SnpEff: Variant analysis

Contents
Summary
Variant rate by chromosome
Variants by type
Number of variants by impact
Number of variants by functional class
Number of variants by effect
Quality histogram
InDel length histogram
Base variant table
Transition vs transversions (ts/tv)
Allele frequency
Allele Count
Codon change table
Amino acid change table
Chromosome variants plots
Details by gene
Summary

Genome tair10
Date 2014-12-02 09:06
SnpEff version 
SnpEff 4.0e (build 2014-09-13), by Pablo Cingolani
Command line arguments 
SnpEff  -lof -stats 1001genomes_snp-short-indel_only_ACGTN.vcf.html 
tair10 1001genomes_snp-short-indel_only_ACGTN.vcf
Warnings 41,559
Errors 0
Number of lines (input file) 12,883,854
Number of variants (before filter) 14,144,409
Number of not variants
(i.e. reference equals alternative) 		0
Number of variants processed
(i.e. after filter and non-variants) 		14,144,409
Number of known variants
(i.e. non-empty ID) 		0 ( 0% )
Number of multi-allelic VCF entries
(i.e. more than two alleles) 		1,113,934
Number of effects 45,319,105
Genome total length 119,667,750
Genome effective length 119,146,348
Variant rate 1 variant every 8 bases

Variants rate details

Chromosome Length Variants Variants rate
1 30,427,671 3,426,267 8
2 19,698,289 2,474,738 7
3 23,459,830 2,933,050 7
4 18,585,056 2,336,844 7
5 26,975,502 2,973,510 9
Total 119,146,348 14,144,409 8

Number variantss by type

Type Total
SNP 12,545,539
MNP 0
INS 739,380
DEL 859,490
MIXED 0
INTERVAL 0
Total 14,144,409

Number of effects by impact

Type (alphabetical order)   Count Percent
HIGH   107,736 0.238%
LOW   1,303,377 2.876%
MODERATE   1,465,272 3.233%
MODIFIER   42,442,720 93.653%

Number of effects by functional class

Type (alphabetical order)   Count Percent
MISSENSE   1,451,854 57.269%
NONSENSE   31,522 1.243%
SILENT   1,051,783 41.488%

Missense / Silent ratio: 1.3804

Number of effects by type and region

Type Region
Type (alphabetical order)   Count Percent
3_prime_UTR_variant   665,243 1.468%
5_prime_UTR_premature_start_codon_gain_variant   42,385 0.094%
5_prime_UTR_variant   403,193 0.89%
disruptive_inframe_deletion   5,289 0.012%
disruptive_inframe_insertion   1,807 0.004%
downstream_gene_variant   14,046,407 30.994%
frameshift_variant   52,135 0.115%
frameshift_variant+start_lost   898 0.002%
frameshift_variant+stop_gained   551 0.001%
frameshift_variant+stop_lost   708 0.002%
inframe_deletion   6,825 0.015%
inframe_insertion   5,463 0.012%
initiator_codon_variant   496 0.001%
intergenic_region   7,437,298 16.411%
intragenic_variant   554 0.001%
intron_variant   2,995,318 6.609%
missense_variant   1,445,888 3.19%
non_coding_exon_variant   1,804,850 3.983%
splice_acceptor_variant   8,085 0.018%
splice_donor_variant   7,931 0.018%
splice_region_variant   208,713 0.461%
start_lost   2,581 0.006%
start_lost+disruptive_inframe_deletion   6 0%
start_lost+disruptive_inframe_insertion   10 0%
start_lost+inframe_deletion   58 0%
start_lost+inframe_insertion   30 0%
stop_gained   31,522 0.07%
stop_gained+disruptive_inframe_deletion   78 0%
stop_gained+disruptive_inframe_insertion   51 0%
stop_gained+inframe_insertion   70 0%
stop_lost   2,889 0.006%
stop_lost+disruptive_inframe_deletion   19 0%
stop_lost+disruptive_inframe_insertion   6 0%
stop_lost+inframe_deletion   108 0%
stop_retained_variant   2,216 0.005%
synonymous_variant   1,049,567 2.316%
upstream_gene_variant   15,089,857 33.297%

Type (alphabetical order)   Count Percent
DOWNSTREAM   14,046,407 30.994%
EXON   4,410,940 9.733%
INTERGENIC   7,437,298 16.411%
INTRON   2,995,318 6.609%
NONE   554 0.001%
SPLICE_SITE_ACCEPTOR   8,085 0.018%
SPLICE_SITE_DONOR   7,931 0.018%
SPLICE_SITE_REGION   208,713 0.461%
TRANSCRIPT   3,181 0.007%
UPSTREAM   15,089,857 33.297%
UTR_3_PRIME   665,243 1.468%
UTR_5_PRIME   445,578 0.983%

Quality: 

	

		
 Min30 

		
 Max40 

		
 Mean39.946 

		
 Median40 

		
 Standard deviation0.428 

		
 Values30,32,34,36,38,40 

		
 Count4922,11803,809,2504,268886,12594930
Insertions and deletions length: 

	

		
 Min0 

		
 Max39 

		
 Mean0.987 

		
 Median1 

		
 Standard deviation1.473 

		
 Values0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,33,34,37,38,39 

		
 Count479420,982490,49629,30368,13373,10472,7963,7027,4402,3026,2447,2058,1481,1136,917,662,508,381,304,208,169,141,97,57,47,28,24,15,7,6,1,1,1,1,1,1,1
Base changes (SNPs)

  A C G T
A 0 639,395 1,252,721 986,957
C 724,640 0 510,275 2,161,118
G 2,160,527 511,447 0 726,308
T 984,316 1,249,208 638,627 0

Ts/Tv (transitions / transversions)

Note: Only SNPs are used for this statistic.
Note: This Ts/Tv ratio is a 'raw' ratio (ratio of observed events).

Transitions 598,409,686
Transversions 495,922,926
Ts/Tv ratio 1.2067

All variants: 

Sample ,88,108,139,159,265,350,351,403,410,424,428,430,470,476,484,504,506,531,544,546,628,630,680,681,685,687,728,742,763,765,766,768,772,801,853,854,867,868,870,915,932,991,992,997,1002,1006,1061,1062,1063,1066,1070,1158,1166,1254,1257,1313,1317,1552,1612,1622,1651,1652,1676,1684,1739,1741,1756,1757,1793,1797,1819,1820,1829,1834,1835,1851,1852,1853,1872,1890,1925,1942,1943,1954,2016,2017,2031,2053,2057,2081,2091,2106,2108,2141,2159,2166,2171,2191,2202,2212,2239,2240,2276,2278,2285,2286,2317,2370,2412,4779,4807,4826,4840,4857,4884,4900,4939,4958,5023,5104,5151,5165,5210,5236,5249,5253,5276,5279,5349,5353,5395,5486,5577,5644,5651,5717,5718,5720,5726,5741,5748,5757,5768,5772,5776,5779,5784,5798,5800,5811,5822,5830,5831,5832,5836,5837,5856,5860,5865,5867,5874,5890,5893,5907,5921,5950,5984,5993,6008,6009,6010,6011,6012,6013,6016,6017,6019,6020,6021,6022,6023,6024,6025,6030,6034,6035,6036,6038,6039,6040,6041,6042,6043,6046,6064,6069,6070,6071,6073,6074,6076,6077,6085,6086,6087,6088,6090,6091,6092,6094,6095,6096,6097,6098,6099,6100,6101,6102,6104,6105,6106,6107,6108,6109,6111,6112,6113,6114,6115,6118,6119,6122,6123,6124,6125,6126,6128,6131,6132,6133,6134,6136,6137,6138,6140,6141,6142,6145,6148,6149,6150,6151,6153,6154,6163,6166,6169,6172,6173,6174,6177,6180,6184,6188,6189,6191,6192,6193,6194,6195,6198,6201,6202,6203,6209,6210,6214,6216,6217,6218,6220,6221,6231,6235,6237,6238,6240,6241,6242,6243,6244,6252,6255,6258,6268,6276,6284,6296,6390,6396,6413,6424,6434,6445,6680,6739,6740,6744,6749,6750,6805,6806,6814,6830,6897,6898,6900,6901,6903,6904,6907,6908,6909,6911,6913,6915,6917,6918,6919,6920,6922,6923,6924,6926,6927,6929,6931,6932,6933,6938,6940,6943,6944,6945,6951,6956,6957,6958,6959,6960,6961,6963,6966,6967,6968,6969,6970,6971,6973,6974,6975,6976,6979,6981,6982,6984,6986,6987,6989,6990,6992,6997,7000,7002,7003,7008,7013,7014,7025,7026,7028,7031,7033,7036,7058,7061,7062,7063,7064,7067,7068,7071,7072,7077,7081,7092,7094,7096,7102,7103,7106,7107,7109,7111,7117,7119,7120,7125,7126,7127,7130,7133,7138,7143,7147,7158,7160,7161,7162,7163,7164,7165,7169,7177,7181,7183,7186,7192,7199,7202,7203,7207,7208,7209,7213,7217,7218,7223,7231,7236,7244,7248,7250,7255,7258,7268,7273,7276,7280,7282,7287,7288,7296,7298,7305,7306,7307,7314,7316,7319,7320,7322,7323,7327,7328,7332,7333,7337,7342,7343,7344,7346,7347,7349,7350,7353,7354,7356,7358,7359,7372,7373,7377,7378,7382,7383,7384,7387,7394,7396,7404,7411,7413,7415,7416,7417,7418,7419,7424,7427,7430,7460,7461,7471,7475,7477,7514,7515,7516,7517,7520,7521,7523,7525,7529,7530,7566,7568,7717,7757,7767,7917,7947,8037,8057,8077,8132,8171,8214,8222,8227,8230,8231,8233,8234,8235,8236,8237,8238,8239,8240,8241,8242,8243,8244,8246,8247,8249,8256,8258,8259,8264,8283,8284,8285,8290,8297,8306,8307,8311,8312,8326,8334,8335,8337,8343,8351,8354,8357,8365,8366,8369,8376,8386,8387,8419,8420,8422,8424,8426,8427,8464,8483,8699,8723,9027,9057,9058,9067,9069,9070,9075,9078,9079,9081,9084,9085,9089,9091,9095,9099,9100,9102,9103,9104,9105,9106,9111,9113,9114,9115,9121,9125,9128,9130,9131,9133,9134,9298,9312,9314,9321,9323,9332,9336,9339,9343,9352,9353,9363,9369,9370,9371,9380,9381,9382,9383,9386,9388,9390,9391,9392,9394,9395,9399,9402,9404,9405,9407,9408,9409,9412,9413,9416,9421,9427,9433,9436,9437,9442,9450,9451,9452,9453,9454,9455,9470,9471,9476,9481,9503,9506,9507,9508,9509,9510,9511,9512,9513,9514,9515,9517,9518,9519,9520,9521,9522,9523,9524,9525,9526,9527,9528,9529,9530,9531,9532,9533,9534,9535,9536,9537,9539,9540,9541,9542,9543,9544,9545,9546,9547,9548,9549,9550,9551,9552,9553,9554,9555,9556,9557,9558,9559,9560,9561,9562,9564,9565,9567,9568,9569,9571,9573,9574,9576,9577,9578,9579,9581,9582,9583,9584,9585,9586,9587,9588,9589,9590,9591,9592,9593,9594,9595,9596,9597,9598,9599,9600,9601,9602,9606,9607,9608,9609,9610,9611,9612,9613,9615,9616,9617,9619,9620,9621,9622,9624,9625,9626,9627,9628,9629,9630,9631,9632,9633,9634,9635,9636,9637,9638,9639,9640,9641,9642,9643,9644,9645,9646,9647,9648,9649,9651,9653,9655,9656,9657,9658,9659,9660,9661,9663,9664,9665,9666,9667,9668,9669,9670,9671,9672,9673,9676,9677,9678,9679,9680,9681,9682,9683,9684,9685,9686,9687,9689,9690,9691,9692,9693,9694,9695,9696,9697,9698,9699,9700,9701,9703,9704,9705,9706,9707,9708,9709,9710,9711,9712,9713,9714,9716,9717,9718,9719,9720,9721,9722,9723,9725,9726,9727,9728,9729,9730,9731,9732,9733,9735,9736,9737,9738,9739,9741,9743,9744,9745,9747,9748,9749,9754,9755,9756,9757,9758,9759,9761,9762,9764,9766,9768,9769,9770,9771,9772,9774,9775,9776,9777,9778,9779,9780,9781,9782,9783,9784,9785,9786,9787,9788,9789,9790,9791,9792,9793,9794,9795,9796,9797,9798,9799,9800,9801,9802,9803,9804,9805,9806,9807,9808,9809,9810,9811,9812,9813,9814,9815,9816,9817,9819,9820,9821,9822,9823,9824,9825,9826,9827,9828,9830,9831,9832,9833,9834,9835,9836,9837,9838,9839,9840,9841,9843,9844,9845,9846,9847,9848,9849,9850,9851,9852,9853,9854,9855,9856,9857,9858,9859,9860,9861,9862,9864,9866,9867,9868,9869,9870,9871,9873,9874,9875,9876,9877,9878,9879,9880,9881,9882,9883,9885,9886,9887,9888,9890,9891,9892,9894,9895,9897,9898,9899,9900,9901,9902,9903,9904,9905,9906,9908,9909,9910,9911,9912,9914,9915,9917,9918,9920,9921,9924,9925,9926,9927,9928,9929,9930,9932,9933,9935,9937,9938,9939,9941,9942,9943,9944,9945,9946,9947,9948,9949,9950,9951,9952,9953,9955,9956,9957,9958,9959,9960,9962,9963,9964,9965,9966,9968,9969,9970,9971,9972,9973,9974,9975,9976,9978,9979,9980,9981,9982,9983,9984,9985,9986,9987,9988,9990,9991,9993,9995,9996,9997,9998,9999,10001,10002,10004,10005,10006,10008,10009,10010,10011,10012,10013,10014,10015,10017,10018,10020,10022,10023,10027,14312,14313,14314,14315,14318,14319,15560,15591,15592,15593,18694,18696,19949,19950,19951,Total
Transitions ,309146,400862,361370,360574,414116,384124,402074,377126,340892,366812,341426,503322,513716,513500,499322,493192,573250,417630,603832,606034,634712,387918,603302,588206,602086,580412,574666,509122,617134,516270,536792,552344,595930,569806,604148,603104,589136,579450,580066,477456,545962,591028,496076,551544,532138,634436,495462,592036,549486,549816,553534,631006,645676,637428,548050,642866,672578,612308,583624,575404,587188,587712,590604,584200,501328,498396,577346,602846,599544,567726,583212,571520,560764,586050,583706,602736,491862,500530,526426,613730,524648,490962,496506,523414,563228,584398,585940,602248,598906,492916,498510,512836,580748,514940,510776,511844,514102,596818,506670,583398,581670,586480,417526,520972,585142,596426,357250,510594,514972,525984,552372,448960,617812,611328,521536,491114,620836,570960,435404,267254,534928,491084,555812,491814,623932,272304,337954,624474,493184,435796,602934,176284,397572,387696,608306,625024,615630,380162,373992,537534,364706,355026,351372,369746,609732,372938,395312,609674,339328,369058,516188,534526,558914,587702,606544,452252,485862,607892,612778,574322,376580,363596,375608,385566,343392,434940,380144,332376,432076,556236,643746,672064,640260,606634,499132,643898,505082,497114,558742,600876,552362,550812,612976,395552,558092,393044,482622,604066,439624,523980,570788,515286,377352,513654,521048,590952,589368,586988,597276,534262,458432,606258,590818,610962,578040,556870,570934,610706,436382,548368,597542,603100,587560,594822,561472,553922,630086,523258,588946,483418,558552,560190,551804,573234,512170,538774,546148,545794,552870,629318,625678,548582,638832,592298,528070,552856,568296,575222,590156,556524,605114,573842,504048,570392,548512,598944,581028,592792,553966,529778,573136,599846,604366,594522,622304,638352,611164,596322,620584,600568,611202,156090,640140,515380,544980,504864,526506,544052,606608,591012,570238,604386,567688,551142,636298,598470,683408,642406,646450,665786,567138,596090,450568,638550,543818,620650,542370,428302,498210,493956,544754,604414,470722,572112,634922,619922,592336,349992,369358,347684,496106,360992,384014,317746,499238,589044,591122,313338,595824,594108,598344,599776,596244,516918,454010,453720,422776,513564,487426,581536,529564,578540,380,721382,563442,453596,418422,564350,499144,578042,388266,536448,483972,486426,587008,558074,570048,637752,550374,513390,428480,571448,572792,497052,502192,497822,343258,497848,559900,505090,455802,561130,487982,544104,409788,556784,464290,501888,571404,532486,502380,563094,493996,480804,395672,364534,526256,432432,506858,499552,505784,445294,458046,534492,499926,502788,499528,432578,502332,368884,480626,444280,438538,487188,595494,572200,474518,665300,504514,563722,438482,499818,532150,542250,395926,504946,437564,509750,522728,486538,464698,490840,505792,553254,515894,363154,527638,524174,538684,531162,553488,476602,509894,480950,439874,520124,454572,270596,465696,455312,495178,503906,491880,509974,534118,649842,542756,468100,475868,499468,539980,473560,151574,549160,561190,530050,445018,445434,483478,494294,463170,496652,329976,385838,397304,468988,532084,415100,518868,408690,521658,557688,518496,449238,506044,444136,534460,499370,508606,463002,432734,510646,596394,542102,582582,489152,501970,431194,523406,460838,373896,530294,551170,459696,505586,525204,508340,476712,602660,591138,545862,537834,490180,449274,396112,534314,516440,497100,534064,568968,460044,482320,579784,506652,526034,549504,517556,456352,459950,507164,460710,489608,145684,494192,599750,478332,524064,489056,482024,350418,499396,541478,383742,519446,599514,602046,596036,598004,492462,593518,588444,457618,503456,596866,593800,515230,478210,599274,506382,516046,605246,586494,367014,349722,543478,442998,335470,532134,496588,288838,530458,562064,577004,481486,524282,501968,487028,485428,464246,562048,566356,530572,544566,380268,434404,500024,527420,502396,627874,503726,466858,559320,562860,496242,506920,450084,545388,543218,581752,487520,434032,479836,588456,564326,406880,506594,450494,582812,643472,499412,586854,600872,591664,515750,515516,595160,555150,621616,554290,655868,602348,582618,655018,517948,587582,590038,575104,607912,550082,626846,562316,627938,634634,631564,622930,566156,566010,675762,433338,600808,545846,593354,641252,586460,525656,620522,602940,613916,513418,494458,517934,643730,618014,512892,649132,575688,645686,631896,607128,560590,545738,629990,641250,609214,624230,599032,557110,631530,615666,583564,632396,601292,618568,463066,487508,611424,616706,551036,508886,544444,492596,607412,644038,631164,571180,645756,639536,586830,604808,617926,444848,494352,547348,639688,578682,587930,618138,604942,564972,561880,571968,617616,445608,618502,547474,579980,584238,605392,574570,581766,563168,526064,698672,575168,593694,596654,553894,592336,595218,614362,601046,545044,614872,602494,616184,576286,580502,768954,604636,642024,676218,588262,559998,597148,590854,772546,763058,601452,734632,553482,546988,627620,732560,654102,571136,618800,590306,723362,710234,603290,625710,598176,586464,553238,593878,589670,599036,568026,600382,609776,553076,590988,592334,578928,558978,636790,538868,604560,569446,626624,732508,527144,579566,549332,562994,640896,552882,557744,556184,550454,660458,618762,575788,556058,564734,711036,566900,771262,582066,566058,525640,503120,447986,573130,594778,591152,567482,532348,574098,619910,547658,566688,557786,605748,538108,457466,600622,568052,528116,470552,563582,554392,583230,530232,460452,511812,520474,610668,553056,520366,564946,567242,556686,515628,577978,505384,488230,538724,559352,333490,529694,522398,554754,444454,483750,524900,501500,511626,544530,557972,549582,556832,541644,538158,527338,420980,578534,593258,574488,572122,639610,572898,562478,592074,557260,514508,505320,534212,566230,560858,594660,568356,541730,601756,581350,464368,579666,541408,598012,563844,552906,547460,547284,548942,575990,578006,594138,503142,599998,532034,558230,654072,564380,565712,595494,534358,545878,580714,535998,590148,520658,522966,618562,522842,624068,520372,411628,514880,556120,464422,569406,531760,576402,563704,524668,552826,507104,544426,406358,478796,516546,480880,513952,567738,547022,435636,510340,586938,594834,462166,526868,546436,538918,536440,597164,731856,549806,560628,576942,530036,544162,566010,536832,535548,569654,571250,560954,538118,535782,530520,541824,589866,558208,551512,528500,557776,515068,597618,539346,545240,528182,522332,551578,488052,563568,547348,562106,562908,549460,547810,519004,550618,555896,556196,554124,558280,536812,548398,488164,428810,404902,465644,476722,487178,405534,564996,492248,544182,551350,555802,458026,484244,567336,521838,536760,528024,556162,540342,729622,573044,551872,567306,575850,702458,534490,555322,613960,574210,552452,545350,575738,538290,492062,563660,563292,561608,533494,537334,521542,505724,580312,460882,382128,438814,398736,395044,420032,359720,487056,521964,520526,570400,648152,585006,768232,574110,531396,532092,612470,542138,612680,768374,603026,568086,556738,493004,527788,614838,762166,546636,535416,651708,524172,530802,473246,553020,582534,571422,585328,590044,520070,506086,572058,619928,561790,535794,410382,498922,593230,454852,409894,528010,552170,490272,512504,518866,530716,524300,412148,510236,460608,545904,476982,451946,549978,521662,576050,521268,475736,249620,465814,456336,538494,260246,332894,490180,435856,322212,443564,319340,333544,470122,336756,438896,306872,474358,329750,320998,286368,340352,370690,448528,322826,300140,271002,183786,445196,305746,278858,261500,434194,272842,310708,434036,321478,323624,429886,323072,288330,281402,331878,337922,416492,300094,435256,400064,351184,235076,365184,335770,360152,329030,417988,327072,277594,397800,310668,329996,467944,333862,299158,279616,396876,373914,315722,410452,461240,447054,554846,524408,687126,684792,663828,671918,630668,695384,705876,587284,515926,625180,693228,675646,635654,631686,634794,598409686
Transversions ,246984,319854,288872,287576,332826,302980,318272,302692,273758,292686,273966,416034,423948,422784,409738,403432,481432,338336,507448,511028,533770,310686,507772,495114,505872,485254,483194,418010,510472,424334,445342,456022,496062,471930,509324,508128,496308,486748,481004,388892,449194,489404,415344,462546,450360,527394,412172,496508,455702,464700,463732,525434,539306,537766,460178,538516,566372,515554,491494,482746,494488,494744,497740,492088,410604,408592,485890,508156,504634,478126,490044,480302,469458,493246,492156,508422,412730,413012,436570,508128,436830,401554,406954,430504,462930,491164,494162,506288,505086,403822,409036,422502,487936,424464,421208,420872,431678,501720,413968,490120,488554,493882,349212,431580,493196,501266,286340,420378,424124,434728,456626,368888,515390,509564,427394,403316,517668,471376,355818,211062,442348,401310,459500,404764,521090,217108,269056,517838,410334,346864,502530,141198,317214,311588,506724,523458,513810,306320,297834,443086,289242,281026,279060,293324,508030,297114,318840,506898,269712,290872,433752,445904,465962,488704,505008,367454,401296,511458,510816,478412,300180,289694,297300,306842,273086,346312,304342,263822,355370,469354,544290,565098,539512,511150,420204,547890,423668,418206,463172,496910,457636,456140,516378,324298,471034,320564,410780,504932,355158,436972,476094,422740,307738,429572,438966,498616,496714,494446,500438,447904,373212,505530,496528,520404,479866,461942,478264,508584,349832,453122,495106,501842,490296,495572,470894,462550,523372,435264,492414,402966,463534,467654,457680,476010,426026,451016,457118,453994,451266,523552,520556,454970,529436,491346,438090,459218,473250,480420,494120,463162,500344,479302,416326,482242,455922,498098,486518,497056,462026,435566,480368,499042,502912,498796,524242,538676,517746,506000,527934,511054,517568,139224,543928,431048,455956,418252,438730,457560,510268,492724,477742,505580,474318,454532,538228,507210,578886,546088,550238,563326,476250,503884,371238,535340,454300,525714,456732,354676,411744,411392,461048,505580,392514,478238,538382,525124,495518,278456,293144,277040,412570,288482,307354,252614,408648,496228,497704,247246,501974,500270,504620,505312,502724,426924,368478,373892,341800,426654,397196,475632,435486,475104,666,619356,475824,369806,342380,476014,411248,482734,320612,443160,399336,398694,494572,461274,473094,531760,452488,416404,345462,477362,471950,401694,413184,400918,278290,411454,463192,416718,372476,463314,399134,447114,333610,463874,381260,415744,475884,437460,414558,467492,405380,396062,317688,290688,432452,358434,414650,412238,414776,359564,374536,441218,411676,411350,411840,350014,415776,294324,394764,363490,363210,401224,510906,477104,390736,575336,414322,478070,354368,413260,438870,446398,322870,417686,355348,420860,429428,399668,385504,405184,416230,473650,419534,296832,435216,426644,448116,438280,452912,393086,422472,385346,354922,427618,376564,217294,380814,376972,411814,412986,404626,417680,439160,540848,458416,384614,386042,408866,443890,387354,125072,449756,476572,436932,361712,369426,394934,405268,378096,411594,265608,312372,325568,383012,446280,339240,424720,336422,425588,471766,427922,367408,418748,367584,438754,409294,416624,379366,352590,428554,494466,450564,495164,399952,410106,351148,434096,377464,301264,436898,455842,378680,418854,434182,418036,393672,508120,497674,444868,456812,406196,370042,319484,441144,427394,413506,441306,481352,378068,397890,492468,425820,437238,466130,424980,366640,373098,420440,373992,401378,125402,404038,505624,391978,430300,406248,400176,289434,416154,451954,318874,430798,505940,507156,501890,502544,407640,499780,494096,378814,416700,502686,499740,423298,400240,505956,417162,426852,507964,491412,284034,285836,452732,360678,270666,434000,404622,232658,441394,468696,483788,395752,435160,419682,404030,398790,383900,473096,476108,434822,453450,309278,355752,410260,432856,418684,522990,411908,380108,460176,475354,409704,411846,368968,450288,449228,478410,397532,351338,398096,491114,467718,331796,418720,366264,487990,535162,413246,491010,506560,497508,425490,424938,500540,461838,521904,456618,542742,498062,479004,544118,427484,483176,486030,473702,501994,448928,518018,463004,522256,526476,523558,517554,464862,465738,562232,346782,498250,447712,492606,534852,487698,429820,515772,498384,508368,423666,405926,429192,547446,523882,430868,542840,480080,542180,532594,506584,471754,455858,524236,546474,505582,527112,508752,465804,535444,523492,489300,530296,499392,523322,383806,400478,515868,516470,461132,424766,456346,404534,506322,533246,533108,476944,548086,542302,487284,505894,523592,370910,415312,462042,537990,484064,499968,517114,506304,477274,467608,471720,513212,361194,516606,451410,483152,483300,501060,478792,481834,466380,435568,594950,474586,491666,494440,459024,493428,496836,517532,501144,447694,520578,499988,517950,479358,479894,663794,502354,539960,579254,486310,462490,496128,487688,668024,655216,498138,634150,461480,456330,517138,629526,554916,470208,512866,487562,618228,609316,501606,526974,494544,484966,456736,489188,494682,504112,475028,506670,515026,459532,486774,493784,487848,460676,540274,445818,505794,474884,525180,627416,433688,482290,453558,467964,540660,457774,461188,458652,456360,555220,521130,476500,461578,466808,610414,470040,668692,485410,464794,437502,415436,367810,472390,492302,489686,468616,437414,473592,517254,452376,468430,461128,501954,441986,377952,498762,469068,435934,388472,466094,458846,486932,439710,381076,422424,433346,511694,456712,432620,467480,469904,463160,429940,478876,414750,402866,443262,459890,273226,435014,429248,456506,362138,395524,431952,409074,418768,448430,459902,450162,462380,449372,445992,437332,345462,479554,493176,475284,471478,530934,472984,459576,486180,460572,424042,417826,439260,467384,461176,493296,465428,447316,496806,479698,379260,478672,445518,491804,462836,453256,450942,450792,450604,475036,479576,492516,413084,495656,438834,463524,545264,461786,462264,491882,438708,450382,478424,442870,488174,426446,427020,511726,428856,519740,426382,334730,418590,460384,380266,466126,439084,473748,467904,427364,453702,418474,450700,335210,393074,422552,391738,422644,470974,451150,352342,417536,486622,490852,380154,431434,451686,443706,441192,508810,610834,454064,460330,471612,433532,445884,465968,441032,437220,465078,470942,460786,446080,439462,434948,449210,491806,455638,457930,434322,456338,420898,491308,444272,448500,438448,426714,453538,396000,470412,450258,462204,462262,455026,447326,430656,454996,456976,457300,455892,459180,439696,453920,396644,348294,324636,378774,387364,398948,325634,464606,401674,448068,459642,456224,370868,395558,467314,425780,436582,432286,456888,439540,626262,471268,453732,470400,479312,600828,434372,454970,512362,472570,457180,458082,474768,439212,404550,464086,463600,468494,438822,442372,426144,415342,480868,375638,303390,354850,317934,315580,338284,286954,398472,431714,428442,472498,547090,487304,658256,472814,443110,436150,510380,445240,508310,662762,501362,465688,457196,399062,432750,512712,652250,453464,439630,542370,427610,433444,385688,458898,483058,474466,482414,490674,424364,415952,480338,521826,465092,442078,332996,410882,489622,372150,326158,431190,454988,405696,423808,423932,439550,426418,335594,422620,378158,448756,391270,372122,459194,433950,475376,428714,394264,205906,380976,374678,445224,217816,278244,420020,358922,251798,368024,263656,277940,388642,278664,360504,255388,393050,275672,268016,240718,278838,308562,370354,265066,250250,228738,142098,364478,252336,216264,218016,355248,227006,245538,351180,268622,265488,348330,267104,240672,234258,272732,277208,347662,249022,360078,336504,290204,197566,299664,279516,293286,273652,341554,267928,234042,332816,259392,271010,388952,270818,232794,234014,332386,296630,262808,336864,379408,363826,461436,430752,578410,576298,554350,562324,525746,583032,590660,490408,417052,518074,582370,564752,529028,525664,528402,495922926
Ts/Tv ,1.252,1.253,1.251,1.254,1.244,1.268,1.263,1.246,1.245,1.253,1.246,1.210,1.212,1.215,1.219,1.222,1.191,1.234,1.190,1.186,1.189,1.249,1.188,1.188,1.190,1.196,1.189,1.218,1.209,1.217,1.205,1.211,1.201,1.207,1.186,1.187,1.187,1.190,1.206,1.228,1.215,1.208,1.194,1.192,1.182,1.203,1.202,1.192,1.206,1.183,1.194,1.201,1.197,1.185,1.191,1.194,1.188,1.188,1.187,1.192,1.187,1.188,1.187,1.187,1.221,1.220,1.188,1.186,1.188,1.187,1.190,1.190,1.194,1.188,1.186,1.186,1.192,1.212,1.206,1.208,1.201,1.223,1.220,1.216,1.217,1.190,1.186,1.190,1.186,1.221,1.219,1.214,1.190,1.213,1.213,1.216,1.191,1.190,1.224,1.190,1.191,1.187,1.196,1.207,1.186,1.190,1.248,1.215,1.214,1.210,1.210,1.217,1.199,1.200,1.220,1.218,1.199,1.211,1.224,1.266,1.209,1.224,1.210,1.215,1.197,1.254,1.256,1.206,1.202,1.256,1.200,1.248,1.253,1.244,1.200,1.194,1.198,1.241,1.256,1.213,1.261,1.263,1.259,1.261,1.200,1.255,1.240,1.203,1.258,1.269,1.190,1.199,1.199,1.203,1.201,1.231,1.211,1.189,1.200,1.200,1.255,1.255,1.263,1.257,1.257,1.256,1.249,1.260,1.216,1.185,1.183,1.189,1.187,1.187,1.188,1.175,1.192,1.189,1.206,1.209,1.207,1.208,1.187,1.220,1.185,1.226,1.175,1.196,1.238,1.199,1.199,1.219,1.226,1.196,1.187,1.185,1.187,1.187,1.194,1.193,1.228,1.199,1.190,1.174,1.205,1.205,1.194,1.201,1.247,1.210,1.207,1.202,1.198,1.200,1.192,1.198,1.204,1.202,1.196,1.200,1.205,1.198,1.206,1.204,1.202,1.195,1.195,1.202,1.225,1.202,1.202,1.206,1.207,1.205,1.205,1.204,1.201,1.197,1.194,1.202,1.209,1.197,1.211,1.183,1.203,1.202,1.194,1.193,1.199,1.216,1.193,1.202,1.202,1.192,1.187,1.185,1.180,1.179,1.175,1.175,1.181,1.121,1.177,1.196,1.195,1.207,1.200,1.189,1.189,1.199,1.194,1.195,1.197,1.213,1.182,1.180,1.181,1.176,1.175,1.182,1.191,1.183,1.214,1.193,1.197,1.181,1.188,1.208,1.210,1.201,1.182,1.195,1.199,1.196,1.179,1.181,1.195,1.257,1.260,1.255,1.202,1.251,1.249,1.258,1.222,1.187,1.188,1.267,1.187,1.188,1.186,1.187,1.186,1.211,1.232,1.214,1.237,1.204,1.227,1.223,1.216,1.218,0.571,1.165,1.184,1.227,1.222,1.186,1.214,1.197,1.211,1.211,1.212,1.220,1.187,1.210,1.205,1.199,1.216,1.233,1.240,1.197,1.214,1.237,1.215,1.242,1.233,1.210,1.209,1.212,1.224,1.211,1.223,1.217,1.228,1.200,1.218,1.207,1.201,1.217,1.212,1.204,1.219,1.214,1.245,1.254,1.217,1.206,1.222,1.212,1.219,1.238,1.223,1.211,1.214,1.222,1.213,1.236,1.208,1.253,1.218,1.222,1.207,1.214,1.166,1.199,1.214,1.156,1.218,1.179,1.237,1.209,1.213,1.215,1.226,1.209,1.231,1.211,1.217,1.217,1.205,1.211,1.215,1.168,1.230,1.223,1.212,1.229,1.202,1.212,1.222,1.212,1.207,1.248,1.239,1.216,1.207,1.245,1.223,1.208,1.202,1.220,1.216,1.221,1.216,1.202,1.184,1.217,1.233,1.222,1.216,1.223,1.212,1.221,1.178,1.213,1.230,1.206,1.224,1.220,1.225,1.207,1.242,1.235,1.220,1.224,1.192,1.224,1.222,1.215,1.226,1.182,1.212,1.223,1.208,1.208,1.218,1.220,1.221,1.220,1.227,1.192,1.206,1.203,1.177,1.223,1.224,1.228,1.206,1.221,1.241,1.214,1.209,1.214,1.207,1.210,1.216,1.211,1.186,1.188,1.227,1.177,1.207,1.214,1.240,1.211,1.208,1.202,1.210,1.182,1.217,1.212,1.177,1.190,1.203,1.179,1.218,1.245,1.233,1.206,1.232,1.220,1.162,1.223,1.186,1.220,1.218,1.204,1.205,1.211,1.200,1.198,1.203,1.206,1.185,1.187,1.188,1.190,1.208,1.188,1.191,1.208,1.208,1.187,1.188,1.217,1.195,1.184,1.214,1.209,1.192,1.193,1.292,1.224,1.200,1.228,1.239,1.226,1.227,1.241,1.202,1.199,1.193,1.217,1.205,1.196,1.205,1.217,1.209,1.188,1.190,1.220,1.201,1.230,1.221,1.219,1.218,1.200,1.201,1.223,1.228,1.215,1.184,1.211,1.231,1.220,1.211,1.209,1.216,1.226,1.235,1.205,1.198,1.207,1.226,1.210,1.230,1.194,1.202,1.209,1.195,1.186,1.189,1.212,1.213,1.189,1.202,1.191,1.214,1.208,1.209,1.216,1.204,1.212,1.216,1.214,1.214,1.211,1.225,1.210,1.214,1.202,1.205,1.206,1.204,1.218,1.215,1.202,1.250,1.206,1.219,1.205,1.199,1.203,1.223,1.203,1.210,1.208,1.212,1.218,1.207,1.176,1.180,1.190,1.196,1.199,1.191,1.186,1.198,1.188,1.197,1.202,1.173,1.205,1.184,1.177,1.196,1.179,1.176,1.193,1.193,1.204,1.182,1.207,1.217,1.185,1.194,1.195,1.198,1.193,1.218,1.200,1.208,1.184,1.198,1.178,1.179,1.204,1.196,1.180,1.199,1.190,1.185,1.189,1.195,1.176,1.195,1.195,1.184,1.202,1.213,1.203,1.234,1.197,1.213,1.200,1.209,1.208,1.200,1.207,1.208,1.208,1.174,1.212,1.208,1.207,1.207,1.200,1.198,1.187,1.199,1.217,1.181,1.205,1.190,1.202,1.210,1.158,1.204,1.189,1.167,1.210,1.211,1.204,1.212,1.156,1.165,1.207,1.158,1.199,1.199,1.214,1.164,1.179,1.215,1.207,1.211,1.170,1.166,1.203,1.187,1.210,1.209,1.211,1.214,1.192,1.188,1.196,1.185,1.184,1.204,1.214,1.200,1.187,1.213,1.179,1.209,1.195,1.199,1.193,1.167,1.215,1.202,1.211,1.203,1.185,1.208,1.209,1.213,1.206,1.190,1.187,1.208,1.205,1.210,1.165,1.206,1.153,1.199,1.218,1.201,1.211,1.218,1.213,1.208,1.207,1.211,1.217,1.212,1.198,1.211,1.210,1.210,1.207,1.217,1.210,1.204,1.211,1.211,1.211,1.209,1.208,1.198,1.206,1.208,1.212,1.201,1.193,1.211,1.203,1.208,1.207,1.202,1.199,1.207,1.219,1.212,1.215,1.216,1.221,1.218,1.217,1.215,1.227,1.223,1.215,1.226,1.222,1.214,1.213,1.221,1.204,1.205,1.207,1.206,1.219,1.206,1.203,1.209,1.213,1.205,1.211,1.224,1.218,1.210,1.213,1.209,1.216,1.211,1.216,1.205,1.221,1.211,1.211,1.212,1.224,1.211,1.215,1.216,1.218,1.220,1.214,1.214,1.218,1.213,1.205,1.206,1.218,1.211,1.212,1.204,1.200,1.222,1.224,1.211,1.218,1.212,1.214,1.210,1.209,1.221,1.225,1.209,1.219,1.201,1.220,1.230,1.230,1.208,1.221,1.222,1.211,1.217,1.205,1.228,1.218,1.212,1.208,1.212,1.218,1.222,1.228,1.216,1.205,1.213,1.236,1.222,1.206,1.212,1.216,1.221,1.210,1.215,1.216,1.174,1.198,1.211,1.218,1.223,1.223,1.220,1.215,1.217,1.225,1.225,1.213,1.217,1.206,1.219,1.220,1.206,1.199,1.225,1.204,1.217,1.222,1.224,1.216,1.214,1.216,1.205,1.224,1.216,1.232,1.198,1.216,1.216,1.218,1.208,1.225,1.205,1.210,1.216,1.216,1.215,1.216,1.221,1.208,1.231,1.231,1.247,1.229,1.231,1.221,1.245,1.216,1.225,1.215,1.200,1.218,1.235,1.224,1.214,1.226,1.229,1.221,1.217,1.229,1.165,1.216,1.216,1.206,1.201,1.169,1.230,1.221,1.198,1.215,1.208,1.191,1.213,1.226,1.216,1.215,1.215,1.199,1.216,1.215,1.224,1.218,1.207,1.227,1.260,1.237,1.254,1.252,1.242,1.254,1.222,1.209,1.215,1.207,1.185,1.200,1.167,1.214,1.199,1.220,1.200,1.218,1.205,1.159,1.203,1.220,1.218,1.235,1.220,1.199,1.169,1.205,1.218,1.202,1.226,1.225,1.227,1.205,1.206,1.204,1.213,1.203,1.226,1.217,1.191,1.188,1.208,1.212,1.232,1.214,1.212,1.222,1.257,1.225,1.214,1.208,1.209,1.224,1.207,1.230,1.228,1.207,1.218,1.216,1.219,1.215,1.198,1.202,1.212,1.216,1.207,1.212,1.223,1.218,1.209,1.195,1.196,1.167,1.214,1.280,1.205,1.211,1.200,1.210,1.208,1.217,1.202,1.207,1.196,1.198,1.190,1.221,1.201,1.211,1.218,1.199,1.185,1.293,1.221,1.212,1.289,1.199,1.222,1.202,1.265,1.236,1.197,1.219,1.234,1.210,1.198,1.201,1.217,1.219,1.198,1.205,1.209,1.189,1.210,1.190,1.219,1.201,1.228,1.202,1.224,1.221,1.186,1.195,1.198,1.218,1.203,1.233,1.285,1.195,1.194,1.261,1.201,1.218,1.216,1.229,1.202,1.217,1.188,1.188,1.197,1.195,1.200,1.193,1.195,1.198,1.237,1.207,1.190,1.196,1.202,1.202,1.201,1.207

Only known variants (i.e. the ones having a non-empty ID field): 

No results available (empty input?)
Allele frequency


Min0
Max100
Mean15.447
Median0
Standard deviation32.761
Values0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99,100
Count7466754,1006564,507680,318677,226608,171853,133810,109462,95198,84373,74818,65400,58305,51722,47774,43202,40148,36537,34443,30930,30451,28480,25861,24269,22559,22467,20711,19603,18907,17604,17552,16397,15879,15877,14408,14045,13814,13420,12964,12157,12405,11610,11373,11015,11089,10717,10300,10101,9810,9027,11127,9372,9221,8742,8503,8628,8436,8339,8190,7872,8275,7845,7695,7211,7350,7453,7580,7054,7087,7261,7047,7085,7254,7166,7068,7438,7029,7336,7502,7167,7613,7350,7410,7398,7293,7690,8050,8265,8034,7670,8140,7801,8105,8540,9180,10497,11140,11839,13567,11901,1381908

Allele Count


Min0
Max2,256
Mean91.464
Median6
Standard deviation266.473
Values0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30,32,34,36,38,40,42,44,46,48,50,52,54,56,58,60,62,64,66,68,70,72,74,76,78,80,82,84,86,88,90,92,94,96,98,100,102,104,106,108,110,112,114,116,118,120,122,124,126,128,130,132,134,136,138,140,142,144,146,148,150,152,154,156,158,160,162,164,166,168,170,172,174,176,178,180,182,184,186,188,190,192,194,196,198,200,202,204,206,208,210,212,214,216,218,220,222,224,226,228,230,232,234,236,238,240,242,244,246,248,250,252,254,256,258,260,262,264,266,268,270,272,274,276,278,280,282,284,286,288,290,292,294,296,298,300,302,304,306,308,310,312,314,316,318,320,322,324,326,328,330,332,334,336,338,340,342,344,346,348,350,352,354,356,358,360,362,364,366,368,370,372,374,376,378,380,382,384,386,388,390,392,394,396,398,400,402,404,406,408,410,412,414,416,418,420,422,424,426,428,430,432,434,436,438,440,442,444,446,448,450,452,454,456,458,460,462,464,466,468,470,472,474,476,478,480,482,484,486,488,490,492,494,496,498,500,502,504,506,508,510,512,514,516,518,520,522,524,526,528,530,532,534,536,538,540,542,544,546,548,550,552,554,556,558,560,562,564,566,568,570,572,574,576,578,580,582,584,586,588,590,592,594,596,598,600,602,604,606,608,610,612,614,616,618,620,622,624,626,628,630,632,634,636,638,640,642,644,646,648,650,652,654,656,658,660,662,664,666,668,670,672,674,676,678,680,682,684,686,688,690,692,694,696,698,700,702,704,706,708,710,712,714,716,718,720,722,724,726,728,730,732,734,736,738,740,742,744,746,748,750,752,754,756,758,760,762,764,766,768,770,772,774,776,778,780,782,784,786,788,790,792,794,796,798,800,802,804,806,808,810,812,814,816,818,820,822,824,826,828,830,832,834,836,838,840,842,844,846,848,850,852,854,856,858,860,862,864,866,868,870,872,874,876,878,880,882,884,886,888,890,892,894,896,898,900,902,904,906,908,910,912,914,916,918,920,922,924,926,928,930,932,934,936,938,940,942,944,946,948,950,952,954,956,958,960,962,964,966,968,970,972,974,976,978,980,982,984,986,988,990,992,994,996,998,1000,1002,1004,1006,1008,1010,1012,1014,1016,1018,1020,1022,1024,1026,1028,1030,1032,1034,1036,1038,1040,1042,1044,1046,1048,1050,1052,1054,1056,1058,1060,1062,1064,1066,1068,1070,1072,1074,1076,1078,1080,1082,1084,1086,1088,1090,1092,1094,1096,1098,1100,1102,1104,1106,1108,1110,1112,1114,1116,1118,1120,1122,1124,1126,1128,1130,1132,1134,1136,1138,1140,1142,1144,1146,1148,1150,1152,1154,1156,1158,1160,1162,1164,1166,1168,1170,1172,1174,1176,1178,1180,1182,1184,1186,1188,1190,1192,1194,1196,1198,1200,1202,1204,1206,1208,1210,1212,1214,1216,1218,1220,1222,1224,1226,1228,1230,1232,1234,1236,1238,1240,1242,1244,1246,1248,1250,1252,1254,1256,1258,1260,1262,1264,1266,1268,1270,1272,1274,1276,1278,1280,1282,1284,1286,1288,1290,1292,1294,1296,1298,1300,1302,1304,1306,1308,1310,1312,1314,1316,1318,1320,1322,1324,1326,1328,1330,1332,1334,1336,1338,1340,1342,1344,1346,1348,1350,1352,1354,1356,1358,1360,1362,1364,1366,1368,1370,1372,1374,1376,1378,1380,1382,1384,1386,1388,1390,1392,1394,1396,1398,1400,1402,1404,1406,1408,1410,1412,1414,1416,1418,1420,1422,1424,1426,1428,1430,1432,1434,1436,1438,1440,1442,1444,1446,1448,1450,1452,1454,1456,1458,1460,1462,1464,1466,1468,1470,1472,1474,1476,1478,1480,1482,1484,1486,1488,1490,1492,1494,1496,1498,1500,1502,1504,1506,1508,1510,1512,1514,1516,1518,1520,1522,1524,1526,1528,1530,1532,1534,1536,1538,1540,1542,1544,1546,1548,1550,1552,1554,1556,1558,1560,1562,1564,1566,1568,1570,1572,1574,1576,1578,1580,1582,1584,1586,1588,1590,1592,1594,1596,1598,1600,1602,1604,1606,1608,1610,1612,1614,1616,1618,1620,1622,1624,1626,1628,1630,1632,1634,1636,1638,1640,1642,1644,1646,1648,1650,1652,1654,1656,1658,1660,1662,1664,1666,1668,1670,1672,1674,1676,1678,1680,1682,1684,1686,1688,1690,1692,1694,1696,1698,1700,1702,1704,1706,1708,1710,1712,1714,1716,1718,1720,1722,1724,1726,1728,1730,1732,1734,1736,1738,1740,1742,1744,1746,1748,1750,1752,1754,1756,1758,1760,1762,1764,1766,1768,1770,1772,1774,1776,1778,1780,1782,1784,1786,1788,1790,1792,1794,1796,1798,1800,1802,1804,1806,1808,1810,1812,1814,1816,1818,1820,1822,1824,1826,1828,1830,1832,1834,1836,1838,1840,1842,1844,1846,1848,1850,1852,1854,1856,1858,1860,1862,1864,1866,1868,1870,1872,1874,1876,1878,1880,1882,1884,1886,1888,1890,1892,1894,1896,1898,1900,1902,1904,1906,1908,1910,1912,1914,1916,1918,1920,1922,1924,1926,1928,1930,1932,1934,1936,1938,1940,1942,1944,1946,1948,1950,1952,1954,1956,1958,1960,1962,1964,1966,1968,1970,1972,1974,1976,1978,1980,1982,1984,1986,1988,1990,1992,1994,1996,1998,2000,2002,2004,2006,2008,2010,2012,2014,2016,2018,2020,2022,2024,2026,2028,2030,2032,2034,2036,2038,2040,2042,2044,2046,2048,2050,2052,2054,2056,2058,2060,2062,2064,2066,2068,2070,2072,2074,2076,2078,2080,2082,2084,2086,2088,2090,2092,2094,2096,2098,2100,2102,2104,2106,2108,2110,2112,2114,2116,2118,2120,2122,2124,2126,2128,2130,2132,2134,2136,2138,2140,2142,2144,2146,2148,2150,2152,2154,2156,2158,2160,2162,2164,2166,2168,2170,2172,2174,2176,2178,2180,2182,2184,2186,2188,2190,2192,2194,2196,2198,2200,2202,2204,2206,2208,2210,2212,2214,2216,2218,2220,2222,2224,2226,2228,2230,2232,2234,2236,2238,2240,2242,2244,2246,2248,2250,2256
Count1,4325386,1451343,816189,553388,418440,333502,270824,230153,198263,174325,154290,137201,123261,111148,101927,94185,87867,82117,77529,71722,67481,63931,59920,56861,54222,50816,48381,46162,44092,42178,40517,38304,36484,35271,33711,32663,31414,30424,29331,28243,27397,26465,25583,24897,24225,23677,22689,22249,21302,20715,20073,19711,18962,18766,18468,17779,17276,16780,16643,15932,15652,15172,14899,14716,14535,13833,13820,13390,13102,12748,12618,12309,12095,11818,11571,11409,11264,11006,10749,10669,10603,10463,10225,10102,9957,9833,9951,9655,9602,9575,9526,9377,9456,9351,9282,9094,9219,9159,8996,8725,8734,8473,8328,8209,8016,7898,7985,7703,7683,7741,7399,7330,7293,7440,7060,6946,6863,6702,6622,6644,6602,6431,6275,6392,6262,6096,6092,6055,5998,5931,5941,5777,5736,5521,5609,5523,5545,5453,5422,5359,5312,5263,5152,5019,5077,5028,4951,4983,4879,4693,4726,4878,4774,4757,4567,4545,4539,4525,4464,4367,4478,4312,4410,4291,4199,4264,4098,4174,4207,4074,4042,4072,3865,3943,3809,3781,3790,3800,3753,3826,3748,3634,3582,3612,3559,3575,3465,3538,3569,3403,3428,3434,3350,3416,3283,3322,3274,3348,3251,3306,3249,3266,3319,3236,3208,3095,3152,3100,2977,3013,2961,3096,3016,2923,3012,2888,2911,2831,3019,2843,2886,2813,2881,2765,2694,2739,2666,2769,2748,2775,2687,2604,2648,2624,2650,2606,2537,2548,2604,2552,2556,2492,2525,2438,2361,2302,2374,2344,2441,2439,2360,2282,2333,2350,2294,2287,2248,2243,2281,2206,2140,2219,2186,2113,2058,2158,2112,2078,2096,2127,2154,2025,2022,2051,2025,2062,2010,1965,2000,2010,1947,2054,1896,1908,1957,1912,1984,1863,1881,1976,1884,1927,1920,1905,1857,1867,1823,1824,1892,1785,1820,1850,1798,1790,1886,1852,1768,1741,1796,1811,1725,1751,1780,1668,1724,1656,1650,1694,1635,1630,1710,1543,1590,1653,1643,1642,1617,1612,1615,1561,1625,1627,1530,1594,1568,1452,1566,1571,1529,1627,1570,1575,1502,1527,1466,1508,1488,1473,1498,1478,1472,1408,1484,1409,1477,1468,1469,1373,1365,1356,1367,1427,1393,1435,1338,1421,1370,1436,1381,1370,1375,1340,1330,1381,1347,1391,1364,1282,1350,1399,1314,1292,1402,1371,1327,1303,1277,1291,1353,1252,1313,1262,1271,1292,1249,1223,1261,1228,1238,1245,1202,1186,1311,1181,1230,1216,1203,1172,1146,1221,1159,1192,1152,1165,1119,1148,1139,1118,1188,1171,1182,1166,1158,1129,1143,1131,1094,1118,1142,1066,1068,1149,1132,1141,1048,1034,1067,1095,1071,1073,1047,1084,1131,1132,1056,1150,1073,1023,1013,1067,1068,997,1074,1052,1062,1053,1101,970,1021,1050,1007,1031,986,978,1032,1043,1042,1010,1047,1023,1004,969,978,923,963,925,980,958,1022,1000,970,1000,1005,884,964,949,948,963,967,940,945,930,978,929,938,959,983,954,901,885,868,910,886,894,945,945,923,877,849,898,953,918,865,902,931,920,874,861,885,881,805,845,834,832,896,839,853,840,862,872,859,872,796,831,847,851,816,816,866,874,869,850,823,819,888,834,799,856,871,853,834,827,804,816,760,806,827,777,790,758,802,789,829,745,834,816,789,760,760,797,804,795,839,741,804,739,798,729,690,799,771,734,777,733,684,787,729,764,724,754,771,775,736,734,691,660,707,696,771,660,727,693,715,674,697,689,661,729,713,717,703,683,702,697,707,709,651,692,675,707,702,705,693,701,699,669,664,665,699,647,638,671,689,710,701,623,685,656,666,683,607,656,672,663,691,664,673,645,653,632,657,672,611,612,668,623,635,637,632,653,627,665,659,646,621,633,581,623,616,638,690,589,607,662,616,608,604,592,587,601,617,620,597,597,589,573,592,628,608,602,579,597,588,592,638,583,597,635,609,593,574,585,572,555,634,584,574,617,599,573,610,571,645,572,584,601,594,620,588,551,609,582,568,558,570,557,583,593,576,582,533,518,550,547,527,561,491,528,540,523,560,580,574,531,595,551,530,562,537,536,544,586,554,548,591,582,559,545,520,556,508,521,589,564,568,543,491,556,592,519,577,483,533,535,544,531,556,546,523,506,501,547,533,484,493,511,516,479,541,522,532,536,538,498,554,492,532,501,512,506,506,507,491,498,510,543,482,530,539,505,471,505,536,529,509,482,517,518,515,527,492,487,519,478,461,494,507,493,461,515,485,509,468,497,461,470,475,487,518,463,425,500,499,485,432,488,468,463,441,497,497,446,497,499,432,482,472,468,472,474,469,455,463,505,471,494,475,457,475,419,430,460,464,449,474,475,447,447,454,487,408,475,425,436,436,416,477,443,397,413,401,415,447,391,428,491,429,451,435,416,375,455,449,415,417,423,407,435,421,441,435,397,398,455,444,413,393,393,387,388,420,428,444,401,360,450,439,400,420,400,380,379,428,382,400,397,401,401,430,394,396,426,378,396,397,392,382,374,390,385,396,368,396,398,389,378,343,407,384,357,407,381,393,359,425,372,369,399,366,355,353,368,359,349,367,384,362,323,337,357,375,404,364,349,359,369,392,361,345,357,346,354,375,341,337,307,361,356,362,304,360,357,337,334,300,361,332,368,329,357,343,347,313,342,312,350,317,306,372,317,355,334,308,353,311,338,319,345,325,305,327,325,320,297,315,314,304,350,333,294,290,311,331,306,317,318,288,308,312,295,314,288,303,314,308,319,294,302,299,295,308,288,296,316,309,263,267,288,290,290,273,251,289,305,248,237,246,243,235,247,257,225,250,217,231,199,199,199,232,211,174,182,191,206,183,168,171,175,179,132,142,145,127,105,122,115,98,100,91,61,77,61,66,51,38,39,21,23,26,13,10,6,3,3,4,3

Hom/Het per sample 




Sample_names , 88, 108, 139, 159, 265, 350, 351, 403, 410, 424, 428, 430, 470, 476, 484, 504, 506, 531, 544, 546, 628, 630, 680, 681, 685, 687, 728, 742, 763, 765, 766, 768, 772, 801, 853, 854, 867, 868, 870, 915, 932, 991, 992, 997, 1002, 1006, 1061, 1062, 1063, 1066, 1070, 1158, 1166, 1254, 1257, 1313, 1317, 1552, 1612, 1622, 1651, 1652, 1676, 1684, 1739, 1741, 1756, 1757, 1793, 1797, 1819, 1820, 1829, 1834, 1835, 1851, 1852, 1853, 1872, 1890, 1925, 1942, 1943, 1954, 2016, 2017, 2031, 2053, 2057, 2081, 2091, 2106, 2108, 2141, 2159, 2166, 2171, 2191, 2202, 2212, 2239, 2240, 2276, 2278, 2285, 2286, 2317, 2370, 2412, 4779, 4807, 4826, 4840, 4857, 4884, 4900, 4939, 4958, 5023, 5104, 5151, 5165, 5210, 5236, 5249, 5253, 5276, 5279, 5349, 5353, 5395, 5486, 5577, 5644, 5651, 5717, 5718, 5720, 5726, 5741, 5748, 5757, 5768, 5772, 5776, 5779, 5784, 5798, 5800, 5811, 5822, 5830, 5831, 5832, 5836, 5837, 5856, 5860, 5865, 5867, 5874, 5890, 5893, 5907, 5921, 5950, 5984, 5993, 6008, 6009, 6010, 6011, 6012, 6013, 6016, 6017, 6019, 6020, 6021, 6022, 6023, 6024, 6025, 6030, 6034, 6035, 6036, 6038, 6039, 6040, 6041, 6042, 6043, 6046, 6064, 6069, 6070, 6071, 6073, 6074, 6076, 6077, 6085, 6086, 6087, 6088, 6090, 6091, 6092, 6094, 6095, 6096, 6097, 6098, 6099, 6100, 6101, 6102, 6104, 6105, 6106, 6107, 6108, 6109, 6111, 6112, 6113, 6114, 6115, 6118, 6119, 6122, 6123, 6124, 6125, 6126, 6128, 6131, 6132, 6133, 6134, 6136, 6137, 6138, 6140, 6141, 6142, 6145, 6148, 6149, 6150, 6151, 6153, 6154, 6163, 6166, 6169, 6172, 6173, 6174, 6177, 6180, 6184, 6188, 6189, 6191, 6192, 6193, 6194, 6195, 6198, 6201, 6202, 6203, 6209, 6210, 6214, 6216, 6217, 6218, 6220, 6221, 6231, 6235, 6237, 6238, 6240, 6241, 6242, 6243, 6244, 6252, 6255, 6258, 6268, 6276, 6284, 6296, 6390, 6396, 6413, 6424, 6434, 6445, 6680, 6739, 6740, 6744, 6749, 6750, 6805, 6806, 6814, 6830, 6897, 6898, 6900, 6901, 6903, 6904, 6907, 6908, 6909, 6911, 6913, 6915, 6917, 6918, 6919, 6920, 6922, 6923, 6924, 6926, 6927, 6929, 6931, 6932, 6933, 6938, 6940, 6943, 6944, 6945, 6951, 6956, 6957, 6958, 6959, 6960, 6961, 6963, 6966, 6967, 6968, 6969, 6970, 6971, 6973, 6974, 6975, 6976, 6979, 6981, 6982, 6984, 6986, 6987, 6989, 6990, 6992, 6997, 7000, 7002, 7003, 7008, 7013, 7014, 7025, 7026, 7028, 7031, 7033, 7036, 7058, 7061, 7062, 7063, 7064, 7067, 7068, 7071, 7072, 7077, 7081, 7092, 7094, 7096, 7102, 7103, 7106, 7107, 7109, 7111, 7117, 7119, 7120, 7125, 7126, 7127, 7130, 7133, 7138, 7143, 7147, 7158, 7160, 7161, 7162, 7163, 7164, 7165, 7169, 7177, 7181, 7183, 7186, 7192, 7199, 7202, 7203, 7207, 7208, 7209, 7213, 7217, 7218, 7223, 7231, 7236, 7244, 7248, 7250, 7255, 7258, 7268, 7273, 7276, 7280, 7282, 7287, 7288, 7296, 7298, 7305, 7306, 7307, 7314, 7316, 7319, 7320, 7322, 7323, 7327, 7328, 7332, 7333, 7337, 7342, 7343, 7344, 7346, 7347, 7349, 7350, 7353, 7354, 7356, 7358, 7359, 7372, 7373, 7377, 7378, 7382, 7383, 7384, 7387, 7394, 7396, 7404, 7411, 7413, 7415, 7416, 7417, 7418, 7419, 7424, 7427, 7430, 7460, 7461, 7471, 7475, 7477, 7514, 7515, 7516, 7517, 7520, 7521, 7523, 7525, 7529, 7530, 7566, 7568, 7717, 7757, 7767, 7917, 7947, 8037, 8057, 8077, 8132, 8171, 8214, 8222, 8227, 8230, 8231, 8233, 8234, 8235, 8236, 8237, 8238, 8239, 8240, 8241, 8242, 8243, 8244, 8246, 8247, 8249, 8256, 8258, 8259, 8264, 8283, 8284, 8285, 8290, 8297, 8306, 8307, 8311, 8312, 8326, 8334, 8335, 8337, 8343, 8351, 8354, 8357, 8365, 8366, 8369, 8376, 8386, 8387, 8419, 8420, 8422, 8424, 8426, 8427, 8464, 8483, 8699, 8723, 9027, 9057, 9058, 9067, 9069, 9070, 9075, 9078, 9079, 9081, 9084, 9085, 9089, 9091, 9095, 9099, 9100, 9102, 9103, 9104, 9105, 9106, 9111, 9113, 9114, 9115, 9121, 9125, 9128, 9130, 9131, 9133, 9134, 9298, 9312, 9314, 9321, 9323, 9332, 9336, 9339, 9343, 9352, 9353, 9363, 9369, 9370, 9371, 9380, 9381, 9382, 9383, 9386, 9388, 9390, 9391, 9392, 9394, 9395, 9399, 9402, 9404, 9405, 9407, 9408, 9409, 9412, 9413, 9416, 9421, 9427, 9433, 9436, 9437, 9442, 9450, 9451, 9452, 9453, 9454, 9455, 9470, 9471, 9476, 9481, 9503, 9506, 9507, 9508, 9509, 9510, 9511, 9512, 9513, 9514, 9515, 9517, 9518, 9519, 9520, 9521, 9522, 9523, 9524, 9525, 9526, 9527, 9528, 9529, 9530, 9531, 9532, 9533, 9534, 9535, 9536, 9537, 9539, 9540, 9541, 9542, 9543, 9544, 9545, 9546, 9547, 9548, 9549, 9550, 9551, 9552, 9553, 9554, 9555, 9556, 9557, 9558, 9559, 9560, 9561, 9562, 9564, 9565, 9567, 9568, 9569, 9571, 9573, 9574, 9576, 9577, 9578, 9579, 9581, 9582, 9583, 9584, 9585, 9586, 9587, 9588, 9589, 9590, 9591, 9592, 9593, 9594, 9595, 9596, 9597, 9598, 9599, 9600, 9601, 9602, 9606, 9607, 9608, 9609, 9610, 9611, 9612, 9613, 9615, 9616, 9617, 9619, 9620, 9621, 9622, 9624, 9625, 9626, 9627, 9628, 9629, 9630, 9631, 9632, 9633, 9634, 9635, 9636, 9637, 9638, 9639, 9640, 9641, 9642, 9643, 9644, 9645, 9646, 9647, 9648, 9649, 9651, 9653, 9655, 9656, 9657, 9658, 9659, 9660, 9661, 9663, 9664, 9665, 9666, 9667, 9668, 9669, 9670, 9671, 9672, 9673, 9676, 9677, 9678, 9679, 9680, 9681, 9682, 9683, 9684, 9685, 9686, 9687, 9689, 9690, 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Reference , 7482760, 8558846, 8135656, 8511381, 8641394, 8545506, 8786203, 8690626, 8103745, 8418000, 8239449, 9243350, 9830446, 9828708, 9780593, 9765002, 9847173, 9811971, 9904201, 9891738, 9774329, 8872184, 9882957, 9856488, 9890094, 9844015, 9798415, 9834794, 9255189, 8042830, 8479784, 8768942, 8960669, 9420139, 9891032, 9882390, 9846898, 9835581, 9653833, 9333259, 9423225, 9508267, 8974120, 9006617, 9116079, 9702308, 8763154, 9617579, 9441234, 9157005, 9166287, 9584745, 9672278, 9376402, 9077112, 9611563, 9684381, 9385898, 9834462, 9832752, 9835655, 9849767, 9848631, 9822971, 9815128, 9800731, 9811903, 9881211, 9883286, 9768264, 9842325, 9763163, 9669678, 9845119, 9835080, 9881024, 9854740, 9212889, 9573652, 9403337, 9507713, 9765063, 9770630, 9128068, 9363270, 9850823, 9824738, 9886621, 9863881, 9758139, 9779727, 9837679, 9844914, 9840825, 9826315, 9835491, 9741492, 9874239, 8818686, 9846160, 9842380, 9840937, 8651982, 9329426, 9829672, 9873780, 7813068, 9826147, 9846737, 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Missing , 5110251, 3942711, 4406094, 4029664, 3846304, 3974983, 3714838, 3833129, 4456320, 4117304, 4320393, 3147473, 2551501, 2553848, 2616723, 2639951, 2460351, 2670537, 2369763, 2378090, 2469953, 3640044, 2390602, 2435491, 2388932, 2451362, 2505434, 2554010, 3017479, 4341887, 3877365, 3576040, 3331189, 2895874, 2382456, 2391082, 2441425, 2463504, 2648830, 3083889, 2921406, 2791114, 3420324, 3334085, 3239345, 2543968, 3630626, 2676924, 2896834, 3179476, 3169244, 2666322, 2560700, 2863583, 3268361, 2624506, 2518232, 2888752, 2459094, 2471307, 2455158, 2442067, 2438484, 2468727, 2582913, 2599533, 2489908, 2392695, 2397465, 2542988, 2452594, 2544188, 2650141, 2448491, 2459175, 2393578, 2533447, 3180613, 2786967, 2868871, 2855509, 2643072, 2630525, 3243568, 2964280, 2442713, 2464230, 2391156, 2414478, 2646922, 2618743, 2545627, 2452594, 2540340, 2559572, 2549441, 2624606, 2409794, 3574483, 2448606, 2454404, 2449430, 3825462, 3038542, 2462415, 2410631, 4735835, 2559546, 2534184, 3145866, 2968813, 4162498, 2586162, 2573013, 3304560, 3676401, 2570946, 2956137, 4242815, 3055448, 3181799, 3557555, 2889575, 3761790, 2561751, 4012712, 4747479, 2642489, 3062865, 3365568, 2604577, 3406925, 3942070, 3765096, 2582255, 2566837, 2557477, 4329514, 4280061, 3123454, 4143914, 4316939, 3801905, 3627079, 2575648, 3986715, 4233739, 2603896, 3646107, 3719073, 3785804, 3286933, 3244795, 3056508, 2740810, 3166690, 4684385, 2909003, 2521500, 3136151, 4128013, 4371221, 3863030, 4155463, 4672669, 3523293, 3978060, 4849830, 3474385, 3578002, 2883083, 2820669, 2910334, 3201865, 4642907, 2799978, 3549147, 3530788, 2966556, 2813687, 3065888, 3236376, 3045101, 5269676, 2919293, 5064370, 4008660, 2813857, 4810878, 3722782, 2710679, 3061049, 5990309, 4345064, 4216489, 3274912, 3216810, 3315080, 2883611, 3450811, 4790533, 2733116, 2734673, 2779192, 2767188, 3063448, 2894949, 2789786, 5227378, 3055321, 2778828, 2716917, 2725992, 2786186, 3178281, 3060736, 2633202, 3611594, 2961041, 3396327, 3145296, 3166509, 3113042, 2795992, 3259072, 3093257, 3306817, 3136233, 2952436, 2640134, 2626875, 3057802, 2590637, 2759929, 3277594, 3145249, 2871030, 2906541, 2911597, 2992855, 2660230, 2908939, 3029566, 2801544, 3255782, 2732995, 2922815, 2898940, 3392057, 3194044, 2983649, 2860910, 2953511, 3229832, 2924308, 2855451, 2976820, 3034022, 2916030, 3106164, 3011990, 2214067, 2829943, 3616923, 3215620, 2684675, 2870586, 3089854, 2684771, 2858850, 2781291, 2866938, 2986395, 3102741, 2855921, 3298039, 2599546, 2766767, 2843966, 2790648, 3483493, 3049972, 4214185, 2692315, 3447261, 2918101, 3715467, 5209038, 3783028, 3371626, 3768010, 2690740, 4549555, 3163932, 2599664, 2704846, 2727575, 4424080, 4093386, 4409505, 3334752, 4036773, 4151617, 4881470, 3611461, 2445175, 2438074, 4761861, 2427989, 2425491, 2413782, 2405833, 2420140, 2719413, 3455512, 3802184, 5781686, 4417900, 2874515, 2670323, 3156516, 2731665, 1853125, 3057635, 3590792, 3125273, 5697271, 3499723, 3746312, 2610471, 3873187, 3086690, 3668832, 3703400, 2446503, 3640873, 3535165, 2619907, 2676336, 3073397, 3560697, 2748665, 2745348, 3079198, 3728211, 3097488, 4701631, 3387664, 2858166, 3366305, 3624964, 3469858, 3679615, 3106832, 5780770, 3245051, 4513055, 3229822, 2884422, 3273547, 3547948, 2848472, 3306257, 3336878, 4585722, 4170639, 3075360, 3770028, 3665873, 3264303, 3363942, 3470486, 3373011, 2681350, 3169306, 3158028, 3495978, 2453648, 3205668, 3332996, 3202043, 3441807, 3659063, 2716454, 2882900, 2913191, 2662018, 3182508, 3424406, 2918973, 4263639, 3413180, 3445513, 3490564, 4312855, 3394685, 3618393, 3646825, 2572824, 3816461, 3537625, 3510162, 3428110, 2892370, 2821773, 3483906, 3258284, 3137323, 3624913, 3251386, 2872938, 3318234, 3299793, 2970100, 3515815, 3097486, 3642059, 4818857, 3956684, 3725615, 3382928, 3148516, 3491117, 3488395, 3379319, 2843035, 3140866, 3842994, 2798340, 2640279, 2870173, 3358931, 1882265, 2838997, 3070151, 3345816, 4052759, 3940277, 3047016, 3865215, 4102033, 2790762, 4693800, 3914427, 3286011, 4030527, 2934837, 3644134, 3282790, 2889937, 2666075, 2844582, 2943770, 4052979, 3137822, 4090293, 2882842, 3089915, 3197497, 4095550, 4403920, 2855010, 3143543, 3190751, 3107787, 3677704, 4205803, 3431137, 3127423, 4145768, 5320747, 3008125, 3199298, 3855422, 3214551, 3506214, 3327846, 3226319, 2398917, 2440237, 2910296, 2859557, 3052478, 4019567, 5100966, 3189144, 3112490, 3460802, 3456761, 3014780, 3868415, 3241774, 3063599, 2972416, 2727974, 2959271, 3259659, 2867067, 4263568, 3203863, 3951653, 3778985, 3674461, 3967202, 2410135, 3055996, 2976503, 3092352, 4364142, 5581058, 3336706, 2734895, 3920984, 3065698, 2468189, 2452345, 2412061, 2404181, 2744986, 2428553, 2429963, 3352750, 3263962, 2412539, 2425833, 3163279, 3107378, 2477956, 3456882, 4121224, 2932074, 3164658, 6304642, 4188337, 2754518, 3522288, 4836853, 3431875, 2820079, 5382260, 3590751, 2988525, 3001154, 3433261, 2939148, 2941649, 4097110, 4291083, 4067967, 3099114, 3171512, 3108899, 3361437, 4116182, 3395309, 3360493, 3118858, 3703051, 2562156, 3625549, 3244021, 2937883, 2770106, 4146714, 3130832, 3885055, 3332058, 3568659, 2761189, 3402650, 2992968, 4336495, 2956800, 2811700, 4573235, 3418649, 3507999, 2979731, 2883368, 2990112, 2565153, 2402229, 2444134, 2530209, 2536673, 2491410, 2935001, 2844053, 3264131, 2715762, 3014319, 3133888, 2759653, 3927908, 3138633, 3232260, 3359807, 2862876, 3213231, 2929512, 3248235, 2776721, 2779885, 2746608, 2759636, 2986502, 3283576, 2609818, 4420417, 3008589, 3172967, 3198853, 2762613, 3027433, 3465058, 2778527, 2854482, 2817210, 3434900, 3298310, 3160236, 2892696, 2937014, 3625924, 2613782, 2842964, 2594735, 2585138, 2772709, 3297850, 2993502, 2661170, 2828393, 2764586, 2825666, 2797821, 3167918, 2759797, 2809458, 2936173, 2621887, 2762617, 2800175, 4474501, 3100156, 2846436, 2641650, 3393730, 3687350, 3244762, 3807503, 2788352, 2620074, 2853009, 2833997, 2805608, 2780809, 2806444, 2721624, 2701690, 4408472, 2832848, 3258887, 2655967, 2927524, 2605066, 2745965, 2766729, 3276448, 3069075, 2808044, 2846324, 3000399, 2994853, 3345526, 2942149, 2931580, 3021262, 3205511, 2893249, 3199472, 3404490, 3075030, 3084363, 2872090, 2986828, 3027227, 2883984, 2961470, 3055305, 2906087, 3007666, 3557871, 2823207, 3413383, 3158172, 2920858, 3205986, 2942007, 2923152, 2963105, 2978427, 3325640, 2868824, 2985589, 3205605, 3297803, 2903496, 3664410, 3110500, 3195665, 2845105, 3177467, 3106930, 3154965, 3032704, 3082160, 3403293, 3291308, 2908086, 3154938, 2992288, 3155747, 3168253, 3026205, 3321208, 3221590, 3127591, 3071785, 3094361, 2892260, 2904260, 2948095, 3196469, 3055413, 2974426, 3185558, 2982864, 2880327, 2966108, 3240349, 3109040, 2856873, 3219288, 2865245, 3135772, 2992854, 3032411, 3101388, 2668410, 2879189, 2973358, 3149222, 3198148, 2866814, 3628420, 2922673, 3270856, 2847975, 2833123, 3426378, 3864061, 3540918, 3291607, 3077417, 3101244, 3233493, 3251445, 3180530, 2900321, 3590915, 3376173, 3218794, 2994839, 3232696, 3323644, 3097869, 3220273, 3756026, 3817459, 3262213, 3400922, 2997340, 3605521, 4193526, 3355524, 3276618, 2941794, 3437684, 3532093, 3238475, 3211928, 2931940, 3694774, 3309570, 3030322, 3209388, 3354423, 3183184, 5611106, 2951242, 3452657, 3177661, 3656764, 2993409, 3315132, 3501091, 3046137, 3095080, 2938902, 2946888, 3039808, 3180070, 3284830, 3469975, 3403341, 3016635, 2941302, 3053530, 3165631, 2691496, 3233482, 2934985, 2941723, 3056514, 3618133, 3517398, 3177279, 3009489, 2852547, 2818286, 2859405, 3320341, 2809043, 3000358, 3689960, 2937871, 3133391, 2860313, 3142315, 3163623, 2779996, 2939369, 2990373, 2754281, 2827201, 2657490, 3776609, 2827730, 3116559, 2836887, 2799456, 2821957, 2992696, 2920954, 2984241, 3102923, 2992136, 3252843, 3036030, 3278648, 3516050, 2807601, 3320378, 2844370, 3592741, 3565563, 3184148, 3213983, 3731910, 2838147, 3084885, 2783444, 2704107, 3009315, 2940750, 3356591, 3544258, 3204635, 3081848, 2993249, 3259879, 3281128, 3360884, 2889272, 3314671, 3374300, 2643490, 2732127, 2915877, 3234224, 3750284, 3586523, 3134942, 4234621, 3101032, 3648603, 2708624, 2750023, 2965539, 2860057, 2799301, 2792009, 2728838, 2780095, 2595443, 2753964, 2738159, 2803478, 2918203, 2724862, 2820018, 2810555, 2566252, 2888494, 2809188, 2819814, 2684694, 2801768, 2793494, 2868684, 3037708, 2808270, 2971476, 2528147, 2676642, 2847529, 2857454, 2817205, 3004372, 2790029, 2761356, 2857717, 2875027, 2914235, 2793293, 2866064, 3042992, 3266224, 3541201, 3001863, 3510418, 3529770, 2991445, 4040531, 3156690, 3418157, 3359326, 3017337, 3275489, 3750030, 4127877, 3196187, 3211762, 3025139, 3287740, 3399214, 3485105, 3612500, 3112803, 3322107, 2994609, 3307505, 3203289, 3404931, 3291949, 3184375, 3097701, 3156402, 3794174, 2980353, 3115797, 3222131, 3078461, 3023639, 3302249, 3141610, 3317330, 3159877, 3337996, 3078113, 4468239, 5073275, 5022348, 5135959, 4946041, 4898820, 5757269, 4061669, 3629779, 3556732, 3163692, 3957016, 3199550, 3230410, 3004678, 3061329, 3343873, 3107057, 3305929, 3019791, 3185932, 3190436, 3314300, 3445291, 3743436, 3395270, 3188571, 3402336, 3183206, 3349031, 2583666, 3198843, 3358598, 3001246, 3385323, 2913351, 3489158, 3000657, 2888444, 3091614, 3637357, 3199386, 4531341, 3287140, 3210059, 4945369, 3383844, 2703458, 4040868, 4009142, 3214991, 2869194, 3100206, 2809578, 3330413, 3160609, 3235114, 4750962, 3439529, 3554000, 3031739, 3532666, 3669761, 2801528, 3126319, 2807223, 3175359, 4494957, 6425968, 4453396, 3978893, 5174879, 6499286, 5749709, 5430185, 4134865, 6241843, 4344888, 5484481, 5930881, 4091587, 5878612, 4188512, 6361537, 3897165, 5968775, 5676101, 6086477, 5534455, 4923618, 4075580, 5834960, 6018362, 6511136, 7761026, 4023121, 5984608, 7195389, 6790344, 4232202, 6475451, 6384071, 4133433, 5674611, 5199060, 4186459, 5507528, 6030841, 6357525, 6055859, 5624255, 4668693, 6038910, 4487159, 4680847, 5035839, 6464683, 4123366, 4691032, 4190125, 5180161, 3857818, 5830690, 6196843, 4943301, 6162304, 5381721, 4088302, 4236357, 6915968, 6708130, 4624412, 5561823, 5598281, 3811130, 3853957, 3921959, 2749715, 3012234, 2746983, 2713460, 2720006, 2734529, 2700837, 2549089, 2599829, 2638076, 3680561, 2531581, 2612968, 2714095, 2471860, 2485683, 2474524

Codon changes

How to read this table:
- Rows are reference codons and columns are changed codons. E.g. Row 'AAA' column 'TAA' indicates how many 'AAA' codons have been replaced by 'TAA' codons.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - AAA AAC AAG AAT ACA ACC ACG ACN ACT AGA AGC AGG AGT ATA ATC ATG ATT CAA CAC CAG CAT CCA CCC CCG CCT CGA CGC CGG CGT CTA CTC CTG CTT GAA GAC GAG GAT GCA GCC GCG GCN GCT GGA GGC GGG GGT GNG GNT GTA GTC GTG GTT TAA TAC TAG TAT TCA TCC TCG TCT TGA TGC TGG TGT TNG TTA TTC TTG TTT
-   380 407 434 502 199 148 129   278 190 154 130 209 242 185 274 232 453 120 225 304 204 75 113 326 78 43 62 92 109 156 116 197 752 225 387 679 192 121 98   248 328 142 109 328     186 117 139 259 132 143 79 265 399 196 136 587 100 75 110 130   174 226 176 302
AAA 2,382 1,243 5,002 13,710 6,298 3,739 3 7   17 8,314 10 13 10 4,714 5 18 17 4,414       1 1                     8,358       1         3                   1,598       1 3 3   1   1       1    
AAC 1,493 5,992 254 4,125 25,258 13 2,968 1   12 15 6,388 5 12 24 2,307 11 22 4 2,008                             5 4,144     1                             1 2,559     2     1           1      
AAG 2,156 27,140 4,775 292 7,635 37 4 4,546   12 37 5 6,326 7 28 7 4,869 10 3   3,106           2               11   5,575 2 1   1     1                   11   1,540 2 1   1 1 2     1     1 1  
AAT 1,482 4,738 13,546 3,511 348 20 6 12   3,643 25 11 3 8,981 32 14 10 4,395 6     2,788       1   1     1 2     9     6,598 2                       1 1   5     4,020         1 1       1      
ACA 1,042 4,242 72 5 12 240 3,968 8,086   6,887 3,150 5 6 8 10,101 15 12 11   5     1,549             1 1       1 6     5,635                     2 1   1 2 4     3,333       2         1   1  
ACC 634 6 2,567 5 11 4,966 127 3,425   12,197 4 2,165   5 4 5,843 5 8 1 3   1   1,005                     1 1       2,945                   1         2       1,873               1      
ACG 586 5 45 2,241 2 12,226 2,641 78   4,276 3 6 1,378 3 3 11 7,720 6 1 2         710   1       1   1 1   1         2,469                                     1,510             1      
ACN                                                                                                                                            
ACT 1,020 16 69 10 4,263 6,426 7,420 4,542   273 2 15 5 5,006 13 10 11 9,748   2           1,669     1   1   1     10     2       4,885   2 1       1     1   1     4 2 2 3,953 1   1            
AGA 1,143 11,068 7 124 10 2,547 2 11   9 263 1,554 8,252 2,218 3,666 4 19 11     6     1     4,920               2   4             3,591                       5 3 1       893             1  
AGC 621 9 6,962 37 6 6 2,745 6   3 2,266 86 1,867 12,081 3 2,130 6 2                 1 1,115             1   2   1         1 2,394               1     2             1,900              
AGG 582 9 2 6,469 4 4   1,582   1 10,233 1,151 90 1,656 9 4 2,063 4 1   2               2,339 1             3               1 1,423       1           1               1,371     1 1    
AGT 1,005 15 17 60 10,306 9 4 1   4,645 2,203 7,088 1,768 218 6 5 23 3,332     6                 1,767             2 3 1         1 2   3,928                 2                 3,280          
ATA 897 2,046 5 3 71 3,976 9 4   15 1,740 3 5 21 240 3,827 3,912 7,347     1 2                 1,978       1   3 10         1   3         6,268   1 3     1 23 2   1             2,963 1   2
ATC 911 9 1,457 5 91 9 3,868 1   16 3 1,171   13 8,116 140 2,589 20,459 2   2 1                   2,174       1   7           2     1       6,334     1     3 1     1 2           2,126    
ATG 1,690 56 7 2,573 305 12 8 5,463   24 21 5 1,719 25 11,964 2,831 207 5,736 1     10 1                   3,084 1       7 1                         6,264   1   1 12     1             1   4,721 1
ATT 1,214 19 3 4 2,960 8 2 6   5,673 7 5 2 2,222 7,212 11,134 2,800 397       1           1           2,924       4           2           1     9,251       7     1 2                 3,608
CAA 1,329 5,514 3     4           2     1 1     498 2,459 9,528 3,429 2,080 5 1 6 4,620 3 1 3 3,552 11 5 8 5,273       6                             3,317       2                        
CAC 502   1,978     2                         2,142 76 1,921 10,655 21 812   4 7 1,723   4 7 1,396 3 7   1,183     1                               4,215     1                        
CAG 801     2,890   2                   1     13,408 2,200 149 3,557 19   1,465 9 7 5 2,611 1 8 4 2,866 10     2,829   5       1                         2,734                            
CAT 916       3,353 6                 2 4   1 2,471 7,026 2,088 243 23 1 6 1,394 10 1 2 3,613 22 5 8 2,107   1 1 1,854 2                           2       7,169   2   2 2 1         2    
CCA 1,031         2,566 3                       3,495 23 3 9 229 3,491 8,446 6,369 1,992 5 3 3 7,110 21 13 8 1       2,501   1   1               1             9,143 7       1         1   1
CCC 479   1       1,071                       3 818 1 1 2,784 129 2,284 7,504 1 569   5 2 2,613 1 8           986                                     3,528                      
CCG 543   2   1   4 1,590                     6 11 2,114 8 16,024 3,510 88 4,918   2 1,516 1 3 6 7,810 5             1,269                                   3 4,945                    
CCT 1,189           6     2,731       4         20 13 11 3,697 6,446 5,854 4,675 346 8 4 1 2,671 15 27 8 8,001           5     2,276   1   4                       4   9,912 2         2 1    
CGA 379   2         1     3,647       1 1     6,668 2 16 3 843 5 15 4 75 1,023 3,251 1,904 1,276 2 15               4     1,367                               2 2 2,066 1              
CGC 228             2       941             1 3,731 5 2 1 595 5   1,286 33 1,466 5,229   931 4 2             1       690                             1     3,369              
CGG 294   1   1     1         2,571               4,996 1     747 1 5,231 1,189 46 2,005   1 1,240 3       2     4         925                                   3,907            
CGT 500             8           1,787         6 3 21 7,070 3 4 19 1,199 2,495 4,211 1,939 91 1 4 14 2,277             5           1,247         3               5         6,512     1 1  
CTA 549                 3         2,513       1,641 1 4 10 1,508   5 18 923 2   2 134 2,877 5,399 5,048                 2             2,612                 1   5           9,436      
CTC 805   2 2           6           3,480     11 1,345 3 14 4 1,494 2 22 4 864 6 8 5,451 170 4,432 17,508   1             3               2,954             3     7   1         7,000    
CTG 421 1               1             2,572   6 6 1,217 11 4   1,289 8 3 1 721 11 9,836 3,202 59 4,289                 2                 1,886     1         2 1       2       9,805  
CTT 1,185   2             3           1 1 5,516 16 8 7 2,429 5 3 1 2,272 3 1 4 2,338 6,670 9,911 4,696 442                                 2   3,980 1     1       6                 10,540
GAA 2,648 19,917   4   1   1     21             1 5,486   3           7   1           866 6,229 14,432 6,978 2,907 9 7   15 6,968 6 6 38     3,686 4 18 34 2,094     1         7     1     7    
GAC 1,046   8,906     1         8           1     1,876 1           2   1       1   6,179 177 4,501 21,323 11 1,305 3   6 26 4,138 3 10     4 1,457 4 11   2,329       1 1   5                
GAG 1,833     14,848 1           13   3     2         4,438   1     2 2   3         1 27,369 6,328 319 8,267 24 7 2,871   5 71 4 5,355 3     27 9 3,846 13     1,867         1 24                
GAT 2,334 2 3 3 20,586 1   1     17   1   1   1 1     1 3,942   1 1   4           2   6,459 17,220 5,347 702 19 2 8   3,071 71 7 2 8,572     38 7 9 3,805 2 1 1 6,832     1   9   2         2 2
GCA 952     1   10,276   2       2                 1   2,289         1             3,072 7 13 12 204 3,926 8,071   7,534 3,159 29 3 7     8,982 10 7 3   1     4,260         1 1       1 2  
GCC 495   1       6,240         2           1     1     1,306       1         1   7 1,085 2 12 4,294 96 3,487   11,792 4 1,792 3 3     2 5,454 6 6           2,853       1              
GCG 453         2   5,416       2     1                   1,159 1                   10 1,654 6 16,060 3,830 75   5,664 2 16 2,023 3       8 8,732 3             2,016     3              
GCN                 1                                                                                                                          
GCT 1,148     1   2       14,534   9                           3,028     2           22 10 11 3,444 7,527 9,558 6,504   333 4 29 1 5,252     7 18 11 12,694       1       7,206   1              
GGA 1,569     3             10,537   8                 1         2,384               10,385 12 37 17 2,341 5 20   8 277 3,961 10,629 5,626     2,745 11 17 11         1       1,376   1       1   1
GGC 625                     4,886 2 1     2                     1,040 1           2 4,273 8 9 2 1,569 5   5 4,275 65 3,371 11,246     4 1,129 3 5                   1,532 2            
GGG 738     3   1             4,771           1                 1 1,316           3 6 4,229 5   2 1,316   4 11,450 2,796 158 4,423     2 5 1,462 7         3           1,480       2    
GGT 1,296     1                 6 11,082   1   1               1     4 2,376   1 1   18 5 18 9,066 10 4 12   3,531 5,093 9,324 5,004 271     9 6 22 3,525             2 1     2 4,364          
GNG                                                                                                 1                                 1        
GNT                                                                                                                                            
GTA 658         1               3 7,952   1                           2,166   1   1,435 4 6 16 2,749 1 2   4 945 2   22     166 2,861 6,010 5,509 1   1   2             2   2,910     1
GTC 635   1 2                   3   9,402                           5   2,462     5 790 13 11 1 3,219 1   2 3 857 1 18     4,053 112 3,826 13,710 2   1   1       2     2     2,888   1
GTG 930                         12     10,079       2                 4     3,511   10 5 1,809 17 13 1 3,891   6 1   1,713 28     14,405 5,071 135 7,783             2         4       4,337  
GTT 1,500     2 1   3         1   7       20,354             2         3     1 4,802 17 4 7 2,145 8 10 2   6,871 15 3 4 2,726     6,514 10,326 6,039 386     1 1               7         5,983
TAA 298 187     1                   1       211                       2   2   134                                     200 105 406 136 108       418         194   1 2
TAC 676   1,845                       6     1   2,230   2                 1       1 1,080   3         3 2     2     2       1,001 99 828 15,814 21 909 6 2 2 2,022 1 4   69 2,909 6 9
TAG 138     70               1     3           139                               51                                 537 101 31 127 2   68   5   120 1   9   116 3
TAT 998       2,703           1       10             3,111   1   2       1 6             1,473               1       4       918 10,493 640 291 13 5 3 2,012 14 4 1 3,493   97 7 3 4,068
TCA 1,310         2,991                   7             3,906     1           1     2       2,719               1       6     1,236 16 4 10 303 4,613 9,753 6,613 785 8 4 8   9,250 57 8 10
TCC 797           1,686       1         3               2,268 1 1       1   4       2       1,532     2                   1 5 1,662 4 9 4,322 148 3,928 14,094 3 1,219 2 2   3 6,040 3 3
TCG 658 2           1,637                     1           1,949                 1             1,251                 1 3     2 8 707 13 16,922 4,114 84 6,017 1 2 1,357 7   5 39 9,985 5
TCT 1,989     1           4,000           6   2       1       4,834 1         4   2       7 1       3,473 1           2 1     5 29 5 5,235 7,136 10,093 7,425 519 4 16 6 4,008   14 103 13 11,451
TGA 315                   105     2     1                   213                                 97   1           2   924   5 1 107   1 3 94 84 214 92   169   15 1
TGC 421       2             1,085     2   1 1                   989       1 2         1         1   663             2   3 2,653 2 6   1,141 4 5 518 70 883 8,811   1 1,291 57 9
TGG 652                 2     949       7 1               3     1,433       2   2                   1 776           2   2 5 2,288 21 3   1,181 3 2,369 952 91 1,263     2 2,052 4
TGT 725     1                   1,709     4         1           1   1,842     4         3                 1,151         2 2 3 6 6 4,845 9 2 10 2,444 555 6,305 870 137   1 2 62 2,602
TNG                                                                                                                                            
TTA 909         1         1     2 2,775 1   2                         6,443     7 2                             2,441     2 971 5 5 19 2,688 1 4 20 560 2 1 12   236 2,332 8,275 3,434
TTC 1,194     1 3                   2 2,088   4                           3,362   9       2                         1,974   2 5 2,178 3 18 2 2,518 5 28 2 1,097 6 7   3,407 159 2,708 24,424
TTG 1,075       4                     2 3,692 4                   3     3   9,743 5       2                           2,640 5 3 2 938 15 10 4 3,692 25 1 3 1,687 13   17,767 3,813 130 6,085
TTT 1,658 1   1 1         3     1 5     1 3,360       3       2     1         4,109 1                   1               2,956 19 3 8 3,846 8 2 1 3,259 6 4   2,099   3,239 12,605 2,820 946

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
* 2,620 695 56   177   185 6 98   4 257 508 1 1   350 318 292   2 334 470
- 311   20,351 659 205 904 1,139 528 907 424 659 814 928 274 909 718 678 595 1,681 754 701 110 408
?   1 6                                        
A   3,048   88,955 6 4,586 4,781 1 12,330   2 2 3   1 7,783 2 4 16,350 36,472 35,943 1 2
C 1,087 1,145 1 1 15,323 4   3,904 1,814 1 3 1 128 5 2     2,832 6,409   6 1,753 7,510
D 17 3,379 1 4,425   39,422 22,486 2 12,829 5,818 2 5 5 2 29,495 2 2 33 3 3 5,335 2 9,162
E 3,992 4,480 1 5,845 1 27,802 42,986 7 12,451   3 34,769 1   1 3 9,927 50 1 2 7,637   1
F 43 2,852     3,207 2 1 38,134 1 3 5,454 3 19,654 1 4 2   2 5,828 3 4,932 6 6,045
G 1,376 4,226 2 8,834 5,896 13,393 14,700 4 77,969 1 2 7 2 2   1 1 22,446 15,976 1 8,963 1,485  
H 2 1,418   3 1 3,038 1 2   18,000 7   3,555   5,331 2,261 8,622 5,360 5 8 2   11,384
I 4 3,022   1   22 4 5,737 8 4 58,872 2,086 10,039 9,301 4,587   5 1,758 3,443 13,587 21,858   33
K 3,152 4,538   3 1 2 13,944 2 4   4,781 42,385 1 4,887 23,710 2 7,523 14,692 42 8,365   1 2
L 2,479 4,944   7 33 3 2 33,204   3,824 14,294 3 141,974 6,265 8 6,635 2,905 4,895 6,471 14 16,522 1,688 43
M 2 1,690   1   7   1   10 20,531 2,629 7,807 207 312 1 1 1,740 31 5,507 6,264   12
N 7 2,975   3 1 10,742 14     4,796 6,794 18,366 5 21 39,406 1 10 49 15,395 6,675 2   6,579
P 2 3,242   7,039 1   1 3 5 4,580     25,653   4 73,097 5,653 6,781 27,546 7,971 1    
Q 6,051 2,130   12     8,102     11,645 3 8,404 6,464   3 3,585 23,583 7,251 4 6      
R 2,965 3,122 4 14 9,882 2 9 2 9,244 10,812 3,700 17,670 5,773 2,082 27 3,442 11,722 63,790 9,318 4,168 4 5,278 3
S 2,765 6,379 1 8,980 10,450 12 7 17,708 6,328 1 5,496 124 19,293 29 17,291 12,960 7 10,990 115,557 17,733 15 1,369 6,982
T 5 3,282   15,936   18 2   3 13 25,773 6,530 10 7,748 7,041 4,933 2 4,551 17,890 77,778 7 1 7
V 8 3,722 1 16,781 15 2,992 3,302 8,873 6,338   37,708 4 20,190 10,080 2 2 2 12 31 4 86,906   1
W 4,659 652     2,215   2 6 777   1   2,054 7   3   2,382 1,187 2 2 91 26
Y 3,403 1,674   3 5,523 2,556 1 6,993 5 5,343 17   182   4,548 3   2 2,971   6 2 26,697

Variants by chromosome

		

		1, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000
1,Count,77052,66823,64002,72855,81237,75974,75979,89192,89501,89391,107911,151377,168212,207375,92598,104521,212386,171473,123755,123302,89747,146607,157331,147633,145326,105738,109006,82600,83780,84637,28946

	
		

		2, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000
2,Count,6765,13627,14365,14434,14171,12596,17338,16236,15031,12903,17825,17325,17836,19819,20410,17952,17483,17433,14726,18269,18636,22476,23625,22831,23438,18342,14375,22614,23308,19466,19204,16835,5104,169,105,19074,13785,22542,23097,22613,24269,24879,20561,23962,19306,20219,19765,24867,24498,22301,26717,23373,18719,30661,25423,17085,17909,20891,21718,19095,21621,20994,17059,18146,22021,18094,17085,19803,17666,17889,14440,15418,16639,13096,11646,12372,12539,10967,12768,12096,13198,10447,11049,10891,11598,12425,9117,8730,10474,9594,9055,8214,9996,10730,10981,11656,10753,13654,11489,13104,10684,14108,14066,12343,12739,14857,12707,11694,10215,8716,10762,9988,8510,10247,7472,10114,10311,10670,9166,9137,7475,10542,9971,11312,12467,8418,9673,9564,10384,8788,8466,7528,7072,7344,6896,6513,7622,7623,7638,7732,7691,6298,7046,6503,7597,7583,7416,6496,7137,6948,7446,7993,6781,8518,6995,7054,6444,7748,8450,8186,8142,6806,7616,8223,7312,7840,8409,8737,7600,7091,6575,7940,8877,7747,7905,6786,8128,6875,7834,8077,7695,7526,8292,8121,7768,6983,7145,6854,7604,6829,10009,8169,7997,8140,7555,6434,5318

	
		

		3, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000
3,Count,7556,7542,7019,7019,6881,7115,7101,6443,8347,7560,8682,7163,7491,6955,7948,6646,7352,7292,7500,8043,6914,6763,6570,7095,6053,5862,6685,6500,7242,7831,8181,6877,6011,7647,11126,9319,8411,7147,6572,6344,6981,6679,8825,6172,7277,7069,6796,8650,8497,7909,6260,7489,8041,8286,8808,8188,9023,8057,9316,8606,7130,7733,7945,8370,7997,8567,7202,8932,6225,7736,8039,7503,8635,9175,7345,8436,10625,10070,8914,10163,9374,11098,12341,12350,11645,9272,9181,8632,8821,13671,11348,14966,11796,14645,11140,12684,16203,12498,11356,11636,11840,14579,14308,14984,15916,13087,14921,15617,19145,22421,20576,26267,22745,25057,27728,23219,17237,27493,26841,13868,21932,26890,20913,30311,25765,27397,26745,23453,20816,15571,14440,20189,17192,18543,24435,18105,8216,1274,9887,17412,19342,13478,21606,15873,10260,19575,25457,29557,28218,30846,31308,33298,24176,29722,17845,25527,31212,23253,28413,29772,18452,22704,19906,22217,24956,25958,21063,19500,18248,20937,14893,18416,17998,16023,13982,13791,11958,10340,11137,12982,11205,10541,12486,10472,10102,13228,10577,11853,11773,9875,7904,7898,8630,7063,10546,10135,8971,9162,8148,8266,8082,6102,6913,8648,7764,8643,10233,10444,7640,7984,8126,7351,7466,7413,7828,8233,7736,6737,7873,7373,7944,7810,7651,7591,6802,6948,7398,7067,6345,6852,6701,7126,7602,6090,3032

	
		

		4, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000
4,Count,9228,12567,9765,10558,11860,12615,12907,12680,11317,12243,11842,10096,11973,10257,11023,14075,20318,14089,20569,22798,29979,20095,20722,21335,16166,17878,16565,14749,23738,11794,16501,21799,7773,24466,21854,20580,20556,19405,17128,12791,16263,15164,11830,9588,8371,8887,11970,15168,21197,20897,23647,18488,22607,18576,19266,19348,18998,16485,8570,13243,17262,19177,17215,18221,14562,14908,15044,16294,16121,17045,15895,15014,19324,19014,14282,18629,15742,17107,20714,18974,18527,15034,16216,15889,15833,14727,13035,16645,14984,16082,16271,15237,12101,17035,21934,18117,13891,15368,13055,14371,13082,13196,12534,12405,13466,10444,12417,15199,14749,15581,7274,10442,10903,8114,8321,9103,10660,11198,10270,10676,9952,9326,8806,9159,7838,7207,7157,6860,8605,7779,7429,7960,8541,7429,7104,6946,6949,6969,7688,6779,6369,7899,8278,8024,7525,8055,7146,6198,7281,6716,6023,5354,5962,7288,7170,5723,6216,5623,6266,6743,6322,5775,8501,7279,5905,8258,6701,8476,7344,7545,8118,9152,9413,8833,8054,10207,8311,8995,8008,5391,6883,7511,8319,7216,8914,6924

	
		

		5, Position,0,100000,200000,300000,400000,500000,600000,700000,800000,900000,1000000,1100000,1200000,1300000,1400000,1500000,1600000,1700000,1800000,1900000,2000000,2100000,2200000,2300000,2400000,2500000,2600000,2700000,2800000,2900000,3000000,3100000,3200000,3300000,3400000,3500000,3600000,3700000,3800000,3900000,4000000,4100000,4200000,4300000,4400000,4500000,4600000,4700000,4800000,4900000,5000000,5100000,5200000,5300000,5400000,5500000,5600000,5700000,5800000,5900000,6000000,6100000,6200000,6300000,6400000,6500000,6600000,6700000,6800000,6900000,7000000,7100000,7200000,7300000,7400000,7500000,7600000,7700000,7800000,7900000,8000000,8100000,8200000,8300000,8400000,8500000,8600000,8700000,8800000,8900000,9000000,9100000,9200000,9300000,9400000,9500000,9600000,9700000,9800000,9900000,10000000,10100000,10200000,10300000,10400000,10500000,10600000,10700000,10800000,10900000,11000000,11100000,11200000,11300000,11400000,11500000,11600000,11700000,11800000,11900000,12000000,12100000,12200000,12300000,12400000,12500000,12600000,12700000,12800000,12900000,13000000,13100000,13200000,13300000,13400000,13500000,13600000,13700000,13800000,13900000,14000000,14100000,14200000,14300000,14400000,14500000,14600000,14700000,14800000,14900000,15000000,15100000,15200000,15300000,15400000,15500000,15600000,15700000,15800000,15900000,16000000,16100000,16200000,16300000,16400000,16500000,16600000,16700000,16800000,16900000,17000000,17100000,17200000,17300000,17400000,17500000,17600000,17700000,17800000,17900000,18000000,18100000,18200000,18300000,18400000,18500000,18600000,18700000,18800000,18900000,19000000,19100000,19200000,19300000,19400000,19500000,19600000,19700000,19800000,19900000,20000000,20100000,20200000,20300000,20400000,20500000,20600000,20700000,20800000,20900000,21000000,21100000,21200000,21300000,21400000,21500000,21600000,21700000,21800000,21900000,22000000,22100000,22200000,22300000,22400000,22500000,22600000,22700000,22800000,22900000,23000000,23100000,23200000,23300000,23400000,23500000,23600000,23700000,23800000,23900000,24000000,24100000,24200000,24300000,24400000,24500000,24600000,24700000,24800000,24900000,25000000,25100000,25200000,25300000,25400000,25500000,25600000,25700000,25800000,25900000,26000000,26100000,26200000,26300000,26400000,26500000,26600000,26700000,26800000,26900000
5,Count,9013,9753,8361,9347,10813,10650,8235,11178,10542,8922,9367,8456,7944,7542,7587,7694,6428,8133,7253,7007,7021,6077,7330,7930,6018,6064,6130,4853,7316,6012,7648,7311,5685,7574,6350,8785,7246,7325,7257,8107,6066,5835,5884,4523,4987,6109,7141,6784,6833,8155,7384,6507,8111,7155,7129,7945,9401,8734,9104,8865,8257,6770,7546,9020,11521,6592,7255,7519,8561,7804,12072,8817,8063,9581,10170,7898,8878,10164,11058,9951,11602,12411,13028,10600,10335,12885,11832,12171,11186,10601,13654,13344,15388,17037,14321,11871,13034,14142,19906,21970,21031,19394,20393,8911,17561,23990,20966,19187,19819,18424,18752,15195,9743,18514,21791,20452,11763,6897,2837,7868,12587,12312,20759,17198,13509,18267,16477,14906,3017,17278,18707,19450,9584,19340,14118,19368,21079,19378,17405,15462,16341,14237,17085,6176,35,9768,16137,14929,15076,14950,17749,16330,18762,16986,15432,15262,9910,13858,15228,14859,14752,16127,13283,13243,11312,13203,17895,14604,15762,14760,17942,16612,17462,18739,20508,18531,15860,13815,14155,15554,13999,11110,12986,12452,12314,14680,12403,12505,10489,12922,10581,11821,9216,8481,14169,11380,13351,13075,10303,9888,9931,8904,9731,9079,8931,7547,7295,9101,7629,8768,8838,10013,8996,9847,10363,9126,8639,8564,10974,11196,9590,12308,13231,10389,7904,9302,9770,8511,10182,8686,8819,7973,8055,8531,6406,7111,6696,6466,8431,9723,9187,8892,6619,8393,7143,6859,6693,7237,6004,8064,7973,7916,8648,7920,8036,7066,6896,7119,7978,7539,8801,8182,9295,7613,7799,9292,8885,7594,7356,6181
Details by gene

Here you can find a tab-separated table.