep	4	1	1
Rue3-1-31	5	16691624	16691625	1	T	core_nonrep	7	0.7	1
Rue3-1-31	5	16691625	16691626	1	C	core_nonrep	7	0.875	1
Rue3-1-31	5	16691627	16691628	1	C	core_nonrep	7	0.875	1
Rue3-1-31	5	16692907	16692908	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16693689	16693690	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	16698680	16698681	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16701993	16701994	1	T	nonrep	5	0.714286	1
Rue3-1-31	5	16705054	16705055	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	16707539	16707540	2	AT	core_nonrep	10	0.888889	1
Rue3-1-31	5	16709426	16709427	2	AC	core_nonrep	9	1	1
Rue3-1-31	5	16723396	16723397	1	G	nonrep	3	1	1
Rue3-1-31	5	16723466	16723467	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16724463	16724464	2	GT	core_nonrep	9	0.818182	1
Rue3-1-31	5	16727683	16727684	1	A	core_nonrep	9	1	1
Rue3-1-31	5	16728046	16728047	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16728158	16728159	1	G	core_nonrep	4	1	1
Rue3-1-31	5	16728159	16728160	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16728393	16728394	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16728619	16728620	2	TA	core_nonrep	7	1	1
Rue3-1-31	5	16729377	16729378	1	G	core_nonrep	4	0.75	1
Rue3-1-31	5	16729844	16729845	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	16731013	16731014	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16734123	16734124	1	G	core_nonrep	9	0.833333	1
Rue3-1-31	5	16739623	16739624	1	T	nonrep	3	0.75	1
Rue3-1-31	5	16740155	16740156	1	C	core_nonrep	3	1	1
Rue3-1-31	5	16742080	16742081	1	T	core_nonrep	10	1	1
Rue3-1-31	5	16742094	16742095	1	T	core_nonrep	11	1	1
Rue3-1-31	5	16742133	16742134	1	T	core_nonrep	7	0.8	1
Rue3-1-31	5	16742843	16742844	1	T	core_nonrep	10	1	1
Rue3-1-31	5	16750196	16750197	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16753290	16753291	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	16753357	16753358	3	CTG	core_nonrep	7	0.857143	1
Rue3-1-31	5	16757529	16757530	1	C	core_nonrep	7	1	1
Rue3-1-31	5	16759944	16759945	2	AT	core_nonrep	8	1	1
Rue3-1-31	5	16764235	16764236	1	A	nonrep	4	0.8	1
Rue3-1-31	5	16765739	16765740	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16774159	16774160	1	C	core_nonrep	9	1	1
Rue3-1-31	5	16776756	16776757	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16782246	16782247	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16784574	16784575	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16785876	16785877	1	A	core_nonrep	7	0.8	1
Rue3-1-31	5	16786153	16786154	1	C	nonrep	3	0.75	1
Rue3-1-31	5	16786155	16786156	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16786820	16786821	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	16787825	16787826	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	16789204	16789205	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	16814380	16814381	1	T	core_nonrep	8	1	1
Rue3-1-31	5	16816068	16816069	1	G	core_nonrep	4	1	1
Rue3-1-31	5	16817920	16817921	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	16822506	16822507	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16824022	16824023	1	A	core_nonrep	5	1	1
Rue3-1-31	5	16827873	16827874	1	T	core_nonrep	10	1	1
Rue3-1-31	5	16828015	16828016	1	C	core_nonrep	6	1	1
Rue3-1-31	5	16828501	16828502	1	A	core_nonrep	4	1	1
Rue3-1-31	5	16830011	16830012	1	T	core_nonrep	5	1	1
Rue3-1-31	5	16838713	16838714	1	G	core_nonrep	7	1	1
Rue3-1-31	5	16855479	16855480	2	AA	core_nonrep	10	0.9	1
Rue3-1-31	5	16859836	16859837	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16881625	16881626	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	16882029	16882030	1	T	core_nonrep	4	1	1
Rue3-1-31	5	16886716	16886717	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16889212	16889213	1	C	core_nonrep	4	1	1
Rue3-1-31	5	16904908	16904909	2	AG	core_nonrep	4	1	1
Rue3-1-31	5	16905522	16905523	1	T	core_nonrep	11	1	1
Rue3-1-31	5	16906789	16906790	1	C	nonrep	3	0.75	1
Rue3-1-31	5	16909191	16909192	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16910314	16910315	1	T	nonrep	3	1	1
Rue3-1-31	5	16911816	16911817	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16915210	16915211	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	16915211	16915212	2	CT	core_nonrep	5	0.833333	1
Rue3-1-31	5	16915256	16915257	1	A	core_nonrep	15	1	1
Rue3-1-31	5	16919094	16919095	1	T	core_nonrep	8	0.75	1
Rue3-1-31	5	16929592	16929593	1	G	core_nonrep	10	1	1
Rue3-1-31	5	16931535	16931536	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16932552	16932553	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	16937338	16937339	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	16938701	16938702	1	T	core_nonrep	15	1	1
Rue3-1-31	5	16938866	16938867	1	G	core_nonrep	3	1	1
Rue3-1-31	5	16938867	16938868	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	16941006	16941007	1	A	core_nonrep	7	1	1
Rue3-1-31	5	16941020	16941021	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	5	16947789	16947790	1	A	core_nonrep	6	1	1
Rue3-1-31	5	16948398	16948399	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16948871	16948872	2	GG	nonrep	3	0.75	1
Rue3-1-31	5	16951375	16951376	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	5	16955994	16955995	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	16959862	16959863	1	A	core_nonrep	3	1	1
Rue3-1-31	5	16963821	16963822	1	T	core_nonrep	6	1	1
Rue3-1-31	5	16963841	16963842	1	C	core_nonrep	5	1	1
Rue3-1-31	5	16968503	16968504	1	G	core_nonrep	12	1	1
Rue3-1-31	5	16968944	16968945	2	TA	nonrep	4	0.8	1
Rue3-1-31	5	16972121	16972122	1	A	core_nonrep	11	0.9	1
Rue3-1-31	5	16973529	16973530	1	G	core_nonrep	9	0.777778	1
Rue3-1-31	5	16974081	16974082	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	16980286	16980287	1	T	core_nonrep	17	0.928571	1
Rue3-1-31	5	16982379	16982380	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	16985757	16985758	2	AA	nonrep	3	0.75	1
Rue3-1-31	5	16988458	16988459	1	A	core_nonrep	9	1	1
Rue3-1-31	5	16992632	16992633	1	C	core_nonrep	8	1	1
Rue3-1-31	5	16993165	16993166	1	G	core_nonrep	6	1	1
Rue3-1-31	5	16993317	16993318	1	T	core_nonrep	8	1	1
Rue3-1-31	5	16999161	16999162	1	T	core_nonrep	3	1	1
Rue3-1-31	5	16999304	16999305	1	C	core_nonrep	6	1	1
Rue3-1-31	5	16999366	16999367	1	G	core_nonrep	6	1	1
Rue3-1-31	5	17010447	17010448	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17021829	17021830	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	17038300	17038301	1	T	core_nonrep	10	0.777778	1
Rue3-1-31	5	17040701	17040702	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17048809	17048810	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17049729	17049730	2	GC	core_nonrep	8	0.857143	1
Rue3-1-31	5	17056284	17056285	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17059241	17059242	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17065562	17065563	1	C	nonrep	3	0.75	1
Rue3-1-31	5	17066645	17066646	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17067213	17067214	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	17067481	17067482	1	C	nonrep	3	1	1
Rue3-1-31	5	17069564	17069565	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	17072520	17072521	1	C	core_nonrep	6	1	1
Rue3-1-31	5	17073077	17073078	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17073885	17073886	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17075767	17075768	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	17081483	17081484	1	T	nonrep	4	1	1
Rue3-1-31	5	17081686	17081687	1	C	core_nonrep	4	1	1
Rue3-1-31	5	17081714	17081715	1	C	nonrep	3	1	1
Rue3-1-31	5	17086804	17086805	1	G	nonrep	4	0.8	1
Rue3-1-31	5	17095239	17095240	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17095325	17095326	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	17095780	17095781	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	17095781	17095782	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17095782	17095783	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17105551	17105552	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17116838	17116839	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	17118253	17118254	1	T	core_nonrep	9	0.777778	1
Rue3-1-31	5	17120922	17120923	1	A	core_nonrep	11	1	1
Rue3-1-31	5	17127981	17127982	1	G	core_nonrep	8	1	1
Rue3-1-31	5	17133021	17133022	1	T	nonrep	4	1	1
Rue3-1-31	5	17133596	17133597	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17134316	17134317	1	T	core_nonrep	9	1	1
Rue3-1-31	5	17134551	17134552	1	A	core_nonrep	10	1	1
Rue3-1-31	5	17137523	17137524	1	A	nonrep	3	0.75	1
Rue3-1-31	5	17138936	17138937	1	T	core_nonrep	9	1	1
Rue3-1-31	5	17149084	17149085	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17174679	17174680	1	C	core_nonrep	21	1	1
Rue3-1-31	5	17180194	17180195	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	17183538	17183539	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	17184059	17184060	1	C	core_nonrep	18	0.923077	1
Rue3-1-31	5	17189440	17189441	1	T	core_nonrep	11	1	1
Rue3-1-31	5	17192547	17192548	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17200401	17200402	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17201101	17201102	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17201284	17201285	1	A	nonrep	4	0.8	1
Rue3-1-31	5	17202137	17202138	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	17202339	17202340	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17202819	17202820	1	C	core_nonrep	4	1	1
Rue3-1-31	5	17202852	17202853	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	17212857	17212858	1	A	core_nonrep	8	0.727273	1
Rue3-1-31	5	17213954	17213955	1	C	core_nonrep	8	0.875	1
Rue3-1-31	5	17215678	17215679	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17219744	17219745	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17223457	17223458	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17226104	17226105	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	5	17227412	17227413	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	17237881	17237882	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	17240288	17240289	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17251508	17251509	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17259006	17259007	1	C	core_nonrep	12	1	1
Rue3-1-31	5	17259343	17259344	1	C	core_nonrep	3	1	1
Rue3-1-31	5	17260264	17260265	1	G	core_nonrep	3	1	1
Rue3-1-31	5	17260711	17260712	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	5	17266125	17266126	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	5	17268034	17268035	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	17290133	17290134	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17292448	17292449	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	17297288	17297289	1	T	core_nonrep	8	0.888889	1
Rue3-1-31	5	17297289	17297290	2	AA	core_nonrep	8	0.888889	1
Rue3-1-31	5	17297754	17297755	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17298438	17298439	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17299755	17299756	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	17300255	17300256	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17300703	17300704	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	5	17307198	17307199	1	A	core_nonrep	10	1	1
Rue3-1-31	5	17308106	17308107	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17308343	17308344	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17308522	17308523	1	C	nonrep	3	0.75	1
Rue3-1-31	5	17310818	17310819	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	17312167	17312168	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17312336	17312337	1	A	core_nonrep	9	1	1
Rue3-1-31	5	17316023	17316024	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17316275	17316276	1	A	core_nonrep	11	1	1
Rue3-1-31	5	17316948	17316949	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17322117	17322118	1	G	core_nonrep	9	0.75	1
Rue3-1-31	5	17322544	17322545	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	5	17323629	17323630	1	G	core_nonrep	4	1	1
Rue3-1-31	5	17324546	17324547	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17325121	17325122	1	G	core_nonrep	8	0.888889	1
Rue3-1-31	5	17326229	17326230	1	T	core_nonrep	7	0.7	1
Rue3-1-31	5	17333904	17333905	2	CA	core_nonrep	11	0.909091	1
Rue3-1-31	5	17334511	17334512	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17334559	17334560	1	A	core_nonrep	7	0.75	1
Rue3-1-31	5	17337472	17337473	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17341362	17341363	1	T	core_nonrep	15	1	1
Rue3-1-31	5	17342065	17342066	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17342099	17342100	1	A	nonrep	3	0.75	1
Rue3-1-31	5	17342108	17342109	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17345193	17345194	1	T	core_nonrep	7	1	1
Rue3-1-31	5	17352460	17352461	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	17353407	17353408	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17355476	17355477	1	T	core_nonrep	7	0.8	1
Rue3-1-31	5	17359043	17359044	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17360638	17360639	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17362748	17362749	1	A	core_nonrep	22	1	1
Rue3-1-31	5	17363177	17363178	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17363294	17363295	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17365670	17365671	1	T	core_nonrep	10	1	1
Rue3-1-31	5	17365674	17365675	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	5	17366340	17366341	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	17372024	17372025	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	17378721	17378722	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	17394924	17394925	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17394935	17394936	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	5	17396442	17396443	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17397887	17397888	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17398850	17398851	1	C	core_nonrep	5	1	1
Rue3-1-31	5	17400904	17400905	1	G	core_nonrep	6	0.75	1
Rue3-1-31	5	17405945	17405946	1	C	core_nonrep	8	1	1
Rue3-1-31	5	17406068	17406069	2	CG	core_nonrep	14	1	1
Rue3-1-31	5	17406523	17406524	1	C	core_nonrep	5	0.714286	1
Rue3-1-31	5	17433839	17433840	1	T	core_nonrep	8	0.833333	1.6
Rue3-1-31	5	17436438	17436439	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	17437883	17437884	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17439762	17439763	1	C	core_nonrep	10	1	1
Rue3-1-31	5	17445442	17445443	1	T	core_nonrep	13	1	1
Rue3-1-31	5	17445592	17445593	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17450608	17450609	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17450609	17450610	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17453571	17453572	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	17460392	17460393	1	G	core_nonrep	13	0.846154	1
Rue3-1-31	5	17461286	17461287	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	5	17465723	17465724	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	17470218	17470219	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17470494	17470495	2	AA	nonrep	3	1	1
Rue3-1-31	5	17470705	17470706	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	17470976	17470977	2	TC	core_nonrep	4	0.8	1
Rue3-1-31	5	17476364	17476365	1	T	core_nonrep	7	1	1
Rue3-1-31	5	17482301	17482302	1	A	core_nonrep	8	0.875	1.09091
Rue3-1-31	5	17482476	17482477	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17483954	17483955	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17487593	17487594	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17493253	17493254	1	G	nonrep	3	1	1
Rue3-1-31	5	17494488	17494489	1	G	core_nonrep	3	0.75	1.28571
Rue3-1-31	5	17496487	17496488	2	AA	nonrep	4	1	1
Rue3-1-31	5	17504438	17504439	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17505969	17505970	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17506417	17506418	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17510079	17510080	1	A	core_nonrep	16	0.928571	1
Rue3-1-31	5	17511844	17511845	2	TA	core_nonrep	9	0.9	1
Rue3-1-31	5	17512056	17512057	2	GA	core_nonrep	3	1	1
Rue3-1-31	5	17512279	17512280	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17512401	17512402	1	A	core_nonrep	13	1	1
Rue3-1-31	5	17513546	17513547	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17514649	17514650	1	A	core_nonrep	18	0.846154	1
Rue3-1-31	5	17515605	17515606	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	5	17515785	17515786	1	A	core_nonrep	9	1	1
Rue3-1-31	5	17515965	17515966	1	G	core_nonrep	10	1	1
Rue3-1-31	5	17516678	17516679	1	T	nonrep	6	0.75	1
Rue3-1-31	5	17517612	17517613	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17518009	17518010	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17519221	17519222	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17525274	17525275	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	17526942	17526943	1	T	core_nonrep	8	1	1
Rue3-1-31	5	17527884	17527885	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17528443	17528444	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17535212	17535213	1	G	core_nonrep	3	1	1
Rue3-1-31	5	17535311	17535312	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17535312	17535313	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17535313	17535314	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17543598	17543599	1	C	nonrep	3	1	1
Rue3-1-31	5	17545013	17545014	2	GA	core_nonrep	11	0.9	1
Rue3-1-31	5	17549659	17549660	1	T	core_nonrep	9	1	1
Rue3-1-31	5	17560260	17560261	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	17560637	17560638	1	C	core_nonrep	4	1	1
Rue3-1-31	5	17565867	17565868	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17567240	17567241	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17570858	17570859	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17573777	17573778	1	T	core_nonrep	12	0.833333	1
Rue3-1-31	5	17588945	17588946	1	A	core_nonrep	9	1	1
Rue3-1-31	5	17590732	17590733	1	A	nonrep	4	0.8	1
Rue3-1-31	5	17595454	17595455	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	17595468	17595469	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	17596222	17596223	1	A	nonrep	3	0.75	1
Rue3-1-31	5	17597233	17597234	1	A	nonrep	3	0.75	1
Rue3-1-31	5	17598373	17598374	1	C	core_nonrep	8	1	1
Rue3-1-31	5	17598482	17598483	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	17600068	17600069	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17604514	17604515	1	C	core_nonrep	4	1	1
Rue3-1-31	5	17604515	17604516	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17605715	17605716	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17606620	17606621	1	T	nonrep	3	1	1
Rue3-1-31	5	17610714	17610715	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17610921	17610922	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	17613076	17613077	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17620415	17620416	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17622290	17622291	2	TT	core_nonrep	23	0.741935	1.28261
Rue3-1-31	5	17625645	17625646	1	T	nonrep	3	0.75	1
Rue3-1-31	5	17633812	17633813	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	17634018	17634019	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17638715	17638716	1	C	core_nonrep	4	1	1
Rue3-1-31	5	17639768	17639769	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17640944	17640945	1	G	core_nonrep	14	1	1
Rue3-1-31	5	17646525	17646526	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17647266	17647267	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17653173	17653174	2	GC	core_nonrep	7	1	1
Rue3-1-31	5	17654187	17654188	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	17663362	17663363	1	G	core_nonrep	6	1	1
Rue3-1-31	5	17663381	17663382	2	GT	core_nonrep	6	1	1
Rue3-1-31	5	17663928	17663929	1	T	core_nonrep	8	1	1
Rue3-1-31	5	17664156	17664157	2	CT	core_nonrep	4	1	1
Rue3-1-31	5	17665374	17665375	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	17667564	17667565	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	17669538	17669539	1	A	core_nonrep	5	1	1
Rue3-1-31	5	17669574	17669575	2	TT	core_nonrep	7	1	1
Rue3-1-31	5	17670841	17670842	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	17675927	17675928	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17680319	17680320	1	C	core_nonrep	3	1	1
Rue3-1-31	5	17680853	17680854	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17682055	17682056	1	C	core_nonrep	16	1	1
Rue3-1-31	5	17682075	17682076	1	A	core_nonrep	17	0.933333	1
Rue3-1-31	5	17683828	17683829	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17684953	17684954	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17689623	17689624	1	T	nonrep	3	0.75	1
Rue3-1-31	5	17690371	17690372	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	17693918	17693919	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17699262	17699263	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	5	17701275	17701276	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17714146	17714147	1	T	core_nonrep	8	1	1
Rue3-1-31	5	17716566	17716567	1	T	core_nonrep	10	0.909091	1
Rue3-1-31	5	17716567	17716568	2	CA	core_nonrep	10	1	1
Rue3-1-31	5	17719097	17719098	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17719098	17719099	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17730111	17730112	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	17730183	17730184	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	17740007	17740008	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	17743328	17743329	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	5	17743367	17743368	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17757350	17757351	1	C	core_nonrep	9	1	1
Rue3-1-31	5	17757369	17757370	1	T	core_nonrep	10	1	1
Rue3-1-31	5	17760647	17760648	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	5	17762505	17762506	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	17766340	17766341	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17766343	17766344	1	G	core_nonrep	9	0.875	1
Rue3-1-31	5	17766533	17766534	1	T	core_nonrep	9	0.857143	1
Rue3-1-31	5	17768308	17768309	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17769646	17769647	2	AA	core_nonrep	6	0.714286	1
Rue3-1-31	5	17771715	17771716	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17772551	17772552	1	A	core_nonrep	9	1	1
Rue3-1-31	5	17786006	17786007	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17796605	17796606	1	T	core_nonrep	14	0.866667	1
Rue3-1-31	5	17796606	17796607	2	AC	core_nonrep	15	0.933333	1
Rue3-1-31	5	17798433	17798434	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17798436	17798437	1	G	core_nonrep	8	0.833333	1
Rue3-1-31	5	17798437	17798438	1	T	core_nonrep	8	1	1
Rue3-1-31	5	17799390	17799391	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	17800290	17800291	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17807407	17807408	1	T	core_nonrep	13	1	1
Rue3-1-31	5	17807974	17807975	1	T	core_nonrep	7	0.75	1
Rue3-1-31	5	17815419	17815420	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17815572	17815573	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17819730	17819731	2	TG	core_nonrep	14	1	1
Rue3-1-31	5	17820058	17820059	1	G	core_nonrep	13	1	1
Rue3-1-31	5	17820193	17820194	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17831159	17831160	1	G	core_nonrep	3	1	1
Rue3-1-31	5	17836872	17836873	1	G	core_nonrep	13	0.8	1
Rue3-1-31	5	17837066	17837067	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17837411	17837412	1	G	core_nonrep	3	1	1
Rue3-1-31	5	17837412	17837413	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17838320	17838321	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17839880	17839881	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	17839881	17839882	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17841007	17841008	1	G	core_nonrep	3	1	1
Rue3-1-31	5	17841597	17841598	1	A	core_nonrep	10	1	1
Rue3-1-31	5	17842498	17842499	1	G	nonrep	4	0.8	1
Rue3-1-31	5	17842608	17842609	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	17842610	17842611	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17843912	17843913	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17843913	17843914	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	17848701	17848702	1	T	nonrep	3	0.75	1
Rue3-1-31	5	17849109	17849110	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17851689	17851690	1	T	core_nonrep	22	1	1
Rue3-1-31	5	17851733	17851734	1	A	core_nonrep	12	1	1
Rue3-1-31	5	17857085	17857086	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	17857794	17857795	2	TA	core_nonrep	4	0.8	1
Rue3-1-31	5	17862777	17862778	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	17871812	17871813	1	G	nonrep	4	0.8	1
Rue3-1-31	5	17877379	17877380	1	A	core_nonrep	25	1	1
Rue3-1-31	5	17877421	17877422	1	G	core_nonrep	13	1	1
Rue3-1-31	5	17881108	17881109	1	G	core_nonrep	13	0.833333	1
Rue3-1-31	5	17881119	17881120	1	A	core_nonrep	14	1	1
Rue3-1-31	5	17888150	17888151	2	GT	core_nonrep	3	1	1
Rue3-1-31	5	17895050	17895051	1	T	core_nonrep	3	1	1
Rue3-1-31	5	17901056	17901057	2	AT	core_nonrep	5	0.8	1
Rue3-1-31	5	17901363	17901364	1	G	core_nonrep	5	1	1
Rue3-1-31	5	17919847	17919848	1	T	core_nonrep	7	1	1
Rue3-1-31	5	17921579	17921580	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	17923945	17923946	3	TAT	core_nonrep	7	1	1
Rue3-1-31	5	17924886	17924887	2	TT	core_nonrep	6	1	1
Rue3-1-31	5	17930220	17930221	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	5	17931030	17931031	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	17931966	17931967	1	T	core_nonrep	7	1	1
Rue3-1-31	5	17935693	17935694	3	TTT	core_nonrep	6	0.8	1
Rue3-1-31	5	17936736	17936737	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	17937028	17937029	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17938284	17938285	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17938401	17938402	1	A	core_nonrep	3	1	1
Rue3-1-31	5	17938506	17938507	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	17939264	17939265	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	17939632	17939633	1	T	core_nonrep	4	1	1
Rue3-1-31	5	17954181	17954182	1	A	core_nonrep	8	1	1
Rue3-1-31	5	17955697	17955698	2	TT	core_nonrep	7	0.875	1
Rue3-1-31	5	17958454	17958455	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	17958908	17958909	1	T	core_nonrep	10	0.777778	1
Rue3-1-31	5	17958909	17958910	1	G	core_nonrep	10	0.777778	1
Rue3-1-31	5	17959074	17959075	2	AT	core_nonrep	6	1	1
Rue3-1-31	5	17959210	17959211	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17959807	17959808	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17961472	17961473	1	A	core_nonrep	7	1	1
Rue3-1-31	5	17963966	17963967	1	T	core_nonrep	12	1	1
Rue3-1-31	5	17964240	17964241	1	C	core_nonrep	8	1	1
Rue3-1-31	5	17965529	17965530	1	T	core_nonrep	5	1	1
Rue3-1-31	5	17965837	17965838	1	C	nonrep	4	1	1
Rue3-1-31	5	17975123	17975124	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	17976506	17976507	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	17978027	17978028	1	A	core_nonrep	4	1	1
Rue3-1-31	5	17981450	17981451	1	A	core_nonrep	6	1	1
Rue3-1-31	5	17981476	17981477	2	TA	core_nonrep	12	0.75	1
Rue3-1-31	5	17982612	17982613	1	T	core_nonrep	6	1	1
Rue3-1-31	5	17983921	17983922	1	A	core_nonrep	10	0.75	1
Rue3-1-31	5	17983922	17983923	1	C	core_nonrep	11	0.692308	1
Rue3-1-31	5	17984057	17984058	1	A	core_nonrep	15	1	1
Rue3-1-31	5	17987624	17987625	1	A	core_nonrep	7	1	1
Rue3-1-31	5	18002881	18002882	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18002904	18002905	1	C	core_nonrep	4	1	1
Rue3-1-31	5	18003535	18003536	1	G	nonrep	7	0.875	1
Rue3-1-31	5	18012412	18012413	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18012534	18012535	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18017806	18017807	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	18030487	18030488	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18030994	18030995	1	T	core_nonrep	9	1	1
Rue3-1-31	5	18031918	18031919	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18041289	18041290	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	18043381	18043382	1	A	core_nonrep	8	1	1
Rue3-1-31	5	18054920	18054921	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	18055401	18055402	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18055728	18055729	1	C	core_nonrep	4	1	1
Rue3-1-31	5	18056204	18056205	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18056862	18056863	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	18056863	18056864	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	18057718	18057719	1	A	core_nonrep	5	1	1
Rue3-1-31	5	18058648	18058649	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	18060833	18060834	1	C	core_nonrep	6	1	1
Rue3-1-31	5	18060834	18060835	1	G	core_nonrep	6	1	1
Rue3-1-31	5	18060932	18060933	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	18062077	18062078	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	18064084	18064085	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	18065077	18065078	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	5	18065125	18065126	1	A	core_nonrep	9	1	1
Rue3-1-31	5	18066591	18066592	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18066775	18066776	1	A	nonrep	3	1	1
Rue3-1-31	5	18068779	18068780	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18070147	18070148	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18070945	18070946	1	C	core_nonrep	10	0.888889	1
Rue3-1-31	5	18079749	18079750	1	A	core_nonrep	17	0.882353	1
Rue3-1-31	5	18079817	18079818	1	T	core_nonrep	16	0.941176	1
Rue3-1-31	5	18080700	18080701	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18080754	18080755	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18084838	18084839	1	A	core_nonrep	15	1	1
Rue3-1-31	5	18085043	18085044	1	T	core_nonrep	7	1	1
Rue3-1-31	5	18088038	18088039	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18088071	18088072	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18090504	18090505	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	18098433	18098434	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18099076	18099077	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18111391	18111392	1	T	nonrep	3	1	1
Rue3-1-31	5	18112679	18112680	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18115420	18115421	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18115760	18115761	1	T	core_nonrep	5	1	1
Rue3-1-31	5	18126938	18126939	2	TG	core_nonrep	10	0.9	1
Rue3-1-31	5	18127893	18127894	1	A	nonrep	4	0.8	1
Rue3-1-31	5	18131853	18131854	1	C	core_nonrep	10	0.777778	1
Rue3-1-31	5	18156107	18156108	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18165713	18165714	1	A	core_nonrep	12	1	1
Rue3-1-31	5	18167891	18167892	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	18167892	18167893	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18175305	18175306	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	18175507	18175508	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	18175969	18175970	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18176357	18176358	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18177027	18177028	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18177048	18177049	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	18179378	18179379	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18186963	18186964	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	18187227	18187228	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	18189913	18189914	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18190013	18190014	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18190765	18190766	2	GG	core_nonrep	4	1	1
Rue3-1-31	5	18191435	18191436	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18199065	18199066	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18199771	18199772	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	18203435	18203436	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	18203563	18203564	1	A	core_nonrep	16	1	1
Rue3-1-31	5	18233289	18233290	1	T	core_nonrep	9	1	1
Rue3-1-31	5	18233986	18233987	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	18235508	18235509	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18238376	18238377	1	A	core_nonrep	5	1	1
Rue3-1-31	5	18239523	18239524	1	G	nonrep	4	1	1
Rue3-1-31	5	18239551	18239552	1	T	core_nonrep	7	1	1
Rue3-1-31	5	18239625	18239626	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	18239974	18239975	1	T	core_nonrep	22	0.944444	1
Rue3-1-31	5	18243105	18243106	1	A	core_nonrep	14	1	1
Rue3-1-31	5	18243271	18243272	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	18245972	18245973	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18260395	18260396	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18260401	18260402	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	18260651	18260652	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18260839	18260840	1	A	core_nonrep	7	1	1
Rue3-1-31	5	18262000	18262001	1	T	core_nonrep	7	1	1
Rue3-1-31	5	18263672	18263673	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	18263681	18263682	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18263708	18263709	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18264300	18264301	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18264813	18264814	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	18265030	18265031	2	GT	core_nonrep	11	0.833333	1
Rue3-1-31	5	18266039	18266040	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18266040	18266041	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	5	18266486	18266487	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18266490	18266491	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	18273085	18273086	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18274950	18274951	1	T	core_nonrep	9	1	1
Rue3-1-31	5	18276786	18276787	1	C	core_nonrep	7	1	1.1
Rue3-1-31	5	18286285	18286286	2	AG	core_nonrep	3	1	1
Rue3-1-31	5	18287338	18287339	1	A	core_nonrep	8	0.833333	1
Rue3-1-31	5	18287725	18287726	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	18290004	18290005	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	5	18296927	18296928	1	T	core_nonrep	5	0.75	1
Rue3-1-31	5	18306393	18306394	1	T	nonrep	3	1	1
Rue3-1-31	5	18306554	18306555	2	AA	nonrep	3	1	1
Rue3-1-31	5	18307959	18307960	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18308142	18308143	1	T	core_nonrep	7	1	1
Rue3-1-31	5	18309264	18309265	1	T	core_nonrep	5	1	1
Rue3-1-31	5	18311151	18311152	2	TT	core_nonrep	9	0.75	1
Rue3-1-31	5	18311168	18311169	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	5	18338106	18338107	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	18341382	18341383	2	AC	core_nonrep	9	0.875	1
Rue3-1-31	5	18345558	18345559	1	G	core_nonrep	6	1	1
Rue3-1-31	5	18349712	18349713	1	A	core_nonrep	9	0.727273	1
Rue3-1-31	5	18353571	18353572	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18357081	18357082	1	A	core_nonrep	10	1	1
Rue3-1-31	5	18360580	18360581	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18361361	18361362	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18364301	18364302	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18365541	18365542	1	C	core_nonrep	7	1	1
Rue3-1-31	5	18366253	18366254	2	AC	core_nonrep	8	0.8	1
Rue3-1-31	5	18369848	18369849	1	T	core_nonrep	10	0.727273	1
Rue3-1-31	5	18575745	18575746	1	G	core_nonrep	5	0.714286	1.3
Rue3-1-31	5	18639502	18639503	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	18660326	18660327	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18661171	18661172	1	A	core_nonrep	3	1	1
Rue3-1-31	5	18661577	18661578	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18665046	18665047	1	A	nonrep	3	1	1
Rue3-1-31	5	18667863	18667864	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	18683989	18683990	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	18688084	18688085	1	G	core_nonrep	4	1	1
Rue3-1-31	5	18690879	18690880	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18691198	18691199	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18694023	18694024	1	A	core_nonrep	8	1	1
Rue3-1-31	5	18696357	18696358	1	T	nonrep	7	0.7	1
Rue3-1-31	5	18696512	18696513	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	18708615	18708616	1	C	core_nonrep	4	1	1
Rue3-1-31	5	18708925	18708926	1	A	nonrep	4	0.8	1
Rue3-1-31	5	18709143	18709144	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	18709451	18709452	1	T	core_nonrep	5	1	1
Rue3-1-31	5	18710071	18710072	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	18710072	18710073	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	18710415	18710416	1	C	core_nonrep	5	1	1
Rue3-1-31	5	18718081	18718082	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18719514	18719515	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18721796	18721797	1	C	core_nonrep	3	1	1
Rue3-1-31	5	18723338	18723339	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	5	18734077	18734078	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18735069	18735070	2	AC	core_nonrep	6	1	1
Rue3-1-31	5	18738873	18738874	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	18738875	18738876	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18738896	18738897	2	GA	core_nonrep	3	1	1
Rue3-1-31	5	18740243	18740244	2	AT	core_nonrep	7	0.875	1
Rue3-1-31	5	18740245	18740246	1	G	core_nonrep	7	0.875	1
Rue3-1-31	5	18745100	18745101	1	T	nonrep	3	0.75	1
Rue3-1-31	5	18747325	18747326	3	AAT	core_nonrep	5	0.714286	1
Rue3-1-31	5	18747624	18747625	2	TG	core_nonrep	6	0.75	1
Rue3-1-31	5	18748682	18748683	1	T	core_nonrep	5	1	1
Rue3-1-31	5	18748712	18748713	1	A	nonrep	3	0.75	1
Rue3-1-31	5	18759641	18759642	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18769322	18769323	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18769334	18769335	1	T	nonrep	5	1	1
Rue3-1-31	5	18769389	18769390	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18769486	18769487	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18774334	18774335	2	GA	core_nonrep	7	1	1
Rue3-1-31	5	18774906	18774907	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	18777781	18777782	1	G	core_nonrep	7	0.857143	1
Rue3-1-31	5	18783355	18783356	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18786080	18786081	1	A	core_nonrep	8	1	1
Rue3-1-31	5	18796750	18796751	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18796835	18796836	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	18797586	18797587	1	C	core_nonrep	5	1	1
Rue3-1-31	5	18801031	18801032	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	18802015	18802016	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18806693	18806694	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18807523	18807524	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18812743	18812744	1	T	core_nonrep	8	1	1
Rue3-1-31	5	18817817	18817818	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18820575	18820576	1	A	core_nonrep	6	1	1
Rue3-1-31	5	18821308	18821309	1	A	core_nonrep	5	1	1
Rue3-1-31	5	18832518	18832519	1	T	core_nonrep	15	1	1
Rue3-1-31	5	18835908	18835909	1	C	core_nonrep	10	1	1
Rue3-1-31	5	18865056	18865057	1	A	core_nonrep	5	1	1
Rue3-1-31	5	18866069	18866070	3	TGG	core_nonrep	14	1	1
Rue3-1-31	5	18885001	18885002	1	T	core_nonrep	3	1	1
Rue3-1-31	5	18895779	18895780	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	5	18896777	18896778	1	G	core_nonrep	5	1	1
Rue3-1-31	5	18907530	18907531	1	G	core_nonrep	9	1	1
Rue3-1-31	5	18923131	18923132	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	18933524	18933525	1	G	core_nonrep	4	0.75	1
Rue3-1-31	5	18940516	18940517	1	A	core_nonrep	14	1	1
Rue3-1-31	5	18947100	18947101	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18986392	18986393	1	T	core_nonrep	4	1	1
Rue3-1-31	5	18989130	18989131	1	T	core_nonrep	6	1	1
Rue3-1-31	5	18989510	18989511	1	A	core_nonrep	4	1	1
Rue3-1-31	5	18989956	18989957	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	18997351	18997352	1	G	core_nonrep	7	1	1
Rue3-1-31	5	18999079	18999080	1	G	core_nonrep	7	1	1
Rue3-1-31	5	19003803	19003804	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	19005301	19005302	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	19007120	19007121	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19007967	19007968	2	AG	core_nonrep	9	1	1
Rue3-1-31	5	19008011	19008012	1	T	core_nonrep	11	1	1
Rue3-1-31	5	19009632	19009633	1	A	core_nonrep	8	1	1
Rue3-1-31	5	19015159	19015160	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19016784	19016785	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	19016787	19016788	1	G	core_nonrep	3	1	1
Rue3-1-31	5	19022180	19022181	1	T	nonrep	3	0.75	1
Rue3-1-31	5	19027036	19027037	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19037368	19037369	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19044037	19044038	1	G	core_nonrep	6	1	1
Rue3-1-31	5	19047622	19047623	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	19047830	19047831	2	AA	core_nonrep	6	0.833333	1
Rue3-1-31	5	19048355	19048356	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19049448	19049449	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	19055108	19055109	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19055202	19055203	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19055396	19055397	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	19056479	19056480	1	A	nonrep	3	0.75	1
Rue3-1-31	5	19058951	19058952	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	19059209	19059210	1	G	core_nonrep	8	1	1
Rue3-1-31	5	19059245	19059246	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	19059248	19059249	1	C	core_nonrep	8	0.857143	1
Rue3-1-31	5	19061803	19061804	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19061806	19061807	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19078779	19078780	1	A	core_nonrep	7	1	1.28571
Rue3-1-31	5	19093095	19093096	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	19098883	19098884	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19110778	19110779	1	G	core_nonrep	11	1	1
Rue3-1-31	5	19115089	19115090	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	19116184	19116185	1	A	core_nonrep	9	1	1
Rue3-1-31	5	19116584	19116585	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19118606	19118607	1	C	core_nonrep	5	1	1
Rue3-1-31	5	19130335	19130336	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19137810	19137811	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	19138583	19138584	1	A	nonrep	3	0.75	1
Rue3-1-31	5	19142352	19142353	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	19155689	19155690	1	A	nonrep	3	1	1
Rue3-1-31	5	19157516	19157517	1	G	nonrep	4	0.8	1
Rue3-1-31	5	19165477	19165478	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19172417	19172418	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19184092	19184093	1	C	core_nonrep	10	0.818182	1
Rue3-1-31	5	19193935	19193936	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	5	19194212	19194213	2	CT	core_nonrep	3	0.75	1
Rue3-1-31	5	19199542	19199543	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	5	19201679	19201680	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19202458	19202459	1	T	core_nonrep	17	0.9375	1
Rue3-1-31	5	19217273	19217274	1	C	core_nonrep	6	1	1
Rue3-1-31	5	19237736	19237737	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	19241213	19241214	1	A	core_nonrep	9	1	1
Rue3-1-31	5	19246552	19246553	2	AA	core_nonrep	12	0.846154	1
Rue3-1-31	5	19248886	19248887	1	T	nonrep	3	0.75	1
Rue3-1-31	5	19262625	19262626	1	T	core_nonrep	9	1	1
Rue3-1-31	5	19267911	19267912	2	AG	core_nonrep	5	1	1
Rue3-1-31	5	19269058	19269059	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	5	19272150	19272151	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19280959	19280960	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19287165	19287166	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	19288249	19288250	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19291907	19291908	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	19297127	19297128	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	19301884	19301885	1	C	core_nonrep	11	0.888889	1
Rue3-1-31	5	19303154	19303155	1	G	core_nonrep	6	1	1
Rue3-1-31	5	19303804	19303805	1	G	core_nonrep	8	1	1
Rue3-1-31	5	19304849	19304850	1	G	core_nonrep	7	1	1
Rue3-1-31	5	19304873	19304874	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	19304877	19304878	1	A	nonrep	3	0.75	1
Rue3-1-31	5	19307912	19307913	1	A	core_nonrep	7	1	1
Rue3-1-31	5	19308559	19308560	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19312020	19312021	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19318506	19318507	2	AG	core_nonrep	4	1	1
Rue3-1-31	5	19323401	19323402	2	TC	core_nonrep	8	1	1
Rue3-1-31	5	19324418	19324419	1	A	core_nonrep	11	1	1
Rue3-1-31	5	19324420	19324421	1	T	core_nonrep	11	1	1
Rue3-1-31	5	19328708	19328709	1	A	core_nonrep	17	0.736842	1
Rue3-1-31	5	19330054	19330055	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19354922	19354923	1	C	core_nonrep	5	1	1
Rue3-1-31	5	19354991	19354992	1	G	core_nonrep	16	1	1
Rue3-1-31	5	19356912	19356913	2	AA	core_nonrep	8	0.888889	1
Rue3-1-31	5	19359214	19359215	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	19359972	19359973	1	T	core_nonrep	9	1	1
Rue3-1-31	5	19361601	19361602	2	AA	core_nonrep	8	0.727273	1
Rue3-1-31	5	19362817	19362818	1	T	core_nonrep	12	0.923077	1
Rue3-1-31	5	19364328	19364329	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19364493	19364494	1	T	core_nonrep	12	0.8	1
Rue3-1-31	5	19364495	19364496	2	GA	core_nonrep	13	0.8	1
Rue3-1-31	5	19364961	19364962	1	C	core_nonrep	3	1	1
Rue3-1-31	5	19364962	19364963	2	GA	core_nonrep	3	1	1
Rue3-1-31	5	19370066	19370067	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	19370327	19370328	1	A	core_nonrep	8	1	1
Rue3-1-31	5	19371188	19371189	1	G	nonrep	7	0.777778	1
Rue3-1-31	5	19373355	19373356	1	T	core_nonrep	13	1	1
Rue3-1-31	5	19374689	19374690	1	A	core_nonrep	14	0.933333	1
Rue3-1-31	5	19382084	19382085	1	C	core_nonrep	4	1	1
Rue3-1-31	5	19382445	19382446	1	A	nonrep	6	0.75	1
Rue3-1-31	5	19382567	19382568	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19383474	19383475	1	G	core_nonrep	4	1	1
Rue3-1-31	5	19385669	19385670	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	19391700	19391701	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19391767	19391768	1	C	core_nonrep	5	1	1
Rue3-1-31	5	19392045	19392046	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19392197	19392198	1	A	core_nonrep	13	1	1
Rue3-1-31	5	19394947	19394948	1	C	core_nonrep	7	1	1
Rue3-1-31	5	19398564	19398565	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19398565	19398566	1	G	core_nonrep	8	1	1
Rue3-1-31	5	19399677	19399678	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	19403447	19403448	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19405411	19405412	1	A	core_nonrep	10	1	1
Rue3-1-31	5	19407157	19407158	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19407183	19407184	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19407698	19407699	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19407764	19407765	1	G	core_nonrep	7	0.777778	1
Rue3-1-31	5	19407766	19407767	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	19409571	19409572	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19410395	19410396	1	G	core_nonrep	4	1	1
Rue3-1-31	5	19411675	19411676	1	T	core_nonrep	11	1	1
Rue3-1-31	5	19548203	19548204	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19553096	19553097	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19554499	19554500	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19558257	19558258	1	G	core_nonrep	4	0.75	1
Rue3-1-31	5	19559683	19559684	1	A	nonrep	5	0.714286	1
Rue3-1-31	5	19564229	19564230	1	G	core_nonrep	14	0.909091	1
Rue3-1-31	5	19566993	19566994	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19567346	19567347	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	19569331	19569332	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19572673	19572674	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	19572840	19572841	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19582969	19582970	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	19583651	19583652	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19585674	19585675	2	TT	core_nonrep	4	1	1
Rue3-1-31	5	19585676	19585677	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19587319	19587320	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19590314	19590315	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19590450	19590451	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19607364	19607365	1	T	core_nonrep	20	0.9375	1
Rue3-1-31	5	19626002	19626003	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	19640600	19640601	1	T	core_nonrep	15	1	1
Rue3-1-31	5	19641557	19641558	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19642342	19642343	1	G	core_nonrep	4	1	1
Rue3-1-31	5	19642866	19642867	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	19643234	19643235	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19643298	19643299	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	19643782	19643783	3	ATG	core_nonrep	7	0.777778	1
Rue3-1-31	5	19644134	19644135	1	A	core_nonrep	14	1	1
Rue3-1-31	5	19644948	19644949	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19647105	19647106	1	G	core_nonrep	14	0.923077	1
Rue3-1-31	5	19653615	19653616	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19656605	19656606	1	A	core_nonrep	8	1	1
Rue3-1-31	5	19656722	19656723	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19657007	19657008	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19670063	19670064	1	C	core_nonrep	3	1	1
Rue3-1-31	5	19670264	19670265	2	AG	core_nonrep	4	1	1
Rue3-1-31	5	19673641	19673642	1	T	core_nonrep	10	1	1
Rue3-1-31	5	19674372	19674373	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19678959	19678960	1	A	core_nonrep	14	0.818182	1
Rue3-1-31	5	19679613	19679614	1	T	core_nonrep	9	0.727273	1
Rue3-1-31	5	19680156	19680157	1	T	core_nonrep	10	0.818182	1
Rue3-1-31	5	19680869	19680870	1	C	core_nonrep	9	1	1
Rue3-1-31	5	19680890	19680891	1	G	nonrep	3	0.75	1
Rue3-1-31	5	19681574	19681575	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	19682000	19682001	1	T	core_nonrep	8	1	1
Rue3-1-31	5	19682145	19682146	1	G	core_nonrep	10	1	1
Rue3-1-31	5	19684415	19684416	1	A	core_nonrep	22	0.85	1
Rue3-1-31	5	19684621	19684622	1	G	core_nonrep	6	1	1
Rue3-1-31	5	19686097	19686098	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19687757	19687758	1	G	nonrep	3	1	1
Rue3-1-31	5	19690399	19690400	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	19705573	19705574	1	T	nonrep	3	0.75	1
Rue3-1-31	5	19706175	19706176	1	G	core_nonrep	10	1	1
Rue3-1-31	5	19706640	19706641	3	GGG	nonrep	3	1	1
Rue3-1-31	5	19707696	19707697	1	T	nonrep	3	1	1
Rue3-1-31	5	19710229	19710230	1	T	core_nonrep	11	0.888889	1
Rue3-1-31	5	19713766	19713767	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	5	19714309	19714310	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19714800	19714801	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19718134	19718135	1	T	core_nonrep	6	1	1
Rue3-1-31	5	19719316	19719317	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	19719873	19719874	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19719874	19719875	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19728507	19728508	1	T	core_nonrep	14	0.916667	1
Rue3-1-31	5	19728660	19728661	1	T	core_nonrep	10	1	1
Rue3-1-31	5	19729583	19729584	1	G	core_nonrep	9	1	1
Rue3-1-31	5	19735998	19735999	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	19736097	19736098	1	T	core_nonrep	7	0.833333	1.11111
Rue3-1-31	5	19736207	19736208	1	T	core_nonrep	6	0.857143	1.11111
Rue3-1-31	5	19740613	19740614	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	19740804	19740805	1	A	core_nonrep	13	1	1
Rue3-1-31	5	19741366	19741367	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19741825	19741826	1	A	core_nonrep	8	0.8	1
Rue3-1-31	5	19742998	19742999	1	C	core_nonrep	6	0.857143	1
Rue3-1-31	5	19743001	19743002	1	A	core_nonrep	7	0.714286	1
Rue3-1-31	5	19749481	19749482	2	AA	core_nonrep	7	0.857143	1
Rue3-1-31	5	19750247	19750248	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	19750366	19750367	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19751187	19751188	1	C	core_nonrep	3	1	1
Rue3-1-31	5	19751188	19751189	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19752367	19752368	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	19752765	19752766	1	A	core_nonrep	10	1	1
Rue3-1-31	5	19762939	19762940	1	A	core_nonrep	3	1	1
Rue3-1-31	5	19764192	19764193	1	T	core_nonrep	3	1	1
Rue3-1-31	5	19764383	19764384	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19765198	19765199	3	AAG	core_nonrep	4	1	1
Rue3-1-31	5	19766497	19766498	2	AT	core_nonrep	8	0.875	1
Rue3-1-31	5	19766819	19766820	1	A	core_nonrep	9	1	1
Rue3-1-31	5	19772444	19772445	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19773823	19773824	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19775216	19775217	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19776096	19776097	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19783499	19783500	1	G	core_nonrep	17	1	1
Rue3-1-31	5	19785839	19785840	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	19786637	19786638	2	GT	core_nonrep	4	0.75	1
Rue3-1-31	5	19787022	19787023	1	A	core_nonrep	5	1	1
Rue3-1-31	5	19788092	19788093	2	AG	core_nonrep	8	0.875	1
Rue3-1-31	5	19798282	19798283	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	19799119	19799120	1	A	core_nonrep	8	1	1
Rue3-1-31	5	19809508	19809509	1	T	core_nonrep	7	1	1
Rue3-1-31	5	19811008	19811009	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	19814021	19814022	1	T	nonrep	3	1	1
Rue3-1-31	5	19815224	19815225	1	G	core_nonrep	8	1	1
Rue3-1-31	5	19815625	19815626	1	A	nonrep	3	1	1
Rue3-1-31	5	19815626	19815627	1	A	nonrep	3	1	1
Rue3-1-31	5	19816776	19816777	1	G	nonrep	3	0.75	1.4
Rue3-1-31	5	19841239	19841240	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19854879	19854880	1	A	core_nonrep	11	0.846154	1
Rue3-1-31	5	19864037	19864038	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	19866274	19866275	1	A	core_nonrep	7	1	1
Rue3-1-31	5	19870658	19870659	1	A	core_nonrep	6	1	1
Rue3-1-31	5	19879418	19879419	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	19920666	19920667	1	T	core_nonrep	5	1	1
Rue3-1-31	5	19961219	19961220	1	A	core_nonrep	10	0.727273	1
Rue3-1-31	5	19966478	19966479	1	T	core_nonrep	4	1	1
Rue3-1-31	5	19966770	19966771	2	AG	core_nonrep	5	1	1
Rue3-1-31	5	19970075	19970076	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19972442	19972443	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	19973603	19973604	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	19979000	19979001	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	19980863	19980864	1	C	core_nonrep	5	1	1
Rue3-1-31	5	19985983	19985984	1	A	core_nonrep	4	1	1
Rue3-1-31	5	19986344	19986345	1	A	core_nonrep	11	1	1
Rue3-1-31	5	19995520	19995521	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	19996988	19996989	2	TT	core_nonrep	9	0.888889	1
Rue3-1-31	5	19996989	19996990	1	C	core_nonrep	9	1	1
Rue3-1-31	5	20002063	20002064	1	A	core_nonrep	12	0.846154	1
Rue3-1-31	5	20003867	20003868	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	20007971	20007972	1	A	core_nonrep	8	0.7	1
Rue3-1-31	5	20008922	20008923	1	T	nonrep	3	0.75	1
Rue3-1-31	5	20009638	20009639	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20011812	20011813	1	G	core_nonrep	4	1	1
Rue3-1-31	5	20014330	20014331	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20014331	20014332	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20014332	20014333	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20031887	20031888	1	A	core_nonrep	5	1	1
Rue3-1-31	5	20040649	20040650	1	G	core_nonrep	5	1	1
Rue3-1-31	5	20043369	20043370	1	T	core_nonrep	10	1	1
Rue3-1-31	5	20048286	20048287	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	20048332	20048333	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20050736	20050737	1	A	core_nonrep	12	0.75	1
Rue3-1-31	5	20063551	20063552	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20064991	20064992	2	AC	core_nonrep	4	1	1
Rue3-1-31	5	20068884	20068885	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	20068968	20068969	1	T	core_nonrep	5	1	1
Rue3-1-31	5	20075466	20075467	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	20076805	20076806	1	T	nonrep	3	1	1
Rue3-1-31	5	20088533	20088534	1	T	core_nonrep	5	1	1
Rue3-1-31	5	20088769	20088770	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	20089224	20089225	1	T	core_nonrep	9	0.75	1
Rue3-1-31	5	20091428	20091429	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20091654	20091655	1	G	core_nonrep	3	1	1
Rue3-1-31	5	20094541	20094542	1	C	core_nonrep	3	1	1
Rue3-1-31	5	20097196	20097197	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20097197	20097198	1	G	core_nonrep	8	1	1
Rue3-1-31	5	20101095	20101096	1	G	nonrep	5	0.714286	1
Rue3-1-31	5	20101761	20101762	1	G	core_nonrep	6	1	1
Rue3-1-31	5	20120879	20120880	1	A	core_nonrep	10	0.857143	1
Rue3-1-31	5	20121771	20121772	1	A	core_nonrep	8	0.75	1
Rue3-1-31	5	20121772	20121773	1	T	core_nonrep	9	0.875	1
Rue3-1-31	5	20122138	20122139	1	C	core_nonrep	6	1	1
Rue3-1-31	5	20122201	20122202	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20122266	20122267	1	A	core_nonrep	6	1	1
Rue3-1-31	5	20122719	20122720	1	A	core_nonrep	10	1	1
Rue3-1-31	5	20122966	20122967	1	A	core_nonrep	4	1	1
Rue3-1-31	5	20123582	20123583	1	A	core_nonrep	7	0.75	1
Rue3-1-31	5	20127067	20127068	1	T	core_nonrep	6	1	1
Rue3-1-31	5	20128124	20128125	1	T	core_nonrep	10	0.875	1
Rue3-1-31	5	20131184	20131185	1	G	core_nonrep	8	1	1
Rue3-1-31	5	20134156	20134157	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20135631	20135632	1	A	nonrep	3	1	1
Rue3-1-31	5	20137315	20137316	1	A	nonrep	3	1	1
Rue3-1-31	5	20148595	20148596	1	T	core_nonrep	6	1	1
Rue3-1-31	5	20151925	20151926	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	20152382	20152383	1	C	core_nonrep	4	1	1
Rue3-1-31	5	20155533	20155534	1	A	core_nonrep	6	0.8	1
Rue3-1-31	5	20161173	20161174	1	A	core_nonrep	6	1	1
Rue3-1-31	5	20161503	20161504	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	20167326	20167327	1	G	core_nonrep	5	1	1.16667
Rue3-1-31	5	20169671	20169672	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	5	20187922	20187923	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	20191881	20191882	1	G	core_nonrep	4	1	1
Rue3-1-31	5	20193005	20193006	1	G	core_nonrep	7	1	1
Rue3-1-31	5	20206340	20206341	3	TTA	core_nonrep	6	1	1
Rue3-1-31	5	20211675	20211676	1	G	core_nonrep	7	0.75	1
Rue3-1-31	5	20225077	20225078	1	A	core_nonrep	8	0.7	1
Rue3-1-31	5	20227669	20227670	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20228781	20228782	1	G	core_nonrep	9	1	1
Rue3-1-31	5	20230246	20230247	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	20232329	20232330	1	A	core_nonrep	8	1	1
Rue3-1-31	5	20239086	20239087	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	20244524	20244525	1	T	core_nonrep	5	1	1
Rue3-1-31	5	20245492	20245493	1	T	core_nonrep	8	1	1
Rue3-1-31	5	20251555	20251556	2	AA	core_nonrep	4	0.8	1
Rue3-1-31	5	20252748	20252749	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	20253296	20253297	1	A	core_nonrep	12	0.9	1
Rue3-1-31	5	20253824	20253825	2	CT	core_nonrep	4	1	1
Rue3-1-31	5	20255279	20255280	2	TT	core_nonrep	7	1	1
Rue3-1-31	5	20256426	20256427	1	T	core_nonrep	6	1	1
Rue3-1-31	5	20256605	20256606	1	T	core_nonrep	8	0.777778	1
Rue3-1-31	5	20257429	20257430	1	A	core_nonrep	4	1	1
Rue3-1-31	5	20259971	20259972	1	A	core_nonrep	9	1	1
Rue3-1-31	5	20260259	20260260	1	T	core_nonrep	15	1	1
Rue3-1-31	5	20263783	20263784	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20270909	20270910	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	20273160	20273161	1	T	core_nonrep	8	1	1
Rue3-1-31	5	20273761	20273762	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	20273762	20273763	2	TG	core_nonrep	6	1	1
Rue3-1-31	5	20273829	20273830	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	20273831	20273832	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	5	20274709	20274710	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	5	20278701	20278702	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	20279623	20279624	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20279624	20279625	1	T	core_nonrep	3	1	1
Rue3-1-31	5	20279802	20279803	1	T	core_nonrep	3	0.75	1.55556
Rue3-1-31	5	20279803	20279804	2	GA	core_nonrep	3	1	1.55556
Rue3-1-31	5	20280000	20280001	1	C	nonrep	3	0.75	1
Rue3-1-31	5	20290363	20290364	1	A	core_nonrep	5	1	1
Rue3-1-31	5	20299947	20299948	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20300240	20300241	1	T	core_nonrep	13	0.909091	1
Rue3-1-31	5	20300908	20300909	2	CC	core_nonrep	5	1	1
Rue3-1-31	5	20300909	20300910	1	G	core_nonrep	5	1	1
Rue3-1-31	5	20301824	20301825	2	GC	core_nonrep	9	0.888889	1
Rue3-1-31	5	20302259	20302260	1	C	core_nonrep	11	1	1
Rue3-1-31	5	20303342	20303343	1	A	core_nonrep	9	1	1
Rue3-1-31	5	20308005	20308006	2	AA	core_nonrep	6	0.8	1
Rue3-1-31	5	20309539	20309540	1	G	core_nonrep	6	0.857143	1.125
Rue3-1-31	5	20311096	20311097	2	TA	core_nonrep	6	1	1
Rue3-1-31	5	20311103	20311104	1	G	core_nonrep	7	1	1
Rue3-1-31	5	20311334	20311335	1	C	core_nonrep	5	1	1
Rue3-1-31	5	20313429	20313430	1	G	core_nonrep	6	0.833333	1
Rue3-1-31	5	20314203	20314204	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20317979	20317980	1	T	core_nonrep	5	1	1
Rue3-1-31	5	20330795	20330796	1	G	core_nonrep	8	1	1
Rue3-1-31	5	20334500	20334501	2	TA	core_nonrep	7	1	1
Rue3-1-31	5	20345648	20345649	1	T	core_nonrep	6	0.714286	1
Rue3-1-31	5	20345649	20345650	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	20350356	20350357	1	A	core_nonrep	9	1	1
Rue3-1-31	5	20350553	20350554	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	20353885	20353886	1	T	core_nonrep	3	1	1
Rue3-1-31	5	20355082	20355083	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	5	20368518	20368519	1	G	core_nonrep	3	1	1
Rue3-1-31	5	20373311	20373312	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	20376670	20376671	1	T	nonrep	4	1	1
Rue3-1-31	5	20393603	20393604	3	TTC	core_nonrep	12	1	1
Rue3-1-31	5	20420746	20420747	1	T	core_nonrep	3	1	1
Rue3-1-31	5	20421824	20421825	1	T	core_nonrep	4	1	1
Rue3-1-31	5	20430191	20430192	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	20436026	20436027	1	G	core_nonrep	6	1	1
Rue3-1-31	5	20436581	20436582	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	20438776	20438777	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20442112	20442113	3	TGG	core_nonrep	3	1	1
Rue3-1-31	5	20443180	20443181	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	20449525	20449526	1	A	core_nonrep	6	1	1
Rue3-1-31	5	20456058	20456059	1	C	core_nonrep	6	0.75	1
Rue3-1-31	5	20459877	20459878	1	A	nonrep	4	1	1
Rue3-1-31	5	20468730	20468731	1	C	core_nonrep	16	1	1
Rue3-1-31	5	20468731	20468732	1	C	core_nonrep	16	0.928571	1
Rue3-1-31	5	20471248	20471249	1	C	core_nonrep	5	0.75	1
Rue3-1-31	5	20476432	20476433	1	A	core_nonrep	8	1	1
Rue3-1-31	5	20488806	20488807	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20500161	20500162	1	A	core_nonrep	9	1	1
Rue3-1-31	5	20502143	20502144	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	20507725	20507726	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20509196	20509197	2	GT	core_nonrep	8	1	1
Rue3-1-31	5	20509276	20509277	1	T	core_nonrep	6	1	1
Rue3-1-31	5	20509419	20509420	1	C	core_nonrep	4	1	1
Rue3-1-31	5	20509638	20509639	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	20510566	20510567	1	C	core_nonrep	9	0.888889	1
Rue3-1-31	5	20517224	20517225	2	AT	core_nonrep	5	0.8	1
Rue3-1-31	5	20517849	20517850	1	A	core_nonrep	11	0.909091	1
Rue3-1-31	5	20517915	20517916	1	C	core_nonrep	9	1	1
Rue3-1-31	5	20532010	20532011	2	GT	nonrep	3	1	1
Rue3-1-31	5	20545260	20545261	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	20556519	20556520	2	TT	core_nonrep	4	0.75	1
Rue3-1-31	5	20558792	20558793	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20559030	20559031	1	C	core_nonrep	4	1	1
Rue3-1-31	5	20564344	20564345	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20565114	20565115	1	T	core_nonrep	10	1	1
Rue3-1-31	5	20568730	20568731	1	C	core_nonrep	12	1	1
Rue3-1-31	5	20571652	20571653	1	T	nonrep	3	0.75	1
Rue3-1-31	5	20580622	20580623	1	A	nonrep	4	0.8	1
Rue3-1-31	5	20650319	20650320	1	A	nonrep	3	0.75	1
Rue3-1-31	5	20650519	20650520	2	CA	core_nonrep	4	1	1
Rue3-1-31	5	20655525	20655526	1	T	core_nonrep	6	1	1
Rue3-1-31	5	20655971	20655972	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	20656756	20656757	1	C	core_nonrep	3	1	1
Rue3-1-31	5	20686173	20686174	1	A	nonrep	3	1	1
Rue3-1-31	5	20689626	20689627	1	T	nonrep	3	0.75	1
Rue3-1-31	5	20693604	20693605	2	TT	core_nonrep	8	0.75	1
Rue3-1-31	5	20694384	20694385	2	AG	core_nonrep	5	1	1
Rue3-1-31	5	20706001	20706002	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	20724968	20724969	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	20743948	20743949	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20744597	20744598	1	G	nonrep	4	1	1
Rue3-1-31	5	20746250	20746251	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20749577	20749578	1	T	core_nonrep	7	1	1
Rue3-1-31	5	20751546	20751547	1	T	core_nonrep	13	0.928571	1
Rue3-1-31	5	20761247	20761248	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20766918	20766919	1	T	core_nonrep	5	1	1
Rue3-1-31	5	20774319	20774320	1	T	core_nonrep	4	1	1
Rue3-1-31	5	20776147	20776148	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20786461	20786462	1	A	core_nonrep	5	1	1
Rue3-1-31	5	20788432	20788433	1	A	core_nonrep	4	1	1
Rue3-1-31	5	20788993	20788994	2	GG	core_nonrep	3	1	1
Rue3-1-31	5	20789279	20789280	1	C	core_nonrep	4	1	1
Rue3-1-31	5	20793652	20793653	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	20793835	20793836	1	A	nonrep	3	0.75	1.4
Rue3-1-31	5	20794001	20794002	1	A	core_nonrep	6	1	1
Rue3-1-31	5	20796771	20796772	1	T	core_nonrep	9	1	1
Rue3-1-31	5	20815016	20815017	1	T	core_nonrep	8	1	1
Rue3-1-31	5	20815025	20815026	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	20837213	20837214	2	CT	core_nonrep	9	0.9	1
Rue3-1-31	5	20840797	20840798	1	C	core_nonrep	8	1	1
Rue3-1-31	5	20847935	20847936	1	T	core_nonrep	12	0.769231	1
Rue3-1-31	5	20847936	20847937	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	5	20874059	20874060	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	20875343	20875344	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	20875438	20875439	1	A	core_nonrep	7	1	1
Rue3-1-31	5	20879195	20879196	2	AA	core_nonrep	8	0.727273	1
Rue3-1-31	5	20880462	20880463	1	G	core_nonrep	11	0.818182	1
Rue3-1-31	5	20895949	20895950	2	AT	core_nonrep	5	0.8	1
Rue3-1-31	5	20921235	20921236	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	5	20921405	20921406	1	A	core_nonrep	11	0.9	1
Rue3-1-31	5	20921924	20921925	1	T	core_nonrep	3	1	1
Rue3-1-31	5	20922358	20922359	1	A	core_nonrep	4	1	1
Rue3-1-31	5	20941875	20941876	1	C	core_nonrep	3	1	1
Rue3-1-31	5	20942337	20942338	1	G	core_nonrep	8	1	1
Rue3-1-31	5	20942895	20942896	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	20959544	20959545	1	A	core_nonrep	6	0.714286	1
Rue3-1-31	5	20960093	20960094	1	A	core_nonrep	3	1	1
Rue3-1-31	5	20976598	20976599	1	T	core_nonrep	3	1	1
Rue3-1-31	5	20976689	20976690	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	20978265	20978266	1	A	core_nonrep	9	0.714286	1
Rue3-1-31	5	20979130	20979131	3	TGA	core_nonrep	5	1	1
Rue3-1-31	5	20982061	20982062	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	20982778	20982779	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	20999053	20999054	2	TG	core_nonrep	10	1	1
Rue3-1-31	5	21007699	21007700	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21007946	21007947	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	21007954	21007955	1	C	core_nonrep	5	1	1
Rue3-1-31	5	21017532	21017533	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21022909	21022910	1	T	core_nonrep	6	1	1
Rue3-1-31	5	21028181	21028182	1	T	core_nonrep	14	0.909091	1
Rue3-1-31	5	21028861	21028862	1	C	core_nonrep	9	1	1
Rue3-1-31	5	21032263	21032264	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21042219	21042220	1	T	core_nonrep	7	1	1
Rue3-1-31	5	21045530	21045531	1	A	core_nonrep	3	1	1.25
Rue3-1-31	5	21047286	21047287	1	C	core_nonrep	5	1	1
Rue3-1-31	5	21059231	21059232	1	G	core_nonrep	4	1	1
Rue3-1-31	5	21059303	21059304	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21060976	21060977	3	TTA	core_nonrep	8	0.875	1.1
Rue3-1-31	5	21066987	21066988	3	GAA	core_nonrep	7	0.875	1
Rue3-1-31	5	21077485	21077486	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	21077487	21077488	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	21079221	21079222	1	C	core_nonrep	9	0.7	1
Rue3-1-31	5	21079222	21079223	1	T	core_nonrep	13	0.75	1
Rue3-1-31	5	21079940	21079941	1	T	core_nonrep	7	1	1
Rue3-1-31	5	21081027	21081028	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	21082165	21082166	1	A	core_nonrep	6	1	1
Rue3-1-31	5	21082166	21082167	1	G	core_nonrep	6	1	1
Rue3-1-31	5	21084414	21084415	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	21084421	21084422	1	G	core_nonrep	6	1	1
Rue3-1-31	5	21085331	21085332	2	TT	core_nonrep	6	0.857143	1
Rue3-1-31	5	21086697	21086698	1	A	core_nonrep	9	0.857143	1
Rue3-1-31	5	21095573	21095574	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	21099374	21099375	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21104467	21104468	1	T	core_nonrep	5	1	1
Rue3-1-31	5	21105496	21105497	1	G	core_nonrep	7	1	1
Rue3-1-31	5	21116167	21116168	1	T	core_nonrep	12	1	1
Rue3-1-31	5	21123069	21123070	1	T	core_nonrep	9	1	1
Rue3-1-31	5	21124051	21124052	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21124835	21124836	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	5	21142176	21142177	1	G	core_nonrep	9	1	1
Rue3-1-31	5	21142860	21142861	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	21144676	21144677	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	21147879	21147880	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	21149288	21149289	1	T	core_nonrep	10	1	1
Rue3-1-31	5	21150903	21150904	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	21153551	21153552	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21154995	21154996	1	A	core_nonrep	7	1	1
Rue3-1-31	5	21157850	21157851	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21162770	21162771	1	T	core_nonrep	7	1	1
Rue3-1-31	5	21167623	21167624	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	21168157	21168158	2	TA	core_nonrep	5	1	1
Rue3-1-31	5	21168718	21168719	1	A	nonrep	4	0.8	1
Rue3-1-31	5	21169591	21169592	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21170322	21170323	1	A	core_nonrep	12	1	1
Rue3-1-31	5	21171194	21171195	1	C	core_nonrep	7	1	1
Rue3-1-31	5	21177578	21177579	1	T	core_nonrep	17	1	1
Rue3-1-31	5	21178093	21178094	1	T	nonrep	3	1	1
Rue3-1-31	5	21178879	21178880	1	G	nonrep	6	0.857143	1
Rue3-1-31	5	21183455	21183456	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	21192773	21192774	1	C	core_nonrep	5	0.75	1
Rue3-1-31	5	21203485	21203486	1	G	core_nonrep	10	1	1
Rue3-1-31	5	21204921	21204922	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	21206248	21206249	1	C	core_nonrep	10	0.875	1
Rue3-1-31	5	21229846	21229847	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	5	21237797	21237798	1	A	core_nonrep	9	1	1
Rue3-1-31	5	21240581	21240582	1	A	core_nonrep	11	1	1
Rue3-1-31	5	21240685	21240686	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21240979	21240980	1	A	core_nonrep	9	1	1
Rue3-1-31	5	21241750	21241751	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	21242502	21242503	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21257349	21257350	1	G	core_nonrep	3	1	1
Rue3-1-31	5	21261197	21261198	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21264037	21264038	1	T	core_nonrep	9	1	1
Rue3-1-31	5	21285960	21285961	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21306579	21306580	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	21320077	21320078	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	21321300	21321301	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	21323387	21323388	1	A	core_nonrep	7	1	1
Rue3-1-31	5	21342246	21342247	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	21347254	21347255	1	A	core_nonrep	8	0.7	1
Rue3-1-31	5	21354744	21354745	3	ATC	core_nonrep	8	0.75	1
Rue3-1-31	5	21367464	21367465	1	T	core_nonrep	16	1	1
Rue3-1-31	5	21367465	21367466	1	A	core_nonrep	17	1	1
Rue3-1-31	5	21373540	21373541	1	C	core_nonrep	11	0.733333	1
Rue3-1-31	5	21381940	21381941	1	G	core_nonrep	6	0.8	1
Rue3-1-31	5	21381941	21381942	1	T	core_nonrep	6	1	1
Rue3-1-31	5	21382303	21382304	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	21382613	21382614	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21384228	21384229	1	A	nonrep	3	0.75	1
Rue3-1-31	5	21386343	21386344	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21386502	21386503	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21389137	21389138	1	C	core_nonrep	16	0.923077	1
Rue3-1-31	5	21397616	21397617	1	G	core_nonrep	5	1	1
Rue3-1-31	5	21401343	21401344	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21407965	21407966	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	21418307	21418308	1	T	nonrep	3	0.75	1
Rue3-1-31	5	21422192	21422193	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	21427077	21427078	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21427501	21427502	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21428005	21428006	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21430539	21430540	1	A	nonrep	3	1	1
Rue3-1-31	5	21435468	21435469	2	GG	core_nonrep	9	0.75	1
Rue3-1-31	5	21438926	21438927	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21440772	21440773	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	21441293	21441294	2	AG	nonrep	3	0.75	1
Rue3-1-31	5	21441632	21441633	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21443087	21443088	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21451573	21451574	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	21459500	21459501	1	G	core_nonrep	7	0.833333	1
Rue3-1-31	5	21466156	21466157	1	A	core_nonrep	9	1	1
Rue3-1-31	5	21466158	21466159	1	C	core_nonrep	9	1	1
Rue3-1-31	5	21474543	21474544	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21488118	21488119	1	C	core_nonrep	29	0.954545	1.02703
Rue3-1-31	5	21493070	21493071	3	CCT	core_nonrep	8	0.8	1
Rue3-1-31	5	21501172	21501173	1	G	core_nonrep	8	1	1
Rue3-1-31	5	21504700	21504701	2	TA	core_nonrep	7	1	1
Rue3-1-31	5	21515829	21515830	2	AA	core_nonrep	6	1	1
Rue3-1-31	5	21518743	21518744	1	C	nonrep	5	0.714286	1
Rue3-1-31	5	21520355	21520356	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	21521977	21521978	1	T	core_nonrep	6	1	1
Rue3-1-31	5	21524416	21524417	1	C	core_nonrep	5	1	1
Rue3-1-31	5	21529485	21529486	2	CT	core_nonrep	3	1	1
Rue3-1-31	5	21530221	21530222	1	A	core_nonrep	10	1	1
Rue3-1-31	5	21530756	21530757	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	5	21530757	21530758	1	G	core_nonrep	7	0.875	1
Rue3-1-31	5	21532122	21532123	1	C	core_nonrep	8	0.833333	1
Rue3-1-31	5	21543291	21543292	2	AG	core_nonrep	8	0.857143	1
Rue3-1-31	5	21569505	21569506	1	C	core_nonrep	9	0.9	1
Rue3-1-31	5	21569506	21569507	1	T	core_nonrep	9	1	1
Rue3-1-31	5	21570738	21570739	2	TT	core_nonrep	6	0.75	1
Rue3-1-31	5	21570739	21570740	1	C	core_nonrep	6	0.75	1
Rue3-1-31	5	21575339	21575340	1	T	nonrep	7	0.777778	1
Rue3-1-31	5	21579782	21579783	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	21589911	21589912	1	A	core_nonrep	7	1	1
Rue3-1-31	5	21590019	21590020	1	A	nonrep	4	0.8	1
Rue3-1-31	5	21591981	21591982	2	TA	core_nonrep	4	0.75	1
Rue3-1-31	5	21594544	21594545	2	TC	core_nonrep	11	0.846154	1
Rue3-1-31	5	21598688	21598689	1	T	core_nonrep	8	0.75	1
Rue3-1-31	5	21606186	21606187	1	T	core_nonrep	5	1	1
Rue3-1-31	5	21606187	21606188	1	C	core_nonrep	5	1	1
Rue3-1-31	5	21615013	21615014	1	A	core_nonrep	10	0.818182	1
Rue3-1-31	5	21617571	21617572	3	TGT	core_nonrep	3	1	1
Rue3-1-31	5	21618450	21618451	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	21619921	21619922	1	C	core_nonrep	6	1	1
Rue3-1-31	5	21620856	21620857	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21624284	21624285	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21625250	21625251	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21625274	21625275	1	T	core_nonrep	5	1	1
Rue3-1-31	5	21625732	21625733	2	TC	core_nonrep	6	1	1
Rue3-1-31	5	21626371	21626372	1	A	core_nonrep	6	1	1
Rue3-1-31	5	21627718	21627719	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	5	21627851	21627852	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21649548	21649549	2	AT	core_nonrep	6	1	1
Rue3-1-31	5	21690077	21690078	1	A	nonrep	3	0.75	1
Rue3-1-31	5	21690624	21690625	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21693964	21693965	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	21699204	21699205	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21710227	21710228	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21710305	21710306	2	AG	core_nonrep	3	1	1
Rue3-1-31	5	21715708	21715709	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21722760	21722761	1	T	core_nonrep	7	1	1
Rue3-1-31	5	21747574	21747575	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21753411	21753412	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21756618	21756619	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	21756899	21756900	2	AA	core_nonrep	7	0.777778	1
Rue3-1-31	5	21759841	21759842	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21764449	21764450	1	T	core_nonrep	11	1	1
Rue3-1-31	5	21766266	21766267	1	C	core_nonrep	16	0.764706	1
Rue3-1-31	5	21774511	21774512	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	21776153	21776154	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21776589	21776590	1	C	core_nonrep	9	1	1
Rue3-1-31	5	21780676	21780677	1	T	core_nonrep	7	1	1
Rue3-1-31	5	21782051	21782052	1	A	core_nonrep	6	1	1
Rue3-1-31	5	21789325	21789326	1	C	core_nonrep	9	1	1
Rue3-1-31	5	21791129	21791130	1	T	core_nonrep	4	0.8	1.14286
Rue3-1-31	5	21794291	21794292	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21795305	21795306	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21802293	21802294	1	A	core_nonrep	9	0.875	1
Rue3-1-31	5	21855705	21855706	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	21865047	21865048	1	A	nonrep	3	1	1
Rue3-1-31	5	21871149	21871150	1	T	core_nonrep	3	1	1
Rue3-1-31	5	21871490	21871491	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	21874237	21874238	2	CA	core_nonrep	9	0.75	1
Rue3-1-31	5	21875325	21875326	1	G	core_nonrep	5	1	1
Rue3-1-31	5	21875756	21875757	1	G	core_nonrep	5	1	1
Rue3-1-31	5	21876009	21876010	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21876303	21876304	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21886147	21886148	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	21887009	21887010	1	A	core_nonrep	9	0.777778	1
Rue3-1-31	5	21891031	21891032	1	T	core_nonrep	6	0.8	1
Rue3-1-31	5	21893005	21893006	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	21893773	21893774	1	T	core_nonrep	5	1	1
Rue3-1-31	5	21898374	21898375	1	A	core_nonrep	6	1	1
Rue3-1-31	5	21898395	21898396	1	T	core_nonrep	5	1	1
Rue3-1-31	5	21899355	21899356	1	T	core_nonrep	8	1	1
Rue3-1-31	5	21899545	21899546	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	21899710	21899711	1	T	nonrep	4	1	1
Rue3-1-31	5	21899983	21899984	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21901382	21901383	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21903084	21903085	1	A	core_nonrep	3	1	1
Rue3-1-31	5	21903087	21903088	2	TC	core_nonrep	3	1	1
Rue3-1-31	5	21923464	21923465	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21923624	21923625	1	A	core_nonrep	5	1	1
Rue3-1-31	5	21926502	21926503	1	C	core_nonrep	4	0.75	1
Rue3-1-31	5	21926503	21926504	1	T	core_nonrep	4	1	1
Rue3-1-31	5	21926504	21926505	1	A	core_nonrep	4	1	1
Rue3-1-31	5	21941530	21941531	1	T	core_nonrep	9	1	1
Rue3-1-31	5	21943262	21943263	1	A	core_nonrep	8	1	1
Rue3-1-31	5	21944468	21944469	1	T	core_nonrep	9	1	1
Rue3-1-31	5	21945233	21945234	1	A	core_nonrep	8	0.857143	1
Rue3-1-31	5	21956891	21956892	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	21958583	21958584	1	T	core_nonrep	19	0.947368	1
Rue3-1-31	5	21962984	21962985	1	A	nonrep	3	1	1
Rue3-1-31	5	21977145	21977146	2	TT	core_nonrep	11	1	1
Rue3-1-31	5	21977859	21977860	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	21978450	21978451	1	C	core_nonrep	6	1	1
Rue3-1-31	5	21984384	21984385	1	T	core_nonrep	10	1	1
Rue3-1-31	5	21986997	21986998	1	T	core_nonrep	10	1	1
Rue3-1-31	5	21990805	21990806	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	21995369	21995370	2	TT	core_nonrep	5	0.833333	1
Rue3-1-31	5	21997168	21997169	1	A	core_nonrep	9	1	1
Rue3-1-31	5	21998430	21998431	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22008037	22008038	1	T	core_nonrep	6	0.833333	1.27778
Rue3-1-31	5	22018449	22018450	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22025654	22025655	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22027013	22027014	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22042776	22042777	1	C	core_nonrep	3	1	1
Rue3-1-31	5	22079425	22079426	1	G	core_nonrep	11	1	1
Rue3-1-31	5	22103546	22103547	2	TT	core_nonrep	3	1	1
Rue3-1-31	5	22105641	22105642	1	T	nonrep	4	1	1
Rue3-1-31	5	22111322	22111323	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	22127036	22127037	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22152984	22152985	2	TA	core_nonrep	3	0.75	1
Rue3-1-31	5	22179718	22179719	1	T	core_nonrep	5	1	1
Rue3-1-31	5	22211921	22211922	2	AA	core_nonrep	5	0.714286	1
Rue3-1-31	5	22213389	22213390	1	C	core_nonrep	6	0.833333	1
Rue3-1-31	5	22214636	22214637	1	T	core_nonrep	7	1	1
Rue3-1-31	5	22214664	22214665	1	G	core_nonrep	6	1	1
Rue3-1-31	5	22214665	22214666	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	22219407	22219408	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22225399	22225400	1	A	nonrep	4	0.8	1
Rue3-1-31	5	22227672	22227673	1	G	core_nonrep	10	0.909091	1
Rue3-1-31	5	22229696	22229697	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22229751	22229752	1	A	core_nonrep	10	1	1
Rue3-1-31	5	22231236	22231237	1	T	core_nonrep	7	1	1
Rue3-1-31	5	22243991	22243992	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	22261639	22261640	1	G	core_nonrep	5	1	1
Rue3-1-31	5	22262075	22262076	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22262780	22262781	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	22262782	22262783	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	22262783	22262784	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	22262998	22262999	1	G	core_nonrep	6	1	1
Rue3-1-31	5	22265134	22265135	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22265530	22265531	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22265544	22265545	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22265854	22265855	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22266946	22266947	1	G	core_nonrep	10	1	1
Rue3-1-31	5	22268482	22268483	1	C	core_nonrep	5	1	1
Rue3-1-31	5	22269372	22269373	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22272103	22272104	1	T	core_nonrep	5	1	1
Rue3-1-31	5	22278249	22278250	1	A	nonrep	3	1	1
Rue3-1-31	5	22289837	22289838	1	G	core_nonrep	8	0.8	1
Rue3-1-31	5	22299032	22299033	1	G	core_nonrep	11	0.916667	1
Rue3-1-31	5	22300116	22300117	1	A	core_nonrep	10	1	1
Rue3-1-31	5	22305612	22305613	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22315966	22315967	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	22315967	22315968	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	22319272	22319273	2	AT	core_nonrep	5	0.833333	1
Rue3-1-31	5	22327715	22327716	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	22328052	22328053	1	C	core_nonrep	6	1	1
Rue3-1-31	5	22328053	22328054	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22332290	22332291	1	A	core_nonrep	7	1	1
Rue3-1-31	5	22339070	22339071	2	TA	core_nonrep	6	1	1
Rue3-1-31	5	22339315	22339316	1	A	core_nonrep	6	1	1
Rue3-1-31	5	22350676	22350677	1	A	core_nonrep	8	0.777778	1
Rue3-1-31	5	22350811	22350812	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	22351336	22351337	1	T	core_nonrep	7	1	1
Rue3-1-31	5	22357169	22357170	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	22358053	22358054	2	AA	core_nonrep	6	1	1
Rue3-1-31	5	22358302	22358303	2	AT	core_nonrep	9	1	1
Rue3-1-31	5	22358385	22358386	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	22358477	22358478	2	TT	core_nonrep	6	0.714286	1
Rue3-1-31	5	22364929	22364930	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	5	22364971	22364972	2	TT	core_nonrep	7	0.875	1
Rue3-1-31	5	22366731	22366732	1	C	core_nonrep	14	1	1
Rue3-1-31	5	22368472	22368473	2	AT	core_nonrep	5	1	1
Rue3-1-31	5	22369604	22369605	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22384278	22384279	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	22384315	22384316	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22384316	22384317	1	G	core_nonrep	5	1	1
Rue3-1-31	5	22392519	22392520	1	G	core_nonrep	8	1	1
Rue3-1-31	5	22400271	22400272	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	5	22407593	22407594	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22413907	22413908	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22419507	22419508	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	22419560	22419561	1	A	core_nonrep	12	1	1
Rue3-1-31	5	22419639	22419640	1	T	core_nonrep	9	1	1
Rue3-1-31	5	22419785	22419786	1	G	core_nonrep	8	1	1
Rue3-1-31	5	22424178	22424179	1	T	core_nonrep	9	1	1
Rue3-1-31	5	22424412	22424413	1	A	core_nonrep	11	0.692308	1
Rue3-1-31	5	22424689	22424690	1	A	core_nonrep	6	1	1
Rue3-1-31	5	22424690	22424691	2	TT	core_nonrep	6	0.8	1
Rue3-1-31	5	22425392	22425393	1	A	core_nonrep	6	1	1
Rue3-1-31	5	22425435	22425436	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	22425436	22425437	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22425776	22425777	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22427570	22427571	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22430003	22430004	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	22430942	22430943	1	C	core_nonrep	11	1	1
Rue3-1-31	5	22430944	22430945	1	G	core_nonrep	11	1	1
Rue3-1-31	5	22434736	22434737	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	22434737	22434738	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	22454680	22454681	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22472065	22472066	1	G	core_nonrep	7	1	1
Rue3-1-31	5	22472509	22472510	1	G	core_nonrep	8	0.875	1
Rue3-1-31	5	22475060	22475061	1	A	core_nonrep	13	1	1
Rue3-1-31	5	22477540	22477541	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	22498730	22498731	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22498990	22498991	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	22499293	22499294	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22501652	22501653	1	A	core_nonrep	6	1	1
Rue3-1-31	5	22502397	22502398	1	G	core_nonrep	3	1	1
Rue3-1-31	5	22525888	22525889	2	TA	nonrep	5	0.714286	1
Rue3-1-31	5	22546879	22546880	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22564050	22564051	1	A	core_nonrep	8	0.7	1
Rue3-1-31	5	22568111	22568112	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	22575484	22575485	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	22577981	22577982	1	C	core_nonrep	5	1	1
Rue3-1-31	5	22582979	22582980	1	G	core_nonrep	13	0.7	1
Rue3-1-31	5	22584695	22584696	1	T	core_nonrep	7	1	1
Rue3-1-31	5	22597973	22597974	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22602635	22602636	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22603569	22603570	2	AA	core_nonrep	8	0.727273	1
Rue3-1-31	5	22622193	22622194	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22625847	22625848	3	CTT	core_nonrep	3	0.75	1
Rue3-1-31	5	22626472	22626473	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22629530	22629531	1	T	core_nonrep	19	1	1
Rue3-1-31	5	22643146	22643147	1	G	core_nonrep	14	0.8	1
Rue3-1-31	5	22651904	22651905	2	AA	core_nonrep	6	1	1
Rue3-1-31	5	22653275	22653276	1	C	core_nonrep	14	0.916667	1
Rue3-1-31	5	22660837	22660838	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	22662929	22662930	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	22665943	22665944	1	A	core_nonrep	9	1	1
Rue3-1-31	5	22669637	22669638	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22674603	22674604	1	T	core_nonrep	10	1	1
Rue3-1-31	5	22676487	22676488	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	5	22678398	22678399	1	T	core_nonrep	4	1	1
Rue3-1-31	5	22678399	22678400	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22697953	22697954	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22711561	22711562	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22719514	22719515	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	22720323	22720324	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	22722327	22722328	1	G	core_nonrep	3	1	1
Rue3-1-31	5	22723049	22723050	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22725837	22725838	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22733182	22733183	1	C	core_nonrep	9	1	1
Rue3-1-31	5	22735485	22735486	1	A	core_nonrep	5	1	1
Rue3-1-31	5	22739503	22739504	1	A	core_nonrep	10	1	1
Rue3-1-31	5	22740019	22740020	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	22740657	22740658	1	C	core_nonrep	7	1	1
Rue3-1-31	5	22742136	22742137	1	C	core_nonrep	7	1	1
Rue3-1-31	5	22743263	22743264	1	A	core_nonrep	7	1	1
Rue3-1-31	5	22747071	22747072	2	TC	core_nonrep	8	0.875	1
Rue3-1-31	5	22749610	22749611	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22750074	22750075	1	T	core_nonrep	8	1	1
Rue3-1-31	5	22751730	22751731	1	T	core_nonrep	8	1	1
Rue3-1-31	5	22759420	22759421	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	22762148	22762149	1	T	core_nonrep	6	1	1
Rue3-1-31	5	22763874	22763875	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	22775752	22775753	1	A	core_nonrep	12	0.916667	1
Rue3-1-31	5	22782396	22782397	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22784194	22784195	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22784749	22784750	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	22787552	22787553	1	A	core_nonrep	8	1	1
Rue3-1-31	5	22800812	22800813	1	T	core_nonrep	11	0.833333	1
Rue3-1-31	5	22803511	22803512	1	G	nonrep	3	1	1
Rue3-1-31	5	22816137	22816138	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	22821144	22821145	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22822534	22822535	2	AT	core_nonrep	3	0.75	1
Rue3-1-31	5	22830851	22830852	2	TA	core_nonrep	5	0.8	1
Rue3-1-31	5	22831883	22831884	2	GT	core_nonrep	7	1	1
Rue3-1-31	5	22832053	22832054	2	TA	core_nonrep	6	1	1
Rue3-1-31	5	22832911	22832912	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22839809	22839810	1	T	core_nonrep	13	0.923077	1
Rue3-1-31	5	22840510	22840511	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22865121	22865122	2	TA	core_nonrep	5	0.833333	1
Rue3-1-31	5	22874729	22874730	1	G	core_nonrep	4	1	1
Rue3-1-31	5	22879721	22879722	3	TCT	core_nonrep	7	0.777778	1
Rue3-1-31	5	22882895	22882896	1	T	core_nonrep	7	1	1
Rue3-1-31	5	22886975	22886976	1	G	nonrep	4	1	1
Rue3-1-31	5	22905006	22905007	2	TA	core_nonrep	9	0.875	1
Rue3-1-31	5	22910015	22910016	2	TC	core_nonrep	5	1	1
Rue3-1-31	5	22911436	22911437	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	22911706	22911707	1	A	core_nonrep	4	1	1
Rue3-1-31	5	22911735	22911736	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	22913049	22913050	1	G	core_nonrep	5	1	1
Rue3-1-31	5	22913345	22913346	1	A	core_nonrep	3	1	1
Rue3-1-31	5	22913827	22913828	1	T	core_nonrep	5	1	1
Rue3-1-31	5	22914251	22914252	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22914253	22914254	2	CG	core_nonrep	3	1	1
Rue3-1-31	5	22914948	22914949	1	T	core_nonrep	3	1	1
Rue3-1-31	5	22918903	22918904	1	T	core_nonrep	7	0.777778	1
Rue3-1-31	5	22923464	22923465	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	22924307	22924308	2	CA	core_nonrep	6	1	1
Rue3-1-31	5	23010323	23010324	1	C	core_nonrep	4	1	1
Rue3-1-31	5	23017162	23017163	1	A	core_nonrep	8	1	1
Rue3-1-31	5	23020523	23020524	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	23040082	23040083	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	23040428	23040429	3	TTG	core_nonrep	8	1	1
Rue3-1-31	5	23042069	23042070	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23046689	23046690	1	T	core_nonrep	8	1	1
Rue3-1-31	5	23049637	23049638	2	AA	core_nonrep	5	0.833333	1
Rue3-1-31	5	23060736	23060737	1	A	core_nonrep	7	1	1
Rue3-1-31	5	23063856	23063857	1	G	core_nonrep	5	0.833333	1
Rue3-1-31	5	23072386	23072387	1	A	core_nonrep	8	0.875	1
Rue3-1-31	5	23075139	23075140	1	T	nonrep	3	0.75	1
Rue3-1-31	5	23083320	23083321	1	T	core_nonrep	7	1	1
Rue3-1-31	5	23103588	23103589	1	T	core_nonrep	9	0.9	1
Rue3-1-31	5	23104200	23104201	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	23104463	23104464	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23108384	23108385	1	T	core_nonrep	7	1	1
Rue3-1-31	5	23111074	23111075	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	23125980	23125981	1	A	core_nonrep	8	1	1
Rue3-1-31	5	23145595	23145596	1	A	core_nonrep	11	0.818182	1
Rue3-1-31	5	23145887	23145888	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	23157426	23157427	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	23159871	23159872	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	23166926	23166927	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23166928	23166929	1	G	core_nonrep	6	1	1
Rue3-1-31	5	23170269	23170270	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23171224	23171225	1	T	core_nonrep	9	1	1
Rue3-1-31	5	23171454	23171455	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	23184927	23184928	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	23189400	23189401	3	GTG	core_nonrep	4	1	1
Rue3-1-31	5	23203873	23203874	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	23207176	23207177	1	A	nonrep	4	1	1
Rue3-1-31	5	23211430	23211431	1	T	core_nonrep	9	0.8	1
Rue3-1-31	5	23223736	23223737	1	T	core_nonrep	7	0.857143	1
Rue3-1-31	5	23227980	23227981	1	A	core_nonrep	4	1	1
Rue3-1-31	5	23228504	23228505	1	C	core_nonrep	3	1	1
Rue3-1-31	5	23235109	23235110	1	T	core_nonrep	4	1	1
Rue3-1-31	5	23240202	23240203	2	TC	core_nonrep	4	0.8	1
Rue3-1-31	5	23245288	23245289	2	CT	core_nonrep	10	1	1
Rue3-1-31	5	23248334	23248335	1	A	core_nonrep	3	1	1
Rue3-1-31	5	23273714	23273715	2	GA	core_nonrep	6	0.75	1
Rue3-1-31	5	23281768	23281769	1	A	core_nonrep	13	1	1
Rue3-1-31	5	23283560	23283561	1	G	core_nonrep	8	1	1
Rue3-1-31	5	23286393	23286394	1	A	core_nonrep	12	0.875	1
Rue3-1-31	5	23305680	23305681	1	T	core_nonrep	10	0.9	1
Rue3-1-31	5	23311266	23311267	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	23316087	23316088	1	A	nonrep	3	1	1
Rue3-1-31	5	23321700	23321701	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23326509	23326510	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23326511	23326512	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	23328017	23328018	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	23329787	23329788	2	CA	core_nonrep	11	0.818182	1
Rue3-1-31	5	23340125	23340126	1	A	core_nonrep	8	0.8	1
Rue3-1-31	5	23340368	23340369	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	23363867	23363868	1	A	core_nonrep	6	1	1
Rue3-1-31	5	23367597	23367598	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	23374680	23374681	2	AT	core_nonrep	9	1	1
Rue3-1-31	5	23385025	23385026	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	23400257	23400258	1	A	core_nonrep	7	1	1
Rue3-1-31	5	23413105	23413106	1	T	core_nonrep	11	0.8	1
Rue3-1-31	5	23416830	23416831	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23420084	23420085	1	A	core_nonrep	8	0.888889	1
Rue3-1-31	5	23421167	23421168	2	AT	core_nonrep	5	1	1
Rue3-1-31	5	23432430	23432431	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23432775	23432776	1	A	core_nonrep	6	1	1
Rue3-1-31	5	23448189	23448190	1	A	core_nonrep	10	1	1
Rue3-1-31	5	23451344	23451345	1	G	core_nonrep	7	0.8	1
Rue3-1-31	5	23452907	23452908	1	T	core_nonrep	13	0.818182	1
Rue3-1-31	5	23455145	23455146	1	A	core_nonrep	10	1	1
Rue3-1-31	5	23456598	23456599	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	23456599	23456600	2	AA	core_nonrep	9	1	1
Rue3-1-31	5	23463159	23463160	3	AGA	core_nonrep	9	1	1
Rue3-1-31	5	23466687	23466688	1	C	core_nonrep	9	0.692308	1
Rue3-1-31	5	23487116	23487117	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23492922	23492923	1	A	core_nonrep	7	0.8	1
Rue3-1-31	5	23518952	23518953	1	A	core_nonrep	8	1	1
Rue3-1-31	5	23524014	23524015	2	AA	core_nonrep	15	0.933333	1
Rue3-1-31	5	23534395	23534396	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	23534398	23534399	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23588175	23588176	2	AC	core_nonrep	10	0.7	1
Rue3-1-31	5	23601586	23601587	1	A	core_nonrep	10	0.875	1
Rue3-1-31	5	23606432	23606433	1	G	core_nonrep	3	1	1
Rue3-1-31	5	23610078	23610079	1	C	core_nonrep	9	1	1
Rue3-1-31	5	23611785	23611786	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	23612636	23612637	1	A	core_nonrep	7	0.777778	1
Rue3-1-31	5	23670795	23670796	1	G	core_nonrep	9	0.888889	1
Rue3-1-31	5	23674298	23674299	2	AG	core_nonrep	4	1	1
Rue3-1-31	5	23675479	23675480	1	G	core_nonrep	6	0.857143	1
Rue3-1-31	5	23703468	23703469	1	A	core_nonrep	8	1	1
Rue3-1-31	5	23703474	23703475	2	AA	core_nonrep	7	1	1
Rue3-1-31	5	23711173	23711174	1	T	core_nonrep	10	0.9	1
Rue3-1-31	5	23718381	23718382	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23734557	23734558	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	23740557	23740558	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	23744983	23744984	1	T	core_nonrep	6	1	1
Rue3-1-31	5	23745111	23745112	1	A	core_nonrep	5	0.833333	1
Rue3-1-31	5	23751373	23751374	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	23754592	23754593	2	AA	core_nonrep	3	0.75	1
Rue3-1-31	5	23754647	23754648	1	A	nonrep	5	0.833333	1
Rue3-1-31	5	23754692	23754693	1	T	nonrep	3	0.75	1
Rue3-1-31	5	23754771	23754772	1	T	core_nonrep	8	1	1
Rue3-1-31	5	23755457	23755458	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	23761874	23761875	1	C	nonrep	3	0.75	1
Rue3-1-31	5	23764675	23764676	1	T	core_nonrep	4	1	1
Rue3-1-31	5	23766673	23766674	1	G	core_nonrep	12	1	1
Rue3-1-31	5	23772424	23772425	1	C	core_nonrep	7	0.857143	1
Rue3-1-31	5	23772547	23772548	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23780405	23780406	1	G	core_nonrep	5	1	1
Rue3-1-31	5	23785373	23785374	1	T	core_nonrep	6	1	1
Rue3-1-31	5	23786599	23786600	3	TAA	core_nonrep	6	0.833333	1
Rue3-1-31	5	23799946	23799947	1	T	core_nonrep	8	1	1
Rue3-1-31	5	23801415	23801416	1	T	core_nonrep	6	1	1
Rue3-1-31	5	23804249	23804250	1	A	core_nonrep	4	1	1
Rue3-1-31	5	23806738	23806739	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	23821921	23821922	2	TT	core_nonrep	8	0.75	1
Rue3-1-31	5	23823679	23823680	1	A	core_nonrep	3	1	1
Rue3-1-31	5	23832730	23832731	1	T	core_nonrep	10	1	1
Rue3-1-31	5	23834985	23834986	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	23842917	23842918	1	A	core_nonrep	5	0.8	1
Rue3-1-31	5	23848024	23848025	1	T	core_nonrep	7	1	1
Rue3-1-31	5	23849469	23849470	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	23851972	23851973	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23852717	23852718	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23853379	23853380	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	23863134	23863135	1	A	core_nonrep	4	1	1
Rue3-1-31	5	23863181	23863182	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23868157	23868158	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	23868341	23868342	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23868854	23868855	1	C	core_nonrep	4	1	1
Rue3-1-31	5	23868871	23868872	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23869057	23869058	2	AC	core_nonrep	4	1	1
Rue3-1-31	5	23869058	23869059	1	T	core_nonrep	4	1	1
Rue3-1-31	5	23869963	23869964	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	5	23869978	23869979	1	T	core_nonrep	10	0.888889	1
Rue3-1-31	5	23871562	23871563	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	23874097	23874098	1	A	core_nonrep	10	1	1
Rue3-1-31	5	23874315	23874316	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	23878970	23878971	1	A	core_nonrep	3	1	1
Rue3-1-31	5	23880577	23880578	1	A	core_nonrep	7	1	1
Rue3-1-31	5	23881233	23881234	1	G	core_nonrep	4	1	1
Rue3-1-31	5	23881234	23881235	1	A	core_nonrep	4	1	1
Rue3-1-31	5	23885761	23885762	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23893984	23893985	1	G	core_nonrep	6	1	1
Rue3-1-31	5	23896328	23896329	1	G	nonrep	3	1	1
Rue3-1-31	5	23902569	23902570	2	AA	core_nonrep	5	1	1
Rue3-1-31	5	23903218	23903219	1	A	core_nonrep	5	1	1
Rue3-1-31	5	23913934	23913935	1	A	core_nonrep	19	0.85	1
Rue3-1-31	5	23914171	23914172	1	C	core_nonrep	6	0.75	1
Rue3-1-31	5	23943061	23943062	1	T	core_nonrep	8	1	1
Rue3-1-31	5	23944848	23944849	2	TA	core_nonrep	6	1	1
Rue3-1-31	5	23952126	23952127	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	23952236	23952237	1	T	core_nonrep	4	1	1
Rue3-1-31	5	23952279	23952280	1	T	core_nonrep	3	1	1
Rue3-1-31	5	23952434	23952435	2	TA	core_nonrep	3	1	1
Rue3-1-31	5	24149808	24149809	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	24267135	24267136	1	A	core_nonrep	9	1	1
Rue3-1-31	5	24455351	24455352	1	G	core_nonrep	5	1	1
Rue3-1-31	5	24455937	24455938	1	T	core_nonrep	7	1	1
Rue3-1-31	5	24456041	24456042	1	A	core_nonrep	4	1	1
Rue3-1-31	5	24457022	24457023	1	C	core_nonrep	7	0.833333	1
Rue3-1-31	5	24462956	24462957	1	G	core_nonrep	3	1	1
Rue3-1-31	5	24479289	24479290	1	T	core_nonrep	8	0.857143	1
Rue3-1-31	5	24488365	24488366	1	T	core_nonrep	5	1	1
Rue3-1-31	5	24510189	24510190	1	T	core_nonrep	4	1	1
Rue3-1-31	5	24513544	24513545	1	T	core_nonrep	4	1	1
Rue3-1-31	5	24520357	24520358	1	T	core_nonrep	10	1	1
Rue3-1-31	5	24531791	24531792	1	C	nonrep	3	0.75	1
Rue3-1-31	5	24539347	24539348	1	A	core_nonrep	7	1	1
Rue3-1-31	5	24586402	24586403	1	A	core_nonrep	9	0.888889	1
Rue3-1-31	5	24611048	24611049	1	C	core_nonrep	4	1	1
Rue3-1-31	5	24630581	24630582	1	T	core_nonrep	6	1	1
Rue3-1-31	5	24653727	24653728	1	C	core_nonrep	9	1	1
Rue3-1-31	5	24654290	24654291	1	T	core_nonrep	5	1	1
Rue3-1-31	5	24661247	24661248	1	T	nonrep	3	1	1
Rue3-1-31	5	24665040	24665041	1	A	core_nonrep	6	1	1
Rue3-1-31	5	24665694	24665695	1	A	core_nonrep	9	0.8	1
Rue3-1-31	5	24665849	24665850	2	TT	core_nonrep	8	0.875	1
Rue3-1-31	5	24665850	24665851	1	A	core_nonrep	8	1	1
Rue3-1-31	5	24672902	24672903	1	A	core_nonrep	14	1	1
Rue3-1-31	5	24675055	24675056	1	A	core_nonrep	5	1	1
Rue3-1-31	5	24682498	24682499	1	A	nonrep	3	1	1
Rue3-1-31	5	24682691	24682692	1	T	core_nonrep	8	0.75	1
Rue3-1-31	5	24683928	24683929	1	C	core_nonrep	3	0.75	1.16667
Rue3-1-31	5	24683931	24683932	1	C	core_nonrep	3	0.75	1.16667
Rue3-1-31	5	24691195	24691196	1	A	core_nonrep	9	1	1
Rue3-1-31	5	24691865	24691866	1	A	core_nonrep	5	1	1
Rue3-1-31	5	24722051	24722052	1	T	core_nonrep	5	1	1
Rue3-1-31	5	24773924	24773925	1	T	nonrep	3	0.75	1
Rue3-1-31	5	24774246	24774247	3	TTG	core_nonrep	5	1	1
Rue3-1-31	5	24788633	24788634	1	T	core_nonrep	7	1	1
Rue3-1-31	5	24794321	24794322	1	A	core_nonrep	5	1	1
Rue3-1-31	5	24794796	24794797	1	T	nonrep	3	1	1
Rue3-1-31	5	24820276	24820277	3	ATT	core_nonrep	32	0.857143	1
Rue3-1-31	5	24835094	24835095	1	A	core_nonrep	4	1	1
Rue3-1-31	5	24835900	24835901	1	A	nonrep	3	0.75	1
Rue3-1-31	5	24837530	24837531	1	T	core_nonrep	5	1	1
Rue3-1-31	5	24862170	24862171	1	T	core_nonrep	5	0.714286	1.125
Rue3-1-31	5	24863154	24863155	1	C	core_nonrep	6	1	1
Rue3-1-31	5	24868568	24868569	1	A	core_nonrep	10	1	1
Rue3-1-31	5	24915526	24915527	2	TC	core_nonrep	11	0.9	1
Rue3-1-31	5	24917392	24917393	1	T	core_nonrep	16	1	1
Rue3-1-31	5	24920777	24920778	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	24922174	24922175	1	T	core_nonrep	9	1	1
Rue3-1-31	5	24941090	24941091	1	T	core_nonrep	4	1	1
Rue3-1-31	5	24949220	24949221	1	C	nonrep	3	1	1
Rue3-1-31	5	24963712	24963713	2	TG	core_nonrep	5	1	1
Rue3-1-31	5	24964769	24964770	1	A	core_nonrep	3	1	1
Rue3-1-31	5	24970604	24970605	2	CT	core_nonrep	3	1	1
Rue3-1-31	5	24972074	24972075	1	A	core_nonrep	8	1	1
Rue3-1-31	5	24972176	24972177	1	C	core_nonrep	9	1	1
Rue3-1-31	5	24972751	24972752	1	A	core_nonrep	6	0.857143	1
Rue3-1-31	5	24984893	24984894	1	G	core_nonrep	4	1	1
Rue3-1-31	5	24984982	24984983	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	24992289	24992290	1	A	core_nonrep	3	1	1
Rue3-1-31	5	24995734	24995735	1	A	core_nonrep	10	1	1
Rue3-1-31	5	25004997	25004998	2	TT	core_nonrep	5	0.8	1
Rue3-1-31	5	25007392	25007393	2	GA	core_nonrep	7	0.777778	1
Rue3-1-31	5	25007469	25007470	1	G	core_nonrep	4	0.8	1
Rue3-1-31	5	25015525	25015526	1	T	nonrep	3	1	1
Rue3-1-31	5	25016187	25016188	2	TT	core_nonrep	5	0.714286	1
Rue3-1-31	5	25019700	25019701	1	T	core_nonrep	7	0.833333	1
Rue3-1-31	5	25019701	25019702	1	A	core_nonrep	7	1	1
Rue3-1-31	5	25023961	25023962	1	A	nonrep	9	0.692308	1
Rue3-1-31	5	25049579	25049580	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	25049580	25049581	1	A	core_nonrep	9	1	1
Rue3-1-31	5	25053351	25053352	1	T	core_nonrep	5	1	1
Rue3-1-31	5	25054026	25054027	1	T	core_nonrep	7	1	1
Rue3-1-31	5	25056569	25056570	1	T	core_nonrep	6	0.833333	1.22222
Rue3-1-31	5	25078733	25078734	1	C	core_nonrep	33	0.925926	1
Rue3-1-31	5	25086346	25086347	1	T	nonrep	4	1	1
Rue3-1-31	5	25089006	25089007	1	T	core_nonrep	5	1	1
Rue3-1-31	5	25089411	25089412	1	C	core_nonrep	11	1	1
Rue3-1-31	5	25091653	25091654	1	G	core_nonrep	6	1	1
Rue3-1-31	5	25098283	25098284	1	G	core_nonrep	9	1	1
Rue3-1-31	5	25153583	25153584	1	T	nonrep	3	0.75	1
Rue3-1-31	5	25154063	25154064	1	G	core_nonrep	7	1	1
Rue3-1-31	5	25163931	25163932	1	T	core_nonrep	8	1	1
Rue3-1-31	5	25169300	25169301	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	25199929	25199930	3	TTA	core_nonrep	5	0.833333	1
Rue3-1-31	5	25212936	25212937	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	25213271	25213272	1	A	core_nonrep	8	0.75	1
Rue3-1-31	5	25213328	25213329	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	25213329	25213330	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25215093	25215094	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	25219198	25219199	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	25226792	25226793	1	G	core_nonrep	7	1	1
Rue3-1-31	5	25260138	25260139	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25260501	25260502	1	T	nonrep	4	1	1
Rue3-1-31	5	25260811	25260812	1	A	core_nonrep	10	0.888889	1
Rue3-1-31	5	25347224	25347225	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25347237	25347238	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25347392	25347393	1	T	core_nonrep	8	0.875	1
Rue3-1-31	5	25347427	25347428	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25353337	25353338	1	T	core_nonrep	3	1	1
Rue3-1-31	5	25355443	25355444	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25356986	25356987	2	AT	core_nonrep	4	0.75	1
Rue3-1-31	5	25357525	25357526	1	T	core_nonrep	13	1	1
Rue3-1-31	5	25358201	25358202	1	G	nonrep	9	0.818182	1
Rue3-1-31	5	25359105	25359106	1	A	core_nonrep	16	1	1
Rue3-1-31	5	25359165	25359166	1	T	core_nonrep	22	0.909091	1
Rue3-1-31	5	25362191	25362192	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	25370499	25370500	2	AG	core_nonrep	8	1	1
Rue3-1-31	5	25374334	25374335	1	T	core_nonrep	3	1	1
Rue3-1-31	5	25388024	25388025	3	AAC	core_nonrep	15	0.777778	1
Rue3-1-31	5	25388266	25388267	1	C	core_nonrep	8	1	1
Rue3-1-31	5	25396396	25396397	1	A	core_nonrep	10	0.875	1
Rue3-1-31	5	25398547	25398548	2	AT	core_nonrep	3	1	1
Rue3-1-31	5	25399372	25399373	1	G	core_nonrep	9	0.777778	1
Rue3-1-31	5	25399438	25399439	1	A	core_nonrep	3	1	1
Rue3-1-31	5	25400987	25400988	1	G	nonrep	4	1	1
Rue3-1-31	5	25402082	25402083	1	T	core_nonrep	17	0.941176	1
Rue3-1-31	5	25407496	25407497	2	AA	core_nonrep	13	1	1
Rue3-1-31	5	25418797	25418798	1	C	core_nonrep	7	1	1
Rue3-1-31	5	25419446	25419447	1	T	core_nonrep	7	1	1
Rue3-1-31	5	25425224	25425225	1	T	core_nonrep	9	1	1
Rue3-1-31	5	25435289	25435290	1	C	core_nonrep	5	1	1
Rue3-1-31	5	25435481	25435482	1	T	core_nonrep	8	1	1
Rue3-1-31	5	25448290	25448291	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25453538	25453539	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	25453752	25453753	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25475262	25475263	1	T	core_nonrep	11	1	1
Rue3-1-31	5	25475265	25475266	1	T	core_nonrep	11	1	1
Rue3-1-31	5	25493787	25493788	1	C	core_nonrep	12	0.923077	1
Rue3-1-31	5	25503974	25503975	1	T	nonrep	3	1	1
Rue3-1-31	5	25504073	25504074	1	A	core_nonrep	6	1	1
Rue3-1-31	5	25504094	25504095	1	C	core_nonrep	4	1	1
Rue3-1-31	5	25504616	25504617	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	25506154	25506155	1	T	core_nonrep	8	1	1
Rue3-1-31	5	25506328	25506329	2	CT	core_nonrep	11	0.9	1
Rue3-1-31	5	25506329	25506330	1	T	core_nonrep	11	1	1
Rue3-1-31	5	25510662	25510663	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25510968	25510969	2	AT	core_nonrep	4	1	1
Rue3-1-31	5	25521126	25521127	1	A	core_nonrep	7	0.857143	1
Rue3-1-31	5	25525690	25525691	1	C	core_nonrep	12	0.857143	1
Rue3-1-31	5	25525691	25525692	2	TT	core_nonrep	12	1	1
Rue3-1-31	5	25527531	25527532	1	G	nonrep	3	1	1
Rue3-1-31	5	25528700	25528701	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	25534223	25534224	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	25535491	25535492	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25543484	25543485	1	A	core_nonrep	10	1	1
Rue3-1-31	5	25548145	25548146	1	T	core_nonrep	4	0.8	1
Rue3-1-31	5	25553878	25553879	1	T	nonrep	7	0.875	1
Rue3-1-31	5	25554314	25554315	2	CA	core_nonrep	5	1	1
Rue3-1-31	5	25554321	25554322	1	A	core_nonrep	6	1	1
Rue3-1-31	5	25557721	25557722	1	T	core_nonrep	12	0.733333	1
Rue3-1-31	5	25557917	25557918	1	A	core_nonrep	15	0.923077	1
Rue3-1-31	5	25558098	25558099	1	A	core_nonrep	12	1	1
Rue3-1-31	5	25566547	25566548	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	25566652	25566653	1	A	core_nonrep	6	1	1
Rue3-1-31	5	25568711	25568712	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	25569409	25569410	1	C	core_nonrep	13	1	1
Rue3-1-31	5	25569680	25569681	1	G	core_nonrep	12	1	1
Rue3-1-31	5	25572606	25572607	1	T	core_nonrep	8	1	1
Rue3-1-31	5	25572887	25572888	1	T	core_nonrep	12	0.909091	1
Rue3-1-31	5	25573928	25573929	1	T	core_nonrep	9	1	1
Rue3-1-31	5	25576035	25576036	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	25589133	25589134	1	A	core_nonrep	7	1	1
Rue3-1-31	5	25595347	25595348	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	25605202	25605203	1	G	core_nonrep	5	1	1
Rue3-1-31	5	25605276	25605277	1	C	core_nonrep	9	0.818182	1
Rue3-1-31	5	25605278	25605279	1	T	core_nonrep	11	0.818182	1
Rue3-1-31	5	25608729	25608730	1	T	core_nonrep	9	1	1
Rue3-1-31	5	25608774	25608775	1	G	core_nonrep	11	1	1
Rue3-1-31	5	25609019	25609020	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25609047	25609048	1	T	core_nonrep	3	1	1
Rue3-1-31	5	25609048	25609049	1	G	core_nonrep	3	1	1
Rue3-1-31	5	25611389	25611390	1	A	core_nonrep	7	1	1
Rue3-1-31	5	25612077	25612078	1	A	core_nonrep	9	1	1
Rue3-1-31	5	25615287	25615288	2	AA	core_nonrep	3	1	1
Rue3-1-31	5	25615451	25615452	1	A	core_nonrep	7	1	1
Rue3-1-31	5	25618803	25618804	1	G	core_nonrep	16	1	1
Rue3-1-31	5	25619090	25619091	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	25623901	25623902	1	T	core_nonrep	11	1	1
Rue3-1-31	5	25627300	25627301	1	T	core_nonrep	11	0.9	1
Rue3-1-31	5	25628119	25628120	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	25633523	25633524	1	G	core_nonrep	3	1	1.4
Rue3-1-31	5	25650952	25650953	1	A	core_nonrep	13	0.909091	1
Rue3-1-31	5	25658215	25658216	1	A	core_nonrep	9	1	1
Rue3-1-31	5	25662017	25662018	2	AT	nonrep	5	0.833333	1
Rue3-1-31	5	25662516	25662517	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25663375	25663376	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25665033	25665034	1	C	core_nonrep	3	1	1
Rue3-1-31	5	25665125	25665126	1	C	core_nonrep	6	1	1
Rue3-1-31	5	25666962	25666963	1	A	core_nonrep	8	1	1
Rue3-1-31	5	25667282	25667283	1	G	core_nonrep	4	1	1
Rue3-1-31	5	25669309	25669310	1	A	core_nonrep	6	1	1
Rue3-1-31	5	25673754	25673755	1	A	core_nonrep	7	1	1
Rue3-1-31	5	25673805	25673806	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	25676320	25676321	1	T	core_nonrep	7	1	1
Rue3-1-31	5	25680476	25680477	1	A	core_nonrep	5	1	1
Rue3-1-31	5	25693504	25693505	1	A	core_nonrep	6	1	1
Rue3-1-31	5	25717651	25717652	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25717748	25717749	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	25722461	25722462	1	T	core_nonrep	3	1	1
Rue3-1-31	5	25722623	25722624	1	A	core_nonrep	3	1	1
Rue3-1-31	5	25722867	25722868	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	25724097	25724098	1	T	core_nonrep	9	0.818182	1
Rue3-1-31	5	25738260	25738261	1	A	core_nonrep	3	1	1
Rue3-1-31	5	25738499	25738500	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	25746737	25746738	1	G	core_nonrep	13	0.818182	1
Rue3-1-31	5	25764322	25764323	1	A	core_nonrep	14	1	1
Rue3-1-31	5	25770139	25770140	1	T	core_nonrep	5	1	1
Rue3-1-31	5	25770237	25770238	1	A	core_nonrep	8	1	1
Rue3-1-31	5	25778649	25778650	1	A	core_nonrep	3	1	1
Rue3-1-31	5	25781660	25781661	1	C	core_nonrep	8	0.875	1
Rue3-1-31	5	25781878	25781879	1	C	core_nonrep	4	0.8	1
Rue3-1-31	5	25788673	25788674	2	TC	core_nonrep	11	0.916667	1
Rue3-1-31	5	25793232	25793233	1	G	core_nonrep	12	1	1
Rue3-1-31	5	25796778	25796779	3	GGC	core_nonrep	5	0.8	1
Rue3-1-31	5	25811523	25811524	1	T	core_nonrep	3	1	1
Rue3-1-31	5	25814753	25814754	1	C	core_nonrep	10	1	1
Rue3-1-31	5	25841946	25841947	1	T	core_nonrep	5	0.833333	1
Rue3-1-31	5	25843492	25843493	1	T	core_nonrep	14	0.8	1
Rue3-1-31	5	25843496	25843497	1	A	core_nonrep	13	0.916667	1
Rue3-1-31	5	25848565	25848566	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25848756	25848757	1	T	core_nonrep	10	1	1
Rue3-1-31	5	25854006	25854007	2	AT	core_nonrep	12	0.916667	1
Rue3-1-31	5	25857606	25857607	1	A	core_nonrep	4	1	1
Rue3-1-31	5	25859298	25859299	1	A	core_nonrep	10	1	1
Rue3-1-31	5	25867184	25867185	1	G	core_nonrep	10	0.9	1
Rue3-1-31	5	25867545	25867546	1	T	core_nonrep	6	1	1
Rue3-1-31	5	25879520	25879521	1	T	core_nonrep	9	0.888889	1
Rue3-1-31	5	25890146	25890147	1	T	core_nonrep	5	1	1
Rue3-1-31	5	25924548	25924549	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25940554	25940555	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	25955324	25955325	1	T	core_nonrep	4	1	1
Rue3-1-31	5	25961503	25961504	1	T	core_nonrep	13	1	1
Rue3-1-31	5	25968666	25968667	1	A	core_nonrep	11	0.8	1
Rue3-1-31	5	25975052	25975053	1	A	core_nonrep	12	1	1
Rue3-1-31	5	25994983	25994984	1	T	core_nonrep	7	1	1
Rue3-1-31	5	25997379	25997380	1	A	nonrep	4	1	1
Rue3-1-31	5	26003742	26003743	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26003872	26003873	1	G	core_nonrep	9	1	1
Rue3-1-31	5	26008078	26008079	1	G	core_nonrep	6	1	1
Rue3-1-31	5	26019477	26019478	1	A	core_nonrep	7	0.833333	1
Rue3-1-31	5	26022151	26022152	1	C	core_nonrep	5	1	1
Rue3-1-31	5	26034038	26034039	1	T	core_nonrep	8	0.8	1
Rue3-1-31	5	26038351	26038352	1	A	core_nonrep	7	0.875	1
Rue3-1-31	5	26038750	26038751	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26044045	26044046	1	G	core_nonrep	8	1	1
Rue3-1-31	5	26045122	26045123	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26045202	26045203	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26046262	26046263	1	A	core_nonrep	10	0.8	1
Rue3-1-31	5	26046263	26046264	1	G	core_nonrep	10	0.818182	1
Rue3-1-31	5	26046890	26046891	1	A	core_nonrep	3	0.75	1.16667
Rue3-1-31	5	26051212	26051213	1	A	core_nonrep	4	0.75	1
Rue3-1-31	5	26056478	26056479	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26056703	26056704	2	CC	core_nonrep	4	1	1
Rue3-1-31	5	26057388	26057389	1	A	core_nonrep	6	0.75	1
Rue3-1-31	5	26059916	26059917	2	TC	core_nonrep	9	1	1
Rue3-1-31	5	26060080	26060081	1	T	nonrep	5	0.714286	1
Rue3-1-31	5	26064843	26064844	2	TT	core_nonrep	12	1	1
Rue3-1-31	5	26064846	26064847	1	A	core_nonrep	12	1	1
Rue3-1-31	5	26070377	26070378	2	AA	core_nonrep	4	0.75	1
Rue3-1-31	5	26073564	26073565	1	A	core_nonrep	7	1	1
Rue3-1-31	5	26095854	26095855	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	26109552	26109553	1	T	core_nonrep	6	1	1
Rue3-1-31	5	26110078	26110079	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26118154	26118155	1	G	core_nonrep	9	0.875	1
Rue3-1-31	5	26119048	26119049	1	T	nonrep	5	0.833333	1
Rue3-1-31	5	26120353	26120354	1	G	core_nonrep	7	1	1
Rue3-1-31	5	26122547	26122548	1	A	core_nonrep	4	1	1
Rue3-1-31	5	26124360	26124361	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26140037	26140038	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26153961	26153962	3	AGG	core_nonrep	13	0.866667	1
Rue3-1-31	5	26154621	26154622	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	26157993	26157994	1	T	nonrep	3	0.75	1
Rue3-1-31	5	26164248	26164249	1	A	core_nonrep	10	0.833333	1
Rue3-1-31	5	26164264	26164265	1	A	core_nonrep	11	0.888889	1
Rue3-1-31	5	26166812	26166813	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26168618	26168619	1	T	core_nonrep	4	0.75	1
Rue3-1-31	5	26169956	26169957	1	T	core_nonrep	9	1	1
Rue3-1-31	5	26174587	26174588	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26182815	26182816	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26186446	26186447	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	26202423	26202424	2	AA	core_nonrep	4	1	1
Rue3-1-31	5	26210530	26210531	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26210531	26210532	2	CA	core_nonrep	6	1	1
Rue3-1-31	5	26211158	26211159	1	A	nonrep	3	0.75	1
Rue3-1-31	5	26211366	26211367	1	C	core_nonrep	7	1	1
Rue3-1-31	5	26211813	26211814	1	T	core_nonrep	6	1	1
Rue3-1-31	5	26217587	26217588	1	C	core_nonrep	8	1	1
Rue3-1-31	5	26225983	26225984	1	C	core_nonrep	5	0.8	1
Rue3-1-31	5	26236013	26236014	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26242732	26242733	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26243381	26243382	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26246306	26246307	1	G	core_nonrep	3	0.75	1
Rue3-1-31	5	26247866	26247867	1	A	core_nonrep	4	1	1
Rue3-1-31	5	26250885	26250886	1	G	core_nonrep	5	1	1
Rue3-1-31	5	26253191	26253192	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	26260059	26260060	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	26264695	26264696	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26264696	26264697	1	T	core_nonrep	5	0.8	1
Rue3-1-31	5	26273406	26273407	2	TC	core_nonrep	9	0.727273	1
Rue3-1-31	5	26282389	26282390	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26284568	26284569	1	C	core_nonrep	13	1	1
Rue3-1-31	5	26285048	26285049	1	T	core_nonrep	3	1	1
Rue3-1-31	5	26286295	26286296	1	A	core_nonrep	8	1	1
Rue3-1-31	5	26288876	26288877	1	A	core_nonrep	4	1	1
Rue3-1-31	5	26288880	26288881	1	C	core_nonrep	4	1	1
Rue3-1-31	5	26296979	26296980	1	T	core_nonrep	6	0.75	1
Rue3-1-31	5	26305289	26305290	1	A	nonrep	6	0.857143	1
Rue3-1-31	5	26305382	26305383	2	TA	core_nonrep	10	0.909091	1
Rue3-1-31	5	26305594	26305595	1	G	core_nonrep	11	1	1
Rue3-1-31	5	26306269	26306270	2	TT	core_nonrep	5	1	1
Rue3-1-31	5	26309078	26309079	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	26338360	26338361	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26343229	26343230	1	A	core_nonrep	9	1	1
Rue3-1-31	5	26343850	26343851	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26347693	26347694	1	C	core_nonrep	5	1	1
Rue3-1-31	5	26350608	26350609	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26366230	26366231	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26368094	26368095	1	A	core_nonrep	7	1	1
Rue3-1-31	5	26371464	26371465	1	T	core_nonrep	7	1	1
Rue3-1-31	5	26386936	26386937	1	T	core_nonrep	7	1	1
Rue3-1-31	5	26386981	26386982	1	A	core_nonrep	7	1	1
Rue3-1-31	5	26396772	26396773	1	A	core_nonrep	10	0.8	1
Rue3-1-31	5	26405335	26405336	1	C	core_nonrep	8	1	1
Rue3-1-31	5	26407713	26407714	1	T	core_nonrep	15	0.857143	1
Rue3-1-31	5	26408154	26408155	1	T	core_nonrep	6	0.833333	1
Rue3-1-31	5	26408252	26408253	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26408487	26408488	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26408707	26408708	1	T	core_nonrep	17	0.928571	1
Rue3-1-31	5	26410949	26410950	1	T	core_nonrep	10	0.75	1
Rue3-1-31	5	26414942	26414943	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26419073	26419074	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26423232	26423233	1	G	core_nonrep	6	1	1
Rue3-1-31	5	26424507	26424508	1	A	core_nonrep	6	0.833333	1
Rue3-1-31	5	26424818	26424819	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26425689	26425690	1	T	core_nonrep	13	1	1
Rue3-1-31	5	26425690	26425691	1	A	core_nonrep	15	1	1
Rue3-1-31	5	26427268	26427269	1	A	core_nonrep	11	1	1
Rue3-1-31	5	26429051	26429052	1	G	core_nonrep	7	0.875	1
Rue3-1-31	5	26429305	26429306	1	C	core_nonrep	3	1	1
Rue3-1-31	5	26430396	26430397	1	T	core_nonrep	14	0.928571	1
Rue3-1-31	5	26432101	26432102	1	T	core_nonrep	7	1	1
Rue3-1-31	5	26436601	26436602	1	T	core_nonrep	9	0.8	1
Rue3-1-31	5	26436602	26436603	2	AG	core_nonrep	9	0.727273	1
Rue3-1-31	5	26438383	26438384	2	GT	core_nonrep	11	0.909091	1
Rue3-1-31	5	26438625	26438626	2	AA	core_nonrep	8	0.777778	1
Rue3-1-31	5	26439322	26439323	1	C	core_nonrep	9	0.857143	1
Rue3-1-31	5	26455352	26455353	1	A	core_nonrep	10	0.909091	1
Rue3-1-31	5	26456262	26456263	1	C	core_nonrep	7	0.7	1
Rue3-1-31	5	26460528	26460529	1	A	core_nonrep	13	0.857143	1
Rue3-1-31	5	26465634	26465635	1	C	core_nonrep	5	1	1
Rue3-1-31	5	26478784	26478785	1	C	core_nonrep	10	1	1
Rue3-1-31	5	26485723	26485724	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26490338	26490339	1	T	core_nonrep	8	0.714286	1
Rue3-1-31	5	26492501	26492502	1	C	core_nonrep	5	1	1
Rue3-1-31	5	26499457	26499458	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26503427	26503428	1	T	core_nonrep	17	1	1
Rue3-1-31	5	26506922	26506923	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	26507536	26507537	1	C	core_nonrep	13	1	1
Rue3-1-31	5	26507751	26507752	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26516650	26516651	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	26517055	26517056	2	TT	core_nonrep	3	0.75	1
Rue3-1-31	5	26517403	26517404	1	C	core_nonrep	10	1	1
Rue3-1-31	5	26530395	26530396	1	T	core_nonrep	3	0.75	1
Rue3-1-31	5	26536420	26536421	1	A	core_nonrep	11	0.916667	1
Rue3-1-31	5	26545507	26545508	1	C	core_nonrep	5	1	1
Rue3-1-31	5	26546046	26546047	1	C	core_nonrep	9	1	1
Rue3-1-31	5	26548316	26548317	1	A	core_nonrep	12	0.923077	1
Rue3-1-31	5	26552701	26552702	1	C	core_nonrep	11	1	1
Rue3-1-31	5	26553988	26553989	1	C	core_nonrep	9	0.875	1
Rue3-1-31	5	26573246	26573247	1	A	core_nonrep	13	1	1.06667
Rue3-1-31	5	26573583	26573584	1	T	core_nonrep	3	1	1
Rue3-1-31	5	26579923	26579924	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26580537	26580538	1	C	core_nonrep	6	1	1
Rue3-1-31	5	26588693	26588694	1	T	core_nonrep	6	1	1
Rue3-1-31	5	26589327	26589328	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26589426	26589427	1	A	core_nonrep	9	0.8	1
Rue3-1-31	5	26590441	26590442	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26591090	26591091	1	T	core_nonrep	6	1	1
Rue3-1-31	5	26592253	26592254	1	A	core_nonrep	4	1	1
Rue3-1-31	5	26597223	26597224	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26597491	26597492	1	A	core_nonrep	6	1	1
Rue3-1-31	5	26601211	26601212	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26601638	26601639	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26601639	26601640	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26604499	26604500	1	T	core_nonrep	11	0.909091	1
Rue3-1-31	5	26607635	26607636	1	C	core_nonrep	7	1	1
Rue3-1-31	5	26610624	26610625	1	T	core_nonrep	5	0.714286	1
Rue3-1-31	5	26620382	26620383	1	T	core_nonrep	6	1	1
Rue3-1-31	5	26622934	26622935	1	A	core_nonrep	9	1	1
Rue3-1-31	5	26631019	26631020	1	A	core_nonrep	3	0.75	1
Rue3-1-31	5	26635561	26635562	1	A	core_nonrep	4	0.8	1
Rue3-1-31	5	26640268	26640269	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26640435	26640436	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26640668	26640669	1	C	nonrep	3	1	1
Rue3-1-31	5	26651420	26651421	1	T	core_nonrep	9	0.833333	1
Rue3-1-31	5	26656106	26656107	3	ATA	core_nonrep	5	0.8	1
Rue3-1-31	5	26658931	26658932	1	C	core_nonrep	7	0.7	1
Rue3-1-31	5	26658932	26658933	1	T	core_nonrep	7	0.875	1
Rue3-1-31	5	26663462	26663463	2	GT	core_nonrep	6	1	1
Rue3-1-31	5	26665218	26665219	1	A	core_nonrep	5	1	1
Rue3-1-31	5	26683260	26683261	1	T	core_nonrep	8	1	1
Rue3-1-31	5	26701776	26701777	1	T	core_nonrep	12	0.857143	1
Rue3-1-31	5	26702002	26702003	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26720993	26720994	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26723829	26723830	1	C	core_nonrep	10	1	1
Rue3-1-31	5	26724962	26724963	1	T	core_nonrep	6	0.857143	1
Rue3-1-31	5	26743290	26743291	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26743340	26743341	1	G	core_nonrep	7	1	1
Rue3-1-31	5	26743485	26743486	1	G	core_nonrep	4	1	1
Rue3-1-31	5	26743630	26743631	1	A	core_nonrep	11	0.9	1
Rue3-1-31	5	26743954	26743955	1	A	core_nonrep	9	0.75	1
Rue3-1-31	5	26782418	26782419	1	C	core_nonrep	3	0.75	1
Rue3-1-31	5	26782419	26782420	1	T	core_nonrep	4	1	1
Rue3-1-31	5	26786016	26786017	1	G	core_nonrep	6	1	1
Rue3-1-31	5	26839326	26839327	1	A	core_nonrep	3	1	1
Rue3-1-31	5	26848754	26848755	1	A	core_nonrep	7	1	1
Rue3-1-31	5	26863830	26863831	1	A	core_nonrep	4	1	1
Rue3-1-31	5	26887753	26887754	1	T	core_nonrep	5	1	1
Rue3-1-31	5	26908647	26908648	1	T	core_nonrep	7	1	1
Rue3-1-31	5	26935267	26935268	1	A	core_nonrep	5	0.75	1
Rue3-1-31	5	26950729	26950730	1	C	core_nonrep	6	1	1
Rue3-1-31	5	26953669	26953670	1	T	core_nonrep	7	0.75	1
Rue3-1-31	5	26953730	26953731	2	TT	core_nonrep	8	1	1
Rue3-1-31	5	26974994	26974995	1	A	core_nonrep	7	1	1
Rue3-1-31	5	26982386	26982387	2	AA	core_nonrep	8	0.875	1
Rue3-1-31	7	4950	4951	1	G	core_nonrep	50	0.92	1
Rue3-1-31	7	8622	8623	1	G	core_nonrep	27	1	1
Rue3-1-31	7	10472	10473	1	C	core_nonrep	26	0.888889	1
Rue3-1-31	7	14352	14353	1	G	core_nonrep	21	0.947368	1
Rue3-1-31	7	15730	15731	1	C	core_nonrep	37	1	1
Rue3-1-31	7	16642	16643	1	C	core_nonrep	24	1	1
Rue3-1-31	7	18960	18961	1	C	core_nonrep	18	0.823529	1
Rue3-1-31	7	20430	20431	1	G	core_nonrep	21	1	1
Rue3-1-31	7	20818	20819	1	C	core_nonrep	25	0.923077	1
Rue3-1-31	7	20887	20888	1	T	core_nonrep	30	0.875	1
Rue3-1-31	7	20914	20915	1	C	core_nonrep	30	0.88	1
Rue3-1-31	7	21560	21561	1	C	core_nonrep	17	1	1
Rue3-1-31	7	21643	21644	1	C	core_nonrep	27	0.916667	1
Rue3-1-31	7	22438	22439	1	A	core_nonrep	26	0.882353	1
Rue3-1-31	7	22627	22628	1	C	core_nonrep	16	1	1
Rue3-1-31	7	22630	22631	1	C	core_nonrep	15	1	1
Rue3-1-31	7	22827	22828	1	A	core_nonrep	24	0.863636	1
Rue3-1-31	7	27296	27297	1	G	core_nonrep	33	0.913043	1
Rue3-1-31	7	27551	27552	1	G	core_nonrep	22	0.909091	1
Rue3-1-31	7	29620	29621	1	C	core_nonrep	10	0.909091	1
Rue3-1-31	7	31590	31591	1	C	core_nonrep	34	1	1
Rue3-1-31	7	33455	33456	1	T	core_nonrep	11	1	1
Rue3-1-31	7	35794	35795	1	C	core_nonrep	20	1	1
Rue3-1-31	7	36167	36168	1	A	core_nonrep	31	0.851852	1
Rue3-1-31	7	44303	44304	1	T	core_nonrep	15	0.923077	1
Rue3-1-31	7	44316	44317	1	T	core_nonrep	12	1	1
Rue3-1-31	7	56825	56826	1	G	core_nonrep	33	1	1
Rue3-1-31	7	63426	63427	1	C	core_nonrep	29	1	1
Rue3-1-31	7	68633	68634	1	C	core_nonrep	20	0.826087	1
Rue3-1-31	7	73869	73870	1	G	core_nonrep	17	0.928571	1
Rue3-1-31	7	81014	81015	1	C	core_nonrep	27	0.92	1
Rue3-1-31	7	85316	85317	1	C	core_nonrep	19	0.888889	1
Rue3-1-31	7	85720	85721	1	C	core_nonrep	36	0.885714	1
Rue3-1-31	7	87729	87730	1	C	core_nonrep	15	0.928571	1
Rue3-1-31	7	87758	87759	1	T	core_nonrep	10	1	1
Rue3-1-31	7	87790	87791	1	T	core_nonrep	21	1	1
Rue3-1-31	7	95691	95692	1	C	core_nonrep	19	1	1
Rue3-1-31	7	95972	95973	1	A	core_nonrep	22	0.833333	1
Rue3-1-31	7	99753	99754	1	C	core_nonrep	35	0.933333	1
Rue3-1-31	7	100595	100596	1	C	core_nonrep	25	0.913043	1
Rue3-1-31	7	101928	101929	1	T	core_nonrep	32	1	1
Rue3-1-31	7	101957	101958	1	T	core_nonrep	16	1	1
Rue3-1-31	7	102736	102737	1	C	core_nonrep	33	0.833333	1
Rue3-1-31	7	102824	102825	1	G	core_nonrep	21	0.952381	1
Rue3-1-31	7	102831	102832	1	T	core_nonrep	18	1	1
Rue3-1-31	7	104806	104807	1	C	core_nonrep	5	1	1
Rue3-1-31	7	104837	104838	1	G	core_nonrep	15	0.777778	1
Rue3-1-31	7	106504	106505	1	G	core_nonrep	23	0.909091	1
Rue3-1-31	7	106918	106919	1	T	core_nonrep	14	1	1
Rue3-1-31	7	106966	106967	1	G	core_nonrep	7	1	1
Rue3-1-31	7	110277	110278	1	C	core_nonrep	25	0.9	1
Rue3-1-31	7	110295	110296	1	C	core_nonrep	16	1	1
Rue3-1-31	7	110307	110308	1	T	core_nonrep	12	0.9	1
Rue3-1-31	7	110311	110312	1	T	core_nonrep	10	1	1
Rue3-1-31	7	110317	110318	1	T	core_nonrep	11	1	1
Rue3-1-31	7	110345	110346	1	T	core_nonrep	26	0.96	1
Rue3-1-31	7	110348	110349	1	C	core_nonrep	27	0.962963	1
Rue3-1-31	7	110886	110887	1	G	core_nonrep	31	0.928571	1
Rue3-1-31	7	111299	111300	1	G	core_nonrep	23	1	1.46667
Rue3-1-31	7	125539	125540	1	A	core_nonrep	40	1	1
Rue3-1-31	7	125550	125551	1	C	core_nonrep	31	0.857143	1
Rue3-1-31	7	133104	133105	1	C	core_nonrep	28	1	1
Rue3-1-31	7	137104	137105	1	C	core_nonrep	22	1	1
Rue3-1-31	7	137628	137629	1	G	core_nonrep	21	0.95	1
Rue3-1-31	7	139992	139993	1	T	core_nonrep	27	0.833333	1
Rue3-1-31	7	142198	142199	1	C	core_nonrep	22	1	1
Rue3-1-31	7	142203	142204	1	C	core_nonrep	19	0.85	1
Rue3-1-31	7	142434	142435	1	G	core_nonrep	26	0.777778	1
Rue3-1-31	7	143785	143786	1	G	core_nonrep	13	0.928571	1
Rue3-1-31	7	149982	149983	1	G	core_nonrep	30	0.96	1
Rue3-1-31	7	150080	150081	1	G	core_nonrep	13	0.928571	1
Rue3-1-31	7	151304	151305	1	G	core_nonrep	34	0.848485	1
Rue3-1-31	7	162221	162222	1	C	core_nonrep	10	0.833333	1
Rue3-1-31	7	175093	175094	1	G	core_nonrep	27	0.925926	1
Rue3-1-31	7	177537	177538	1	C	core_nonrep	20	1	1
Rue3-1-31	7	187900	187901	1	G	core_nonrep	22	1	1
Rue3-1-31	7	187940	187941	1	C	core_nonrep	18	1	1
Rue3-1-31	7	191072	191073	1	G	core_nonrep	18	0.941176	1
Rue3-1-31	7	195757	195758	1	G	core_nonrep	33	0.965517	1
Rue3-1-31	7	199115	199116	1	G	core_nonrep	31	0.848485	1
Rue3-1-31	7	200000	200001	1	C	core_nonrep	24	1	1
Rue3-1-31	7	200346	200347	1	C	core_nonrep	20	1	1
Rue3-1-31	7	202117	202118	1	G	core_nonrep	20	0.888889	1
Rue3-1-31	7	202232	202233	1	A	core_nonrep	22	1	1
Rue3-1-31	7	205442	205443	1	G	core_nonrep	39	0.923077	1
Rue3-1-31	7	206462	206463	1	C	core_nonrep	27	0.814815	1
Rue3-1-31	7	209522	209523	1	C	core_nonrep	18	0.928571	1
Rue3-1-31	7	209550	209551	1	C	core_nonrep	11	1	1
Rue3-1-31	7	209553	209554	1	C	core_nonrep	8	0.888889	1
Rue3-1-31	7	209561	209562	1	T	core_nonrep	7	0.875	1
Rue3-1-31	7	209573	209574	1	C	core_nonrep	11	1	1
Rue3-1-31	7	209618	209619	1	G	core_nonrep	22	0.9	1
Rue3-1-31	7	209712	209713	1	C	core_nonrep	30	1	1
Rue3-1-31	7	209881	209882	1	G	core_nonrep	18	0.888889	1
Rue3-1-31	7	210724	210725	1	T	core_nonrep	8	0.7	1
Rue3-1-31	7	212696	212697	1	G	core_nonrep	30	0.869565	1
Rue3-1-31	7	218246	218247	1	G	nonrep	11	0.6875	1
Rue3-1-31	7	227062	227063	1	C	core_nonrep	19	0.888889	1
Rue3-1-31	7	237587	237588	1	G	core_nonrep	38	1	1
Rue3-1-31	7	238755	238756	1	G	core_nonrep	35	1	1
Rue3-1-31	7	238987	238988	1	C	core_nonrep	35	0.911765	1
Rue3-1-31	7	238994	238995	1	C	core_nonrep	34	1	1
Rue3-1-31	7	241333	241334	1	C	core_nonrep	19	0.941176	1
Rue3-1-31	7	247392	247393	1	G	core_nonrep	24	0.909091	1
Rue3-1-31	7	247518	247519	1	C	core_nonrep	38	1	1
Rue3-1-31	7	250426	250427	1	G	core_nonrep	15	1	1
Rue3-1-31	7	251450	251451	1	T	core_nonrep	24	0.95	1
Rue3-1-31	7	252267	252268	1	G	core_nonrep	15	0.846154	1
Rue3-1-31	7	258291	258292	1	C	core_nonrep	19	1	1
Rue3-1-31	7	258297	258298	1	C	core_nonrep	19	0.944444	1
Rue3-1-31	7	258304	258305	1	C	core_nonrep	27	1	1
Rue3-1-31	7	258838	258839	1	T	core_nonrep	9	1	1
Rue3-1-31	7	258840	258841	1	G	core_nonrep	5	1	1
Rue3-1-31	7	258842	258843	1	A	core_nonrep	3	1	1
Rue3-1-31	7	258863	258864	1	A	core_nonrep	14	0.909091	1
Rue3-1-31	7	258873	258874	1	A	core_nonrep	18	0.894737	1
Rue3-1-31	7	261646	261647	1	C	core_nonrep	14	0.823529	1
Rue3-1-31	7	265613	265614	1	T	core_nonrep	21	1	1
Rue3-1-31	7	265620	265621	1	T	core_nonrep	24	0.956522	1
Rue3-1-31	7	266210	266211	1	A	core_nonrep	32	0.925926	1
Rue3-1-31	7	266810	266811	1	C	core_nonrep	52	0.84	1
Rue3-1-31	7	267548	267549	1	C	core_nonrep	41	0.864865	1
Rue3-1-31	7	270610	270611	1	A	core_nonrep	18	1	1
Rue3-1-31	7	284670	284671	2	GC	core_nonrep	22	1	1
Rue3-1-31	7	284678	284679	1	C	core_nonrep	20	0.941176	1
Rue3-1-31	7	290088	290089	1	G	core_nonrep	24	0.866667	1
Rue3-1-31	7	306000	306001	1	G	core_nonrep	11	0.888889	1
Rue3-1-31	7	307292	307293	1	C	core_nonrep	26	0.96	1
Rue3-1-31	7	307746	307747	1	C	core_nonrep	12	0.777778	1
Rue3-1-31	7	309372	309373	1	C	core_nonrep	25	1	1
Rue3-1-31	7	320696	320697	1	G	core_nonrep	29	0.925926	1
Rue3-1-31	7	328799	328800	1	G	core_nonrep	23	1	1
Rue3-1-31	7	329238	329239	1	C	nonrep	7	0.777778	1
Rue3-1-31	7	330742	330743	1	C	core_nonrep	11	0.909091	1
Rue3-1-31	7	330849	330850	1	G	core_nonrep	21	0.944444	1
Rue3-1-31	7	331864	331865	1	C	core_nonrep	17	1	1
Rue3-1-31	7	332096	332097	1	T	core_nonrep	16	1	1
Rue3-1-31	7	332254	332255	1	G	core_nonrep	23	0.947368	1
Rue3-1-31	7	332773	332774	1	T	core_nonrep	22	0.714286	1
Rue3-1-31	7	334098	334099	1	C	core_nonrep	8	0.714286	1
Rue3-1-31	7	335409	335410	1	G	core_nonrep	38	0.965517	1
Rue3-1-31	7	341270	341271	1	C	core_nonrep	31	0.9	1
Rue3-1-31	7	341875	341876	1	G	core_nonrep	18	0.818182	1
Rue3-1-31	7	345580	345581	1	C	core_nonrep	28	0.9375	1.37143
Rue3-1-31	7	354759	354760	1	C	core_nonrep	42	1	1
Rue3-1-31	7	355218	355219	1	A	core_nonrep	24	0.814815	1
Rue3-1-31	7	356210	356211	1	C	core_nonrep	20	0.9375	1
Rue3-1-31	7	360191	360192	1	G	core_nonrep	18	0.833333	1
Rue3-1-31	7	360612	360613	1	A	core_nonrep	41	0.886364	1
Rue3-1-31	7	362416	362417	1	T	core_nonrep	49	0.871795	1
Rue3-1-31	7	362878	362879	1	G	core_nonrep	25	1	1
Rue3-1-31	7	366204	366205	1	G	core_nonrep	39	1	1